BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041034
(701 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 159/323 (49%), Gaps = 7/323 (2%)
Query: 76 GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGTTPIEIGSLR 134
G IPP L +L+YL+L N TG IP + G+ L L LS N +G P GS
Sbjct: 258 GPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 315
Query: 135 NLEELYLRSNKLSGVLPQE-IGNLKSLIWLSVMYNTVGGPIPSTLFRLT-NLERLFLGCN 192
LE L L SN SG LP + + ++ L L + +N G +P +L L+ +L L L N
Sbjct: 316 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 375
Query: 193 QFNGTI-PREIGNLKN-LTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEI 250
F+G I P N KN L L + N TG IP TL + + L+ L LSFN L IP +
Sbjct: 376 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Query: 251 GNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLS 310
G+ S L +L L N + G IP E G+IP + NL + LS
Sbjct: 436 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 495
Query: 311 KNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTL 370
N+L+G P IG L L L++NS G IP E+G L LDL+ N +GTIP +
Sbjct: 496 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Query: 371 HPMFLDMSFNNLEGEIPTYLRDN 393
++ N + G+ Y++++
Sbjct: 556 FKQSGKIAANFIAGKRYVYIKND 578
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 173/401 (43%), Gaps = 81/401 (20%)
Query: 75 SGSIPPQIGSLS-NLKYLNLRWNNLTGTI-PKEIGSLRN-LEVLYLSNNSLHGTTPIEIG 131
SG +P + +LS +L L+L NN +G I P + +N L+ LYL NN G P +
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 132 SLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGC 191
+ L L+L N LSG +P +G+L L L + N + G IP L + LE L L
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 472
Query: 192 NQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIG 251
N G IP + N NL +S+ N+LTG IP +G L +L L LS N IP E+G
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 532
Query: 252 NFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIP--FAIGKLFNLVSLDL 309
+ +L LDL+ N G IP G+I F GK + + D
Sbjct: 533 DCRSLIWLDLNTNLFNGTIP-------------AAMFKQSGKIAANFIAGKRYVYIKNDG 579
Query: 310 SK--------------------NKLSGSFPTGI-------------GNCTELQHLALNHN 336
K N+LS P I N + L +++N
Sbjct: 580 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 639
Query: 337 SLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPM----FLDMSFNNLEGEIPTY--- 389
L G IP EIG + L L+L HN++SG+IP + + LD+S N L+G IP
Sbjct: 640 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Query: 390 --------LRDN---------------PPNSFVGNKGLCGH 407
L +N PP F+ N GLCG+
Sbjct: 700 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 740
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 163/375 (43%), Gaps = 70/375 (18%)
Query: 81 QIGSLSNLKYLNLRWNNLTGTIPKEIGS---LRNLEVLYLSNNSLHGTT----------- 126
+GS S LK+LN+ N L P ++ L +LEVL LS NS+ G
Sbjct: 118 SLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 175
Query: 127 --------------PIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGG 172
+++ NLE L + SN S +P +G+ +L L + N + G
Sbjct: 176 ELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 234
Query: 173 PIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTL-GHLTS 231
+ T L+ L + NQF G IP LK+L +LS+ NK TG IP L G +
Sbjct: 235 DFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDT 292
Query: 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIP-DEXXXXXXXXXXXXXXXXX 290
L LDLS N + +P G+ S L L LS N G +P D
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 291 XGQIPFAIGKL-FNLVSLDLSKNKLS--------------------------GSFPTGIG 323
G++P ++ L +L++LDLS N S G P +
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 324 NCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPM------TLHPMFLDM 377
NC+EL L L+ N L GTIP +G + L++L L N L G IP TL + LD
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD- 471
Query: 378 SFNNLEGEIPTYLRD 392
FN+L GEIP+ L +
Sbjct: 472 -FNDLTGEIPSGLSN 485
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 159/342 (46%), Gaps = 50/342 (14%)
Query: 86 SNLKYLNLRWNNLTG--TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIG-SLRNLEELYLR 142
++L L+L N+L+G T +GS L+ L +S+N+L + G L +LE L L
Sbjct: 97 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 156
Query: 143 SNKLSG------VLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG 196
+N +SG VL G LK L ++ N + G + + R NLE L + N F+
Sbjct: 157 ANSISGANVVGWVLSDGCGELKHL---AISGNKISGDV--DVSRCVNLEFLDVSSNNFST 211
Query: 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSAL 256
IP +G+ L HL I NKL+G + T L L++S NQ IP +L
Sbjct: 212 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSL 268
Query: 257 AELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSG 316
L L++NK G IPD F G L LDLS N G
Sbjct: 269 QYLSLAENKFTGEIPD-----------------------FLSGACDTLTGLDLSGNHFYG 305
Query: 317 SFPTGIGNCTELQHLALNHNSLDGTIPPE-IGKILLLQNLDLSHNNLSGTIPMTLHPM-- 373
+ P G+C+ L+ LAL+ N+ G +P + + K+ L+ LDLS N SG +P +L +
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 374 ---FLDMSFNNLEGEIPTYLRDNPPNS----FVGNKGLCGHV 408
LD+S NN G I L NP N+ ++ N G G +
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 407
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 115 LYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP--QEIGNLKSLIWLSVMYNTVGG 172
L+LSN+ ++G+ +L L L N LSG + +G+ L +L+V NT+
Sbjct: 79 LFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDF 137
Query: 173 PIP-STLFRLTNLERLFLGCNQFNGT------IPREIGNLKNLTHLSIITNKLTGAIPST 225
P S +L +LE L L N +G + G LK HL+I NK++G +
Sbjct: 138 PGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK---HLAISGNKISGDV--D 192
Query: 226 LGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXX 285
+ +L +LD+S N + IP +G+ SAL LD+S NK+ G
Sbjct: 193 VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 251
Query: 286 XXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGI-GNCTELQHLALNHNSLDGTIPP 344
G IP L +L L L++NK +G P + G C L L L+ N G +PP
Sbjct: 252 SSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 309
Query: 345 EIGKILLLQNLDLSHNNLSGTIPM-TLHPM----FLDMSFNNLEGEIPTYLRD 392
G LL++L LS NN SG +PM TL M LD+SFN GE+P L +
Sbjct: 310 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 362
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 75 SGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR 134
SG IP +IGS+ L LNL N+++G+IP E+G LR L +L LS+N L G P + +L
Sbjct: 642 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 701
Query: 135 NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNT--VGGPIP 175
L E+ L +N LSG +P E+G ++ + N G P+P
Sbjct: 702 MLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNNPGLCGYPLP 743
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 159/323 (49%), Gaps = 7/323 (2%)
Query: 76 GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGTTPIEIGSLR 134
G IPP L +L+YL+L N TG IP + G+ L L LS N +G P GS
Sbjct: 261 GPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318
Query: 135 NLEELYLRSNKLSGVLPQE-IGNLKSLIWLSVMYNTVGGPIPSTLFRLT-NLERLFLGCN 192
LE L L SN SG LP + + ++ L L + +N G +P +L L+ +L L L N
Sbjct: 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSN 378
Query: 193 QFNGTI-PREIGNLKN-LTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEI 250
F+G I P N KN L L + N TG IP TL + + L+ L LSFN L IP +
Sbjct: 379 NFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Query: 251 GNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLS 310
G+ S L +L L N + G IP E G+IP + NL + LS
Sbjct: 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 498
Query: 311 KNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTL 370
N+L+G P IG L L L++NS G IP E+G L LDL+ N +GTIP +
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Query: 371 HPMFLDMSFNNLEGEIPTYLRDN 393
++ N + G+ Y++++
Sbjct: 559 FKQSGKIAANFIAGKRYVYIKND 581
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 173/401 (43%), Gaps = 81/401 (20%)
Query: 75 SGSIPPQIGSLS-NLKYLNLRWNNLTGTI-PKEIGSLRN-LEVLYLSNNSLHGTTPIEIG 131
SG +P + +LS +L L+L NN +G I P + +N L+ LYL NN G P +
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 132 SLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGC 191
+ L L+L N LSG +P +G+L L L + N + G IP L + LE L L
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
Query: 192 NQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIG 251
N G IP + N NL +S+ N+LTG IP +G L +L L LS N IP E+G
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 535
Query: 252 NFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIP--FAIGKLFNLVSLDL 309
+ +L LDL+ N G IP G+I F GK + + D
Sbjct: 536 DCRSLIWLDLNTNLFNGTIP-------------AAMFKQSGKIAANFIAGKRYVYIKNDG 582
Query: 310 SK--------------------NKLSGSFPTGI-------------GNCTELQHLALNHN 336
K N+LS P I N + L +++N
Sbjct: 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 642
Query: 337 SLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPM----FLDMSFNNLEGEIPTY--- 389
L G IP EIG + L L+L HN++SG+IP + + LD+S N L+G IP
Sbjct: 643 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Query: 390 --------LRDN---------------PPNSFVGNKGLCGH 407
L +N PP F+ N GLCG+
Sbjct: 703 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 163/375 (43%), Gaps = 70/375 (18%)
Query: 81 QIGSLSNLKYLNLRWNNLTGTIPKEIGS---LRNLEVLYLSNNSLHGTT----------- 126
+GS S LK+LN+ N L P ++ L +LEVL LS NS+ G
Sbjct: 121 SLGSCSGLKFLNVSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 178
Query: 127 --------------PIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGG 172
+++ NLE L + SN S +P +G+ +L L + N + G
Sbjct: 179 ELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 237
Query: 173 PIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTL-GHLTS 231
+ T L+ L + NQF G IP LK+L +LS+ NK TG IP L G +
Sbjct: 238 DFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFLSGACDT 295
Query: 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIP-DEXXXXXXXXXXXXXXXXX 290
L LDLS N + +P G+ S L L LS N G +P D
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 291 XGQIPFAIGKL-FNLVSLDLSKNKLS--------------------------GSFPTGIG 323
G++P ++ L +L++LDLS N S G P +
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 324 NCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPM------TLHPMFLDM 377
NC+EL L L+ N L GTIP +G + L++L L N L G IP TL + LD
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD- 474
Query: 378 SFNNLEGEIPTYLRD 392
FN+L GEIP+ L +
Sbjct: 475 -FNDLTGEIPSGLSN 488
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 159/342 (46%), Gaps = 50/342 (14%)
Query: 86 SNLKYLNLRWNNLTGTIPK--EIGSLRNLEVLYLSNNSLHGTTPIEIG-SLRNLEELYLR 142
++L L+L N+L+G + +GS L+ L +S+N+L + G L +LE L L
Sbjct: 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159
Query: 143 SNKLSG------VLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG 196
+N +SG VL G LK L ++ N + G + + R NLE L + N F+
Sbjct: 160 ANSISGANVVGWVLSDGCGELKHL---AISGNKISGDV--DVSRCVNLEFLDVSSNNFST 214
Query: 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSAL 256
IP +G+ L HL I NKL+G + T L L++S NQ IP +L
Sbjct: 215 GIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSL 271
Query: 257 AELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSG 316
L L++NK G IPD F G L LDLS N G
Sbjct: 272 QYLSLAENKFTGEIPD-----------------------FLSGACDTLTGLDLSGNHFYG 308
Query: 317 SFPTGIGNCTELQHLALNHNSLDGTIPPE-IGKILLLQNLDLSHNNLSGTIPMTLHPM-- 373
+ P G+C+ L+ LAL+ N+ G +P + + K+ L+ LDLS N SG +P +L +
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 374 ---FLDMSFNNLEGEIPTYLRDNPPNS----FVGNKGLCGHV 408
LD+S NN G I L NP N+ ++ N G G +
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 410
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 24/293 (8%)
Query: 115 LYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP--QEIGNLKSLIWLSVMYNTVGG 172
L+LSN+ ++G+ +L L L N LSG + +G+ L +L+V NT+
Sbjct: 82 LFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDF 140
Query: 173 PIP-STLFRLTNLERLFLGCNQFNGT------IPREIGNLKNLTHLSIITNKLTGAIPST 225
P S +L +LE L L N +G + G LK HL+I NK++G +
Sbjct: 141 PGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK---HLAISGNKISGDV--D 195
Query: 226 LGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXX 285
+ +L +LD+S N + IP +G+ SAL LD+S NK+ G
Sbjct: 196 VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254
Query: 286 XXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGI-GNCTELQHLALNHNSLDGTIPP 344
G IP L +L L L++NK +G P + G C L L L+ N G +PP
Sbjct: 255 SSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312
Query: 345 EIGKILLLQNLDLSHNNLSGTIPM-TLHPM----FLDMSFNNLEGEIPTYLRD 392
G LL++L LS NN SG +PM TL M LD+SFN GE+P L +
Sbjct: 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 365
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 75 SGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR 134
SG IP +IGS+ L LNL N+++G+IP E+G LR L +L LS+N L G P + +L
Sbjct: 645 SGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALT 704
Query: 135 NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNT--VGGPIP 175
L E+ L +N LSG +P E+G ++ + N G P+P
Sbjct: 705 MLTEIDLSNNNLSGPIP-EMGQFETFPPAKFLNNPGLCGYPLP 746
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 444 DLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVL 503
+L A+++F + +G GG+G VYK L DG +VA+K+L + T+ FQ E ++
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL--QFQTEVEMI 81
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE-LNWTRRVNIVKSVA 562
S HRN+++L GFC+ +Y YM GS+ LR+ E+ L+W +R I A
Sbjct: 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL-----HVDSSNRTLRAG 617
L+YLH C P I+HRD EA V DFG A+L+ HV + R G
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR----G 197
Query: 618 TYGYIAPD 625
G+IAP+
Sbjct: 198 XIGHIAPE 205
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 12/188 (6%)
Query: 444 DLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVL 503
+L A+++F + +G GG+G VYK L DG +VA+K+L + + FQ E ++
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL--QFQTEVEMI 89
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE-LNWTRRVNIVKSVA 562
S HRN+++L GFC+ +Y YM GS+ LR+ E+ L+W +R I A
Sbjct: 90 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 149
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL-----HVDSSNRTLRAG 617
L+YLH C P I+HRD EA V DFG A+L+ HV + R G
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR----G 205
Query: 618 TYGYIAPD 625
T G+IAP+
Sbjct: 206 TIGHIAPE 213
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 117/245 (47%), Gaps = 16/245 (6%)
Query: 173 PIPSTLFRLTNLERLFLG-CNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTS 231
PIPS+L L L L++G N G IP I L L +L I ++GAIP L + +
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEX-XXXXXXXXXXXXXXXX 290
L+ LD S+N L +P I + L + N+I G IPD
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 291 XGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKIL 350
G+IP L NL +DLS+N L G G+ Q + L NSL ++GK+
Sbjct: 187 TGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF----DLGKVG 241
Query: 351 LLQN---LDLSHNNLSGTIPMTLHPM----FLDMSFNNLEGEIPT--YLRDNPPNSFVGN 401
L +N LDL +N + GT+P L + L++SFNNL GEIP L+ +++ N
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
Query: 402 KGLCG 406
K LCG
Sbjct: 302 KCLCG 306
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 22 TSDHCN--WVGITCDYKGSITHIELVECS---------IKGELGSLNFSCFPXXXXXXXX 70
T+D CN W+G+ CD + ++ S I L +L + F
Sbjct: 30 TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF----LYIGG 85
Query: 71 XXXXSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEI 130
G IPP I L+ L YL + N++G IP + ++ L L S N+L GT P I
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 131 GSLRNLEELYLRSNKLSGVLPQEIGNLKSLIW-LSVMYNTVGGPIPSTLFRLTNLERLFL 189
SL NL + N++SG +P G+ L +++ N + G IP T L NL + L
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDL 204
Query: 190 GCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLE 249
N G G+ KN + + N L + +G +L LDL N+++ +P
Sbjct: 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQG 263
Query: 250 IGNFSALAELDLSDNKIRGIIP 271
+ L L++S N + G IP
Sbjct: 264 LTQLKFLHSLNVSFNNLCGEIP 285
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 27/127 (21%)
Query: 75 SGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSL------------ 122
+G IPP +L NL +++L N L G GS +N + ++L+ NSL
Sbjct: 187 TGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKN 245
Query: 123 -----------HGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNT-- 169
+GT P + L+ L L + N L G +PQ GNL+ + N
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCL 304
Query: 170 VGGPIPS 176
G P+P+
Sbjct: 305 CGSPLPA 311
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 8/210 (3%)
Query: 426 SENLKLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQS 485
+ENL G DG +D+ D +I+ IG G +G+V++AE G VA+K L +
Sbjct: 18 TENLYF-QGAMDG----DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQ 71
Query: 486 ETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDE 545
+ + V F E ++ +RH NIV G + + EY+ RGSL+ +L
Sbjct: 72 DFH-AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 546 AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL 605
+L+ RR+++ VA ++YLH+ P IVHRD V DFG +RL
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK 189
Query: 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQK 635
AGT ++AP+ P N+K
Sbjct: 190 ASXFLXSKXAAGTPEWMAPEVLRDEPSNEK 219
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 444 DLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVL 503
DL AT +F ++ IG G +G VYK L DG VALK+ E S +E F+ E L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETL 89
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDD-EAIELNWTRRVNIVKSVA 562
S RH ++V L GFC + M IY+YME G+L L D + ++W +R+ I A
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL-LHVDSSN-RTLRAGTYG 620
L YLH T +I+HRD + DFG ++ +D ++ + GT G
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 621 YIAPDQRLSPPVNQK 635
YI P+ + + +K
Sbjct: 207 YIDPEYFIKGRLTEK 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 8/210 (3%)
Query: 426 SENLKLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQS 485
+ENL G DG +D+ D +I+ IG G +G+V++AE G VA+K L +
Sbjct: 18 TENLYF-QGAMDG----DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQ 71
Query: 486 ETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDE 545
+ + V F E ++ +RH NIV G + + EY+ RGSL+ +L
Sbjct: 72 DFH-AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 546 AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL 605
+L+ RR+++ VA ++YLH+ P IVHR+ V DFG +RL
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189
Query: 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQK 635
+ AGT ++AP+ P N+K
Sbjct: 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY RG ++ L+ + + + R + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 181
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 148
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 202
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 9/195 (4%)
Query: 444 DLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVL 503
DL AT +F ++ IG G +G VYK L DG VALK+ E S +E F+ E L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR---RTPESSQGIEEFETEIETL 89
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDD-EAIELNWTRRVNIVKSVA 562
S RH ++V L GFC + M IY+YME G+L L D + ++W +R+ I A
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL-LHVDSSN-RTLRAGTYG 620
L YLH T +I+HRD + DFG ++ + ++ + GT G
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 621 YIAPDQRLSPPVNQK 635
YI P+ + + +K
Sbjct: 207 YIDPEYFIKGRLTEK 221
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 139
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 140 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 193
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 176
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPE 176
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 126
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 180
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 181
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 179
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 121
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 122 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 175
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + H SS RT +GT Y+ P+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPE 177
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 179
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 181
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPE 176
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY RG ++ L+ + + + R + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPE 181
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPE 176
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPE 177
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 119
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 120 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 173
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPE 181
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPE 176
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A + K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 123 YCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPE 176
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPE 179
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +A+FG + +H SS RT GT Y+ P+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPE 179
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPE 178
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPE 176
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPE 176
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +A+FG + +H SS RT GT Y+ P+
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPE 178
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPE 177
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPE 179
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 148
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPE 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTV 506
A EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
RH NI++LYG+ ++ I EY G+++ R+ + + + R + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPE 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI++LYG+ ++ I EY G+++ R+ + + R + +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYC 128
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD E +ADFG + +H SS RT GT Y+ P+
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPE 180
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I +G G +G+VY A K ++ALK L +++ E + + E + S +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI++LYG+ ++ I EY G+++ R+ + + R + +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYC 128
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD E +ADFG + +H SS R GT Y+ P+
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPE 180
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+DF I +G G +G+VY A E +VALK L +S+ E + E + + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI++LY + +R ++ I EY RG L+ L+ ++ + R I++ +A AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATIMEELADALMYC 139
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H ++HRD E +ADFG + +H S R GT Y+ P+
Sbjct: 140 H---GKKVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPE 191
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG GG+G VY+A +V H + + S +E+ + EA++ + ++H NI+ L G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 518 CLHKRCMFFIYEYMERGSLFYVL--RDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
CL + + + E+ G L VL + I +NW + +A ++YLH +
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIVP 128
Query: 576 IVHRDXXXXXXXXXXXXE--------AFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
I+HRD E + DFG AR H + + AG Y ++AP+
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--RTTKMSAAGAYAWMAPE 184
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+DF I +G G +G+VY A K ++ALK L +S+ E + E + S +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI+++Y + ++ ++ + E+ RG L+ L+ E R ++ +A AL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 131
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H ++HRD E +ADFG + +H S R GT Y+ P+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPE 183
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+DF I +G G +G+VY A K ++ALK L +S+ E + E + S +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI+++Y + ++ ++ + E+ RG L+ L+ E R ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 130
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H ++HRD E +ADFG + +H S R GT Y+ P+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPE 182
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+DF I +G G +G+VY A K ++ALK L +S+ E + E + S +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI+++Y + ++ ++ + E+ RG L+ L+ E R ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALHYC 130
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H ++HRD E +ADFG + +H S R GT Y+ P+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPE 182
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + +G G +G V KA+ K VA+K++ +SE+E AF+ E R LS V H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFI----VELRQLSRVNHP 62
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKLYG CL+ C+ + EY E GSL+ VL + ++ + ++YLH
Sbjct: 63 NIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAF-VADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+++HRD + DFGTA + +N G+ ++AP+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPE 174
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 12/177 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + +G G +G V KA+ K VA+K++ +SE+E AF+ E R LS V H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFI----VELRQLSRVNHP 61
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKLYG CL+ C+ + EY E GSL+ VL + ++ + ++YLH
Sbjct: 62 NIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAF-VADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+++HRD + DFGTA + +N G+ ++AP+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPE 173
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 18/178 (10%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKL----HQSETEDSAFVESFQNEARVLSTVRHRNIV 512
IG GG+G V+K L D VVA+K L + ETE + FQ E ++S + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
KLYG + M + E++ G L++ L D+A + W+ ++ ++ +A + Y+ +
Sbjct: 87 KLYGLMHNPPRM--VMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQ- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXE-----AFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
P IVHRD E A VADFGT++ V S + L G + ++AP+
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-QSVHSVSGLL--GNFQWMAPE 196
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 442 YEDLINATEDFHIRYC------IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVES 495
+ +L N T +F R +G GG+G VYK + + V K + +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 76
Query: 496 FQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV 555
F E +V++ +H N+V+L GF + +Y YM GSL L D L+W R
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH--VDSSNRT 613
I + A+ +++LH + +HRD A ++DFG AR + +
Sbjct: 137 KIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 614 LRAGTYGYIAPD 625
GT Y+AP+
Sbjct: 194 RIVGTTAYMAPE 205
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 18/178 (10%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKL----HQSETEDSAFVESFQNEARVLSTVRHRNIV 512
IG GG+G V+K L D VVA+K L + ETE + FQ E ++S + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
KLYG + M + E++ G L++ L D+A + W+ ++ ++ +A + Y+ +
Sbjct: 87 KLYGLMHNPPRM--VMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQ- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXE-----AFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
P IVHRD E A VADFG ++ V S + L G + ++AP+
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSVSGLL--GNFQWMAPE 196
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 11/192 (5%)
Query: 442 YEDLINATEDFHIRYC------IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVES 495
+ +L N T +F R +G GG+G VYK + + V K + +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 76
Query: 496 FQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV 555
F E +V++ +H N+V+L GF + +Y YM GSL L D L+W R
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH--VDSSNRT 613
I + A+ +++LH + +HRD A ++DFG AR +
Sbjct: 137 KIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 614 LRAGTYGYIAPD 625
GT Y+AP+
Sbjct: 194 RIVGTTAYMAPE 205
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G G +G K + G+V+ +K+L + + E +F E +V+ + H N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCLEHPNVLKFIG 74
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+ + FI EY++ G+L +++ D + W++RV+ K +A ++YLH + +I
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLH---SMNI 129
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
+HRD VADFG ARL+ VD +T G PD++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLM-VDE--KTQPEGLRSLKKPDRK 177
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 11/192 (5%)
Query: 442 YEDLINATEDFHIRYC------IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVES 495
+ +L N T +F R +G GG+G VYK + + V K + +
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 70
Query: 496 FQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV 555
F E +V++ +H N+V+L GF + +Y YM GSL L D L+W R
Sbjct: 71 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 130
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
I + A+ +++LH + +HRD A ++DFG AR +
Sbjct: 131 KIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 616 --AGTYGYIAPD 625
GT Y+AP+
Sbjct: 188 RIVGTTAYMAPE 199
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G YG VYKA+ G++VALK++ + + ED + E +L + H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR--RVNIVKSVAHALSYLHHDCTPS 575
+RC+ ++E+ME+ L VL ++ ++ + + +++ VAH +
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------R 139
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
I+HRD +ADFG AR + + T T Y APD
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G YG VYKA+ G++VALK++ + + ED + E +L + H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR--RVNIVKSVAHALSYLHHDCTPS 575
+RC+ ++E+ME+ L VL ++ ++ + + +++ VAH +
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------R 139
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
I+HRD +ADFG AR + + T T Y APD
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKL----HQSETEDSAFVESFQNEARVLSTVRHRNIV 512
IG GG+G V+K L D VVA+K L + ETE + FQ E ++S + H NIV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
KLYG + M + E++ G L++ L D+A + W+ ++ ++ +A + Y+ +
Sbjct: 87 KLYGLMHNPPRM--VMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDIALGIEYMQNQ- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXE-----AFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
P IVHRD E A VADF ++ V S + L G + ++AP+
Sbjct: 142 NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-QSVHSVSGLL--GNFQWMAPE 196
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 44/282 (15%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ +L+NL L L N +T P + +L NL L LS+N++ + + L +L++L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSF 158
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
SN+++ + P + NL +L L + N V S L +LTNLE L NQ + P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 212
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
+G L NL LS+ N+L TL LT+L LDL+ NQ+ + PL + L EL L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKL 268
Query: 262 SDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTG 321
N+I I P + L L +L+L++N+L P
Sbjct: 269 GANQISNISP--------------------------LAGLTALTNLELNENQLEDISP-- 300
Query: 322 IGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLS 363
I N L +L L N++ P + + LQ L S+N +S
Sbjct: 301 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVS 340
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 22/281 (7%)
Query: 109 LRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L NL + SNN L TP++ +L L ++ + +N+++ + P + NL +L L++ N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGH 228
+ P L LTNL RL L N + + L +L LS +N++T P L +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 229 LTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXX 288
LT+L LD+S N++ L + L L ++N+I I P
Sbjct: 172 LTTLERLDISSNKVSDISVL--AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQL 229
Query: 289 XXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGK 348
G + L NL LDL+ N++S P + T+L L L N + P +
Sbjct: 230 KDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 281
Query: 349 ILLLQNLDLSHNNLSGTIPMT--LHPMFLDMSFNNLEGEIP 387
+ L NL+L+ N L P++ + +L + FNN+ P
Sbjct: 282 LTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 322
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 61/204 (29%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIG---SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
+G L+NL L+L N L K+IG SL NL L L+NN + P+ L L E
Sbjct: 213 LGILTNLDELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTE 265
Query: 139 LYLRSNKLSGVLP--------------------QEIGNLKSLIWLSVMYNTVGGPIP--- 175
L L +N++S + P I NLK+L +L++ +N + P
Sbjct: 266 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSS 325
Query: 176 -----------------STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
S+L LTN+ L G NQ + P + NL +T L +
Sbjct: 326 LTKLQRLFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 383
Query: 219 TGA---------IPSTLGHLTSLL 233
T A IP+T+ ++T L
Sbjct: 384 TNAPVNYKANVSIPNTVKNVTGAL 407
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 70
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 129
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ +HRD VADFG +RL+ D+ T AG
Sbjct: 130 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGA 173
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 133
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ +HRD VADFG +RL+ D+ T AG
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGA 177
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 70
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 129
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 130 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 166
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 434 GGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAF 492
G D Y+ D +++ +G G YG VY+ + VA+K L ED+
Sbjct: 1 GAMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTME 56
Query: 493 VESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWT 552
VE F EA V+ ++H N+V+L G C + + I E+M G+L LR+ + E+N
Sbjct: 57 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAV 115
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ + ++ A+ YL + +HRD VADFG +RL+ D+
Sbjct: 116 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 169
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 133
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 133
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 71
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 131 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 133
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 82
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 141
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 142 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 178
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 69
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 71
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 131 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 71
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 131 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 167
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 69
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E +H IG G YG VYKA+ G+ ALKK+ + E ED + E +L ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERG--SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
NIVKLY K+ + ++E++++ L V E++ + + + + ++Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAY 115
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H ++HRD E +ADFG AR + T T Y APD
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E +H IG G YG VYKA+ G+ ALKK+ + E ED + E +L ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERG--SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
NIVKLY K+ + ++E++++ L V E++ + + + + ++Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAY 115
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H ++HRD E +ADFG AR + T T Y APD
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLH---QSETEDSAFVESFQNEARVLS 504
ED+ + Y IGTG YG K DGK++ K+L +E E V +E +L
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV----SEVNLLR 60
Query: 505 TVRHRNIVKLYGFCLHKR--CMFFIYEYMERGSLFYVLRD---DDEAIELNWTRRVNIVK 559
++H NIV+ Y + + ++ + EY E G L V+ + + ++ + RV
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY 619
++A + D +++HRD + DFG AR+L+ D+S GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTP 180
Query: 620 GYIAPDQRLSPPVNQK 635
Y++P+Q N+K
Sbjct: 181 YYMSPEQMNRMSYNEK 196
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLH---QSETEDSAFVESFQNEARVLS 504
ED+ + Y IGTG YG K DGK++ K+L +E E V +E +L
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV----SEVNLLR 60
Query: 505 TVRHRNIVKLYGFCLHKR--CMFFIYEYMERGSLFYVLRD---DDEAIELNWTRRVNIVK 559
++H NIV+ Y + + ++ + EY E G L V+ + + ++ + RV
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY 619
++A + D +++HRD + DFG AR+L+ D+S GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTP 180
Query: 620 GYIAPDQRLSPPVNQK 635
Y++P+Q N+K
Sbjct: 181 YYMSPEQMNRMSYNEK 196
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E +H IG G YG VYKA+ G+ ALKK+ + E ED + E +L ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERG--SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
NIVKLY K+ + ++E++++ L V E++ + + + + ++Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAY 115
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H ++HRD E +ADFG AR + T T Y APD
Sbjct: 116 CHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 273
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 332
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HR+ VADFG +RL+ D+
Sbjct: 333 KK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 369
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ +L+NL L L N +T P + +L NL L LS+N++ + + L +L++L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSF 158
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
SN+++ + P + NL +L L + N V S L +LTNLE L NQ + P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 212
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
+G L NL LS+ N+L TL LT+L LDL+ NQ+ + PL + L EL L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKL 268
Query: 262 SDNKIRGIIP 271
N+I I P
Sbjct: 269 GANQISNISP 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 127/281 (45%), Gaps = 22/281 (7%)
Query: 109 LRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L NL + SNN L TP++ +L L ++ + +N+++ + P + NL +L L++ N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGH 228
+ P L LTNL RL L N + + L +L LS +N++T P L +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LAN 171
Query: 229 LTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXX 288
LT+L LD+S N++ L + L L ++N+I I P
Sbjct: 172 LTTLERLDISSNKVSDISVL--AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQL 229
Query: 289 XXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGK 348
G + L NL LDL+ N++S P + T+L L L N + P +
Sbjct: 230 KDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 281
Query: 349 ILLLQNLDLSHNNLSGTIPMT--LHPMFLDMSFNNLEGEIP 387
+ L NL+L+ N L P++ + +L + FNN+ P
Sbjct: 282 LTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 322
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 61/204 (29%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIG---SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
+G L+NL L+L N L K+IG SL NL L L+NN + P+ L L E
Sbjct: 213 LGILTNLDELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTE 265
Query: 139 LYLRSNKLSGVLP--------------------QEIGNLKSLIWLSVMYNTVGGPIP--- 175
L L +N++S + P I NLK+L +L++ +N + P
Sbjct: 266 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSS 325
Query: 176 -----------------STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
S+L LTN+ L G NQ + P + NL +T L +
Sbjct: 326 LTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 383
Query: 219 TGA---------IPSTLGHLTSLL 233
T A IP+T+ ++T L
Sbjct: 384 TNAPVNYKANVSIPNTVKNVTGAL 407
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GTG +G V + VA+K + + + F+E EA+V+ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
C +R +F I EYM G L LR+ + + + + K V A+ YL + +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 142
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
HRD V+DFG +R + D ++ G P R SPP
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV-----GSKFP-VRWSPP 190
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 315
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E+N + + ++ A+ YL
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLE 374
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HR+ VADFG +RL+ D+
Sbjct: 375 KK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 411
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 67
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 126
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ +HRD VADFG +RL+ D+ T AG
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGA 170
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 5/169 (2%)
Query: 459 GTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFC 518
G GG+G VYK + + V K + + F E +V + +H N+V+L GF
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 519 LHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVH 578
+ +Y Y GSL L D L+W R I + A+ +++LH + +H
Sbjct: 91 SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN---HHIH 147
Query: 579 RDXXXXXXXXXXXXEAFVADFGTARLLH--VDSSNRTLRAGTYGYIAPD 625
RD A ++DFG AR + GT Y AP+
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ +L+NL L L N +T P + +L NL L LS+N++ + + L +L++L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLNF 158
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
SN+++ + P + NL +L L + N V S L +LTNLE L NQ + P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 212
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
+G L NL LS+ N+L TL LT+L LDL+ NQ+ + PL + L EL L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKL 268
Query: 262 SDNKIRGIIP 271
N+I I P
Sbjct: 269 GANQISNISP 278
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 22/281 (7%)
Query: 109 LRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L NL + SNN L TP++ +L L ++ + +N+++ + P + NL +L L++ N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGH 228
+ P L LTNL RL L N + + L +L L+ +N++T P L +
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LAN 171
Query: 229 LTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXX 288
LT+L LD+S N++ L + L L ++N+I I P
Sbjct: 172 LTTLERLDISSNKVSDISVL--AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQL 229
Query: 289 XXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGK 348
G + L NL LDL+ N++S P + T+L L L N + P +
Sbjct: 230 KDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAG 281
Query: 349 ILLLQNLDLSHNNLSGTIPMT--LHPMFLDMSFNNLEGEIP 387
+ L NL+L+ N L P++ + +L + FNN+ P
Sbjct: 282 LTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 322
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 61/204 (29%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIG---SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
+G L+NL L+L N L K+IG SL NL L L+NN + P+ L L E
Sbjct: 213 LGILTNLDELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTE 265
Query: 139 LYLRSNKLSGVLP--------------------QEIGNLKSLIWLSVMYNTVGGPIP--- 175
L L +N++S + P I NLK+L +L++ +N + P
Sbjct: 266 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSS 325
Query: 176 -----------------STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
S+L LTN+ L G NQ + P + NL +T L +
Sbjct: 326 LTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 383
Query: 219 TGA---------IPSTLGHLTSLL 233
T A IP+T+ ++T L
Sbjct: 384 TNAPVNYKANVSIPNTVKNVTGAL 407
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GTG +G V + VA+K + + + F+E EA+V+ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
C +R +F I EYM G L LR+ + + + + K V A+ YL + +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 127
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
HRD V+DFG +R + +D + R + R SPP
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPV-----RWSPP 175
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF + +G G + VY+AE + G VA+K + + + V+ QNE ++ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
+I++LY + ++ + E G + L++ + N R + + + + YL
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYL 128
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD +ADFG A L + GT YI+P+
Sbjct: 129 H---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 133
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 134 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 170
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 69
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 67
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 126
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 163
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 69
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GTG +G V + VA+K + + + F+E EA+V+ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
C +R +F I EYM G L LR+ + + + + K V A+ YL + +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 142
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
HRD V+DFG +R + D ++ G P R SPP
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFP-VRWSPP 190
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 69
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 69
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 129 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GTG +G V + VA+K + + + F+E EA+V+ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
C +R +F I EYM G L LR+ + + + + K V A+ YL + +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 127
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
HRD V+DFG +R + D ++ G P R SPP
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFP-VRWSPP 175
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 457 CIGTGGYGSVYKAELP--DGKV---VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
IG G +G VYK L GK VA+K L TE F EA ++ H NI
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQFSHHNI 108
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD 571
++L G + M I EYME G+L LR+ D E + + V +++ +A + YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYL--- 163
Query: 572 CTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ VHRD V+DFG +R+L D
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GTG +G V + VA+K + + + F+E EA+V+ + H +V+LYG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 78
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
C +R +F I EYM G L LR+ + + + + K V A+ YL + +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 133
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
HRD V+DFG +R + D ++ G P R SPP
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFP-VRWSPP 181
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GTG +G V + VA+K + + + F+E EA+V+ + H +V+LYG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 71
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
C +R +F I EYM G L LR+ + + + + K V A+ YL + +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 126
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
HRD V+DFG +R + D ++ G P R SPP
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFP-VRWSPP 174
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GTG +G V + VA+K + + + F+E EA+V+ + H +V+LYG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 67
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
C +R +F I EYM G L LR+ + + + + K V A+ YL + +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ--QLLEMCKDVCEAMEYLE---SKQFL 122
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
HRD V+DFG +R + D ++ G P R SPP
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-----GSKFP-VRWSPP 170
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 10/179 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
ED + IG G +G V+ L D +VA+K ++ D F EAR+L H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD--LKAKFLQEARILKQYSH 171
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIV+L G C K+ ++ + E ++ G LR E L + +V A + YL
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR--LLHVDSSNRTLRAGTYGYIAPD 625
C +HRD ++DFG +R V +++ LR + AP+
Sbjct: 230 ESKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G +G VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 67
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 126
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ +HRD VADFG +RL+ D+ T AG
Sbjct: 127 KK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGA 170
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY+ + VA+K L ED+ VE F EA V+ ++H
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL----KEDTMEVEEFLKEAAVMKEIKHP 276
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + I E+M G+L LR+ + E++ + + ++ A+ YL
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLE 335
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HR+ VADFG +RL+ D+
Sbjct: 336 KK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
D +++ +G G YG VY + VA+K L ED+ VE F EA V+ ++H
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHP 88
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V+L G C + + + EYM G+L LR+ + E+ + + ++ A+ YL
Sbjct: 89 NLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYMATQISSAMEYLE 147
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS 609
+ +HRD VADFG +RL+ D+
Sbjct: 148 KK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT 184
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 100 GTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKS 159
++P I + N ++LYL +N + P SL NL+ELYL SN+L G LP +G S
Sbjct: 32 ASVPAGIPT--NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALP--VGVFDS 86
Query: 160 LIWLSVM-----YNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSI 213
L L+V+ TV +PS +F RL +L+ LF+ CN+ +PR I L +LTHL++
Sbjct: 87 LTQLTVLDLGTNQLTV---LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142
Query: 214 ITNKLTGAIPSTLGHLTSLLY 234
N+L L+SL +
Sbjct: 143 DQNQLKSIPHGAFDRLSSLTH 163
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 123 HGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMY---NTVGGPIPSTLF 179
H + P I + N + LYL N+++ + P G SLI L +Y N +G +P +F
Sbjct: 31 HASVPAGIPT--NAQILYLHDNQITKLEP---GVFDSLINLKELYLGSNQLGA-LPVGVF 84
Query: 180 -RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLS 238
LT L L LG NQ L +L L + NKLT +P + LT L +L L
Sbjct: 85 DSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALD 143
Query: 239 FNQLHSFIPLEIGNFSALAEL 259
NQL S IP G F L+ L
Sbjct: 144 QNQLKS-IPH--GAFDRLSSL 161
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 79 PPQIGSLSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137
P SL NLK L L N L G +P + SL L VL L N L L +L+
Sbjct: 57 PGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLK 115
Query: 138 ELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNG 196
EL++ NKL+ LP+ I L L L++ N + IP F RL++L +L N ++
Sbjct: 116 ELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKS-IPHGAFDRLSSLTHAYLFGNPWDC 173
Query: 197 TIPREIGNLKN 207
R+I L+N
Sbjct: 174 EC-RDIMYLRN 183
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 72/184 (39%), Gaps = 33/184 (17%)
Query: 182 TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP-STLGHLTSLLYLDLSFN 240
TN + L+L NQ P +L NL L + +N+L GA+P LT L LDL N
Sbjct: 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTN 98
Query: 241 QLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGK 300
QL L EL + NK+ ++P I +
Sbjct: 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-------------------------ELPRGIER 133
Query: 301 LFNLVSLDLSKNKLSGSFPTG-IGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSH 359
L +L L L +N+L S P G + L H L N D E I+ L+N H
Sbjct: 134 LTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDC----ECRDIMYLRNWVADH 188
Query: 360 NNLS 363
+++
Sbjct: 189 TSIA 192
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
ED + IG G +G V+ L D +VA+K ++ D F EAR+L H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD--LKAKFLQEARILKQYSH 171
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIV+L G C K+ ++ + E ++ G LR E L + +V A + YL
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
C +HRD ++DFG +R
Sbjct: 230 ESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 13/196 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLH---QSETEDSAFVESFQNEARVLS 504
ED+ + Y IGTG YG K DGK++ K+L +E E V +E +L
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV----SEVNLLR 60
Query: 505 TVRHRNIVKLYGFCLHKR--CMFFIYEYMERGSLFYVL-RDDDEAIELNWTRRVNIVKSV 561
++H NIV+ Y + + ++ + EY E G L V+ + E L+ + ++ +
Sbjct: 61 ELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120
Query: 562 AHALSYLHH--DCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY 619
AL H D +++HRD + DFG AR+L+ D GT
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTP 180
Query: 620 GYIAPDQRLSPPVNQK 635
Y++P+Q N+K
Sbjct: 181 YYMSPEQMNRMSYNEK 196
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G V+ AE D +VA+K L + D+A + F EA +L+ ++H +I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTL--KDASDNA-RKDFHREAELLTNLQHEHI 77
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLR----------DDDEAIELNWTRRVNIVKSV 561
VK YG C+ + ++EYM+ G L LR + + EL ++ ++I + +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGY 621
A + YL + VHRD + DFG +R ++ S R G G+
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY---STDYYRVG--GH 189
Query: 622 IAPDQRLSPP 631
R PP
Sbjct: 190 TMLPIRWMPP 199
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ + VA+K L AF+E EA ++ T++H +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYAV 76
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ ++ I EYM +GSL L+ DE ++ + ++ +A ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYI 132
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG AR+ ++ + T R G
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGA 171
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 451 DFHIRYCIGTGGYGSVYKAE----LP--DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
D +++ +G G +G V+ AE LP D +VA+K L E +SA + FQ EA +L+
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESA-RQDFQREAELLT 98
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR------------DDDEAIELNWT 552
++H++IV+ +G C R + ++EYM G L LR +D L
Sbjct: 99 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ + + VA + YL VHRD + DFG +R
Sbjct: 159 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ + VA+K L AF+E EA ++ T++H +V+LY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYAV 75
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ ++ I E+M +GSL L+ DE ++ + ++ +A ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLK-SDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYI 131
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG AR+ ++ + T R G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGA 170
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 451 DFHIRYCIGTGGYGSVYKAE----LP--DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
D +++ +G G +G V+ AE LP D +VA+K L E +SA + FQ EA +L+
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESA-RQDFQREAELLT 69
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR------------DDDEAIELNWT 552
++H++IV+ +G C R + ++EYM G L LR +D L
Sbjct: 70 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ + + VA + YL VHRD + DFG +R
Sbjct: 130 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 451 DFHIRYCIGTGGYGSVYKAE----LP--DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
D +++ +G G +G V+ AE LP D +VA+K L E +SA + FQ EA +L+
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESA-RQDFQREAELLT 75
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR------------DDDEAIELNWT 552
++H++IV+ +G C R + ++EYM G L LR +D L
Sbjct: 76 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ + + VA + YL VHRD + DFG +R
Sbjct: 136 QLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 109 LRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L NL + SNN L TP++ +L L ++ + +N+++ + P + NL +L L++ N
Sbjct: 67 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIIT--NKLTGAIPSTL 226
+ P L LTNL RL L N +I L LT L ++ N++T P L
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLSFGNQVTDLKP--L 173
Query: 227 GHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXX 286
+LT+L LD+S N++ L + L L ++N+I I P
Sbjct: 174 ANLTTLERLDISSNKVSDISVL--AKLTNLESLIATNNQISDITPLGILTNLDELSLNGN 231
Query: 287 XXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEI 346
G + L NL LDL+ N++S P + T+L L L N + P +
Sbjct: 232 QLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 283
Query: 347 GKILLLQNLDLSHNNLSGTIPMT--LHPMFLDMSFNNLEGEIP 387
+ L NL+L+ N L P++ + +L + FNN+ P
Sbjct: 284 AGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 96/192 (50%), Gaps = 19/192 (9%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ +L+NL L L N +T P + +L NL L LS+N++ +I +L L L
Sbjct: 108 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQ 160
Query: 142 RS--NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
S N+++ + P + NL +L L + N V S L +LTNLE L NQ + P
Sbjct: 161 LSFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216
Query: 200 REIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAEL 259
+G L NL LS+ N+L TL LT+L LDL+ NQ+ + PL + L EL
Sbjct: 217 --LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTEL 270
Query: 260 DLSDNKIRGIIP 271
L N+I I P
Sbjct: 271 KLGANQISNISP 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 61/204 (29%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIG---SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
+G L+NL L+L N L K+IG SL NL L L+NN + P+ L L E
Sbjct: 217 LGILTNLDELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTE 269
Query: 139 LYLRSNKLSGVLP--------------------QEIGNLKSLIWLSVMYNTVGGPIP--- 175
L L +N++S + P I NLK+L +L++ +N + P
Sbjct: 270 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSS 329
Query: 176 -----------------STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
S+L LTN+ L G NQ + P + NL +T L +
Sbjct: 330 LTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 387
Query: 219 TGA---------IPSTLGHLTSLL 233
T A IP+T+ ++T L
Sbjct: 388 TNAPVNYKANVSIPNTVKNVTGAL 411
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 11/173 (6%)
Query: 454 IRYCIGTGGYGSVYKA--ELPDGK--VVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
I IG G +G V +LP + VA+K L TE F +EA ++ H
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHP 94
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N++ L G + I E+ME GSL LR +D + + V +++ +A + YL
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL- 151
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYI 622
+ VHRD V+DFG +R L D+S+ T + G I
Sbjct: 152 --ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 202
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 109 LRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L NL + SNN L TP++ +L L ++ + +N+++ + P + NL +L L++ N
Sbjct: 66 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIIT--NKLTGAIPSTL 226
+ P L LTNL RL L N +I L LT L ++ N++T P L
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLSFGNQVTDLKP--L 172
Query: 227 GHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXX 286
+LT+L LD+S N++ L + L L ++N+I I P
Sbjct: 173 ANLTTLERLDISSNKVSDISVL--AKLTNLESLIATNNQISDITPLGILTNLDELSLNGN 230
Query: 287 XXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEI 346
G + L NL LDL+ N++S P + T+L L L N + P +
Sbjct: 231 QLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 282
Query: 347 GKILLLQNLDLSHNNLSGTIPMT--LHPMFLDMSFNNLEGEIP 387
+ L NL+L+ N L P++ + +L + FNN+ P
Sbjct: 283 AGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 129/284 (45%), Gaps = 49/284 (17%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ +L+NL L L N +T P + +L NL L LS+N++ +I +L L L
Sbjct: 107 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQ 159
Query: 142 RS--NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
S N+++ + P + NL +L L + N V S L +LTNLE L NQ + P
Sbjct: 160 LSFGNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 215
Query: 200 REIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAEL 259
+G L NL LS+ N+L TL LT+L LDL+ NQ+ + PL + L EL
Sbjct: 216 --LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTEL 269
Query: 260 DLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFP 319
L N+I I P + L L +L+L++N+L P
Sbjct: 270 KLGANQISNISP--------------------------LAGLTALTNLELNENQLEDISP 303
Query: 320 TGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLS 363
I N L +L L N++ P + + LQ L ++N +S
Sbjct: 304 --ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVS 343
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 61/204 (29%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIG---SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
+G L+NL L+L N L K+IG SL NL L L+NN + P+ L L E
Sbjct: 216 LGILTNLDELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAPLS--GLTKLTE 268
Query: 139 LYLRSNKLSGVLP--------------------QEIGNLKSLIWLSVMYNTVGGPIP--- 175
L L +N++S + P I NLK+L +L++ +N + P
Sbjct: 269 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSS 328
Query: 176 -----------------STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
S+L LTN+ L G NQ + P + NL +T L +
Sbjct: 329 LTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 386
Query: 219 TGA---------IPSTLGHLTSLL 233
T A IP+T+ ++T L
Sbjct: 387 TNAPVNYKANVSIPNTVKNVTGAL 410
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 130/282 (46%), Gaps = 45/282 (15%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ +L+NL L L N +T P + +L NL L LS+N++ + + L +L++L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLNF 158
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
N+++ + P + NL +L L + N V S L +LTNLE L NQ + P
Sbjct: 159 -GNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 211
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
+G L NL LS+ N+L TL LT+L LDL+ NQ+ + PL + L EL L
Sbjct: 212 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKL 267
Query: 262 SDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTG 321
N+I I P + L L +L+L++N+L P
Sbjct: 268 GANQISNISP--------------------------LAGLTALTNLELNENQLEDISP-- 299
Query: 322 IGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLS 363
I N L +L L N++ P + + LQ L S+N +S
Sbjct: 300 ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVS 339
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 126/283 (44%), Gaps = 27/283 (9%)
Query: 109 LRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L NL + SNN L TP++ +L L ++ + +N+++ + P + NL +L L++ N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIIT--NKLTGAIPSTL 226
+ P L LTNL RL L N +I L LT L + N++T P L
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLNFGNQVTDLKP--L 168
Query: 227 GHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXX 286
+LT+L LD+S N++ L + L L ++N+I I P
Sbjct: 169 ANLTTLERLDISSNKVSDISVL--AKLTNLESLIATNNQISDITPLGILTNLDELSLNGN 226
Query: 287 XXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEI 346
G + L NL LDL+ N++S P + T+L L L N + P +
Sbjct: 227 QLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 278
Query: 347 GKILLLQNLDLSHNNLSGTIPMT--LHPMFLDMSFNNLEGEIP 387
+ L NL+L+ N L P++ + +L + FNN+ P
Sbjct: 279 AGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 321
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 61/204 (29%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIG---SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
+G L+NL L+L N L K+IG SL NL L L+NN + P+ L L E
Sbjct: 212 LGILTNLDELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTE 264
Query: 139 LYLRSNKLSGVLP--------------------QEIGNLKSLIWLSVMYNTVGGPIP--- 175
L L +N++S + P I NLK+L +L++ +N + P
Sbjct: 265 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSS 324
Query: 176 -----------------STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
S+L LTN+ L G NQ + P + NL +T L +
Sbjct: 325 LTKLQRLFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 382
Query: 219 TGA---------IPSTLGHLTSLL 233
T A IP+T+ ++T L
Sbjct: 383 TNAPVNYKANVSIPNTVKNVTGAL 406
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 126/283 (44%), Gaps = 27/283 (9%)
Query: 109 LRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L NL + SNN L TP++ +L L ++ + +N+++ + P + NL +L L++ N
Sbjct: 62 LNNLTQINFSNNQLTDITPLK--NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIIT--NKLTGAIPSTL 226
+ P L LTNL RL L N +I L LT L + N++T P L
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTI-----SDISALSGLTSLQQLNFGNQVTDLKP--L 168
Query: 227 GHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXX 286
+LT+L LD+S N++ L + L L ++N+I I P
Sbjct: 169 ANLTTLERLDISSNKVSDISVL--AKLTNLESLIATNNQISDITPLGILTNLDELSLNGN 226
Query: 287 XXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEI 346
G + L NL LDL+ N++S P + T+L L L N + P +
Sbjct: 227 QLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 278
Query: 347 GKILLLQNLDLSHNNLSGTIPMT--LHPMFLDMSFNNLEGEIP 387
+ L NL+L+ N L P++ + +L + FNN+ P
Sbjct: 279 AGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 321
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ +L+NL L L N +T P + +L NL L LS+N++ + + L +L++L
Sbjct: 103 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLNF 158
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
N+++ + P + NL +L L + N V S L +LTNLE L NQ + P
Sbjct: 159 -GNQVTDLKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 211
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
+G L NL LS+ N+L TL LT+L LDL+ NQ+ + PL + L EL L
Sbjct: 212 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKL 267
Query: 262 SDNKIRGIIP 271
N+I I P
Sbjct: 268 GANQISNISP 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 61/204 (29%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIG---SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
+G L+NL L+L N L K+IG SL NL L L+NN + P+ L L E
Sbjct: 212 LGILTNLDELSLNGNQL-----KDIGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTE 264
Query: 139 LYLRSNKLSGVLP--------------------QEIGNLKSLIWLSVMYNTVGGPIP--- 175
L L +N++S + P I NLK+L +L++ +N + P
Sbjct: 265 LKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSS 324
Query: 176 -----------------STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
S+L LTN+ L G NQ + P + NL +T L +
Sbjct: 325 LTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAW 382
Query: 219 TGA---------IPSTLGHLTSLL 233
T A IP+T+ ++T L
Sbjct: 383 TNAPVNYKANVSIPNTVKNVTGAL 406
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 84
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 85 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 140
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGA 179
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 83
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 84 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 139
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGA 178
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 14/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L +F+E EA+++ ++H +V+LY
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLE----EAQIMKKLKHDKLVQLYA- 71
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ + EYM +GSL L+ D E L V++ VA ++Y+ + +
Sbjct: 72 VVSEEPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIERM---NYI 127
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQRL 628
HRD +ADFG ARL ++ + T R G + AP+ L
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEAAL 179
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 81
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGA 176
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ A VA+K + S VE+F EA V+ T++H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHD 70
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+VKL+ + K ++ I E+M +GSL L+ DE + + ++ +A ++++
Sbjct: 71 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLK-SDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ +HRD +ADFG AR+ ++ + T R G
Sbjct: 129 QR---NYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGA 172
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V+K D G++VA+KK +SE +D + E R+L ++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVA----HALSYLH-HD 571
KR + ++EY + L + R E ++VKS+ A+++ H H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE-------HLVKSITWQTLQAVNFCHKHN 122
Query: 572 CTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP-----DQ 626
C +HRD + DFG ARLL S T Y +P D
Sbjct: 123 C----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 627 RLSPPVN 633
+ PPV+
Sbjct: 179 QYGPPVD 185
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGK--VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
I IG G +G V + L P K VA+K L TE F +EA ++ H
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEH 74
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI++L G + + + E+ME G+L LR +D + + V +++ +A + YL
Sbjct: 75 PNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL 132
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYI 622
S VHRD V+DFG +R L +SS+ T + G I
Sbjct: 133 AE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI 183
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGA 170
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 42 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 98
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + EYME GSL LR D + + V +++ +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG AR+L D + T R G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 77
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 78 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 133
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGA 172
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 85
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 86 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 141
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA 180
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 81
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA 176
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGA 170
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 80
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 81 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 136
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA 175
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 66
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 67 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 124
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 125 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 179
Query: 627 RL 628
L
Sbjct: 180 AL 181
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 76
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 77 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 132
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGA 171
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 11/173 (6%)
Query: 454 IRYCIGTGGYGSVYKAEL--PDGK--VVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
I IG G +G V + L P K VA+K L TE F +EA ++ H
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR--REFLSEASIMGQFEHP 77
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NI++L G + + + E+ME G+L LR +D + + V +++ +A + YL
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--QFTVIQLVGMLRGIASGMRYL- 134
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYI 622
S VHRD V+DFG +R L +SS+ T + G I
Sbjct: 135 --AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+DF I +GTG +G V+ +G+ A+K L + VE +E +LS V H
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS-----VAH 563
I++++G + +F I +Y+E G LF +LR R N V V
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--------QRFPNPVAKFYAAEVCL 117
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIA 623
AL YLH + I++RD + DFG A+ +V L GT YIA
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAK--YVPDVTYXL-CGTPDYIA 171
Query: 624 PDQRLSPPVNQKI 636
P+ + P N+ I
Sbjct: 172 PEVVSTKPYNKSI 184
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKIRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA 170
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 90/216 (41%), Gaps = 12/216 (5%)
Query: 441 LYEDLINATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNE 499
LY ++ E F IG G +G V+K + KVVA+K + E +E Q E
Sbjct: 18 LYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQE 75
Query: 500 ARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
VLS + K YG L ++ I EY+ GS +L E L+ T+ I++
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILR 131
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY 619
+ L YLH + +HRD E +ADFG A L R GT
Sbjct: 132 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 188
Query: 620 GYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655
++AP+ + K DI + TA+ R +P
Sbjct: 189 FWMAPEVIKQSAYDSK--ADIWSLGITAIELARGEP 222
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 70
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 71 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 126
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA 165
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ A VA+K + S VE+F EA V+ T++H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHD 243
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+VKL+ + K ++ I E+M +GSL L+ DE + + ++ +A ++++
Sbjct: 244 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLK-SDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ +HRD +ADFG AR+ ++ + T R G
Sbjct: 302 QR---NYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGA 345
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 458 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVL-------STVRHR 509
+G G YG V K +P G+++A+K++ A V S Q + R+L TV
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIR-------ATVNS-QEQKRLLMDLDISMRTVDCP 110
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERG--SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
V YG + ++ E M+ + + D + I + ++ + S+ AL +
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEH 168
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
LH S++HRD + + DFG + L VDS +T+ AG Y+AP +R
Sbjct: 169 LHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVAKTIDAGCKPYMAP-ER 224
Query: 628 LSPPVNQK---IIQDI--ILVSTTALACLRSKPKSRPT-MQRISQELEGKTP-------- 673
++P +NQK + DI + ++ LA LR S T Q++ Q +E +P
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS 284
Query: 674 ----------MKKGLKE-ISISEMRNQEMFWLHESDNT 700
+KK KE + E+ F LHES T
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 322
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 82
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 140
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 42 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 98
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + EYME GSL LR D + + V +++ +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG +R+L D + T R G
Sbjct: 157 ASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 70
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 71 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPEA 183
Query: 627 RL 628
L
Sbjct: 184 AL 185
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 30 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 86
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + EYME GSL LR D + + V +++ +
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 144
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG +R+L D + T R G
Sbjct: 145 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 322
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 323 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 380
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY---GYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 381 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 435
Query: 627 RL 628
L
Sbjct: 436 AL 437
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 442 YEDLINATEDF---------HIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETE 488
YED +F I +G G +G V + +LP K VA+K L TE
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 489 DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE 548
F EA ++ H NI++L G + + + EYME GSL LR D
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 549 LNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ + V +++ +A + YL VHRD V+DFG +R+L D
Sbjct: 146 V--IQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 609 -SSNRTLRAG 617
+ T R G
Sbjct: 201 PEAAYTTRGG 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 82
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 140
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 438 GKILYEDLINAT-EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETED 489
G + +ED E+ H+++ +G G +GSV L D G+VVA+KKL S E
Sbjct: 1 GAMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE- 59
Query: 490 SAFVESFQNEARVLSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAI 547
+ F+ E +L +++H NIVK G C +R + I EY+ GSL L+ E I
Sbjct: 60 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 117
Query: 548 ELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHV 607
+ + + + + YL T +HRD + DFG ++L
Sbjct: 118 --DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
Query: 608 DSSNRTLR 615
D ++
Sbjct: 173 DKEXXKVK 180
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVL 503
D ++ +G G +G V+ AE D +VA+K L A + FQ EA +L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELL 71
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDD--DEAI-----------ELN 550
+ ++H +IVK YG C + ++EYM+ G L LR D I EL
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
++ ++I +A + YL + VHRD + DFG +R ++ S
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY---S 185
Query: 611 NRTLRAGTYGYIAPDQRLSPP 631
R G G+ R PP
Sbjct: 186 TDYYRVG--GHTMLPIRWMPP 204
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 64
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 122
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 442 YEDLINATEDF---------HIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETE 488
YED +F I +G G +G V + +LP K VA+K L TE
Sbjct: 26 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 85
Query: 489 DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE 548
F EA ++ H NI++L G + + + EYME GSL LR D
Sbjct: 86 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 549 LNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ + V +++ +A + YL VHRD V+DFG +R+L D
Sbjct: 144 V--IQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 609 -SSNRTLRAG 617
+ T R G
Sbjct: 199 PEAAYTTRGG 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 240 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 297
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 352
Query: 627 RL 628
L
Sbjct: 353 AL 354
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 95
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 153
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 154 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 205
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 442 YEDLINATEDF---------HIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETE 488
YED +F I +G G +G V + +LP K VA+K L TE
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 489 DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE 548
F EA ++ H NI++L G + + + EYME GSL LR D
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 549 LNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ + V +++ +A + YL VHRD V+DFG +R+L D
Sbjct: 146 V--IQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 609 -SSNRTLRAG 617
+ T R G
Sbjct: 201 PEAAYTTRGG 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 70
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 71 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVE 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 183
Query: 627 RL 628
L
Sbjct: 184 AL 185
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 62
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 63 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 120
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 121 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 175
Query: 627 RL 628
L
Sbjct: 176 AL 177
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 6 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 62
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 120
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 121 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 172
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 13 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 69
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + EYME GSL LR D + + V +++ +
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 127
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG +R+L D + T R G
Sbjct: 128 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 240 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 297
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 352
Query: 627 RL 628
L
Sbjct: 353 AL 354
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 64
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 122
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 67
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 125
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 64
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 122
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 123 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 177
Query: 627 RL 628
L
Sbjct: 178 AL 179
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 7 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 63
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 121
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 122 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 173
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 13 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 69
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 127
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 128 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 179
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 15 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 71
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 129
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 130 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 181
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 42 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 98
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + EYME GSL LR D + + V +++ +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG +R+L D + T R G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL----AEANLMKQLQHQRLVRLYA- 75
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HRD +ADFG ARL ++ + T R G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL--IEDAEXTAREGA 170
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 12 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 68
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 126
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 127 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 178
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 63
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + + + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 64 KLVQLYAV-VSEEPIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 121
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 122 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEA 176
Query: 627 RL 628
L
Sbjct: 177 AL 178
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 42 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 98
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + EYME GSL LR D + + V +++ +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG +R+L D + T R G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 239
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 240 KLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE 297
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 298 R---MNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 352
Query: 627 RL 628
L
Sbjct: 353 AL 354
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 42 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 98
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + EYME GSL LR D + + V +++ +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG R+L D + T R G
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 64
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 122
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ + YL T +HRD + DFG ++L D
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 95/258 (36%), Gaps = 61/258 (23%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G V+ + VA+K + + + F+E EA V+ + H +V+LYG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 73
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
CL + + ++E+ME G L LR + + V ++YL C ++
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VI 128
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPV----- 632
HRD V+DFG R + D + G P + SP V
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-----SSTGTKFPVKWASPEVFSFSR 183
Query: 633 -----------------------------NQKIIQDII---------LVSTTALA----C 650
N ++++DI L ST C
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 243
Query: 651 LRSKPKSRPTMQRISQEL 668
R +P+ RP R+ ++L
Sbjct: 244 WRERPEDRPAFSRLLRQL 261
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 457 CIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
C+G G YG V++ G+ VA+ K+ S E S F E+ E +RH NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAV-KIFSSRDEKSWFRET---ELYNTVMLRHENILGFIA 98
Query: 517 FCLHKR----CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ R ++ I Y E GSL+ L + L+ + IV S+A L++LH +
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 573 -----TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR-----TLRAGTYGYI 622
P+I HRD + +AD G A ++H S+N+ R GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 623 APD 625
AP+
Sbjct: 214 APE 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
D + C+G G YG V++ G+ VA+ K+ S E S F E+ E +R
Sbjct: 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAV-KIFSSRDEKSWFRET---ELYNTVMLR 60
Query: 508 HRNIVKLYGFCLHKR----CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAH 563
H NI+ + R ++ I Y E GSL+ L + L+ + IV S+A
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIAS 116
Query: 564 ALSYLHHDC-----TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR-----T 613
L++LH + P+I HRD + +AD G A ++H S+N+
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNN 175
Query: 614 LRAGTYGYIAPD 625
R GT Y+AP+
Sbjct: 176 PRVGTKRYMAPE 187
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G V+ + VA+K + + + F+E EA V+ + H +V+LYG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE----EAEVMMKLSHPKLVQLYGV 90
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
CL + + ++E+ME G L LR + + V ++YL C ++
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VI 145
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
HRD V+DFG R + D
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD 176
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+G G +G V+ VA+K L Q AF+ EA ++ ++H+ +V+LY
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLYA- 71
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + ++ I EYME GSL L+ I+L + +++ +A ++++ + +
Sbjct: 72 VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYI 127
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
HR+ +ADFG ARL ++ + T R G
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGA 166
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 11/173 (6%)
Query: 454 IRYCIGTGGYGSVYKA--ELPDGK--VVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
I IG G +G V +LP + VA+K L TE F +EA ++ H
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHP 68
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N++ L G + I E+ME GSL LR +D + + V +++ +A + YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL- 125
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYI 622
+ VHR V+DFG +R L D+S+ T + G I
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 457 CIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
C+G G YG V++ G+ VA+ K+ S E S F E+ E +RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAV-KIFSSRDEKSWFRET---ELYNTVMLRHENILGFIA 69
Query: 517 FCLHKR----CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ R ++ I Y E GSL+ L + L+ + IV S+A L++LH +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 573 -----TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR-----TLRAGTYGYI 622
P+I HRD + +AD G A ++H S+N+ R GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 623 APD 625
AP+
Sbjct: 185 APE 187
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 67
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--DHIKLLQYTSQ 125
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +G L L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G V+ + VA+K + + + F+E EA V+ + H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 70
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
CL + + ++E+ME G L LR + + V ++YL C ++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VI 125
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
HRD V+DFG R + D
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 12/199 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+K + KVVA+K + E +E Q E VLS + K YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ I EY+ GS +L E L+ T+ I++ + L YLH +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 140
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
+HRD E +ADFG A L R GT ++AP+ + K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK- 199
Query: 637 IQDIILVSTTALACLRSKP 655
DI + TA+ R +P
Sbjct: 200 -ADIWSLGITAIELARGEP 217
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G V+ + VA+K + + + F+E EA V+ + H +V+LYG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 68
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
CL + + ++E+ME G L LR + + V ++YL C ++
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VI 123
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
HRD V+DFG R + D
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ A VA+K + S VE+F EA V+ T++H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHD 237
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+VKL+ + K ++ I E+M +GSL L+ DE + + ++ +A ++++
Sbjct: 238 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLK-SDEGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
+ +HRD +ADFG AR+
Sbjct: 296 QR---NYIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 12/199 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+K + KVVA+K + E +E Q E VLS + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ I EY+ GS +L E L+ T+ I++ + L YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
+HRD E +ADFG A L R GT ++AP+ + K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK- 184
Query: 637 IQDIILVSTTALACLRSKP 655
DI + TA+ R +P
Sbjct: 185 -ADIWSLGITAIELARGEP 202
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 11 EERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 67
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I E++ GSL L+ E I + + +
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQ 125
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL T +HRD + DFG ++L D ++
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 77 ST-KPQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLH---AKSII 130
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 12/199 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+K + KVVA+K + E +E Q E VLS + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ I EY+ GS +L E L+ T+ I++ + L YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
+HRD E +ADFG A L R GT ++AP+ + K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK- 184
Query: 637 IQDIILVSTTALACLRSKP 655
DI + TA+ R +P
Sbjct: 185 -ADIWSLGITAIELARGEP 202
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 13/207 (6%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E F + +G G YGSVYKA G++VA+K++ ++ E ++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDS 83
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
++VK YG ++ + EY GS+ ++R ++ L I++S L YL
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEYL 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRL 628
H +HRD A +ADFG A L + R GT ++AP+ +
Sbjct: 142 HF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE--V 196
Query: 629 SPPVNQKIIQDIILVSTTALACLRSKP 655
+ + DI + TA+ KP
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKP 223
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ----EAQVMKKLRHE 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +G L L+ + L + V++ +A ++Y+
Sbjct: 74 KLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG ARL ++ + T R G + AP+
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 627 RL 628
L
Sbjct: 187 AL 188
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 442 YEDLINATEDF---------HIRYCIGTGGYGSVYKAELP-DGK---VVALKKLHQSETE 488
+ED A +F I IG G +G V L GK VA+K L T+
Sbjct: 12 FEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD 71
Query: 489 DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE 548
F +EA ++ H NI+ L G + + I EYME GSL LR +D
Sbjct: 72 KQR--RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 549 LNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ + V +++ + + YL S VHRD V+DFG +R+L D
Sbjct: 130 V--IQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 609 -SSNRTLRAG 617
+ T R G
Sbjct: 185 PEAAYTTRGG 194
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + +G G +G V+ VA+K L AF++ EA+V+ +RH
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQ----EAQVMKKLRHE 240
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+V+LY + + ++ + EYM +GSL L+ + L + V++ +A ++Y+
Sbjct: 241 KLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLK-GEMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPDQ 626
+ VHRD VADFG RL ++ + T R G + AP+
Sbjct: 299 R---MNYVHRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEA 353
Query: 627 RL 628
L
Sbjct: 354 AL 355
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 89 ST-KPQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLH---AKSII 142
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTA 602
HRD + DFG A
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K L+++ T A VE F +EA +++++ H ++V
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVE-FMDEALIMASMDHPHLV 103
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL + + + M G L + + + I LNW + +A + YL
Sbjct: 104 RLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYL 156
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG ARLL D G
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 202
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEA--RVLS 504
AT + IG G YG+VYKA P G VALK + E+ + + + A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 505 TVRHRNIVKLYGFCLHKRC-----MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
H N+V+L C R + ++E++++ Y+ + + + ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLMR 119
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
L +LH +C IVHRD +ADFG AR+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 452 FHIRYCIGTGGYGSVYKAELP-DGK---VVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
I IG G +G V L GK VA+K L T+ F +EA ++
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFD 67
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H NI+ L G + + I EYME GSL LR +D + + V +++ + + Y
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKY 125
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
L S VHRD V+DFG +R+L D + T R G
Sbjct: 126 LSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 173
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 127/286 (44%), Gaps = 23/286 (8%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
L+NL+YLNL N +T P + +L L LY+ N + + ++ +L NL ELYL +
Sbjct: 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDISALQ--NLTNLRELYLNED 120
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGN 204
+S + P + NL L++ N + S L T L L + ++ P I N
Sbjct: 121 NISDISP--LANLTKXYSLNLGANHNLSDL-SPLSNXTGLNYLTVTESKVKDVTP--IAN 175
Query: 205 LKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDN 264
L +L LS+ N++ P L LTSL Y NQ+ P + N + L L + +N
Sbjct: 176 LTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNN 231
Query: 265 KIRGIIPDEXXXXXXXXXXXXXXXXXXGQIP--FAIGKLFNLVSLDLSKNKLSGSFPTGI 322
KI + P QI A+ L L L++ N++S + +
Sbjct: 232 KITDLSP------LANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISD--ISVL 283
Query: 323 GNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPM 368
N ++L L LN+N L IG + L L LS N+++ P+
Sbjct: 284 NNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPL 329
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ SL++L Y N +T P + + L L + NN + +P+ +L L L +
Sbjct: 195 LASLTSLHYFTAYVNQITDITP--VANXTRLNSLKIGNNKITDLSPL--ANLSQLTWLEI 250
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
+N++S + + +L L L+V N + S L L+ L LFL NQ
Sbjct: 251 GTNQISDI--NAVKDLTKLKXLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDXEV 306
Query: 202 IGNLKNLTHLSIITNKLTGAIP 223
IG L NLT L + N +T P
Sbjct: 307 IGGLTNLTTLFLSQNHITDIRP 328
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 452 FHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSE------TEDSAFVESFQ----NEA 500
F +R +G+G YG V + +G A+K + +S+ ++D+ +E F NE
Sbjct: 39 FKVRK-LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
+L ++ H NI+KL+ K+ + + E+ E G LF + + + E + NI+K
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD---AANIMKQ 154
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAG 617
+ + YLH +IVHRD + DFG + D R R G
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD-RLG 210
Query: 618 TYGYIAPDQRLSPPVNQK 635
T YIAP + L N+K
Sbjct: 211 TAYYIAP-EVLKKKYNEK 227
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEA--RVLS 504
AT + IG G YG+VYKA P G VALK + E+ + + + A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 505 TVRHRNIVKLYGFCLHKRC-----MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
H N+V+L C R + ++E++++ Y+ + + + ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLMR 119
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
L +LH +C IVHRD +ADFG AR+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEA--RVLS 504
AT + IG G YG+VYKA P G VALK + E+ + + + A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 505 TVRHRNIVKLYGFCLHKRC-----MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
H N+V+L C R + ++E++++ Y+ + + + ++++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLMR 119
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
L +LH +C IVHRD +ADFG AR+
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 452 FHIRYCIGTGGYGSVYKAELP-DGK---VVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
I IG G +G V L GK VA+K L T+ F +EA ++
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR--RDFLSEASIMGQFD 73
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H NI+ L G + + I EYME GSL LR +D + + V +++ + + Y
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKY 131
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
L S VHRD V+DFG +R+L D + T R G
Sbjct: 132 LSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 179
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 450 EDF-HIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I +G G +G VYKA+ + V+A K+ +++E+ +E + E +L++ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL ++ ++ + E+ G++ V+ + + L ++ + K AL+YL
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYL 151
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD + +ADFG + R GT ++AP+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 73 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 126
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 78 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 131
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 78 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 131
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 75 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 128
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H+++ +G G +GSV L D G+VVA+KKL S E + F+ E +
Sbjct: 9 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---HLRDFEREIEI 65
Query: 503 LSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L +++H NIVK G C +R + I EY+ GSL L+ E I + + +
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQ 123
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ + YL T +HR+ + DFG ++L D
Sbjct: 124 ICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 94/258 (36%), Gaps = 61/258 (23%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G V+ + VA+K + + + F+E EA V+ + H +V+LYG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 71
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
CL + + + E+ME G L LR + + V ++YL C ++
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VI 126
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPV----- 632
HRD V+DFG R + D + G P + SP V
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-----SSTGTKFPVKWASPEVFSFSR 181
Query: 633 -----------------------------NQKIIQDII---------LVSTTALA----C 650
N ++++DI L ST C
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC 241
Query: 651 LRSKPKSRPTMQRISQEL 668
R +P+ RP R+ ++L
Sbjct: 242 WRERPEDRPAFSRLLRQL 259
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGK--VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
HI IG+G G V L P + VA+K L TE F +EA ++ H
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSEASIMGQFDH 109
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI++L G R + EYME GSL LR D + + V +++ V + YL
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL 167
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
VHRD V+DFG +R+L D
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G V+ + VA+K + + + F+E EA V+ + H +V+LYG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYGV 70
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
CL + + ++E+ME G L LR + + V ++YL S++
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEE---ASVI 125
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
HRD V+DFG R + D
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 11/160 (6%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGK--VVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
HI IG+G G V L P + VA+K L TE F +EA ++ H
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSEASIMGQFDH 109
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI++L G R + EYME GSL LR D + + V +++ V + YL
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL 167
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
VHRD V+DFG +R+L D
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 21/190 (11%)
Query: 442 YEDLINATEDF---------HIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETE 488
YED +F I +G G +G V + +LP K VA+K L TE
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 489 DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE 548
F EA ++ H NI++L G + + + E ME GSL LR D
Sbjct: 88 KQR--RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 549 LNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ + V +++ +A + YL VHRD V+DFG +R+L D
Sbjct: 146 V--IQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 609 -SSNRTLRAG 617
+ T R G
Sbjct: 201 PEAAYTTRGG 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 42 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 98
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + E ME GSL LR D + + V +++ +
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG +R+L D + T R G
Sbjct: 157 ASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 78/194 (40%), Gaps = 29/194 (14%)
Query: 442 YEDLINATEDFH---------IRYCIGTGGYGSVY--------KAELPDGKVVALKKLHQ 484
YED A +F I IG G +G V K ELP VA+K L
Sbjct: 5 YEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELP----VAIKTLKV 60
Query: 485 SETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDD 544
TE F EA ++ H NI+ L G + + + EYME GSL L+ +D
Sbjct: 61 GYTEKQR--RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND 118
Query: 545 EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
+ + V +++ ++ + YL VHRD V+DFG +R+
Sbjct: 119 G--QFTVIQLVGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRV 173
Query: 605 LHVD-SSNRTLRAG 617
L D + T R G
Sbjct: 174 LEDDPEAAYTTRGG 187
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 450 EDF-HIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I +G G +G VYKA+ + V+A K+ +++E+ +E + E +L++ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL ++ ++ + E+ G++ V+ + + L ++ + K AL+YL
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYL 151
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD + +ADFG + R GT ++AP+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K L+++ T A VE F +EA +++++ H ++V
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET-TGPKANVE-FMDEALIMASMDHPHLV 80
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL + + + M G L + + + I LNW + +A + YL
Sbjct: 81 RLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYL 133
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG ARLL D G
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 179
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 450 EDF-HIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I +G G +G VYKA+ + V+A K+ +++E+ +E + E +L++ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDH 93
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL ++ ++ + E+ G++ V+ + + L ++ + K AL+YL
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYL 151
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD + +ADFG + R GT ++AP+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 446 INATEDFHIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETEDSAFVESFQNEAR 501
++AT + I +G G +G V + +LP K VA+K L TE F EA
Sbjct: 13 LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEAS 69
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
++ H NI++L G + + + E ME GSL LR D + + V +++ +
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 127
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD-SSNRTLRAG 617
A + YL VHRD V+DFG +R+L D + T R G
Sbjct: 128 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 89 STAPQ-LAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYLH---AKSII 142
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTA 602
HRD + DFG A
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 101 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 154
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 73 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 126
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTA 602
HRD + DFG A
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G G YG V K D G++VA+KK +S+ +D + E ++L +RH N+V L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE--LNWTRRVNIVKSVAHALSYLHHDCTP 574
C K+ + ++E+++ + + DD E L++ + + + + + H +
Sbjct: 92 VCKKKKRWYLVFEFVD-----HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SH 143
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+I+HRD + DFG AR L T Y AP+
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPE 194
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 100 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 153
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 8/189 (4%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTV-R 507
EDF + +G G +G V+ AE + A+K L + VE E RVLS
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H + ++ K +FF+ EY+ G L Y ++ + + +R + L +
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQF 134
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
LH + IV+RD +ADFG + + + GT YIAP+
Sbjct: 135 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 628 LSPPVNQKI 636
L N +
Sbjct: 192 LGQKYNHSV 200
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 461 GGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST--VRHRNIVKLYGFC 518
G +G V+KA+L + + VA+K + + S+QNE V S ++H NI++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQ------SWQNEYEVYSLPGMKHENILQFIG-- 85
Query: 519 LHKRC------MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
KR ++ I + E+GSL L+ A ++W +I +++A L+YLH D
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 573 -------TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS--NRTLRAGTYGYIA 623
P+I HRD A +ADFG A S + + GT Y+A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 624 PD 625
P+
Sbjct: 202 PE 203
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 73 STAPQ-LAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 126
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S + +G+ ++AP+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 93 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 146
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTA 602
HRD + DFG A
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 83/195 (42%), Gaps = 30/195 (15%)
Query: 77 SIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEI-GSLRN 135
+IP I + + K L+L+ N L+ K L L +LYL++N L T P I L+N
Sbjct: 30 AIPSNIPA--DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 136 LEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQF 194
LE L++ NKL +P +F +L NL L L NQ
Sbjct: 87 LETLWVTDNKLQA-------------------------LPIGVFDQLVNLAELRLDRNQL 121
Query: 195 NGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFS 254
PR +L LT+LS+ N+L LTSL L L NQL +
Sbjct: 122 KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLT 181
Query: 255 ALAELDLSDNKIRGI 269
L L L +N+++ +
Sbjct: 182 ELKTLKLDNNQLKRV 196
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRS 143
L+ L+ L L N L T+P I L+NLE L++++N L L NL EL L
Sbjct: 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDR 118
Query: 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREI 202
N+L + P+ +L L +LS+ YN + +P +F +LT+L+ L L NQ
Sbjct: 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKRVPEGAF 177
Query: 203 GNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFN 240
L L L + N+L L L L L N
Sbjct: 178 DKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 67/168 (39%), Gaps = 29/168 (17%)
Query: 174 IPSTLF-RLTNLERLFLGCNQFNGTIPREI-GNLKNLTHLSIITNKLTGAIPSTLGHLTS 231
+PS F RLT L L+L N+ T+P I LKNL L + NKL L +
Sbjct: 52 LPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVN 110
Query: 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXX 291
L L L NQL S P + + L L L N+++ +
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL---------------------- 148
Query: 292 GQIPFAI-GKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSL 338
P + KL +L L L N+L TEL+ L L++N L
Sbjct: 149 ---PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 77 SIPPQI-GSLSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGTTPIEIGSLR 134
S+PP++ SL+ L YL+L +N L ++PK + L +L+ L L NN L L
Sbjct: 123 SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLT 181
Query: 135 NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L+ L L +N+L V +L+ L L + N
Sbjct: 182 ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST 505
++ E + I +G G +G VYKA+ + +A K+ ++++E+ +E + E +L+T
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--LEDYIVEIEILAT 64
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIV-KSVAHA 564
H IVKL G H ++ + E+ G++ ++ + D + ++ +V + + A
Sbjct: 65 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEA 121
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
L++LH + I+HRD + +ADFG + R GT ++AP
Sbjct: 122 LNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 178
Query: 625 D 625
+
Sbjct: 179 E 179
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF +G G +G V KA D + A+KK+ +E + S + +E +L+++ H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL----SEVMLLASLNHQ 62
Query: 510 NIVKLYGFCLHKR-------------CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV- 555
+V+ Y L +R +F EY E G+L+ ++ ++ LN R
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEY 118
Query: 556 -NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
+ + + ALSY+H + I+HRD + DFG A+ +H
Sbjct: 119 WRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L+ + +++F+NE VL RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
K + + ++ E SL++ L + E+ + ++I + A + YLH SI+
Sbjct: 101 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLH---AKSII 154
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTA 602
HRD + DFG A
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 8/189 (4%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTV-R 507
EDF + +G G +G V+ AE + A+K L + VE E RVLS
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H + ++ K +FF+ EY+ G L Y ++ + + +R + L +
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQF 133
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
LH + IV+RD +ADFG + + + GT YIAP+
Sbjct: 134 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 628 LSPPVNQKI 636
L N +
Sbjct: 191 LGQKYNHSV 199
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG+G +G+VYK + VA+K L + F ++F+NE VL RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQF-QAFRNEVAVLRKTRHVNILLFMGY 100
Query: 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577
+ K + + ++ E SL+ L + ++ + ++I + A + YLH +I+
Sbjct: 101 -MTKDNLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLH---AKNII 154
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
HRD + DFG A + S ++ + G+ ++AP+
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST 505
++ E + I +G G +G VYKA+ + +A K+ ++++E+ +E + E +L+T
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--LEDYIVEIEILAT 72
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIV-KSVAHA 564
H IVKL G H ++ + E+ G++ ++ + D + ++ +V + + A
Sbjct: 73 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEA 129
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
L++LH + I+HRD + +ADFG + R GT ++AP
Sbjct: 130 LNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 186
Query: 625 D 625
+
Sbjct: 187 E 187
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 32/173 (18%)
Query: 458 IGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
IG G +G V++A P +VA+K L + + D FQ EA +++ + NI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD--MQADFQREAALMAEFDNPNI 112
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLR---------------------DDDEAIELN 550
VKL G C + M ++EYM G L LR L+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
++ I + VA ++YL VHRD +ADFG +R
Sbjct: 173 CAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 25/259 (9%)
Query: 375 LDMSFNNLEGEIPTYLRDNPPNSFVGNKGLCGHVQVLAFTIFGFILLLKGKSENLKLVTG 434
L MSF ++ LRD P S V + L + L + + F L K K N+
Sbjct: 3 LHMSFETRFEKMDNLLRD--PKSEVNSDCLLDGLDALVYDL-DFPALRKNK--NIDNFLS 57
Query: 435 GYDGKI-LYEDLINATEDFHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSET---ED 489
Y I DL ED+ + IG G +G V KV A+K L + E D
Sbjct: 58 RYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD 117
Query: 490 SAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDD--EAI 547
SAF F E +++ +V+L+ R ++ + EYM G L ++ + D E
Sbjct: 118 SAF---FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKW 174
Query: 548 ELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHV 607
+T V + H++ ++H D P + D +ADFGT ++
Sbjct: 175 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK---------LADFGTCMKMNK 225
Query: 608 DSSNRTLRA-GTYGYIAPD 625
+ R A GT YI+P+
Sbjct: 226 EGMVRCDTAVGTPDYISPE 244
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 461 GGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520
G +G VYKA+ + V+A K+ +++E+ +E + E +L++ H NIVKL +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRD 580
+ ++ + E+ G++ V+ + + L ++ + K AL+YLH + I+HRD
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLHDN---KIIHRD 133
Query: 581 XXXXXXXXXXXXEAFVADFG-TARLLHVDSSNRTLRAGTYGYIAPD 625
+ +ADFG +A+ R GT ++AP+
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G V A E GK VA+KK+ + + E NE ++ H N+V +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ + E++E G+L ++ +N + + SV ALSYLH+ +
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIATVCLSVLRALSYLHNQ---GV 162
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
+HRD ++DFG + + R GT ++AP+ P ++
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 637 IQDIILVSTTALACLRSKPK--SRPTMQRISQELEGKTPMKKGLKEIS 682
DI + + + +P + P +Q + + + P K L ++S
Sbjct: 223 --DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVS 268
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 12/199 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+K + +VVA+K + E +E Q E VLS + K YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ I EY+ GS +LR A + + ++K + L YLH +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSEKK--- 141
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
+HRD + +ADFG A L R GT ++AP+ + K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK- 200
Query: 637 IQDIILVSTTALACLRSKP 655
DI + TA+ + +P
Sbjct: 201 -ADIWSLGITAIELAKGEP 218
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 28/185 (15%)
Query: 457 CIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV--RHRNIVKL 514
C+G G YG V++ L G+ VA+ K+ S E S F E + +TV RH NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAV-KIFSSRDEQSWF-----RETEIYNTVLLRHDNILGF 67
Query: 515 YGFCLHKR----CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
+ R ++ I Y E GSL+ L+ + +E + R+ + S A L++LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ--RQTLEPHLALRLAV--SAACGLAHLHV 123
Query: 571 DC-----TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSN-----RTLRAGTYG 620
+ P+I HRD + +AD G A ++H S+ R GT
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKR 182
Query: 621 YIAPD 625
Y+AP+
Sbjct: 183 YMAPE 187
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 24/178 (13%)
Query: 458 IGTGGYGSVY----KAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
+G+G YG V K + + ++K S + +S +E E VL + H NI+K
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE----EVAVLKLLDHPNIMK 100
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAI---ELNWTRRVNIVKSVAHALSYLHH 570
LY F KR + + E + G LF DE I + N I+K V ++YLH
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELF------DEIIHRMKFNEVDAAVIIKQVLSGVTYLH- 153
Query: 571 DCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+IVHRD + + DFG + + + R GT YIAP+
Sbjct: 154 --KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYIAPE 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 21/198 (10%)
Query: 429 LKLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSET 487
L++V D ++L + + IG G G V A E G+ VA+K + +
Sbjct: 34 LRMVVDQGDPRLLLDSYVK----------IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ 83
Query: 488 EDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAI 547
+ E NE ++ +H N+V++Y L ++ + E+++ G+L ++ +
Sbjct: 84 QRR---ELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV----SQV 136
Query: 548 ELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHV 607
LN + + ++V AL+YLH ++HRD ++DFG +
Sbjct: 137 RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193
Query: 608 DSSNRTLRAGTYGYIAPD 625
D R GT ++AP+
Sbjct: 194 DVPKRKXLVGTPYWMAPE 211
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG G +G V + G VA+K + ++ A ++F EA V++ +RH N+V+L G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 518 CLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+ ++ ++ + EYM +GSL LR ++ L + V A+ YL + +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTAR 603
VHRD A V+DFG +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF +G G +G V KA D + A+KK+ +E + S + +E +L+++ H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL----SEVMLLASLNHQ 62
Query: 510 NIVKLYGFCLHKR-------------CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV- 555
+V+ Y L +R +F EY E +L+ ++ ++ LN R
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN----LNQQRDEY 118
Query: 556 -NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
+ + + ALSY+H + I+HRD + DFG A+ +H
Sbjct: 119 WRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 15/182 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+DF I IG G + V ++ G+V A+K +++ + V F+ E VL
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR--RVNIVKSV--AHA 564
R I +L+ + ++ + EY G L +L E I R IV ++ H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA-GTYGYIA 623
L Y+H D P + D +ADFG+ L D + R+L A GT Y++
Sbjct: 181 LGYVHRDIKPDNILLDRCGHIR---------LADFGSCLKLRADGTVRSLVAVGTPDYLS 231
Query: 624 PD 625
P+
Sbjct: 232 PE 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + LS+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFC 119
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + GK VA+K + +++ S+ + F+ E R++ + H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 66
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI---VKSVAHALS 566
NIVKL+ ++ ++ + EY G +F D + W + + + A+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVF------DYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
Y H IVHRD +ADFG + + T G+ Y AP+
Sbjct: 121 YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPE 175
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG G +G V + G VA+K + ++ A ++F EA V++ +RH N+V+L G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 518 CLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+ ++ ++ + EYM +GSL LR ++ L + V A+ YL + +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTAR 603
VHRD A V+DFG +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 70/169 (41%), Gaps = 26/169 (15%)
Query: 176 STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYL 235
S L LTNL L L NQ L NL L ++ N+L LT+L YL
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 236 DLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIP 295
+L+ NQL S + L ELDLS N+++ +P+
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEG---------------------- 175
Query: 296 FAIGKLFNLVSLDLSKNKLSGSFPTGI-GNCTELQHLALNHNSLDGTIP 343
KL L L L +N+L S P G+ T LQ++ L+ N D T P
Sbjct: 176 -VFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ L L NKL +
Sbjct: 25 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVRYLALGGNKLHDI-- 78
Query: 152 QEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREIGNLKNLTH 210
+ L +L +L + N + +P+ +F +LTNL+ L L NQ L NLT+
Sbjct: 79 SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGII 270
L++ N+L LT+L LDLS+NQL S + L +L L N+++ +
Sbjct: 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS-V 196
Query: 271 PD 272
PD
Sbjct: 197 PD 198
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 82 IGSLSNLKYL-NLRWNNLTGTIPKEIGSLR---NLEVLYLSNNSLHGTTPIEIGSLRNLE 137
I S+ ++YL N+R+ L G +I +L+ NL L L+ N L L NL+
Sbjct: 53 IKSVQGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112
Query: 138 ELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNG 196
EL L N+L + L +L +L++ +N + +P +F +LTNL L L NQ
Sbjct: 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQS 171
Query: 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYL 235
L L L + N+L LTSL Y+
Sbjct: 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYI 210
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
I L N+ +L++ NKL S L LT+L YL L+ NQL S + L EL L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 262 SDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAI-GKLFNLVSLDLSKNKLSGSFPT 320
+N+++ + PD +P + KL NL LDLS N+L S P
Sbjct: 117 VENQLQSL-PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPE 174
Query: 321 GI-GNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIP 367
G+ T+L+ L L N L ++ LQ + L N T P
Sbjct: 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 106 IGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP----QEIGNLKSLI 161
I L N+ L L N LH + ++ L NL L L N+L LP ++ NLK L+
Sbjct: 59 IQYLPNVRYLALGGNKLHDISALK--ELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELV 115
Query: 162 WLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREI-GNLKNLTHLSIITNKLT 219
+ + +P +F +LTNL L L NQ ++P+ + L NLT L + N+L
Sbjct: 116 LVENQLQS----LPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQ 170
Query: 220 GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDN 264
LT L L L NQL S ++L + L DN
Sbjct: 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
L+NLK L L N L L NL L L++N L L NL EL L N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYN 167
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREIG 203
+L + L L L + N + +P +F RLT+L+ ++L N ++ T P
Sbjct: 168 QLQSLPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP---- 222
Query: 204 NLKNLTHLSIITNKLTGAIPSTLGHLT 230
+ +LS NK +G + ++ G +
Sbjct: 223 ---GIRYLSEWINKHSGVVRNSAGSVA 246
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 20/180 (11%)
Query: 442 YEDLINATEDF---------HIRYCIGTGGYGSVY--KAELPDGK--VVALKKLHQSETE 488
YED A F I IG G +G V + +LP + VA+K L TE
Sbjct: 26 YEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE 85
Query: 489 DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE 548
F EA ++ H N+V L G + + + E+ME G+L LR D +
Sbjct: 86 KQR--RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--Q 141
Query: 549 LNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ V +++ +A + YL VHRD V+DFG +R++ D
Sbjct: 142 FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG G +G V + G VA+K + ++ A ++F EA V++ +RH N+V+L G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 518 CLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+ ++ ++ + EYM +GSL LR ++ L + V A+ YL + +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTAR 603
VHRD A V+DFG +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
IG G +G V + G VA+K + ++ A ++F EA V++ +RH N+V+L G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCI-----KNDATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 518 CLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+ ++ ++ + EYM +GSL LR ++ L + V A+ YL + +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTAR 603
VHRD A V+DFG +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 68
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 127 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 68
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 127 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 180
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 443 EDLINATEDFHIRYCIGTGGYGSVYKAELP--DGKVVALK-KLHQSETEDSAFVESFQNE 499
ED++ + F + +G G +GSV +A+L DG V + K+ +++ S+ +E F E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 500 ARVLSTVRHRNIVKLYGFCLHKRCM------FFIYEYMERGSLFYVL---RDDDEAIELN 550
A + H ++ KL G L R I +M+ G L L R + L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
V + +A + YL + + +HRD VADFG +R ++
Sbjct: 136 LQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 30/197 (15%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETE----------DSAFVES----F 496
D+ I + G + + E D K ALKK +S E D ++S F
Sbjct: 32 DYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 497 QNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDE--AIELNWTRR 554
+NE ++++ +++ + G + ++ IYEYME S +L+ D+ ++ N+T
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS---ILKFDEYFFVLDKNYTCF 147
Query: 555 V------NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ I+KSV ++ SY+H++ +I HRD ++DFG + + VD
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM-VD 204
Query: 609 SSNRTLRAGTYGYIAPD 625
+ R GTY ++ P+
Sbjct: 205 KKIKGSR-GTYEFMPPE 220
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 174
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 25/256 (9%)
Query: 378 SFNNLEGEIPTYLRDNPPNSFVGNKGLCGHVQVLAFTIFGFILLLKGKSENLKLVTGGYD 437
SF ++ LRD P S V + L + L + + F L K K N+ Y
Sbjct: 1 SFETRFEKMDNLLRD--PKSEVNSDCLLDGLDALVYDL-DFPALRKNK--NIDNFLSRYK 55
Query: 438 GKI-LYEDLINATEDFHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSET---EDSAF 492
I DL ED+ + IG G +G V KV A+K L + E DSAF
Sbjct: 56 DTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 115
Query: 493 VESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDD--EAIELN 550
F E +++ +V+L+ R ++ + EYM G L ++ + D E
Sbjct: 116 ---FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 172
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+T V + H++ ++H D P + D +ADFGT ++ +
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK---------LADFGTCMKMNKEGM 223
Query: 611 NRTLRA-GTYGYIAPD 625
R A GT YI+P+
Sbjct: 224 VRCDTAVGTPDYISPE 239
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 458 IGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G YG V K +L G A+K + +S ++ + +E VL + H NI+KLY
Sbjct: 12 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVN---IVKSVAHALSYLHHDC 572
F KR + + E G LF DE I V+ I+K V +YLH
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELF------DEIILRQKFSEVDAAVIMKQVLSGTTYLH--- 121
Query: 573 TPSIVHRDXX-XXXXXXXXXXEAF--VADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+IVHRD +A + DFG + V + R GT YIAP+
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE-RLGTAYYIAPE 176
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 445 LINATEDFHIRYCIGTGGYGSVYKA-ELPD-GKVVALKKLHQSETEDSAFVESFQNEA-- 500
L A + + IG G YG V+KA +L + G+ VALK++ E+ + + + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 501 RVLSTVRHRNIVKLYGFCLHKRC-----MFFIYEYMERGSLFYVLRDDDEAIELNWTRRV 555
R L T H N+V+L+ C R + ++E++++ Y+ + + + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK-- 123
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
+++ + L +LH + +VHRD + +ADFG AR+
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 451 DFHIRYCIGTGGYGSV----YKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
DFH IG G +G V +KAE V L+K + ++ + S +N +L V
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN--VLLKNV 96
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
+H +V L+ ++F+ +Y+ G LFY L+ + +E R +A AL
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE---PRARFYAAEIASALG 153
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQ 626
YLH + +IV+RD + DFG + +S + GT Y+AP+
Sbjct: 154 YLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV 210
Query: 627 RLSPPVNQKI 636
P ++ +
Sbjct: 211 LHKQPYDRTV 220
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 455 RYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
R +G G YG VY +L + +A+K++ + DS + + E + ++H+NIV+
Sbjct: 13 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
G + E + GSL +LR ++ N K + L YLH +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 127
Query: 574 PSIVHRDXXXXXXXXXXXXEAF-VADFGTA-RLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
IVHRD ++DFGT+ RL ++ T GT Y+AP+ P
Sbjct: 128 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-TGTLQYMAPEIIDKGP 185
Query: 632 VNQKIIQDIILVSTTALACLRSKP 655
DI + T + KP
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKP 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 65
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 123
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 124 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 177
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 25/256 (9%)
Query: 378 SFNNLEGEIPTYLRDNPPNSFVGNKGLCGHVQVLAFTIFGFILLLKGKSENLKLVTGGYD 437
SF ++ LRD P S V + L + L + + F L K K N+ Y
Sbjct: 6 SFETRFEKMDNLLRD--PKSEVNSDCLLDGLDALVYDL-DFPALRKNK--NIDNFLSRYK 60
Query: 438 GKI-LYEDLINATEDFHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSET---EDSAF 492
I DL ED+ + IG G +G V KV A+K L + E DSAF
Sbjct: 61 DTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 120
Query: 493 VESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDD--EAIELN 550
F E +++ +V+L+ R ++ + EYM G L ++ + D E
Sbjct: 121 ---FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF 177
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+T V + H++ ++H D P + D +ADFGT ++ +
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK---------LADFGTCMKMNKEGM 228
Query: 611 NRTLRA-GTYGYIAPD 625
R A GT YI+P+
Sbjct: 229 VRCDTAVGTPDYISPE 244
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 8/169 (4%)
Query: 458 IGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G G +G V E G VA+K L++ + V + E + L RH +I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F + EY+ G LF + E+ R + + + A+ Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---V 132
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
VHRD A +ADFG + ++ RT G+ Y AP+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPE 180
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 455 RYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
R +G G YG VY +L + +A+K++ + DS + + E + ++H+NIV+
Sbjct: 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE---RDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
G + E + GSL +LR ++ N K + L YLH +
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 141
Query: 574 PSIVHRDXXXXXXXXXXXXEAF-VADFGTA-RLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
IVHRD ++DFGT+ RL ++ T GT Y+AP+ P
Sbjct: 142 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-TGTLQYMAPEIIDKGP 199
Query: 632 VNQKIIQDIILVSTTALACLRSKP 655
DI + T + KP
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKP 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 143
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
YLH I+HRD + DFGTA++L +S A GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 624 PD 625
P+
Sbjct: 201 PE 202
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 77
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 78 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 130
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 458 IGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G YG V K +L G A+K + +S ++ + +E VL + H NI+KLY
Sbjct: 29 LGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVN---IVKSVAHALSYLHHDC 572
F KR + + E G LF DE I V+ I+K V +YLH
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELF------DEIILRQKFSEVDAAVIMKQVLSGTTYLHKH- 140
Query: 573 TPSIVHRDXX-XXXXXXXXXXEAF--VADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+IVHRD +A + DFG + V + R GT YIAP+
Sbjct: 141 --NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE-RLGTAYYIAPE 193
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E I IG G +G VY G+V +L E ++ +++F+ E RH
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRW-HGEVAI--RLIDIERDNEDQLKAFKREVMAYRQTRHE 89
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
N+V G C+ + I + +L+ V+RD +++N TR+ I + + + YLH
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ--IAQEIVKGMGYLH 147
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR-----TLRAGTYGYIAP 624
I+H+D + + DFG + V + R ++ G ++AP
Sbjct: 148 ---AKGILHKD-LKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 625 D--QRLSPPVNQ 634
+ ++LSP +
Sbjct: 204 EIIRQLSPDTEE 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 76
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 82
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 83 RLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 135
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 136 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 73/183 (39%), Gaps = 17/183 (9%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 509 RNIVKLYGFCLH-KRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHA 564
VKLY FC ++F Y + G L +R DE +T + A
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSA 149
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYI 622
L YLH I+HRD + DFGTA++L +S GT Y+
Sbjct: 150 LEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 623 APD 625
+P+
Sbjct: 207 SPE 209
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 75
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 12/171 (7%)
Query: 458 IGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G G +G V E G VA+K L++ + V + E + L RH +I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F + EY+ G LF + E+ R + + + A+ Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCHRHM---V 132
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
VHRD A +ADFG + ++ S LR G+ Y AP+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRDSCGSPNYAAPE 180
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 74
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 75 VDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------ 127
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 82
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+L G CL I + M G L +R+ + I + +N +A ++YL
Sbjct: 83 RLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAKGMNYLEDR- 138
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 139 --RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517
+GT G V K EL G VA+K L++ + V + E + L RH +I+KLY
Sbjct: 26 VGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 518 CLHKRCMFFIYEYMERGSLF-YVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+F + EY+ G LF Y+ ++ ++ +RR + + + + Y H +
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRR--LFQQILSGVDYCHRHM---V 137
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
VHRD A +ADFG + ++ S LR G+ Y AP+
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXSCGSPNYAAPE 185
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 15/185 (8%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
+ + E+F IG G YG VYKA G+VVALKK+ + +TE + E +L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLK 60
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS---- 560
+ H NIVKL + ++ ++E++ L+D +A L + ++KS
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALTGI-PLPLIKSYLFQ 114
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
+ L++ H + ++HRD +ADFG AR V T
Sbjct: 115 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 621 YIAPD 625
Y AP+
Sbjct: 172 YRAPE 176
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 84
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+L G CL I + M G L +R+ + I + +N +A ++YL
Sbjct: 85 RLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAKGMNYLEDR- 140
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 141 --RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 81
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 82 RLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 134
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 135 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 445 LINATEDFHIRYCIGTGGYGSVYKA-ELPD-GKVVALKKLHQSETEDSAFVESFQNEA-- 500
L A + + IG G YG V+KA +L + G+ VALK++ E+ + + + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 501 RVLSTVRHRNIVKLYGFCLHKRC-----MFFIYEYMERGSLFYVLRDDDEAIELNWTRRV 555
R L T H N+V+L+ C R + ++E++++ Y+ + + + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK-- 123
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
+++ + L +LH + +VHRD + +ADFG AR+
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 80
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 81 RLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 445 LINATEDFHIRYCIGTGGYGSVYKA-ELPD-GKVVALKKLHQSETEDSAFVESFQNEA-- 500
L A + + IG G YG V+KA +L + G+ VALK++ E+ + + + A
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 501 RVLSTVRHRNIVKLYGFCLHKRC-----MFFIYEYMERGSLFYVLRDDDEAIELNWTRRV 555
R L T H N+V+L+ C R + ++E++++ Y+ + + + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK-- 123
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
+++ + L +LH + +VHRD + +ADFG AR+
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 76
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 80
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 76
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 129
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 451 DFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF +G G +G V KA D + A+KK+ +E + S + +E +L+++ H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL----SEVXLLASLNHQ 62
Query: 510 NIVKLYGFCLHKR-------------CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV- 555
+V+ Y L +R +F EY E +L+ ++ ++ LN R
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN----LNQQRDEY 118
Query: 556 -NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHV------- 607
+ + + ALSY+H + I+HR+ + DFG A+ +H
Sbjct: 119 WRLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 608 -------DSSNRTLRAGTYGYIAPD 625
S N T GT Y+A +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATE 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 15/185 (8%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
+ + E+F IG G YG VYKA G+VVALKK+ + +TE + E +L
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLK 59
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS---- 560
+ H NIVKL + ++ ++E++ L+D +A L + ++KS
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMD-----LKDFMDASALTGI-PLPLIKSYLFQ 113
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
+ L++ H + ++HRD +ADFG AR V T
Sbjct: 114 LLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 621 YIAPD 625
Y AP+
Sbjct: 171 YRAPE 175
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 80
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
V + ++ +L G CL I + M G L +R+ + I + +N +A +
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAKGM 137
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+YL +VHRD + DFG A+LL + G
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 75
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 128
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 73
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS----VA 562
H NIVKL + ++ ++E++ + L+D +A L + ++KS +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQD-----LKDFMDASALTGI-PLPLIKSYLFQLL 113
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYI 622
L++ H + ++HRD +ADFG AR V T Y
Sbjct: 114 QGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
Query: 623 APD 625
AP+
Sbjct: 171 APE 173
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + G+ VA+K + +++ ++ + F+ E R++ + H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 71
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ I EY G +F L E + + + A+ Y H
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK---FRQIVSAVQYCH 128
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + V T G+ Y AP+
Sbjct: 129 Q---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-CGSPPYAAPE 180
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 82
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+L G CL I + M G L +R+ + I + +N +A ++YL
Sbjct: 83 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAKGMNYLEDR- 138
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 139 --RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 80
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 445 LINATEDFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNE 499
++ TE I+ +G+G +G+VYK +P+G+ V A+K+L ++ + + + +E
Sbjct: 36 ILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDE 92
Query: 500 ARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRV 555
A V+++V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 151
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
A ++YL +VHRD + DFG A+LL +
Sbjct: 152 ------AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 616 AG 617
G
Sbjct: 203 GG 204
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAF---VESFQNEA--R 501
AT + IG G YG+VYKA P G VALK + + + + A R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 502 VLSTVRHRNIVKLYGFCLHKRC-----MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVN 556
L H N+V+L C R + ++E++++ Y+ + + + +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--D 124
Query: 557 IVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
+++ L +LH +C IVHRD +ADFG AR+
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 73
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 13/172 (7%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 76
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
V + ++ +L G CL I + M G L +R+ + I + +N +A +
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAKGM 133
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+YL +VHRD + DFG A+LL + G
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 86
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 87 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 139
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 140 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 80
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
+ + E+F IG G YG VYKA G+VVALKK+ + +TE + E +L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLK 61
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHA 564
+ H NIVKL + ++ ++E++ + ++ I L + + + +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQG 119
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
L++ H + ++HRD +ADFG AR V T Y AP
Sbjct: 120 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 625 D 625
+
Sbjct: 177 E 177
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 77
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 78 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYL 130
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 131 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGK----VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +PDG+ VA+K L ++ + + + +EA V++ V +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN--KEILDEAYVMAGVGSPYVS 82
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL + + M G L +R++ + LNW ++ A +SYL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYL 135
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSN 611
+VHRD + DFG ARLL +D +
Sbjct: 136 ED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 91 LNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVL 150
L+L+ N +T + +L+NL L L NN + +P L LE LYL N+L L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-L 115
Query: 151 PQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCN----------QFNG---- 196
P+++ K+L L V N + S L + + LG N F G
Sbjct: 116 PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173
Query: 197 -----------TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245
TIP+ G +LT L + NK+T ++L L +L L LSFN + +
Sbjct: 174 SYIRIADTNITTIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231
Query: 246 IPLEIGNFSALAELDLSDNKI 266
+ N L EL L++NK+
Sbjct: 232 DNGSLANTPHLRELHLNNNKL 252
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 45/270 (16%)
Query: 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161
+PK++ + +L L NN + + +L+NL L L +NK+S +
Sbjct: 46 VPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI------------ 91
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
P L LERL+L NQ +P ++ K L L + N++T
Sbjct: 92 ------------SPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKV 136
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELD---LSDNKI----RGIIPDEX 274
S L ++ ++L N L S +E G F + +L ++D I +G+ P
Sbjct: 137 RKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT 195
Query: 275 XXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALN 334
++ L NL L LS N +S + N L+ L LN
Sbjct: 196 ELHLDGNKITKVDAA-------SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248
Query: 335 HNSLDGTIPPEIGKILLLQNLDLSHNNLSG 364
+N L +P + +Q + L +NN+S
Sbjct: 249 NNKL-VKVPGGLADHKYIQVVYLHNNNISA 277
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 80 PQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRN---L 136
PQ G +L L+L N +T + L NL L LS NS+ + ++ GSL N L
Sbjct: 187 PQ-GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI---SAVDNGSLANTPHL 242
Query: 137 EELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
EL+L +NKL V G L ++ V+Y
Sbjct: 243 RELHLNNNKLVKV----PGGLADHKYIQVVY 269
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 91 LNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVL 150
L+L+ N +T + +L+NL L L NN + +P L LE LYL N+L L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-L 115
Query: 151 PQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCN----------QFNG---- 196
P+++ K+L L V N + S L + + LG N F G
Sbjct: 116 PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173
Query: 197 -----------TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245
TIP+ G +LT L + NK+T ++L L +L L LSFN + +
Sbjct: 174 SYIRIADTNITTIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAV 231
Query: 246 IPLEIGNFSALAELDLSDNKI 266
+ N L EL L++NK+
Sbjct: 232 DNGSLANTPHLRELHLNNNKL 252
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 45/270 (16%)
Query: 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161
+PK++ + +L L NN + + +L+NL L L +NK+S +
Sbjct: 46 VPKDLPP--DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI------------ 91
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
P L LERL+L NQ +P ++ K L L + N++T
Sbjct: 92 ------------SPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKV 136
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELD---LSDNKI----RGIIPDEX 274
S L ++ ++L N L S +E G F + +L ++D I +G+ P
Sbjct: 137 RKSVFNGLNQMIVVELGTNPLKSS-GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT 195
Query: 275 XXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALN 334
++ L NL L LS N +S + N L+ L LN
Sbjct: 196 ELHLDGNKITKVDAA-------SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248
Query: 335 HNSLDGTIPPEIGKILLLQNLDLSHNNLSG 364
+N L +P + +Q + L +NN+S
Sbjct: 249 NNKL-VKVPGGLADHKYIQVVYLHNNNISA 277
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 80 PQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRN---L 136
PQ G +L L+L N +T + L NL L LS NS+ + ++ GSL N L
Sbjct: 187 PQ-GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI---SAVDNGSLANTPHL 242
Query: 137 EELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
EL+L +NKL V G L ++ V+Y
Sbjct: 243 RELHLNNNKLVKV----PGGLADHKYIQVVY 269
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
+ + E+F IG G YG VYKA G+VVALKK+ + +TE + E +L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLK 60
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHA 564
+ H NIVKL + ++ ++E++ + ++ I L + + + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
L++ H + ++HRD +ADFG AR V T Y AP
Sbjct: 119 LAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 625 D 625
+
Sbjct: 176 E 176
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 90
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+L G CL I + M G L +R+ + I + +N +A ++YL
Sbjct: 91 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAKGMNYLEDR- 146
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 147 --RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 458 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+KA G+ VALKK+ E E F + E ++L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM-ENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 517 FCLHK-----RC---MFFIYEYMER---GSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
C K RC ++ ++++ E G L VL ++ + +++ + + L
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGL 138
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
Y+H + I+HRD +ADFG AR
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 146
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
YLH I+HRD + DFGTA++L +S + GT Y++
Sbjct: 147 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 624 PD 625
P+
Sbjct: 204 PE 205
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G V A + GK+VA+KK+ + + E NE ++ +H N+V++Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 95
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ + E++E G+L ++ +N + + +V ALS LH +
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GV 148
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD ++DFG + + R GT ++AP+
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 197
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 130 IGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLF 188
I L N+ L L NKL + + L +L +L + N + +P+ +F +LTNL+ L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELV 115
Query: 189 LGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPL 248
L NQ L NLT+L + N+L LT+L LDL NQL S
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEG 175
Query: 249 EIGNFSALAELDLSDNKIRGIIPD 272
+ L +L L+DN+++ +PD
Sbjct: 176 VFDKLTQLKQLSLNDNQLKS-VPD 198
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 82 IGSLSNLKYL-NLRWNNLTGTIPKEIGSLR---NLEVLYLSNNSLHGTTPIEIGSLRNLE 137
I S+ ++YL N+R+ L G +I +L+ NL L L+ N L L NL+
Sbjct: 53 IKSVQGIQYLPNVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112
Query: 138 ELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNG 196
EL L N+L + L +L +L + +N + +P +F +LTNL RL L NQ
Sbjct: 113 ELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQS-LPKGVFDKLTNLTRLDLDNNQLQS 171
Query: 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYL 235
L L LS+ N+L LTSL ++
Sbjct: 172 LPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHI 210
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
I L N+ +L++ NKL S L LT+L YL L+ NQL S + L EL L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 262 SDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAI-GKLFNLVSLDLSKNKLSGSFPT 320
+N+++ + PD +P + KL NL LDL N+L S P
Sbjct: 117 VENQLQSL-PDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPE 174
Query: 321 GI-GNCTELQHLALNHNSL 338
G+ T+L+ L+LN N L
Sbjct: 175 GVFDKLTQLKQLSLNDNQL 193
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 106 IGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP----QEIGNLKSLI 161
I L N+ L L N LH + ++ L NL L L N+L LP ++ NLK L+
Sbjct: 59 IQYLPNVRYLALGGNKLHDISALK--ELTNLTYLILTGNQLQS-LPNGVFDKLTNLKELV 115
Query: 162 WLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTG 220
+ + +P +F +LTNL L+L NQ L NLT L + N+L
Sbjct: 116 LVENQLQS----LPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQS 171
Query: 221 AIPSTLGHLTSLLYLDLSFNQLHS 244
LT L L L+ NQL S
Sbjct: 172 LPEGVFDKLTQLKQLSLNDNQLKS 195
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G V A + GK+VA+KK+ + + E NE ++ +H N+V++Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 88
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ + E++E G+L ++ +N + + +V ALS LH +
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLH---AQGV 141
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD ++DFG + + R GT ++AP+
Sbjct: 142 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 190
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 458 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+KA G+ VALKK+ E E F + E ++L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM-ENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 517 FCLHK-----RC---MFFIYEYMER---GSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
C K RC ++ ++++ E G L VL ++ + +++ + + L
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGL 138
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
Y+H + I+HRD +ADFG AR
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G V A + GK+VA+KK+ + + E NE ++ +H N+V++Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 84
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ + E++E G+L ++ +N + + +V ALS LH +
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GV 137
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD ++DFG + + R GT ++AP+
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 186
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 123
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 124 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 178
Query: 622 IAPD 625
++P+
Sbjct: 179 VSPE 182
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 458 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+KA G+ VALKK+ E E F + E ++L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM-ENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 517 FCLHK-----RC---MFFIYEYMER---GSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
C K RC ++ ++++ E G L VL ++ + +++ + + L
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGL 138
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
Y+H + I+HRD +ADFG AR
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + GK VA+K + +++ S+ + F+ E R++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ + EY G +F L E + + + A+ Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + + T G+ Y AP+
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPE 182
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYT------AEIVSAL 145
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
YLH I+HRD + DFGTA++L +S + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 624 PD 625
P+
Sbjct: 203 PE 204
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + GK VA+K + +++ S+ + F+ E R++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ + EY G +F L E + + + A+ Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + + T G+ Y AP+
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPE 182
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 447 NATEDFHIRYCIGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVES-FQNEARVL 503
N + F +G+G + V+ K L GK+ ALK + +S AF +S +NE VL
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKS----PAFRDSSLENEIAVL 60
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAH 563
++H NIV L + + + + G LF + + E + + +++ V
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL---VIQQVLS 117
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXE---AFVADFGTARLLHVDSSNRTLRAGTYG 620
A+ YLH + IVHRD E + DFG +++ + + GT G
Sbjct: 118 AVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ--NGIMSTACGTPG 172
Query: 621 YIAPDQRLSPPVNQKIIQDIILVSTTALAC 650
Y+AP+ P ++ + I V T L C
Sbjct: 173 YVAPEVLAQKPYSKAVDCWSIGVITYILLC 202
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 145
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 200
Query: 622 IAPD 625
++P+
Sbjct: 201 VSPE 204
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G V A + GK+VA+KK+ + + E NE ++ +H N+V++Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 93
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ + E++E G+L ++ +N + + +V ALS LH +
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GV 146
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD ++DFG + + R GT ++AP+
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 195
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLST 505
+D + +G G +G V + E P GK V A+K L ++ F E + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ HRN+++LYG L M + E GSL LR L R + VA +
Sbjct: 78 LDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYI 622
YL + +HRD + DFG R L + + + R + +
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 623 APD 625
AP+
Sbjct: 192 APE 194
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 148
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 149 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 203
Query: 622 IAPD 625
++P+
Sbjct: 204 VSPE 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E + I +G GG +VY AE + VA+K + E ++ F+ E S + H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDD-----DEAIELNWTRRVNIVKSVAH 563
+NIV + C + + EY+E +L + D AI N+T + I+ + H
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI--NFTNQ--ILDGIKH 126
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA-GTYGYI 622
A HD IVHRD + DFG A+ L S +T GT Y
Sbjct: 127 A-----HDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179
Query: 623 APDQ 626
+P+Q
Sbjct: 180 SPEQ 183
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEIXINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 22/170 (12%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV---VALKKLHQSETEDSAFVESFQNEARVLSTV- 506
D + IG G +G V KA + + A+K++ + ++D F E VL +
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 83
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD-------------DDEAIELNWTR 553
H NI+ L G C H+ ++ EY G+L LR + A L+ +
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
++ VA + YL +HRD A +ADFG +R
Sbjct: 144 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLST 505
+D + +G G +G V + E P GK V A+K L ++ F E + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ HRN+++LYG L M + E GSL LR L R + VA +
Sbjct: 68 LDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYI 622
YL + +HRD + DFG R L + + + R + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 623 APD 625
AP+
Sbjct: 182 APE 184
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G V A + GK+VA+KK+ + + E NE ++ +H N+V++Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 138
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ + E++E G+L ++ +N + + +V ALS LH +
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GV 191
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD ++DFG + + R GT ++AP+
Sbjct: 192 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 240
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 458 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G V+KA G+ VALKK+ E E F + E ++L ++H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLM-ENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 517 FCLHK-----RC---MFFIYEYMER---GSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
C K RC ++ ++++ E G L VL ++ + +++ + + L
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL------VKFTLSEIKRVMQMLLNGL 137
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
Y+H + I+HRD +ADFG AR
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 146
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 147 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 201
Query: 622 IAPD 625
++P+
Sbjct: 202 VSPE 205
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G+G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 74
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 75 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 127
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 128 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G+VY A ++ + +VVA+KK+ S + + + E R L +RH N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 517 FCLHKRCMFFIYEYM--ERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
L + + + EY L V + + +E+ + L+YLH +
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLH---SH 173
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+++HRD + DFG+A ++ + GT ++AP+
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPE 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD---DDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 122
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 123 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 177
Query: 622 IAPD 625
++P+
Sbjct: 178 VSPE 181
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 22/170 (12%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV---VALKKLHQSETEDSAFVESFQNEARVLSTV- 506
D + IG G +G V KA + + A+K++ + ++D F E VL +
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 73
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD-------------DDEAIELNWTR 553
H NI+ L G C H+ ++ EY G+L LR + A L+ +
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
++ VA + YL +HRD A +ADFG +R
Sbjct: 134 LLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 120 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 145
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 200
Query: 622 IAPD 625
++P+
Sbjct: 201 VSPE 204
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ ++ IG G + V A + G+ VA+K + +++ ++ + F+ E R++ + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ + EY G +F L E + + + A+ Y H
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + V + T G+ Y AP+
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF-CGSPPYAAPE 183
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD---DDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 120
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 121 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 175
Query: 622 IAPD 625
++P+
Sbjct: 176 VSPE 179
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 145
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 200
Query: 622 IAPD 625
++P+
Sbjct: 201 VSPE 204
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 31/183 (16%)
Query: 461 GGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST--VRHRNIVKLYGFC 518
G +G V+KA+L + VA+K + + S+Q+E + ST ++H N+++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQ------SWQSEREIFSTPGMKHENLLQF--IA 76
Query: 519 LHKRC------MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
KR ++ I + ++GSL L+ + + W ++ ++++ LSYLH D
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHEDV 132
Query: 573 --------TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS--SNRTLRAGTYGYI 622
PSI HRD A +ADFG A + + GT Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 623 APD 625
AP+
Sbjct: 193 APE 195
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 70/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINAMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 17/183 (9%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I IG G +G V +L + KV A+K L++ E A F+ E VL
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVL-----RDDDEAIELNWTRRVNIVKSVAH 563
+ I L+ ++ + +Y G L +L R +E V + SV H
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV-H 192
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTA-RLLHVDSSNRTLRAGTYGYI 622
L Y+H D P + D +ADFG+ +L+ + ++ GT YI
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIR---------LADFGSCLKLMEDGTVQSSVAVGTPDYI 243
Query: 623 APD 625
+P+
Sbjct: 244 SPE 246
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 145
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 200
Query: 622 IAPD 625
++P+
Sbjct: 201 VSPE 204
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S + H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNI 110
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 31/204 (15%)
Query: 451 DFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF IG+GG+G V+KA+ DGK +K++ + E + E + L+ + H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHV 64
Query: 510 NIVKLYGFCL-----------------HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWT 552
NIV Y C +C+F E+ ++G+L + + +L+
Sbjct: 65 NIVH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKV 122
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR 612
+ + + + + Y+H + +++RD + + DFG L D R
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-GKR 178
Query: 613 TLRAGTYGYIAPDQRLSPPVNQKI 636
GT Y++P+Q S +++
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEV 202
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 18/183 (9%)
Query: 452 FHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHR 509
F + +G G YG VYK + G++ A+K + + E+ E + E +L HR
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHR 81
Query: 510 NIVKLYGFCLHKR------CMFFIYEYMERGSLFYVLRDDD-EAIELNWTRRVNIVKSVA 562
NI YG + K ++ + E+ GS+ ++++ ++ W I + +
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREIL 139
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYI 622
LS+LH ++HRD E + DFG + L R GT ++
Sbjct: 140 RGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 623 APD 625
AP+
Sbjct: 197 APE 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 120 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 119 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 143
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 198
Query: 622 IAPD 625
++P+
Sbjct: 199 VSPE 202
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 145
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 200
Query: 622 IAPD 625
++P+
Sbjct: 201 VSPE 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD---DDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 121
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 122 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 176
Query: 622 IAPD 625
++P+
Sbjct: 177 VSPE 180
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 447 NATEDFHIRY----CIGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
++T F RY +G G +G V K ++ G+ A+K + + + + ES E
Sbjct: 19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREV 77
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
++L + H NI+KLY F K + + E G LF + E++ R I++
Sbjct: 78 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQ 134
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTL-RA 616
V ++Y+H + IVHRD + + DFG + H ++S + +
Sbjct: 135 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI 189
Query: 617 GTYGYIAPD 625
GT YIAP+
Sbjct: 190 GTAYYIAPE 198
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + GK VA+K + +++ S+ + F+ E R++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ + EY G +F L E + + + A+ Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFG 600
IVHRD +ADFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFG 158
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 143
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 198
Query: 622 IAPD 625
++P+
Sbjct: 199 VSPE 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 452 FHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
F + +GTG + V AE GK+ A+K + + + S +NE VL ++H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE--SSIENEIAVLRKIKHEN 81
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVN---IVKSVAHALSY 567
IV L ++ + + + G LF D +E + + +++ V A+ Y
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELF------DRIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEA---FVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
LH IVHRD E ++DFG +++ T GT GY+AP
Sbjct: 136 LHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA-CGTPGYVAP 191
Query: 625 DQRLSPPVNQKI 636
+ P ++ +
Sbjct: 192 EVLAQKPYSKAV 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 447 NATEDFHIRY----CIGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
++T F RY +G G +G V K ++ G+ A+K + + + + ES E
Sbjct: 42 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREV 100
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
++L + H NI+KLY F K + + E G LF + E++ R I++
Sbjct: 101 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQ 157
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTL-RA 616
V ++Y+H + IVHRD + + DFG + H ++S + +
Sbjct: 158 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI 212
Query: 617 GTYGYIAPD 625
GT YIAP+
Sbjct: 213 GTAYYIAPE 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 142
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
YLH I+HRD + DFGTA++L +S + GT Y++
Sbjct: 143 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 624 PD 625
P+
Sbjct: 200 PE 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 62
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T Y AP+
Sbjct: 121 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 447 NATEDFHIRY----CIGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
++T F RY +G G +G V K ++ G+ A+K + + + + ES E
Sbjct: 25 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREV 83
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
++L + H NI+KLY F K + + E G LF + E++ R I++
Sbjct: 84 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQ 140
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTL-RA 616
V ++Y+H + IVHRD + + DFG + H ++S + +
Sbjct: 141 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI 195
Query: 617 GTYGYIAPD 625
GT YIAP+
Sbjct: 196 GTAYYIAPE 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 447 NATEDFHIRY----CIGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
++T F RY +G G +G V K ++ G+ A+K + + + + ES E
Sbjct: 43 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREV 101
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
++L + H NI+KLY F K + + E G LF + E++ R I++
Sbjct: 102 QLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQ 158
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTL-RA 616
V ++Y+H + IVHRD + + DFG + H ++S + +
Sbjct: 159 VLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKI 213
Query: 617 GTYGYIAPD 625
GT YIAP+
Sbjct: 214 GTAYYIAPE 222
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 62
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++++ ++ I L + + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 121 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 176
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 119 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T Y AP+
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G V A + GK+VA+KK+ + + E NE ++ +H N+V++Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 215
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ + E++E G+L ++ +N + + +V ALS LH +
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAAVCLAVLQALSVLHAQ---GV 268
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD ++DFG + + R GT ++AP+
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE 317
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G+VY A ++ + +VVA+KK+ S + + + E R L +RH N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 517 FCLHKRCMFFIYEYM--ERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
L + + + EY L V + + +E+ + L+YLH +
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAYLH---SH 134
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+++HRD + DFG+A ++ + GT ++AP+
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPE 181
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 61
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 120 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 175
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVALKK+ + +TE + E +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T Y AP+
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 172
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLST 505
+D + +G G +G V + E P GK V A+K L ++ F E + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ HRN+++LYG L M + E GSL LR L R + VA +
Sbjct: 78 LDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 134
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYI 622
YL + +HRD + DFG R L + + + R + +
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 623 APD 625
AP+
Sbjct: 192 APE 194
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S + H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNI 96
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLST 505
+D + +G G +G V + E P GK V A+K L ++ F E + +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ HRN+++LYG L M + E GSL LR L R + VA +
Sbjct: 72 LDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYI 622
YL + +HRD + DFG R L + + + R + +
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 623 APD 625
AP+
Sbjct: 186 APE 188
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL--DFLMEALIISKFNHQNI 110
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 7/181 (3%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
+ + E+F IG G YG VYKA G+VVALKK+ + +TE + E +L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLK 60
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHA 564
+ H NIVKL + ++ ++E++ ++ I L + + + +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
L++ H + ++HRD +ADFG AR V T Y AP
Sbjct: 119 LAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 625 D 625
+
Sbjct: 176 E 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 59
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ + ++ I L + + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 118 FCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 173
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 110
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 63
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKAE----LPDGKVVALKKLHQS----ETEDSAFVESFQNEAR 501
E F + +G GGYG V++ GK+ A+K L ++ +D+A ++ +N
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--- 73
Query: 502 VLSTVRHRNIVKL-YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
+L V+H IV L Y F + ++ I EY+ G LF L + E I + T + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE- 129
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
++ AL +LH I++RD + DFG + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 621 YIAPD 625
Y+AP+
Sbjct: 187 YMAPE 191
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVAL K+ + +TE + E +L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNH 61
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 120 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 173
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
E+F IG G YG VYKA G+VVAL K+ + +TE + E +L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNH 60
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NIVKL + ++ ++E++ + ++ I L + + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + ++HRD +ADFG AR V T T Y AP+
Sbjct: 119 H---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPE 172
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLST 505
+D + +G G +G V + E P GK V A+K L ++ F E + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ HRN+++LYG L M + E GSL LR L R + VA +
Sbjct: 68 LDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYI 622
YL + +HRD + DFG R L + + + R + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 623 APD 625
AP+
Sbjct: 182 APE 184
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ I +G G +G V A G+ VALK +++ S + E L +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+I+KLY K + + EY Y+++ D +++ + + A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + ++ D + G+ Y AP+
Sbjct: 131 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPE 182
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 72/182 (39%), Gaps = 15/182 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 142
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDS--SNRTLRAGTYGYIA 623
YLH I+HRD + DFGTA++L +S + GT Y++
Sbjct: 143 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 624 PD 625
P+
Sbjct: 200 PE 201
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 87
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 148 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ I +G G +G V A G+ VALK +++ S + E L +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+I+KLY K + + EY Y+++ D +++ + + A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 120
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + ++ D + G+ Y AP+
Sbjct: 121 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPE 172
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ I +G G +G V A G+ VALK +++ S + E L +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+I+KLY K + + EY Y+++ D +++ + + A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 124
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + ++ D + G+ Y AP+
Sbjct: 125 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPE 176
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 95
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 136
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNRTLRAGTY 619
L + +HRD VA DFG AR ++ RAG Y
Sbjct: 197 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--------RAGYY 240
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 71/182 (39%), Gaps = 15/182 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + +V A EL + A+K L + V E V+S + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 127
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIA 623
YLH I+HRD + DFGTA++L +S GT Y++
Sbjct: 128 EYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 624 PD 625
P+
Sbjct: 185 PE 186
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKAE----LPDGKVVALKKLHQS----ETEDSAFVESFQNEAR 501
E F + +G GGYG V++ GK+ A+K L ++ +D+A ++ +N
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--- 73
Query: 502 VLSTVRHRNIVKL-YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
+L V+H IV L Y F + ++ I EY+ G LF L + E I + T + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE- 129
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
++ AL +LH I++RD + DFG + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 621 YIAPD 625
Y+AP+
Sbjct: 187 YMAPE 191
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLST 505
+D + +G G +G V + E P GK V A+K L ++ F E + +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ HRN+++LYG L M + E GSL LR L R + VA +
Sbjct: 72 LDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 128
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYI 622
YL + +HRD + DFG R L + + + R + +
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 623 APD 625
AP+
Sbjct: 186 APE 188
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 13/183 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLST 505
+D + +G G +G V + E P GK V A+K L ++ F E + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ HRN+++LYG L M + E GSL LR L R + VA +
Sbjct: 68 LDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYI 622
YL + +HRD + DFG R L + + + R + +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 623 APD 625
AP+
Sbjct: 182 APE 184
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 4/190 (2%)
Query: 439 KILYEDL-INATEDFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESF 496
K L D+ N +F I IG G + VY+A L DG VALKK+ + D+
Sbjct: 20 KALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADC 79
Query: 497 QNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVN 556
E +L + H N++K Y + + + E + G L +++ + L R
Sbjct: 80 IKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER--T 137
Query: 557 IVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA 616
+ K S L H + ++HRD + D G R ++
Sbjct: 138 VWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV 197
Query: 617 GTYGYIAPDQ 626
GT Y++P++
Sbjct: 198 GTPYYMSPER 207
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 95
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 16/187 (8%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALK--KLHQSETEDSAFVESFQNEARV 502
++++ F +G G Y +VYK G VALK KL E S + E +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR----EISL 56
Query: 503 LSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYV----LRDDDEAIELNWTRRVNIV 558
+ ++H NIV+LY + + ++E+M+ Y+ + + +ELN +
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW- 115
Query: 559 KSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ L++ H + I+HRD + + DFG AR + + + T
Sbjct: 116 -QLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVT 171
Query: 619 YGYIAPD 625
Y APD
Sbjct: 172 LWYRAPD 178
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ I +G G +G V A G+ VALK +++ S + E L +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
+I+KLY K + + EY Y+++ D +++ + + A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 129
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + ++ D + G+ Y AP+
Sbjct: 130 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPE 181
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 61
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 118
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 119 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 112
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 173 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 113
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNRTLRAGTY 619
L + +HRD VA DFG AR ++ RAG Y
Sbjct: 174 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--------RAGYY 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + GK VA++ + +++ S+ + F+ E R++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ + EY G +F L E + + + A+ Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + + T G+ Y AP+
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPE 182
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G YG V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 13/189 (6%)
Query: 452 FHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ R +GTG + V AE K+VA+K + + E S +NE VL ++H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
IV L ++ I + + G LF + + E + +R ++ V A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 571 DCTPSIVHRDXXXXXXXXXXXXEA---FVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
IVHRD E ++DFG +++ S T GT GY+AP+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPGYVAPEVL 190
Query: 628 LSPPVNQKI 636
P ++ +
Sbjct: 191 AQKPYSKAV 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506
+ E+F IG G YG VYKA G+VVALKK+ + +TE + E +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKEL 60
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H NIVKL + ++ ++E++ ++ I L + + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ H + ++HRD +ADFG AR V T Y AP+
Sbjct: 119 FCH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPE 174
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 102
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 163 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 82/199 (41%), Gaps = 12/199 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G VYK + +VVA+K + E +E Q E VLS I + +G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
L ++ I EY+ GS +L+ L T I++ + L YLH +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSERK--- 137
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
+HRD + +ADFG A L R GT ++AP+ + K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK- 196
Query: 637 IQDIILVSTTALACLRSKP 655
DI + TA+ + +P
Sbjct: 197 -ADIWSLGITAIELAKGEP 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 108
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 166
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 202
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 96
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 458 IGTGGYGSVYKA-ELPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRN 510
+G G +G V +A GK VA+K L + D E+ +E +++S + +H N
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 103
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------DDDEAIELNWTRRVNIVKSVAH 563
IV L G C H + I EY G L LR D ++ L ++ VA
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+++L + + +HRD A + DFG AR + DS+
Sbjct: 164 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 13/189 (6%)
Query: 452 FHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ R +GTG + V AE K+VA+K + + E S +NE VL ++H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHPN 77
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
IV L ++ I + + G LF + + E + +R ++ V A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 571 DCTPSIVHRDXXXXXXXXXXXXEA---FVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
IVHRD E ++DFG +++ S T GT GY+AP+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVL 190
Query: 628 LSPPVNQKI 636
P ++ +
Sbjct: 191 AQKPYSKAV 199
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 458 IGTGGYGSVYK--AELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G G Y +VYK ++L D +VALK++ + E E+ A + + E +L ++H NIV L+
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEI-RLEHEEGAPCTAIR-EVSLLKDLKHANIVTLH 66
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
++ + ++EY+++ Y+ DD +N + + L+Y H
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHRQ---K 120
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
++HRD E +ADFG AR + + T Y PD
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + GK VA++ + +++ S+ + F+ E R++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHP 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ + EY G +F L E + + + A+ Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCH 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFG 600
IVHRD +ADFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFG 158
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 109
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 167
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 203
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F + +G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 80
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 9/176 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + G+ VA+K + +++ ++ + F+ E R++ + H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHP 74
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ I EY G +F L E + + + A+ Y H
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK---FRQIVSAVQYCH 131
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
IVHRD +ADFG + V G Y AP+
Sbjct: 132 Q---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF-CGAPPYAAPE 183
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 89
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 147
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 183
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G G YG VYKA + + VA+K++ + E E+ + E +L ++HRNI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV--AHALSYLHHDCTP 574
H + I+EY E Y+ ++ D ++ + + ++ V H+ LH D P
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKP 160
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
++ + DFG AR + T T Y P+
Sbjct: 161 ----QNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G+VY A ++ G+ VA+++++ + + NE V+ ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 85
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDD--DEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
L ++ + EY+ GSL V+ + DE + + + AL +LH +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSN--- 136
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
++HRD + DFG + + S R+ GT ++AP+
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 187
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 73/184 (39%), Gaps = 19/184 (10%)
Query: 450 EDFHIRYCIGTGGYGS-VYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF +G G + + V EL + A+K L + V E V+S + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR---DDDEAIELNWTRRVNIVKSVAHAL 565
VKLY ++F Y + G L +R DE +T + AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT------AEIVSAL 143
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA----GTYGY 621
YLH I+HRD + DFGTA++L +S + RA GT Y
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQY 198
Query: 622 IAPD 625
++P+
Sbjct: 199 VSPE 202
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 44/207 (21%)
Query: 451 DFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF IG+GG+G V+KA+ DGK ++++ + E + E + L+ + H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKAEREVKALAKLDHV 65
Query: 510 NIVKLYGFCL------------------------------HKRCMFFIYEYMERGSLFYV 539
NIV Y C +C+F E+ ++G+L
Sbjct: 66 NIVH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 540 LRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADF 599
+ + +L+ + + + + + Y+H + ++HRD + + DF
Sbjct: 125 I-EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 600 GTARLLHVDSSNRTLRAGTYGYIAPDQ 626
G L D RT GT Y++P+Q
Sbjct: 181 GLVTSLKND-GKRTRSKGTLRYMSPEQ 206
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G+VY A ++ G+ VA+++++ + + NE V+ ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDD--DEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
L ++ + EY+ GSL V+ + DE + + + AL +LH +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSN--- 135
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
++HRD + DFG + + S R+ GT ++AP+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE 186
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F + +G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMAS 80
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSV 561
V + ++ +L G CL I + M G L +R+ + I LNW ++
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 133
Query: 562 AHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
A ++YL +VHRD + DFG A+LL + G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 122
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG AR ++ S R
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 7/169 (4%)
Query: 458 IGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+ ++ D K V A K + +S E E + ++ H+++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F +F + E R SL L +A+ R ++ + YLH + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RV 162
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD E + DFG A + D + + GT YIAP+
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 13/189 (6%)
Query: 452 FHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ R +GTG + V AE K+VA+K + + E S +NE VL ++H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
IV L ++ I + + G LF + + E + +R ++ V A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 571 DCTPSIVHRDXXXXXXXXXXXXEA---FVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
IVHRD E ++DFG +++ S T GT GY+AP+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVL 190
Query: 628 LSPPVNQKI 636
P ++ +
Sbjct: 191 AQKPYSKAV 199
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 458 IGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG+V+KA+ + ++VALK++ + + +D S E +L ++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS----VAHALSYLHHDC 572
+ + ++E+ ++ Y N IVKS + L + H
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYF-------DSCNGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ +++HRD E +ADFG AR + + T Y PD
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPD 171
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G+VY A ++ G+ VA+++++ + + NE V+ ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDD--DEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
L ++ + EY+ GSL V+ + DE + + + AL +LH +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSN--- 135
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
++HRD + DFG + + S R+ GT ++AP+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 186
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 13/189 (6%)
Query: 452 FHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ R +GTG + V AE K+VA+K + + E S +NE VL ++H N
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
IV L ++ I + + G LF + + E + +R ++ V A+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH- 133
Query: 571 DCTPSIVHRDXXXXXXXXXXXXE---AFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
IVHRD E ++DFG +++ S T GT GY+AP+
Sbjct: 134 --DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVL 190
Query: 628 LSPPVNQKI 636
P ++ +
Sbjct: 191 AQKPYSKAV 199
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 7/169 (4%)
Query: 458 IGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+ ++ D K V A K + +S E E + ++ H+++V +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F +F + E R SL L +A+ R ++ + YLH + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RV 160
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD E + DFG A + D + + GT YIAP+
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 148
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 13/172 (7%)
Query: 451 DFHIRYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLST 505
+F +G+G +G+VYK +P+G+ V A+ +L ++ + + + +EA V+++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN--KEILDEAYVMAS 107
Query: 506 VRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
V + ++ +L G CL I + M G L +R+ + I + +N +A +
Sbjct: 108 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQIAKGM 164
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+YL +VHRD + DFG A+LL + G
Sbjct: 165 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 22/170 (12%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGKV---VALKKLHQSETEDSAFVESFQNEARVLSTV- 506
D + IG G +G V KA + + A+K++ + ++D F E VL +
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLG 80
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD-------------DDEAIELNWTR 553
H NI+ L G C H+ ++ EY G+L LR + A L+ +
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
++ VA + YL +HR+ A +ADFG +R
Sbjct: 141 LLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 82
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 140
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 176
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 458 IGTGGYGSVYKA-ELPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRN 510
+G G +G V +A GK VA+K L + D E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------DDDEAIELNWTRRVNIVKSVAH 563
IV L G C H + I EY G L LR D ++ L ++ VA
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+++L + + +HRD A + DFG AR + DS+
Sbjct: 172 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVV----ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+ +G +G+VYK +P+G+ V A+K+L ++ + + + +EA V+++V + ++
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPHVC 80
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G CL I + M G L +R+ + I LNW ++ A ++YL
Sbjct: 81 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYL 133
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+VHRD + DFG A+LL + G
Sbjct: 134 EDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 24/188 (12%)
Query: 458 IGTGGYG-SVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G +G ++ DG+ +K+++ S ES + E VL+ ++H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYRE 90
Query: 517 FCLHKRCMFFIYEYMERGSLFY-------VLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
++ + +Y E G LF VL +D+ L+W ++ + AL ++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI--LDWFVQICL------ALKHVH 142
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIAPDQR 627
I+HRD + DFG AR+L +S+ RA GT Y++P+
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYLSPEIC 197
Query: 628 LSPPVNQK 635
+ P N K
Sbjct: 198 ENKPYNNK 205
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 89
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 147
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 183
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 88
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 146
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 182
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 148
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
L + VHRD VADFG AR
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
++ + IG G + V A + GK VA+K + +++ S+ + F+ E R+ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHP 73
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NIVKL+ ++ ++ + EY G +F L E + + + A+ Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK---FRQIVSAVQYCH 130
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFG 600
IVHRD +ADFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFG 158
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 20/188 (10%)
Query: 452 FHIRYCIGTGGYGSVYK-AELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ I +GTG +G V++ E G A K + D E+ + E + +S +RH
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQTMSVLRHPT 215
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD------DDEAIELNWTRRVNIVKSVAHA 564
+V L+ M IYE+M G LF + D +DEA+E + R+V H
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGLCHMHE 273
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
+Y+H D P + E + DFG L S + + GT + AP
Sbjct: 274 NNYVHLDLKPENI-------MFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAP 325
Query: 625 DQRLSPPV 632
+ PV
Sbjct: 326 EVAEGKPV 333
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 87
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + Y
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKY 145
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 8/154 (5%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
H IG G +G VY L DGK + + D V F E ++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 511 IVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
++ L G CL + YM+ G L +R++ + + VA + YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL- 144
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ VHRD VADFG AR
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 7/169 (4%)
Query: 458 IGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+ ++ D K V A K + +S E E + ++ H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F +F + E R SL L +A+ R ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--LRQIVLGCQYLHRN---RV 138
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD E + DFG A + D + GT YIAP+
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 187
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G+VY A ++ G+ VA+++++ + + NE V+ ++ NIV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDD--DEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
L ++ + EY+ GSL V+ + DE + + + AL +LH +
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSN--- 135
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
++HRD + DFG + + S R+ GT ++AP+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE 186
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 7/169 (4%)
Query: 458 IGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+ ++ D K V A K + +S E E + ++ H+++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F +F + E R SL L +A+ R ++ + YLH + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RV 136
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD E + DFG A + D + + GT YIAP+
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE 185
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 20/188 (10%)
Query: 452 FHIRYCIGTGGYGSVYK-AELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ I +GTG +G V++ E G A K + D E+ + E + +S +RH
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQTMSVLRHPT 109
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRD------DDEAIELNWTRRVNIVKSVAHA 564
+V L+ M IYE+M G LF + D +DEA+E + R+V H
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE--YMRQVCKGLCHMHE 167
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
+Y+H D P + E + DFG L S + + GT + AP
Sbjct: 168 NNYVHLDLKPENI-------MFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAP 219
Query: 625 DQRLSPPV 632
+ PV
Sbjct: 220 EVAEGKPV 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 7/169 (4%)
Query: 458 IGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+ ++ D K V A K + +S E E + ++ H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F +F + E R SL L +A+ R ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RV 138
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD E + DFG A + D + GT YIAP+
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 187
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 117/266 (43%), Gaps = 40/266 (15%)
Query: 77 SIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136
++P +I + L L+L+ N+++ + L++L L L NN + LR L
Sbjct: 47 AVPKEISPDTTL--LDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKL 104
Query: 137 EELYLRSNKLSGVLPQEIGNL-KSLIWLSVMYNTVGGPIPSTLFR-LTNLERLFLGCNQF 194
++LY+ N L + P NL SL+ L + N + +P +F L N+ + +G N
Sbjct: 105 QKLYISKNHLVEIPP----NLPSSLVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPL 159
Query: 195 --NGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGN 252
+G P LK L +L I KLTG IP L + L+LD N++ + ++
Sbjct: 160 ENSGFEPGAFDGLK-LNYLRISEAKLTG-IPKDLPETLNELHLD--HNKIQAIELEDLLR 215
Query: 253 FSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKN 312
+S L L L N+IR I G + F L L L L N
Sbjct: 216 YSKLYRLGLGHNQIRMI--------------------ENGSLSF----LPTLRELHLDNN 251
Query: 313 KLSGSFPTGIGNCTELQHLALNHNSL 338
KLS P G+ + LQ + L+ N++
Sbjct: 252 KLS-RVPAGLPDLKLLQVVYLHTNNI 276
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 16/161 (9%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 149
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRR--VNIVKSVAHAL 565
N++ L G CL + YM+ G L +R++ N T + + VA +
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGM 205
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
+L + VHRD VADFG AR ++
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+D+ ++ IG+G V A P + VA+K+++ + + S ++ E + +S H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHH 72
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLF-----YVLRDDDEAIELNWTRRVNIVKSVAH 563
NIV Y + K ++ + + + GS+ V + + ++ L+ + I++ V
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHV--DSSNRTLR---AGT 618
L YLH + +HRD +ADFG + L D + +R GT
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 619 YGYIAPD 625
++AP+
Sbjct: 190 PCWMAPE 196
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 19/189 (10%)
Query: 447 NATEDFHIRY----CIGTGGYGSVY--KAELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
++T F RY +G G +G V K ++ G+ A+K + + + + ES E
Sbjct: 19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREV 77
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
++L + H NI KLY F K + + E G LF DE I V+ +
Sbjct: 78 QLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELF------DEIISRKRFSEVDAARI 131
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTL-RA 616
+ LS + + IVHRD + + DFG + H ++S + +
Sbjct: 132 IRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKI 189
Query: 617 GTYGYIAPD 625
GT YIAP+
Sbjct: 190 GTAYYIAPE 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 450 EDFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+D+ ++ IG+G V A P + VA+K+++ + + S ++ E + +S H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHH 67
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLF-----YVLRDDDEAIELNWTRRVNIVKSVAH 563
NIV Y + K ++ + + + GS+ V + + ++ L+ + I++ V
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHV--DSSNRTLR---AGT 618
L YLH + +HRD +ADFG + L D + +R GT
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 619 YGYIAPD 625
++AP+
Sbjct: 185 PCWMAPE 191
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 7/169 (4%)
Query: 458 IGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+ ++ D K V A K + +S E E + ++ H+++V +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
F +F + E R SL L +A+ R ++ + YLH + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEAR--YYLRQIVLGCQYLHRN---RV 142
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+HRD E + DFG A + D + GT YIAP+
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE 191
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 11/172 (6%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKL---HQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
+G G + +VYKA + ++VA+KK+ H+SE +D + + E ++L + H NI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQELSHPNIIG 76
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
L HK + ++++ME L +++D+ + + + ++ L YLH
Sbjct: 77 LLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLHQHW- 132
Query: 574 PSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
I+HRD +ADFG A+ + + T Y AP+
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPE 182
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 91
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKF 149
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
L + VHRD VADFG AR
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 68/168 (40%), Gaps = 18/168 (10%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G G +G VY+ ++ P VA+K L + +E F EA ++S H+NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNI 96
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRD----DDEAIELNWTRRVNIVKSVAHALSY 567
V+ G L F + E M G L LR+ + L +++ + +A Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVA---DFGTARLLHVDSSNR 612
L + +HRD VA DFG A+ ++ S R
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQ-SETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G +G V + VA+K + + S +ED F EA+ + + H +VK YG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFF-----QEAQTMMKLSHPKLVKFYG 70
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
C + ++ + EY+ G L LR + +E ++ + + V +++L +
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--SQLLEMCYDVCEGMAFLE---SHQF 125
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLL 605
+HRD V+DFG R +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYV 154
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 8/154 (5%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
H IG G +G VY L DGK + + D V F E ++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 511 IVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
++ L G CL + YM+ G L +R++ + + VA + +L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKFL- 154
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ VHRD VADFG AR
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKF 148
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 91
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKF 149
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
L + VHRD VADFG AR
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 90
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKF 148
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
L + VHRD VADFG AR ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 452 FHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFV--ESFQNEARVLSTVRHR 509
F + +G+G +G V+ L + + L+++ ++ +D + V E + E VL ++ H
Sbjct: 24 FIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLF-YVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
NI+K++ M+ + E E G L ++ L+ ++K + +AL+Y
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 569 HHDCTPSIVHRDXXXX---XXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + +VH+D + DFG A L D + T AGT Y+AP+
Sbjct: 141 H---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPE 196
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G G+VY A ++ G+ VA+++++ + + NE V+ ++ NIV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 85
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDD--DEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
L ++ + EY+ GSL V+ + DE + + + AL +LH +
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSN--- 136
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
++HR+ + DFG + + S R+ GT ++AP+
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE 187
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL-HVDSSNRT 613
+ +A + YL + +HRD +ADFG AR + ++D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 453 HIRYCIGTGGYGSVYKAEL--PDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY L DGK + A+K L++ D V F E ++ H
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDIGEVSQFLTEGIIMKDFSH 88
Query: 509 RNIVKLYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
N++ L G CL + YM+ G L +R++ + + VA + +
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKF 146
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
L + VHRD VADFG AR
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 458 IGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG+V+KA+ + ++VALK++ + + +D S E +L ++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS----VAHALSYLHHDC 572
+ + ++E+ ++ Y N IVKS + L + H
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYF-------DSCNGDLDPEIVKSFLFQLLKGLGFCH--- 118
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ +++HRD E +A+FG AR + + T Y PD
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 124 GTTPIE-IGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIP--STLFR 180
G T IE I L NL L L+ N+++ + P + NL + L + G P+ S +
Sbjct: 58 GVTTIEGIQYLNNLIGLELKDNQITDLTP--LKNLTKITELELS----GNPLKNVSAIAG 111
Query: 181 LTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFN 240
L +++ L L Q P + L NL L + N++T P L LT+L YL + N
Sbjct: 112 LQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNN 167
Query: 241 QLHSFIPLEIGNFSALAELDLSDNKIRGIIP 271
Q++ PL N S L L DNKI I P
Sbjct: 168 QVNDLTPL--ANLSKLTTLRADDNKISDISP 196
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
I L ++K L+L +T P + L NL+VLYL N + +P + L NL+ L +
Sbjct: 109 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 164
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
+N+++ + P + NL L L N + P L L NL + L NQ + P
Sbjct: 165 GNNQVNDLTP--LANLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDVSP-- 218
Query: 202 IGNLKNLTHLSIIT 215
L NL++L I+T
Sbjct: 219 ---LANLSNLFIVT 229
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL-HVDSSNRT 613
+ +A + YL + +HRD +ADFG AR + ++D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 458 IGTGGYGSVYKA-ELPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRN 510
+G G +G V +A GK VA+K L + D E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE-----------LNWTRRVNIVK 559
IV L G C H + I EY G L LR +E L+ ++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
VA +++L + + +HRD A + DFG AR + DS+
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Query: 442 YEDLINATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
Y++L+ E + IGTGG+ V A + G++VA+K + ++ + + + E
Sbjct: 5 YDELLKYYE---LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEI 59
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLF-YVLRDDDEAIELNWTRRVNIVK 559
L +RH++I +LY +F + EY G LF Y++ D + E IV
Sbjct: 60 EALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS 119
Query: 560 SVA--HALSYLHHDCTPS 575
+VA H+ Y H D P
Sbjct: 120 AVAYVHSQGYAHRDLKPE 137
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLY 515
+G G YG V+K+ + G+VVA+KK+ + + +F+ E +L+ + H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 516 GF--CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
+ R ++ +++YME L V+R A L + +V + + YLH +
Sbjct: 76 NVLRADNDRDVYLVFDYME-TDLHAVIR----ANILEPVHKQYVVYQLIKVIKYLH---S 127
Query: 574 PSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
++HRD VADFG +R
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE+ + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEED--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 68/170 (40%), Gaps = 21/170 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRN 510
+G G +G V +A GK VA+K L + D E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
IV L G C H + I EY G L LR +E + I S A LH
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD--PAFAIANSTASTRDLLHF 169
Query: 571 D----------CTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ + +HRD A + DFG AR + DS+
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 11/180 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + +G G G V A + VA+K + D E+ + E + +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLN 62
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H N+VK YG + EY G LF + D E + R + + Y
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR--AGTYGYIAPD 625
LH I HRD ++DFG A + ++ R L GT Y+AP+
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 15/184 (8%)
Query: 450 EDFHIRYCIGTGGYGSVY---KAELPD-GKVVALKKLHQSE-TEDSAFVESFQNEARVLS 504
E+F + +GTG YG V+ K D GK+ A+K L ++ + + E + E +VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 505 TVRHRNIVKLYGFCLHKRC-MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI-VKSVA 562
+R + + + I +Y+ G LF L + E V I V +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE----HEVQIYVGEIV 169
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGY 621
AL +LH I++RD + DFG ++ D + R GT Y
Sbjct: 170 LALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 622 IAPD 625
+APD
Sbjct: 227 MAPD 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G +G VYK L + VA+K L + + E F++EA + + ++H N+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSL--FYVLR---------DDDEAIE--LNWTRRVNIV 558
V L G + + I+ Y G L F V+R DDD ++ L V++V
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 559 KSVAHALSYL--HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL 614
+A + YL HH +VH+D ++D G R ++ + L
Sbjct: 152 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 457 CIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQ---NEARVLSTVRHRNIV 512
+G+G +G+V+K +P+G+ + + + ED + +SFQ + + ++ H +IV
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKV-IEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G C + + +Y+ GSL +R A+ LNW ++ A + YL
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSN 611
+VHR+ + VADFG A LL D
Sbjct: 150 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
>pdb|4AW4|A Chain A, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|B Chain B, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|C Chain C, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 106 IGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSV 165
I L NL L LSNN + +PI+ L N+ +L+L NKL+ + P + NLK+L WL +
Sbjct: 62 IQYLPNLTSLNLSNNQITDISPIQY--LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 117
Query: 166 MYNTVGGPIPSTLFRLTNLERL-FLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPS 224
N V + L G + NG + +L L L + NK+T +
Sbjct: 118 DENKVKDLSSLKDLKKLKSLSLEHNGISDINGLV-----HLPQLESLYLGNNKITDI--T 170
Query: 225 TLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L LT L L L NQ+ +PL + L L LS N I +
Sbjct: 171 VLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKNHISDL 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 19/163 (11%)
Query: 457 CIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQ---NEARVLSTVRHRNIV 512
+G+G +G+V+K +P+G+ + + + ED + +SFQ + + ++ H +IV
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKV-IEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE----LNWTRRVNIVKSVAHALSYL 568
+L G C + + +Y+ GSL +R A+ LNW ++ A + YL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSN 611
+VHR+ + VADFG A LL D
Sbjct: 132 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 458 IGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI 511
+G +G VYK L + VA+K L + + E F++EA + + ++H N+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSL--FYVLR---------DDDEAIE--LNWTRRVNIV 558
V L G + + I+ Y G L F V+R DDD ++ L V++V
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 559 KSVAHALSYL--HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL 614
+A + YL HH +VH+D ++D G R ++ + L
Sbjct: 135 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 47/225 (20%)
Query: 411 LAFTIFGFILLLKGKSE--NLKLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYK 468
L+ ++ F +L K E LV G G+ + ++ AT FH++ G GY +V
Sbjct: 3 LSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATA-FHLK---GRAGYTTV-- 56
Query: 469 AELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528
V + K + S +E + +E VL V H +++KLYG C + I
Sbjct: 57 -------AVKMLKENASPSE----LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105
Query: 529 EYMERGSLFYVLRD-----------------------DDEAIELNWTRRVNIVKSVAHAL 565
EY + GSL LR+ D+ A+ + ++ ++ +
Sbjct: 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG--DLISFAWQISQGM 163
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
YL S+VHRD + ++DFG +R ++ + S
Sbjct: 164 QYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 458 IGTGGYGSVYKA-ELPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRN 510
+G G +G V +A GK VA+K L + D E+ +E +++S + +H N
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 96
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAI--------------------ELN 550
IV L G C H + I EY G L LR EA+ L
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
++ VA +++L + + +HRD A + DFG AR + DS+
Sbjct: 157 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H++Y +G G +GSV L D G +VA+K+L S + FQ E ++
Sbjct: 9 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 65
Query: 503 LSTVRHRNIVKLYG--FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L + IVK G + ++ + + EY+ G L L+ L+ +R +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 123
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL + VHRD +ADFG A+LL +D +R
Sbjct: 124 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 175
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 20/170 (11%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 64
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ + +A ++YL+ + VHRD + DFG R
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
T+++ + +G G + V + ++P G+ A K ++ + + + EAR+ ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLK 61
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H NIV+L+ + + +++ + G LF ++ + + + + L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILES 115
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTYGYIAP 624
++H IVHRD + +ADFG A + D AGT GY++P
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 625 DQRLSPPVNQKI 636
+ P + +
Sbjct: 176 EVLRKDPYGKPV 187
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H++Y +G G +GSV L D G +VA+K+L S + FQ E ++
Sbjct: 8 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 64
Query: 503 LSTVRHRNIVKLYG--FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L + IVK G + ++ + + EY+ G L L+ L+ +R +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 122
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL + VHRD +ADFG A+LL +D +R
Sbjct: 123 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 174
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H++Y +G G +GSV L D G +VA+K+L S + FQ E ++
Sbjct: 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 77
Query: 503 LSTVRHRNIVKLYG--FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L + IVK G + ++ + + EY+ G L L+ L+ +R +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 135
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL + VHRD +ADFG A+LL +D +R
Sbjct: 136 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 437 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 489
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 532
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
T+++ + +G G + V + ++P G+ A K ++ + + + EAR+ ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLK 61
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H NIV+L+ + + +++ + G LF ++ + + + + L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILES 115
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTYGYIAP 624
++H IVHRD + +ADFG A + D AGT GY++P
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 625 DQRLSPPVNQKI 636
+ P + +
Sbjct: 176 EVLRKDPYGKPV 187
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 438 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 490
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 533
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 134
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 66
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 180
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 181 YRKGGKGLL-PVRWMSP 196
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 79 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 131
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--XYKAQTHG 174
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLF-YVLRDDDEAIELNWTRR------------V 555
+NI+ L G C ++ I EY +G+L Y+ + +E ++ V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 88 LKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLS 147
L L L N+LT +P EI +L NL VL LS+N L + P E+GS L+ Y N ++
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDNMVT 306
Query: 148 GVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRL 181
LP E GNL +L +L V G P+ ++
Sbjct: 307 -TLPWEFGNLCNLQFLGVE----GNPLEKQFLKI 335
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLL 233
I + +F+ L RL+L N +P EI NL NL L + N+LT ++P+ LG L
Sbjct: 239 ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLK 296
Query: 234 YLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIR 267
Y F+ + + +P E GN L L + N +
Sbjct: 297 YFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPLE 329
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 293 QIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLL 352
++P I L NL LDLS N+L+ S P +G+C +L++ N + T+P E G + L
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMV-TTLPWEFGNLCNL 318
Query: 353 QNLDLSHNNLSGTIPMTLHPMFLDMSFNNLEGEIPTYLRDNPP 395
Q L + N L FL + + YLRDN P
Sbjct: 319 QFLGVEGN--------PLEKQFLKILTEKSVTGLIFYLRDNRP 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 77 SIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136
S+P ++GS LKY ++N+ T+P E G+L NL+ L + N P+E L+ L
Sbjct: 284 SLPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGN------PLEKQFLKIL 336
Query: 137 EE-------LYLRSNKLSGVLPQE 153
E YLR N+ LP E
Sbjct: 337 TEKSVTGLIFYLRDNRPEIPLPHE 360
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 72
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 186
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 187 YRKGGKGLL-PVRWMSP 202
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS---LRNLEELYLRS 143
N +YLNL+ N++ LR+LE+L LS N + IE+G+ L +L L L
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRK---IEVGAFNGLPSLNTLELFD 92
Query: 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLG---------CNQ 193
N+L+ V Q L L L + N + IPS F R+ +L RL LG
Sbjct: 93 NRLTTVPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAA 151
Query: 194 FNGTIPRE-----IGNLKNLTHLSIIT---------NKLTGAIPSTLGHLTSLLYLDLSF 239
F G + + NLK++ +L+ + N+L P + LTSL L L
Sbjct: 152 FEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 211
Query: 240 NQLHSFIPLEIGNFSALAELDLSDNKIRGIIPD 272
Q+ + + +L EL+LS N + + D
Sbjct: 212 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 244
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 73/201 (36%), Gaps = 1/201 (0%)
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
+L++ N++ T L +LE L L N L +L L + N+LT
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 98
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXX 281
+L+ L L L N + S +L LDL + K I +
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 158
Query: 282 XXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGT 341
IP + L L L+LS N+L P T L+ L L H +
Sbjct: 159 RYLNLGMCNLKDIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATI 217
Query: 342 IPPEIGKILLLQNLDLSHNNL 362
+ L+ L+LSHNNL
Sbjct: 218 ERNAFDDLKSLEELNLSHNNL 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 83/231 (35%), Gaps = 41/231 (17%)
Query: 432 VTGGYDGKILYEDLINATEDFHIRY---------CIGTGGYGSVYKAEL----PDGKVVA 478
VTG D + Y D D + +G+G +G V A G +
Sbjct: 18 VTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ 77
Query: 479 LKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFFIYEYMERGSLF 537
+ E DS+ E+ +E ++++ + H NIV L G C ++ I+EY G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 538 YVLRDDDEA-----IELNWTRRVN---------------IVKSVAHALSYLHHDCTPSIV 577
LR E IE +R+ VA + +L S V
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCV 194
Query: 578 HRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT---YGYIAPD 625
HRD + DFG AR + D SN +R ++AP+
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSD-SNYVVRGNARLPVKWMAPE 244
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 146
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 460 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL 519
G YG +++ E+ + L K H++ + ESF A ++S + H+++V YG C+
Sbjct: 32 VGDYGQLHETEV---LLKVLDKAHRN------YSESFFEAASMMSKLSHKHLVLNYGVCV 82
Query: 520 HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD 571
+ E+++ GSL L+ + I + W ++ + K +A A+ +L +
Sbjct: 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEEN 132
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 66
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY---ETDY 180
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 181 YRKGGKGLL-PVRWMSP 196
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I IG G +G V ++ + ++ A+K L++ E A F+ E VL
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR-----RVNIVKSVAH 563
+ I L+ + ++ + +Y G L +L ++ + + R V + S+ H
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI-H 208
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS-NRTLRAGTYGYI 622
L Y+H D P V D +ADFG+ ++ D + ++ GT YI
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIR---------LADFGSCLKMNDDGTVQSSVAVGTPDYI 259
Query: 623 APD 625
+P+
Sbjct: 260 SPE 262
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 20/170 (11%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 73
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ + +A ++YL+ + VHRD + DFG R
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 70
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 184
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 185 YRKGGKGLL-PVRWMSP 200
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
EDF I IG G +G V ++ + ++ A+K L++ E A F+ E VL
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR-----RVNIVKSVAH 563
+ I L+ + ++ + +Y G L +L ++ + + R V + S+ H
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI-H 192
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS-NRTLRAGTYGYI 622
L Y+H D P V D +ADFG+ ++ D + ++ GT YI
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIR---------LADFGSCLKMNDDGTVQSSVAVGTPDYI 243
Query: 623 APD 625
+P+
Sbjct: 244 SPE 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 89
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 458 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+ V E L DG ALK++ E +D E Q EA + H NI++L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR---EEAQREADMHRLFNHPNILRLVA 93
Query: 517 FCLHKRC----MFFIYEYMERGSLF-YVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD 571
+CL +R + + + +RG+L+ + R D+ L + + ++ + L +H
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH-- 151
Query: 572 CTPSIVHRDXXXXXXXXXXXXEAFVADFGT--ARLLHVDSSNRTL-------RAGTYGYI 622
HRD + + D G+ +HV+ S + L + T Y
Sbjct: 152 -AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 623 APD 625
AP+
Sbjct: 211 APE 213
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 92
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 87
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I EY +G+L LR D + E T + V
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 85 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 137
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 180
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 93 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 145
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 188
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 79 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 131
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 174
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 79
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 193
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 194 YRKGGKGLL-PVRWMSP 209
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYK------AELPDGKVVA---LKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+G GG+ Y+ E+ GKVV L K HQ E E + ++ +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--------KMSTEIAIHKSLDN 101
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
++V +GF ++ + E R SL L +A+ R ++ + YL
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYL 158
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H++ ++HRD + + DFG A + D + GT YIAP+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 17/175 (9%)
Query: 450 EDFHIRYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETEDSAFVESFQNEARV 502
E+ H++Y +G G +GSV L D G +VA+K+L S + FQ E ++
Sbjct: 5 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ---RDFQREIQI 61
Query: 503 LSTVRHRNIVKLYG--FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKS 560
L + IVK G + + + + EY+ G L L+ L+ +R +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQ 119
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ + YL + VHRD +ADFG A+LL +D +R
Sbjct: 120 ICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR 171
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYK------AELPDGKVVA---LKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+G GG+ Y+ E+ GKVV L K HQ E E + ++ +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--------KMSTEIAIHKSLDN 101
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
++V +GF ++ + E R SL L +A+ R ++ + YL
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYL 158
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H++ ++HRD + + DFG A + D + GT YIAP+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 73 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 125
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 168
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 11/179 (6%)
Query: 89 KYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSG 148
+ L+L N + E S +LE L L+ N + P +L NL L LRSN+L
Sbjct: 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 94
Query: 149 VLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNL 208
+ L +L L + N + + L NL+ L +G N R L +L
Sbjct: 95 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 154
Query: 209 THLSIITNKLTGAIPSTLGHLTSLLYL-----------DLSFNQLHSFIPLEIGNFSAL 256
L++ LT L HL L+ L D SF +L+ LEI ++ L
Sbjct: 155 EQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
LSNL L++ N + + L NL+ L + +N L + L +LE+L L
Sbjct: 103 LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGN 204
L+ + + + +L LI L + + + + RL L+ L + + T+
Sbjct: 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 222
Query: 205 LKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDN 264
NLT LSI LT + HL L +L+LS+N + + + L E+ L
Sbjct: 223 GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGG 282
Query: 265 KIRGIIP 271
++ + P
Sbjct: 283 QLAVVEP 289
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 31/112 (27%)
Query: 221 AIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXX 280
A+P + T LL DL N++ + E +F L EL+L++N + + P
Sbjct: 25 AVPEGIPTETRLL--DLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPG-------- 74
Query: 281 XXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLS----GSFPTGIGNCTEL 328
A LFNL +L L N+L G F TG+ N T+L
Sbjct: 75 ----------------AFNNLFNLRTLGLRSNRLKLIPLGVF-TGLSNLTKL 109
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 73
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 187
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 188 YRKGGKGLL-PVRWMSP 203
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 72
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 186
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 187 YRKGGKGLL-PVRWMSP 202
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 183 NLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQL 242
++ L+L NQF +P+E+ N K+LT + + N+++ + ++T LL L LS+N+L
Sbjct: 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 243 HSFIPLEIGNFSALAELDLSDNKIRGIIPD 272
P +L L L N I ++P+
Sbjct: 91 RCIPPRTFDGLKSLRLLSLHGNDI-SVVPE 119
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161
+PK I R++ LYL N P E+ + ++L + L +N++S + Q N+ L+
Sbjct: 25 LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
L + YN + P T L +L L L N + +L L+HL+I N L
Sbjct: 82 TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS---LRNLEELYLRS 143
N +YLNL+ N++ LR+LE+L LS N + IE+G+ L +L L L
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRK---IEVGAFNGLPSLNTLELFD 92
Query: 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLG---------CNQ 193
N+L+ V Q L L L + N + IPS F R+ +L RL LG
Sbjct: 93 NRLTTVPTQAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLRRLDLGELKRLEYISEAA 151
Query: 194 FNGTIPRE-----IGNLKNLTHLSIIT---------NKLTGAIPSTLGHLTSLLYLDLSF 239
F G + + NLK++ +L+ + N+L P + LTSL L L
Sbjct: 152 FEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 211
Query: 240 NQLHSFIPLEIGNFSALAELDLSDNKIRGIIPD 272
Q+ + + +L EL+LS N + + D
Sbjct: 212 AQVATIERNAFDDLKSLEELNLSHNNLMSLPHD 244
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 73/201 (36%), Gaps = 1/201 (0%)
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
+L++ N++ T L +LE L L N L +L L + N+LT
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 98
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXX 281
+L+ L L L N + S +L LDL + K I +
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 158
Query: 282 XXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGT 341
IP + L L L+LS N+L P T L+ L L H +
Sbjct: 159 RYLNLGMCNLKDIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATI 217
Query: 342 IPPEIGKILLLQNLDLSHNNL 362
+ L+ L+LSHNNL
Sbjct: 218 ERNAFDDLKSLEELNLSHNNL 238
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 78
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 460 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL 519
G YG +++ E+ + L K H++ + ESF A ++S + H+++V YG C
Sbjct: 32 VGDYGQLHETEV---LLKVLDKAHRN------YSESFFEAASMMSKLSHKHLVLNYGVCF 82
Query: 520 HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD 571
+ E+++ GSL L+ + I + W ++ + K +A A+ +L +
Sbjct: 83 CGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEEN 132
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 82
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 93
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 69
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR A+ N ++
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 183
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 184 YRKGGKGLL-PVRWMSP 199
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 79
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR A+ N ++
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 140 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 193
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 194 YRKGGKGLL-PVRWMSP 209
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 85
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 47/225 (20%)
Query: 411 LAFTIFGFILLLKGKSE--NLKLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYK 468
L+ ++ F +L K E LV G G+ + ++ AT FH++ G GY +V
Sbjct: 3 LSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATA-FHLK---GRAGYTTV-- 56
Query: 469 AELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528
V + K + S +E + +E VL V H +++KLYG C + I
Sbjct: 57 -------AVKMLKENASPSE----LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105
Query: 529 EYMERGSLFYVLRD-----------------------DDEAIELNWTRRVNIVKSVAHAL 565
EY + GSL LR+ D+ A+ + ++ ++ +
Sbjct: 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG--DLISFAWQISQGM 163
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
YL +VHRD + ++DFG +R ++ + S
Sbjct: 164 QYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 75 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 127
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 170
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 95 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 147
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 190
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Query: 458 IGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+G+G +G+V K ++ K+ ++E D A + EA V+ + + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G C + M + E E G L L+ + + N + +V V+ + YL +
Sbjct: 95 GICEAESWML-VMEMAELGPLNKYLQQNRHVKDKN---IIELVHQVSMGMKYLEES---N 147
Query: 576 IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYG 620
VHRD A ++DFG ++ L D + +A T+G
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHG 190
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 458 IGTGGYGSVYKAE---LPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE L K VA+K L TE + +E ++ + +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEMMKMIGKH 86
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-------------DDDEAIELNWTRRV 555
+NI+ L G C ++ I EY +G+L L+ + +L+ V
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR-LLHVDSSNRT 613
+ VA + YL + +HRD +ADFG AR + H+D +T
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 24/197 (12%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKA-------ELPDGKVVALKKLHQSETEDSAFVESFQNEA 500
A E + +G G +G VY+ + P+ +V A+K ++++ + F NEA
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI--EFLNEA 101
Query: 501 RVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN-------WTR 553
V+ ++V+L G + I E M RG L LR +E N ++
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRT 613
+ + +A ++YL+ + VHRD + DFG R ++
Sbjct: 162 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY---ETDY 215
Query: 614 LRAGTYGYIAPDQRLSP 630
R G G + P + +SP
Sbjct: 216 YRKGGKG-LLPVRWMSP 231
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 90/225 (40%), Gaps = 47/225 (20%)
Query: 411 LAFTIFGFILLLKGKSE--NLKLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYK 468
L+ ++ F +L K E LV G G+ + ++ AT FH++ G GY +V
Sbjct: 3 LSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATA-FHLK---GRAGYTTV-- 56
Query: 469 AELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528
V + K + S +E + +E VL V H +++KLYG C + I
Sbjct: 57 -------AVKMLKENASPSE----LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105
Query: 529 EYMERGSLFYVLRD-----------------------DDEAIELNWTRRVNIVKSVAHAL 565
EY + GSL LR+ D+ A+ + ++ ++ +
Sbjct: 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG--DLISFAWQISQGM 163
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
YL +VHRD + ++DFG +R ++ + S
Sbjct: 164 QYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 457 CIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G V++A+L + VA+KK+ Q + F+N E +++ V+H N+V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQD--------KRFKNRELQIMRIVKHPNVVDLK 98
Query: 516 GFCL----HKRCMF--FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK----SVAHAL 565
F K +F + EY+ V R +L T + ++K + +L
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPET----VYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAF-VADFGTARLLHVDSSNRTLRAGTYGYIAP 624
+Y+H + I HRD + DFG+A++L N + Y Y AP
Sbjct: 155 AYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAP 210
Query: 625 D 625
+
Sbjct: 211 E 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 26/178 (14%)
Query: 458 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G G +G V+K E G +A K + +D E +NE V++ + H N+++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANLIQLYD 153
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVA------HALSYLHH 570
K + + EY++ G LF R DE+ L + +K + H + LH
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD--RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 571 DCTPS---IVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
D P V+RD + DFG AR + + GT ++AP+
Sbjct: 212 DLKPENILCVNRDAKQIK----------IIDFGLAR-RYKPREKLKVNFGTPEFLAPE 258
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYK------AELPDGKVVA---LKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+G GG+ Y+ E+ GKVV L K HQ E E + ++ +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--------KMSTEIAIHKSLDN 85
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
++V +GF ++ + E R SL L +A+ R ++ + YL
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYL 142
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H++ ++HRD + + DFG A + D + GT YIAP+
Sbjct: 143 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 196
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 14/174 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV---VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKL 514
+G G +GSV + K VA+K L Q + A E EA+++ + + IV+L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 515 YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
G C + + E G L L E I + + ++ V+ + YL
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEK--- 129
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTY--GYIAPD 625
+ VHRD A ++DFG ++ L D S T R AG + + AP+
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 39/196 (19%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS---LRNLEEL 139
G +N + LNL N + LR+LE+L LS N + IEIG+ L NL L
Sbjct: 61 GISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT---IEIGAFNGLANLNTL 117
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTI 198
L N+L+ + L L L + N + IPS F R+ +L RL
Sbjct: 118 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSLRRL----------- 165
Query: 199 PREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALA- 257
++G LK L+++S GA L++L YL+L+ L EI N + L
Sbjct: 166 --DLGELKRLSYIS------EGAFEG----LSNLRYLNLAMCNLR-----EIPNLTPLIK 208
Query: 258 --ELDLSDNKIRGIIP 271
ELDLS N + I P
Sbjct: 209 LDELDLSGNHLSAIRP 224
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
LSNL+YLNL NL IP + L L+ L LS N L P L +L++L++ +
Sbjct: 184 LSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFR-LTNLERLFLGCNQFN 195
++ + NL+SL+ +++ +N + +P LF L +LER+ L N +N
Sbjct: 242 QIQVIERNAFDNLQSLVEINLAHNNLTL-LPHDLFTPLHHLERIHLHHNPWN 292
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 224 STLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAEL---DLSDNKIRGIIPDEXXXXXXX 280
++ HL L L LS N + + +EIG F+ LA L +L DN++ IP+
Sbjct: 82 NSFKHLRHLEILQLSRNHIRT---IEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSK 137
Query: 281 XXXXXXXXXXXGQIP-FAIGKLFNLVSLDLSK-NKLSGSFPTGIGNCTELQHLALNHNSL 338
IP +A ++ +L LDL + +LS + L++L L +L
Sbjct: 138 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197
Query: 339 DGTIPPEIGKILLLQNLDLSHNNLSGTIP 367
P + ++ L LDLS N+LS P
Sbjct: 198 REI--PNLTPLIKLDELDLSGNHLSAIRP 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 28/178 (15%)
Query: 458 IGTGGYGSVYKAELPDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
IG G +G V K + G + A KK+ + ED V+ F+ E ++ ++ H NI++LY
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLY 72
Query: 516 GFCLHKRCMFFIYEYMERGSLF------YVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
++ + E G LF V R+ D A I+K V A++Y H
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSAVAYCH 123
Query: 570 HDCTPSIVHRDXXXX---XXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
++ HRD + DFG A RT + GT Y++P
Sbjct: 124 K---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGTPYYVSP 177
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYK------AELPDGKVVA---LKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+G GG+ Y+ E+ GKVV L K HQ E E + ++ +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE--------KMSTEIAIHKSLDN 101
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
++V +GF ++ + E R SL L +A+ R ++ + YL
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEAR--YFMRQTIQGVQYL 158
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H++ ++HRD + + DFG A + D + GT YIAP+
Sbjct: 159 HNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 212
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 17/177 (9%)
Query: 454 IRYCIGTGGYGSV-----YKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
IR +G G +G V YK + + VALK + + + S + E L +RH
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
+I+KLY + + EY G LF + + E R + + A+ Y
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRR---FFQQIICAIEYC 124
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H IVHRD +ADFG + ++ D + G+ Y AP+
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPE 177
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I Y +G+L LR D + E T + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 28/178 (15%)
Query: 458 IGTGGYGSVYKAELPDGKVV--ALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
IG G +G V K + G + A KK+ + ED V+ F+ E ++ ++ H NI++LY
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLY 89
Query: 516 GFCLHKRCMFFIYEYMERGSLF------YVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
++ + E G LF V R+ D A I+K V A++Y H
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSAVAYCH 140
Query: 570 HDCTPSIVHRDXXXX---XXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
++ HRD + DFG A RT + GT Y++P
Sbjct: 141 K---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGTPYYVSP 194
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGT-TPIEIGSLRNLEELYLR 142
SL NL YL++ + L +LEVL ++ NS P LRNL L L
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 143 SNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPR 200
+L + P +L SL L++ N + +P +F RLT+L++++L N ++ + PR
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 23/111 (20%)
Query: 108 SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
SL +L L L+ N + L +L++L L+ + IG+LK+L L+V +
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133
Query: 168 NTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
N + F+L P NL NL HL + +NK+
Sbjct: 134 NLIQS------FKL-----------------PEYFSNLTNLEHLDLSSNKI 161
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ IGTG +G V +
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 471 -LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
YM G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIK 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
VADFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
IGTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EYM G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D VADFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 458 IGTGGYGSVYKA-ELPDGK-----VVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRN 510
+G G +G V +A GK VA+K L + D E+ +E +++S + +H N
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLGQHEN 111
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLF-YVLRDDDEAIELNWTRRVN------------I 557
IV L G C H + I EY G L ++ R +E ++ N
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
VA +++L + + +HRD A + DFG AR + DS+
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 74/194 (38%), Gaps = 42/194 (21%)
Query: 458 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST--VRHRNIVKLY 515
IG G YG+VYK L D + VA+K A ++F NE + + H NI +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVF------SFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 516 ----GFCLHKRCMF-FIYEYMERGSL--FYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
R + + EY GSL + L D W + SV L+YL
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTRGLAYL 127
Query: 569 HHDC------TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR------- 615
H + P+I HRD ++DFG + L + NR +R
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL---TGNRLVRPGEEDNA 184
Query: 616 ----AGTYGYIAPD 625
GT Y+AP+
Sbjct: 185 AISEVGTIRYMAPE 198
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 20/198 (10%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
E + I +G G +G V++ K + K + + D V + E +L+ RHR
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV---KKEISILNIARHR 61
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
NI+ L+ + I+E++ +F R + A ELN V+ V V AL +LH
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFE--RINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 570 HDCTPSIVHRDXXXXXXXXXXXXEAFVA--DFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627
+ +I H D + + +FG AR L + R L + AP+
Sbjct: 120 ---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL------FTAPEY- 169
Query: 628 LSPPVNQKIIQDIILVST 645
+P V+Q D++ +T
Sbjct: 170 YAPEVHQ---HDVVSTAT 184
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 28/200 (14%)
Query: 447 NATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST 505
N + DF ++ +G G YG V A P G++VA+KK+ + F E ++L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 506 VRHRNIVKLYGFCLHKRC-----MFFIYEYME----RGSLFYVLRDDDEAIELNWTRRVN 556
+H NI+ ++ ++ I E M+ R +L DD + T R
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR-- 123
Query: 557 IVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH---VDSSNRT 613
A+ LH +++HRD + V DFG AR++ D+S T
Sbjct: 124 -------AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 614 -LRAGTYGYIAPDQRLSPPV 632
++G Y+A +P V
Sbjct: 174 GQQSGMTEYVATRWYRAPEV 193
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 27/168 (16%)
Query: 458 IGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RH 508
+G G +G V AE + VA+K L TE + +E ++ + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKH 100
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLR-----------DDDEAIELNWTRR--V 555
+NI+ L G C ++ I Y +G+L LR D + E T + V
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ +A + YL + +HRD +ADFG AR
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 55/230 (23%)
Query: 445 LINATEDFHIRYCIGTGGYGSVYKA------ELPDGKVVALKKLHQSETEDSAFVESFQN 498
L+ + +H++ IG G YG V A + K++ K+ Q +D VE +
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKD---VERIKT 77
Query: 499 EARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSL---FYVLRDD------------ 543
E R++ + H NI +LY ++ + + E G L V DD
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 544 ---------DEAI---------ELNWTRR----VNIVKSVAHALSYLHHDCTPSIVHRDX 581
+EAI L++ +R NI++ + AL YLH+ I HRD
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDI 194
Query: 582 X--XXXXXXXXXXEAFVADFGTARLLHV----DSSNRTLRAGTYGYIAPD 625
E + DFG ++ + + T +AGT ++AP+
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE 244
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 14/165 (8%)
Query: 458 IGTGGYGSV----YKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G G +G V Y E + G+ VA+K L + + E +L + H NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIV 86
Query: 513 KLYGFCLHK--RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
K G C + I E++ GSL L + I N +++ + + YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLG- 143
Query: 571 DCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ VHRD + + DFG + + D T++
Sbjct: 144 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 53/138 (38%)
Query: 79 PPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
P L L L+L L P L L+ LYL +N+L L NL
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 139 LYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTI 198
L+L N++S V + L SL L + N V P L L L+L N +
Sbjct: 157 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 216
Query: 199 PREIGNLKNLTHLSIITN 216
+ L+ L +L + N
Sbjct: 217 TEALAPLRALQYLRLNDN 234
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 75/194 (38%), Gaps = 3/194 (1%)
Query: 77 SIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136
++P I + S +L+ N ++ + RNL +L+L +N L L L
Sbjct: 24 AVPVGIPAASQRIFLH--GNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 81
Query: 137 EELYLRSN-KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
E+L L N +L V P L L L + + P L L+ L+L N
Sbjct: 82 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 141
Query: 196 GTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSA 255
+L NLTHL + N+++ L SL L L N++ P +
Sbjct: 142 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 201
Query: 256 LAELDLSDNKIRGI 269
L L L N + +
Sbjct: 202 LMTLYLFANNLSAL 215
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 75/216 (34%), Gaps = 3/216 (1%)
Query: 123 HGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLT 182
G + +G + ++L N++S V ++L L + N + + L
Sbjct: 20 QGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 79
Query: 183 NLERLFLGCN-QFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQ 241
LE+L L N Q P L L L + L P L +L YL L N
Sbjct: 80 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA 139
Query: 242 LHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQI-PFAIGK 300
L + + L L L N+I + P+ + P A
Sbjct: 140 LQALPDDTFRDLGNLTHLFLHGNRISSV-PERAFRGLHSLDRLLLHQNRVAHVHPHAFRD 198
Query: 301 LFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHN 336
L L++L L N LS + LQ+L LN N
Sbjct: 199 LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 53/138 (38%)
Query: 79 PPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
P L L L+L L P L L+ LYL +N+L L NL
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 139 LYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTI 198
L+L N++S V + L SL L + N V P L L L+L N +
Sbjct: 158 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217
Query: 199 PREIGNLKNLTHLSIITN 216
+ L+ L +L + N
Sbjct: 218 TEALAPLRALQYLRLNDN 235
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 75/194 (38%), Gaps = 3/194 (1%)
Query: 77 SIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136
++P I + S +L+ N ++ + RNL +L+L +N L L L
Sbjct: 25 AVPVGIPAASQRIFLH--GNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 137 EELYLRSN-KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
E+L L N +L V P L L L + + P L L+ L+L N
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 196 GTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSA 255
+L NLTHL + N+++ L SL L L N++ P +
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 256 LAELDLSDNKIRGI 269
L L L N + +
Sbjct: 203 LMTLYLFANNLSAL 216
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 75/216 (34%), Gaps = 3/216 (1%)
Query: 123 HGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLT 182
G + +G + ++L N++S V ++L L + N + + L
Sbjct: 21 QGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80
Query: 183 NLERLFLGCN-QFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQ 241
LE+L L N Q P L L L + L P L +L YL L N
Sbjct: 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA 140
Query: 242 LHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQI-PFAIGK 300
L + + L L L N+I + P+ + P A
Sbjct: 141 LQALPDDTFRDLGNLTHLFLHGNRISSV-PERAFRGLHSLDRLLLHQNRVAHVHPHAFRD 199
Query: 301 LFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHN 336
L L++L L N LS + LQ+L LN N
Sbjct: 200 LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 14/165 (8%)
Query: 458 IGTGGYGSV----YKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIV 512
+G G +G V Y E + G+ VA+K L + + + E +L + H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHENIV 74
Query: 513 KLYGFCLHK--RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH 570
K G C + I E++ GSL L + I N +++ + + YL
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAVQICKGMDYLG- 131
Query: 571 DCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR 615
+ VHRD + + DFG + + D T++
Sbjct: 132 --SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 24/181 (13%)
Query: 447 NATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST 505
N + DF ++ +G G YG V A P G++VA+KK+ + F E ++L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 506 VRHRNIVKLYGFCLHKRC-----MFFIYEYME----RGSLFYVLRDDDEAIELNWTRRVN 556
+H NI+ ++ ++ I E M+ R +L DD + T R
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR-- 123
Query: 557 IVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA 616
A+ LH +++HRD + V DFG AR++ +++ +
Sbjct: 124 -------AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 617 G 617
G
Sbjct: 174 G 174
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 24/181 (13%)
Query: 447 NATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST 505
N + DF ++ +G G YG V A P G++VA+KK+ + F E ++L
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 506 VRHRNIVKLYGFCLHKRC-----MFFIYEYME----RGSLFYVLRDDDEAIELNWTRRVN 556
+H NI+ ++ ++ I E M+ R +L DD + T R
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR-- 123
Query: 557 IVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA 616
A+ LH +++HRD + V DFG AR++ +++ +
Sbjct: 124 -------AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 617 G 617
G
Sbjct: 174 G 174
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 11/163 (6%)
Query: 458 IGTGGYGSVYKAELPDGKV---VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKL 514
+G G +GSV + K VA+K L Q + A E EA+++ + + IV+L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 515 YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTP 574
G C + + E G L L E I + + ++ V+ + YL
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEK--- 455
Query: 575 SIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
+ VHR+ A ++DFG ++ L D S T R+
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 8/177 (4%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF+ +G G +G V A+ + + A+K L + VE E RVL+ +
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 510 NIVKLYGFCLHK-RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
+ C ++F+ EY+ G L Y ++ + + + V ++ L +L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISIGLFFL 136
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H I++RD +ADFG + +D GT YIAP+
Sbjct: 137 HKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPE 190
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 174 IPSTLF-RLTNLERLFLGCNQFNGTIPREIGN-LKNLTHLSIITNKLTGAIPSTLGHLTS 231
+P+ +F LT+L +L+LG N+ ++P + N L +LT+L++ TN+L LT
Sbjct: 43 LPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQ 101
Query: 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPD 272
L L L+ NQL S + L +L L N+++ +PD
Sbjct: 102 LKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPD 141
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 58/135 (42%), Gaps = 4/135 (2%)
Query: 115 LYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGN-LKSLIWLSVMYNTVGGP 173
L L NSL L +L +LYL NKL LP + N L SL +L++ N +
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTNQLQS- 90
Query: 174 IPSTLF-RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSL 232
+P+ +F +LT L+ L L NQ L L L + N+L LTSL
Sbjct: 91 LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150
Query: 233 LYLDLSFNQLHSFIP 247
Y+ L N P
Sbjct: 151 QYIWLHDNPWDCTCP 165
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 73/175 (41%), Gaps = 37/175 (21%)
Query: 221 AIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXX 280
++P+ + T+ YLDL N L S ++L +L L NK++ + P+
Sbjct: 21 SVPTGIPAQTT--YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSL-PNG------- 70
Query: 281 XXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGI-GNCTELQHLALNHNSLD 339
KL +L L+LS N+L S P G+ T+L+ LALN N L
Sbjct: 71 ----------------VFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQ 113
Query: 340 GTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMSFNNLEGEIPTYLRDNP 394
K+ L++L L N L ++P D F+ L +L DNP
Sbjct: 114 SLPDGVFDKLTQLKDLRLYQNQLK-SVP--------DGVFDRLTSLQYIWLHDNP 159
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 209 THLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRG 268
T+L + TN L LTSL L L N+L S ++L L+LS N+++
Sbjct: 31 TYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90
Query: 269 IIPDEXXXXXXXXXXXXXXXXXXGQIPFAI-GKLFNLVSLDLSKNKLSGSFPTGI-GNCT 326
+P+ +P + KL L L L +N+L S P G+ T
Sbjct: 91 -LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLT 148
Query: 327 ELQHLALNHNSLDGTIP 343
LQ++ L+ N D T P
Sbjct: 149 SLQYIWLHDNPWDCTCP 165
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
L++L L L N L L +L L LS N L L L+EL L +N
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTN 110
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREIG 203
+L + L L L + N + +P +F RLT+L+ ++L N ++ T P
Sbjct: 111 QLQSLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP---- 165
Query: 204 NLKNLTHLSIITNKLTGAIPSTLGHL 229
+ +LS NK +G + ++ G +
Sbjct: 166 ---GIRYLSEWINKHSGVVRNSAGSV 188
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
Query: 123 HGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RL 181
G T + G L L +N L + L SL L + N + +P+ +F +L
Sbjct: 17 QGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKL 75
Query: 182 TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQ 241
T+L L L NQ L L L++ TN+L LT L L L NQ
Sbjct: 76 TSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQ 135
Query: 242 LHSFIPLEIGNFSALAELDLSDNKIRGIIP 271
L S ++L + L DN P
Sbjct: 136 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 432 VTGGYDGKILYEDLINATEDFHIRYCI----GTGGYGSVYKAELPDGKVVALKKLHQSET 487
+TGG E ++NA+ F Y + G G + V + + K+ ++
Sbjct: 7 MTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK 66
Query: 488 EDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAI 547
+ + + EAR+ ++H NIV+L+ + + +++ + G LF + +
Sbjct: 67 LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS 126
Query: 548 ELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARL 604
E + + + ++ + +++Y H + IVHR+ + +ADFG A
Sbjct: 127 EADAS---HCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180
Query: 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
++ DS AGT GY++P+ P ++ +
Sbjct: 181 VN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPV 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 8/178 (4%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTV-R 507
+DF + IG G Y V L ++ A+K + + D ++ Q E V
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H +V L+ + +FF+ EY+ G L + ++ +L ++ AL+Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNY 125
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
LH I++RD + D+G + + GT YIAP+
Sbjct: 126 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 180
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY- 515
IG G + +VYK + V VA +L + S + F+ EA L ++H NIV+ Y
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE-RQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 516 ---GFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIEL--NWTRRVNIVKSVAHALSYLH 569
K+C+ + E G+L Y+ R I++ +W R++ L +LH
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH 146
Query: 570 HDCTPSIVHRD 580
TP I+HRD
Sbjct: 147 TR-TPPIIHRD 156
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 8/178 (4%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTV-R 507
+DF + IG G Y V L ++ A+K + + D ++ Q E V
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H +V L+ + +FF+ EY+ G L + ++ +L ++ AL+Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNY 121
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
LH I++RD + D+G + + GT YIAP+
Sbjct: 122 LHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
IGTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D VADFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIK---------VADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G+ VA+KKL + + F + E +L ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+ Y++ +E + + +V + L Y+H + +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGV 165
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLS 629
VHRD E + DFG AR H D + T T Y AP+ LS
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLAR--HAD-AEMTGYVVTRWYRAPEVILS 215
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 16/207 (7%)
Query: 437 DGKILYEDLINATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFV-- 493
D +L+ED+ E IG G + V + G+ A+K + ++ S +
Sbjct: 17 DDDVLFEDVYELCE------VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 494 ESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIELNWT 552
E + EA + ++H +IV+L ++ ++E+M+ L F +++ D +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDS 609
+ ++ + AL Y H + +I+HRD + + DFG A L
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
Query: 610 SNRTLRAGTYGYIAPDQRLSPPVNQKI 636
R GT ++AP+ P + +
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPV 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 8/178 (4%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTV-R 507
+DF + IG G Y V L ++ A+K + + D ++ Q E V
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H +V L+ + +FF+ EY+ G L + ++ +L ++ AL+Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNY 136
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
LH I++RD + D+G + + GT YIAP+
Sbjct: 137 LHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 21/197 (10%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA--ELPD----GKVVALKKLHQSETEDSAFVESFQNEARV 502
T+D+ + +G G + V + + P K++ KKL + + + EAR+
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ------KLEREARI 83
Query: 503 LSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVA 562
++H NIV+L+ + + +++ + G LF ++ + + + +
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIH 137
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTY 619
L ++H IVHRD + +ADFG A + + AGT
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTP 197
Query: 620 GYIAPDQRLSPPVNQKI 636
GY++P+ P + +
Sbjct: 198 GYLSPEVLRKDPYGKPV 214
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 34/127 (26%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
N+R ++ IP + + L+L+NN + P L NL++LY SNKL+
Sbjct: 21 NIRLASVPAGIPTD------KQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA--- 71
Query: 152 QEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPR-EIGNLKNLT 209
IP+ +F +LT L +L L N +IPR NLK+LT
Sbjct: 72 ----------------------IPTGVFDKLTQLTQLDLNDNHLK-SIPRGAFDNLKSLT 108
Query: 210 HLSIITN 216
H+ + N
Sbjct: 109 HIYLYNN 115
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 37/83 (44%)
Query: 182 TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQ 241
T+ +RL+L NQ P +L NL L +NKLT LT L LDL+ N
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
Query: 242 LHSFIPLEIGNFSALAELDLSDN 264
L S N +L + L +N
Sbjct: 93 LKSIPRGAFDNLKSLTHIYLYNN 115
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 309 LSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPM 368
L+ N+++ P + LQ L N N L K+ L LDL+ N+L +IP
Sbjct: 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK-SIPR 98
Query: 369 TLHPMFLDMSFNNLEGEIPTYLRDNP 394
+F+NL+ YL +NP
Sbjct: 99 G--------AFDNLKSLTHIYLYNNP 116
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 76 GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRN 135
S+P I + +LN N +T P L NL+ LY ++N L L
Sbjct: 25 ASVPAGIPTDKQRLWLNN--NQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQ 82
Query: 136 LEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168
L +L L N L + NLKSL + +YN
Sbjct: 83 LTQLDLNDNHLKSIPRGAFDNLKSLTHI-YLYN 114
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 493 VESFQNEARVLSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELN 550
V+ E VL + H+NIVKL+ R I E+ GSL+ VL + A L
Sbjct: 51 VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP 110
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEA----FVADFGTARLLH 606
+ + +++ V +++L + IVHR+ + + DFG AR L
Sbjct: 111 ESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Query: 607 VDSSNRTLRAGTYGYIAPD 625
D +L GT Y+ PD
Sbjct: 168 DDEQFVSL-YGTEEYLHPD 185
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKV----VALKKLHQSETEDSAFVESFQNEARVL 503
A ED + +G G +G VY+ + K VA+K + T D+ E F +EA ++
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 79
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAH 563
+ H +IVKL G + + + I E G L + L + ++++ V +
Sbjct: 80 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICK 136
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
A++YL + + VHRD + DFG +R +
Sbjct: 137 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 176
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 10/139 (7%)
Query: 493 VESFQNEARVLSTVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELN 550
V+ E VL + H+NIVKL+ R I E+ GSL+ VL + A L
Sbjct: 51 VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP 110
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEA----FVADFGTARLLH 606
+ + +++ V +++L + IVHR+ + + DFG AR L
Sbjct: 111 ESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
Query: 607 VDSSNRTLRAGTYGYIAPD 625
D L GT Y+ PD
Sbjct: 168 DDEQFVXL-YGTEEYLHPD 185
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 21/186 (11%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDG-----KVVALKKLHQSETEDSAFVESFQNEARV 502
T+++ + IG G + V + +L G K++ KKL + + + EAR+
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ------KLEREARI 56
Query: 503 LSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVA 562
++H NIV+L+ + + +++ + G LF ++ + + + +
Sbjct: 57 CRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQ 110
Query: 563 HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTY 619
L + H +VHRD + +ADFG A + D AGT
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 620 GYIAPD 625
GY++P+
Sbjct: 171 GYLSPE 176
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 449 TEDFHIRYCIGTGGYGSVYK-AELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
E ++I +G G +G V K + + A+K ++++ ++ + E +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLD 79
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE---LNWTRRVNIVKSVAHA 564
H NI+KL+ + + E G LF DE I+ + I+K V
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELF------DEIIKRKRFSEHDAARIIKQVFSG 133
Query: 565 LSYLHHDCTPSIVHRDXX---XXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGY 621
++Y+H +IVHRD + + DFG + ++ + R GT Y
Sbjct: 134 ITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD-RIGTAYY 189
Query: 622 IAPD 625
IAP+
Sbjct: 190 IAPE 193
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
I L ++K L+L +T P + L NL+VLYL N + +P + L NL+ L +
Sbjct: 103 IAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPRE 201
+ ++S + P + NL L L N + P L L NL + L NQ + P
Sbjct: 159 GNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-- 212
Query: 202 IGNLKNLTHLSIIT 215
L N ++L I+T
Sbjct: 213 ---LANTSNLFIVT 223
>pdb|1XEU|A Chain A, Crystal Structure Of Internalin C From Listeria
Monocytogenes
Length = 263
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 135 NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVG--GPIPSTLFRLTNLERLFLGCN 192
NL+EL+L N++S + P + +L L LSV N + IPS L RLFL N
Sbjct: 64 NLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIPSAC-----LSRLFLDNN 116
Query: 193 QFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQL 242
+ T + +LKNL LSI NKL + LG L+ L LDL N++
Sbjct: 117 ELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEI 162
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 64/160 (40%), Gaps = 28/160 (17%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEI-GSLRNLEELYLRS 143
L+ L +LNL +N L L L L L+NN L + P+ + L L++LYL
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREI 202
N+ LKSL PS +F RLT L+ L L NQ
Sbjct: 117 NQ-----------LKSL--------------PSGVFDRLTKLKELRLNTNQLQSIPAGAF 151
Query: 203 GNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQL 242
L NL LS+ TN+L L L + L NQ
Sbjct: 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 135 NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN-----------------TVG------ 171
+ E+L L+S L+ + L L WL++ YN T+G
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95
Query: 172 GPIPSTLF-RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLT 230
+P +F LT L++L+LG NQ L L L + TN+L LT
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155
Query: 231 SLLYLDLSFNQLHSFIPLEIGNFSALAEL 259
+L L LS NQL S +P G F L +L
Sbjct: 156 NLQTLSLSTNQLQS-VP--HGAFDRLGKL 181
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 60/165 (36%), Gaps = 26/165 (15%)
Query: 176 STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYL 235
+T LT L L L NQ +L L L + N+L HLT L L
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKL 112
Query: 236 DLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIP 295
L NQL S + L EL L+ N+++ I
Sbjct: 113 YLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG----------------------- 149
Query: 296 FAIGKLFNLVSLDLSKNKLSGSFPTG-IGNCTELQHLALNHNSLD 339
A KL NL +L LS N+L S P G +LQ + L N D
Sbjct: 150 -AFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFD 192
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
L+ L L L N L L L+ LYL N L L L+EL L +N
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
+L + L +L LS+ N + RL L+ + L NQF+
Sbjct: 142 QLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKV----VALKKLHQSETEDSAFVESFQNEARVL 503
A ED + +G G +G VY+ + K VA+K + T D+ E F +EA ++
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 67
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAH 563
+ H +IVKL G + + + I E G L + L + ++++ V +
Sbjct: 68 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICK 124
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
A++YL + + VHRD + DFG +R +
Sbjct: 125 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 135 NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN-----------------TVG------ 171
+ E+L L+S L+ + L L WL++ YN T+G
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95
Query: 172 GPIPSTLF-RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLT 230
+P +F LT L++L+LG NQ L L L + TN+L LT
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155
Query: 231 SLLYLDLSFNQLHSFIPLEIGNFSALAEL 259
+L L LS NQL S +P G F L +L
Sbjct: 156 NLQTLSLSTNQLQS-VP--HGAFDRLGKL 181
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 64/160 (40%), Gaps = 28/160 (17%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEI-GSLRNLEELYLRS 143
L+ L +LNL +N L L L L L+NN L + P+ + L L++LYL
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGG 116
Query: 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPREI 202
N+ LKSL PS +F RLT L+ L L NQ
Sbjct: 117 NQ-----------LKSL--------------PSGVFDRLTKLKELRLNTNQLQSIPAGAF 151
Query: 203 GNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQL 242
L NL LS+ TN+L L L + L NQ
Sbjct: 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 60/165 (36%), Gaps = 26/165 (15%)
Query: 176 STLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYL 235
+T LT L L L NQ +L L L + N+L HLT L L
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKL 112
Query: 236 DLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIP 295
L NQL S + L EL L+ N+++ I
Sbjct: 113 YLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG----------------------- 149
Query: 296 FAIGKLFNLVSLDLSKNKLSGSFPTG-IGNCTELQHLALNHNSLD 339
A KL NL +L LS N+L S P G +LQ + L N D
Sbjct: 150 -AFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFD 192
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
L+ L L L N L L L+ LYL N L L L+EL L +N
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
+L + L +L LS+ N + RL L+ + L NQF+
Sbjct: 142 QLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 450 EDFHIRY-CIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + + +G GG+G V+ ++ GK+ A KKL++ + + E ++L+ V
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
R IV L K + + M G + +++ D++ R + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+LH +I++RD ++D G A L + AGT G++AP+
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
Query: 81 QIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIE-IGSLRNLEEL 139
Q+ +L +L+YLNL +N G + LE+L ++ LH P +L L L
Sbjct: 370 QLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVL 429
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTV-GGPIPST--LFRLTNLERLFLGCNQFNG 196
L L + L+ L L++ N+ G I T L + +LE L L
Sbjct: 430 NLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLS 489
Query: 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSAL 256
+ L+N+ HL + N LTG L HL LYL+++ N + P + S
Sbjct: 490 IDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHLKG-LYLNMASNNIRIIPPHLLPALSQQ 548
Query: 257 AELDLSDNKI 266
+ ++LS N +
Sbjct: 549 SIINLSHNPL 558
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 448 ATEDFHIRYCIGTGGYGSVYKAELPDGK----VVALKKLHQSETEDSAFVESFQNEARVL 503
A ED + +G G +G VY+ + K VA+K + T D+ E F +EA ++
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIM 63
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAH 563
+ H +IVKL G + + + I E G L + L + ++++ V +
Sbjct: 64 KNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICK 120
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
A++YL + + VHRD + DFG +R +
Sbjct: 121 AMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 160
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 450 EDFHIRY-CIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + + +G GG+G V+ ++ GK+ A KKL++ + + E ++L+ V
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
R IV L K + + M G + +++ D++ R + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+LH +I++RD ++D G A L + AGT G++AP+
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 8/178 (4%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTV-R 507
+DF + IG G Y V L ++ A++ + + D ++ Q E V
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H +V L+ + +FF+ EY+ G L + ++ +L ++ AL+Y
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNY 168
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
LH I++RD + D+G + + GT YIAP+
Sbjct: 169 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 450 EDFHIRY-CIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + + +G GG+G V+ ++ GK+ A KKL++ + + E ++L+ V
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
R IV L K + + M G + +++ D++ R + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+LH +I++RD ++D G A L + AGT G++AP+
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 6/179 (3%)
Query: 450 EDFHIRY-CIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
ED+ + + +G GG+G V+ ++ GK+ A KKL++ + + E ++L+ V
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
R IV L K + + M G + +++ D++ R + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+LH +I++RD ++D G A L + AGT G++AP+
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPE 359
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 16/184 (8%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPV 632
P + D V DFG A+ V + TL GT Y+AP+ LS
Sbjct: 189 KPENLLIDQQGYIQ---------VTDFGFAK--RVKGATWTL-CGTPEYLAPEIILSKGY 236
Query: 633 NQKI 636
N+ +
Sbjct: 237 NKAV 240
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
E ++I +G G +G V K + + A+K ++++ ++ + E +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLD 79
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H NI+KL+ + + E G LF + E + R I+K V ++Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITY 136
Query: 568 LHHDCTPSIVHRDXX---XXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
+H +IVHRD + + DFG + ++ + R GT YIAP
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD-RIGTAYYIAP 192
Query: 625 D 625
+
Sbjct: 193 E 193
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
E ++I +G G +G V K + + A+K ++++ ++ + E +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKLD 79
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H NI+KL+ + + E G LF + E + R I+K V ++Y
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITY 136
Query: 568 LHHDCTPSIVHRDXX---XXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
+H +IVHRD + + DFG + ++ + R GT YIAP
Sbjct: 137 MHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD-RIGTAYYIAP 192
Query: 625 D 625
+
Sbjct: 193 E 193
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 62/158 (39%), Gaps = 16/158 (10%)
Query: 453 HIRYCIGTGGYGSVYKAELPDGKV----VALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
H IG G +G VY E D A+K L S + VE+F E ++ + H
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SRITEMQQVEAFLREGLLMRGLNH 81
Query: 509 RNIVKLYGFCLHKRCM-FFIYEYMERGSLFYVLRDDDEAIELNWTRR--VNIVKSVAHAL 565
N++ L G L + + YM G L +R + + N T + ++ VA +
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR----SPQRNPTVKDLISFGLQVARGM 137
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
YL VHRD VADFG AR
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 153
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPV 632
P + D V DFG A+ V TL GT Y+AP+ LS
Sbjct: 154 KPENLLIDQQGYIQ---------VTDFGFAK--RVKGRTWTL-CGTPEYLAPEIILSKGY 201
Query: 633 NQKI 636
N+ +
Sbjct: 202 NKAV 205
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 126/326 (38%), Gaps = 69/326 (21%)
Query: 82 IGSLSNLKYLNLRWNNLTG-TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELY 140
+ +L NL+ L L N+++ PK+ + RNL+VL NN++H + ++ SL L
Sbjct: 122 VHNLENLESLYLGSNHISSIKFPKDFPA-RNLKVLDFQNNAIHYISREDMRSLEQAINLS 180
Query: 141 LR--SNKLSGVLPQEIGNLKSLIW----------LSVMYNTVGGPIPSTLFRLT------ 182
L N + G+ E+G S I+ LSV++N + +L+ T
Sbjct: 181 LNFNGNNVKGI---ELGAFDSTIFQSLNFGGTPNLSVIFNGLQNSTTQSLWLGTFEDIDD 237
Query: 183 --------------NLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGH 228
++E L L ++F+ L L + L G +PS +
Sbjct: 238 EDISSAMLKGLCEMSVESLNLQEHRFSDISSTTFQCFTQLQELDLTATHLKG-LPSGMKG 296
Query: 229 LTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXX 288
L L L LS N + NF +L L IRG +
Sbjct: 297 LNLLKKLVLSVNHFDQLCQISAANFPSLTHL-----YIRGNVK----------------- 334
Query: 289 XXXGQIPFAIG---KLFNLVSLDLSKNKLSGS--FPTGIGNCTELQHLALNHNSLDGTIP 343
++ +G KL NL +LDLS N + S + N + LQ L L+HN G
Sbjct: 335 ----KLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQS 390
Query: 344 PEIGKILLLQNLDLSHNNLSGTIPMT 369
+ L+ LDL+ L P +
Sbjct: 391 QAFKECPQLELLDLAFTRLHINAPQS 416
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPV 632
P + D V DFG A+ V TL GT Y+AP+ LS
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAK--RVKGRTWTL-CGTPEYLAPEIILSKGY 216
Query: 633 NQKI 636
N+ +
Sbjct: 217 NKAV 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT AGT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLAGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 78/198 (39%), Gaps = 4/198 (2%)
Query: 77 SIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136
++P I + S +L+ N ++ S RNL +L+L +N+L G L L
Sbjct: 24 AVPTGIPASSQRIFLH--GNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLL 81
Query: 137 EELYLRSN-KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
E+L L N +L V P L L L + + P L L+ L+L N
Sbjct: 82 EQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ 141
Query: 196 GTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSA 255
+L NLTHL + N++ L SL L L N + P +
Sbjct: 142 ALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGR 201
Query: 256 LAELDLSDNKIRGIIPDE 273
L L L N + ++P E
Sbjct: 202 LMTLYLFANNL-SMLPAE 218
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 53/138 (38%)
Query: 79 PPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138
P L +L L+L L P L L+ LYL +N+L L NL
Sbjct: 97 PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTH 156
Query: 139 LYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTI 198
L+L N++ V L SL L + N V P L L L+L N +
Sbjct: 157 LFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLP 216
Query: 199 PREIGNLKNLTHLSIITN 216
+ L++L +L + N
Sbjct: 217 AEVLVPLRSLQYLRLNDN 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVESFQNEARVLS 504
+ +++ I++ IG G YG VY A + K VA+KK+++ ED + E +L+
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRM-FEDLIDCKRILREITILN 82
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI----VKS 560
++ I++L+ + + + F L+ VL D ++ + + + VK+
Sbjct: 83 RLKSDYIIRLHDLIIPEDLLKF-------DELYIVLEIADSDLKKLFKTPIFLTEQHVKT 135
Query: 561 VAHAL----SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ + L ++H I+HRD + DFG AR ++ D
Sbjct: 136 ILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 77 SIPPQIGSLSNLKYLNL---RWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSL 133
S+P +KYLNL R +++TG IPK +L L+V + N P
Sbjct: 401 SMPETCQWPEKMKYLNLSSTRIHSVTGCIPK---TLEILDVSNNNLNLFSLNLP------ 451
Query: 134 RNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCN 192
L+ELY+ NKL LP + L L+ L + N + +P +F RLT+L++++L N
Sbjct: 452 -QLKELYISRNKL-MTLP-DASLLPMLLVLKISRNQLKS-VPDGIFDRLTSLQKIWLHTN 507
Query: 193 QFNGTIPR 200
++ + PR
Sbjct: 508 PWDCSCPR 515
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Query: 306 SLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGT 365
SLDLS N+++ + + C LQ L L N ++ + L++LDLS+N LS
Sbjct: 30 SLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNL 89
Query: 366 IPMTLHPMFLDMSFNNLEGEIPTYLRDNPPNSFVGNKGLCGHVQVLAFTIFG 417
P+ ++F NL G P +G L H+ L G
Sbjct: 90 SSSWFKPLS-SLTFLNLLGN---------PYKTLGETSLFSHLTKLQILRVG 131
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 143
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 204 SKGYTKSI-DIWSVGCILAEMLSNRP 228
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 8/173 (4%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G+ VA+KKL + + F + E +L ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRP-FQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
+ Y++ ++ + + +V + L Y+H + +
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGV 147
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLS 629
VHRD E + DFG AR H D + T T Y AP+ LS
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLAR--HAD-AEMTGYVVTRWYRAPEVILS 197
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 39/186 (20%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRL- 78
Query: 516 GFCLHKRCMFFIYEYMERGSLFY-----------VLRDDDEAIELNWTRRVNIVK----S 560
+F Y E+ + Y V R T V VK
Sbjct: 79 --------RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 561 VAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF-VADFGTARLLHVDSSNRTLRAGTY 619
+ +L+Y+H + I HRD + DFG+A+ L N + Y
Sbjct: 131 LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 620 GYIAPD 625
Y AP+
Sbjct: 188 -YRAPE 192
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 471 -LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 452 FHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ IR+ IGTG YG V +A + + +VVA+KK+ + ED + E +L+ + H +
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDH 113
Query: 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI----VKSVAHAL- 565
+VK+ + K F L+ VL D + + V + +K++ + L
Sbjct: 114 VVKVLDIVIPKDVEKF-------DELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLL 166
Query: 566 ---SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL 605
Y+H + I+HRD V DFG AR +
Sbjct: 167 VGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFL 59
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDL--ASLILY 116
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKG 172
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 173 KLPIKWMAPE 182
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 632 VNQKI 636
N+ +
Sbjct: 216 YNKAV 220
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 143
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 204 SKGYTKSI-DIWSVGCILAEMLSNRP 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF C+G GG+G V++A+ D A+K++ E + E E + L+ + H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKLEHP 63
Query: 510 NIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWT----------RRV--NI 557
IV+ + L K + + L+ ++ + +W R V +I
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL--- 614
+A A+ +LH + ++HRD V DFG + D +T+
Sbjct: 124 FLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 615 ---------RAGTYGYIAPDQ 626
+ GT Y++P+Q
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQ 201
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 443 EDLINATEDFHIRY-------CIGTGGYGSVYKAELPDGKVVALK---KLHQSETEDSAF 492
E+L N ED I +G G +GSV + L +LK K + +
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 493 VESFQNEARVLSTVRHRNIVKLYGFCLHKRCM-----FFIYEYMERGSLFYVL---RDDD 544
+E F +EA + H N+++L G C+ I +M+ G L L R +
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139
Query: 545 EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARL 604
+ + + +A + YL + + +HRD VADFG ++
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 605 LHVDSSNRTLR 615
++ R R
Sbjct: 197 IYSGDYYRQGR 207
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 149
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 210 SKGYTKSI-DIWSVGCILAEMLSNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNRP 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 161
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 222 SKGYTKSI-DIWSVGCILAEMLSNRP 246
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNRP 226
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 471 -LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNRP 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
++++ ++ +G G + V + + K+ ++ + + + EAR+ ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIEL-NWTRRVNIVKSVAHALSY 567
NIV+L+ + + +++ + G LF +D A E + + ++ + +++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIAY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTYGYIAP 624
H + IVHR+ + +ADFG A ++ DS AGT GY++P
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 176
Query: 625 DQRLSPPVNQKI 636
+ P ++ +
Sbjct: 177 EVLKKDPYSKPV 188
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 20/191 (10%)
Query: 447 NATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESF 496
++T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 28 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKF 86
Query: 497 QNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVN 556
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 87 LQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLIL 143
Query: 557 IVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA 616
++ AL+YL + VHRD + DFG +R + DS+
Sbjct: 144 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 199
Query: 617 GTY--GYIAPD 625
G ++AP+
Sbjct: 200 GKLPIKWMAPE 210
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 143
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 204 SKGYTKSI-DIWSVGCILAEMLSNRP 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q ++F+N E +++ + H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMRKLDHCNIVRLR 79
Query: 516 GF 517
F
Sbjct: 80 YF 81
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 192
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q ++F+N E +++ + H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMRKLDHCNIVRLR 79
Query: 516 GF 517
F
Sbjct: 80 YF 81
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 69 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 189 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 235
Query: 632 VNQKI 636
N+ +
Sbjct: 236 YNKAV 240
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q ++F+N E +++ + H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG--------KAFKNRELQIMRKLDHCNIVRLR 79
Query: 516 GF 517
F
Sbjct: 80 YF 81
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 446 INATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLS 504
++ +++ I++ IG G YG VY A + K VA+KK+++ ED + E +L+
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILN 80
Query: 505 TVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI----VKS 560
++ I++LY + + F L+ VL D ++ + + + +K+
Sbjct: 81 RLKSDYIIRLYDLIIPDDLLKF-------DELYIVLEIADSDLKKLFKTPIFLTEEHIKT 133
Query: 561 VAHAL----SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
+ + L +++H I+HRD V DFG AR ++
Sbjct: 134 ILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLMIDQQGYIK---------VTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 145
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNRP 230
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 454 IRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
+R C G G Y A+ +KK S + E + E +L +RH NI+
Sbjct: 28 VRKC-RQKGTGKEYAAKF-------IKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
L+ +K + I E + G LF L + + E T+ +K + + YLH +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ---FLKQILDGVHYLH---S 133
Query: 574 PSIVHRD 580
I H D
Sbjct: 134 KRIAHFD 140
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFL 59
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILY 116
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKG 172
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 173 KLPIKWMAPE 182
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 139
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 200 SKGYTKSI-DIWSVGCILAEMLSNRP 224
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 139
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 200 SKGYTKSI-DIWSVGCILAEMLSNRP 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLMIDQQGYIQ---------VTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 146
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 207 SKGYTKSI-DIWSVGCILAEMLSNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 147
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 208 SKGYTKSI-DIWSVGCILAEMLSNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 138
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 199 SKGYTKSI-DIWSVGCILAEMLSNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 145
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNRP 230
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 454 IRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
+R C G G Y A+ +KK S + E + E +L +RH NI+
Sbjct: 21 VRKC-RQKGTGKEYAAKF-------IKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
L+ +K + I E + G LF L + + E T+ +K + + YLH +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ---FLKQILDGVHYLH---S 126
Query: 574 PSIVHRD 580
I H D
Sbjct: 127 KRIAHFD 133
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 632 VNQKI 636
N+ +
Sbjct: 216 YNKAV 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 161 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 632 VNQKI 636
N+ +
Sbjct: 208 YNKAV 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 20/191 (10%)
Query: 447 NATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESF 496
++T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKF 63
Query: 497 QNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVN 556
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 64 LQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLIL 120
Query: 557 IVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA 616
++ AL+YL + VHRD + DFG +R + DS+
Sbjct: 121 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASK 176
Query: 617 GTY--GYIAPD 625
G ++AP+
Sbjct: 177 GKLPIKWMAPE 187
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNRP 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 192
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLK----CQHLSNDHICYFLYQILRGLKYIH--- 145
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNRP 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLMIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLMIDQQGYIK---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 145
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNRP 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFL 59
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILY 116
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKG 172
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 173 KLPIKWMAPE 182
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + ++ ++ L+ +L+ L+ + + L Y+H
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 161
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 222 SKGYTKSI-DIWSVGCILAEMLSNRP 246
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 43 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 102
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 162
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 163 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 209
Query: 632 VNQKI 636
N+ +
Sbjct: 210 YNKAV 214
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 21/186 (11%)
Query: 454 IRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
+R C+ G Y A K++ KKL + + + EAR+ ++H NIV+
Sbjct: 38 VRRCVKVLA-GQEYAA-----KIINTKKLSARDHQ------KLEREARICRLLKHPNIVR 85
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
L+ + + I++ + G LF ++ + + + + L + H
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAVLHCHQ 139
Query: 574 PSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSP 630
+VHRD + +ADFG A + + AGT GY++P+
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 631 PVNQKI 636
P + +
Sbjct: 200 PYGKPV 205
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 160
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 161 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 211
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 161
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 162 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 212
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 146
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 147 H---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 197
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YG+V A + G VA+KKL++ + F + E R+L +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 517 FCLHKRCM------FFIYEYM--ERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
+ + + +M + G L + ++ I+ +V + L Y+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYI 144
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
H I+HRD E + DFG AR
Sbjct: 145 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
++++ ++ +G G + V + + K+ ++ + + + EAR+ ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIEL-NWTRRVNIVKSVAHALSY 567
NIV+L+ + + +++ + G LF +D A E + + ++ + +++Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIAY 120
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTYGYIAP 624
H + IVHR+ + +ADFG A ++ DS AGT GY++P
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 176
Query: 625 DQRLSPPVNQKI 636
+ P ++ +
Sbjct: 177 EVLKKDPYSKPV 188
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 86/192 (44%), Gaps = 12/192 (6%)
Query: 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
++++ ++ +G G + V + + K+ ++ + + + EAR+ ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIEL-NWTRRVNIVKSVAHALSY 567
NIV+L+ + + +++ + G LF +D A E + + ++ + +++Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELF----EDIVAREFYSEADASHCIQQILESIAY 119
Query: 568 LHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSSNRTLRAGTYGYIAP 624
H + IVHR+ + +ADFG A ++ DS AGT GY++P
Sbjct: 120 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSP 175
Query: 625 DQRLSPPVNQKI 636
+ P ++ +
Sbjct: 176 EVLKKDPYSKPV 187
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 137
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 138 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 188
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 141
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 202 SKGYTKSI-DIWSVGCILAEMLSNRP 226
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFL 59
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 60 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDL--ASLILY 116
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 117 AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKG 172
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 173 KLPIKWMAPE 182
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 516 GF 517
F
Sbjct: 80 YF 81
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 517 FCLHKRCM------FFIYEYM--ERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
R + + + M + ++ + D+ ++ ++ + L Y+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-------LIYQILRGLKYI 137
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 138 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 188
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 437 DGKILYEDLINATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFV-- 493
D +L+ED+ E IG G + V + G+ A+K + ++ S +
Sbjct: 19 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 72
Query: 494 ESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIELNWT 552
E + EA + ++H +IV+L ++ ++E+M+ L F +++ D +
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 132
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRD 580
+ ++ + AL Y H + +I+HRD
Sbjct: 133 VASHYMRQILEALRYCHDN---NIIHRD 157
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 80
Query: 516 GF 517
F
Sbjct: 81 YF 82
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 98
Query: 516 GF 517
F
Sbjct: 99 YF 100
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFL 62
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 63 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILY 119
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 120 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKG 175
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 176 KLPIKWMAPE 185
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 516 GF 517
F
Sbjct: 80 YF 81
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFL 61
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 62 QEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILY 118
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 119 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKG 174
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 175 KLPIKWMAPE 184
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 147
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 148 H---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 198
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 143
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 144 H---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 194
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 160
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 161 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 207
Query: 632 VNQKI 636
N+ +
Sbjct: 208 YNKAV 212
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 516 GF 517
F
Sbjct: 80 YF 81
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 91
Query: 516 GF 517
F
Sbjct: 92 YF 93
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 450 EDFHIRYCIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQNEARVLSTV 506
E + CIG G +G V++ P+ +A+ K ++ T DS E F EA +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV-REKFLQEALTMRQF 65
Query: 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS 566
H +IVKL G + + ++ I E G L L+ +++L + ++ AL+
Sbjct: 66 DHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDL--ASLILYAYQLSTALA 122
Query: 567 YLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY--GYIAP 624
YL + VHRD + DFG +R + DS+ G ++AP
Sbjct: 123 YLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAP 178
Query: 625 D 625
+
Sbjct: 179 E 179
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 92
Query: 516 GF 517
F
Sbjct: 93 YF 94
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 151
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 152 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 202
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 49/291 (16%)
Query: 432 VTGGYDGKILYEDLINATEDFHIRYCIGTGGYG-SVYKAELPDGKVVALKKLHQSETEDS 490
V G D I+++ ++ + + IG G +G + + ++VA+K + + E D
Sbjct: 6 VAGPMDLPIMHD-----SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID- 59
Query: 491 AFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVL----RDDDEA 546
E+ + E ++RH NIV+ L + + EY G LF + R ++
Sbjct: 60 ---ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 547 IELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH 606
+ + ++ V S AHA+ H D D +ADFG ++
Sbjct: 117 ARFFFQQLISGV-SYAHAMQVAHRDLKLENTLLDGSPAPRLK-------IADFGYSKASV 168
Query: 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL--------RSKPKS- 657
+ S ++ GT YIAP+ L + K + D+ T L +PK+
Sbjct: 169 LHSQPKSA-VGTPAYIAPEVLLKKEYDGK-VADVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
Query: 658 RPTMQRI----------------SQELEGKTPMKKGLKEISISEMRNQEMF 692
R T+ RI + L + + K ISI E+RN E F
Sbjct: 227 RKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 87
Query: 516 GF 517
F
Sbjct: 88 YF 89
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 91
Query: 516 GF 517
F
Sbjct: 92 YF 93
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGXVATRWYRAPE 192
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 69 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 188
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 189 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 235
Query: 632 VNQKI 636
N+ +
Sbjct: 236 YNKAV 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 83
Query: 516 GF 517
F
Sbjct: 84 YF 85
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 35 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 94
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 95 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 154
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 155 KPENLLIDEQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 201
Query: 632 VNQKI 636
N+ +
Sbjct: 202 YNKAV 206
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 219
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 88/231 (38%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 3 NAAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 123 YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 182
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 183 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 220
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 437 DGKILYEDLINATEDFHIRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFV-- 493
D +L+ED+ E IG G + V + G+ A+K + ++ S +
Sbjct: 17 DDDVLFEDVYELCE------VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST 70
Query: 494 ESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSL-FYVLRDDDEAIELNWT 552
E + EA + ++H +IV+L ++ ++E+M+ L F +++ D +
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 553 RRVNIVKSVAHALSYLHHDCTPSIVHRD 580
+ ++ + AL Y H + +I+HRD
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRD 155
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 153
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 154 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 204
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 152
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 153 H---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 203
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 84
Query: 516 GF 517
F
Sbjct: 85 YF 86
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 107
Query: 516 GF 517
F
Sbjct: 108 YF 109
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 161
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 162 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 212
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 164
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 165 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 215
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 113
Query: 516 GF 517
F
Sbjct: 114 YF 115
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 113
Query: 516 GF 517
F
Sbjct: 114 YF 115
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 160
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 161 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 211
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 152
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 153 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 203
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 632 VNQKI 636
N+ +
Sbjct: 216 YNKAV 220
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 74/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 146
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 147 H---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 197
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 153
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 154 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 204
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 153
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 154 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 204
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLXGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 146
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 147 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 197
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 115
Query: 516 GF 517
F
Sbjct: 116 YF 117
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 632 VNQKI 636
N+ +
Sbjct: 216 YNKAV 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 143
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 144 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 194
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D A T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPE 192
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ LS
Sbjct: 169 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKG 215
Query: 632 VNQKI 636
N+ +
Sbjct: 216 YNKAV 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 158
Query: 516 GF 517
F
Sbjct: 159 YF 160
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 139
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 140 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 190
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQN-EARVLSTVRHRNIVKLY 515
IG G +G VY+A+L D G++VA+KK+ Q + F+N E +++ + H NIV+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 117
Query: 516 GF 517
F
Sbjct: 118 YF 119
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D A T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPE 192
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 137
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 138 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 188
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 147
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 148 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 198
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 145
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T Y AP+ L+
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA+KK+ S E + + E ++L RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 146
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL---RAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T Y AP+ L+
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 207 SKGYTKSI-DIWSVGCILAEMLSNRP 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 143
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 144 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 194
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 192
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 79 PPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS--LRNL 136
PP S S+ +LN N T ++ + +L+ L+ L L N L + + + + +L
Sbjct: 349 PP---SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL 405
Query: 137 EELYLRSNKL-SGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRL--TNLERLFLGCNQ 193
E L + N L S + +S++ L++ N + G ++FR ++ L L N+
Sbjct: 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTG----SVFRCLPPKVKVLDLHNNR 461
Query: 194 FNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYL 235
+IP+++ +L+ L L++ +N+L LTSL Y+
Sbjct: 462 I-MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYI 502
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 11/126 (8%)
Query: 32 TCDYKGSITHIELVECSIKGELGSLNFSCFPXXXXXXXXXXXXSGSIPPQIGSLSNLKYL 91
TC + SI + L + G + F C P SIP + L L+ L
Sbjct: 423 TCAWAESILVLNLSSNMLTGSV----FRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQEL 478
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
N+ N L L +L+ ++L +N T P +R L E NK SGV+
Sbjct: 479 NVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWI---NKHSGVVR 531
Query: 152 QEIGNL 157
G++
Sbjct: 532 NSAGSV 537
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 85 LSNLKYLNLRWNNLTG-TIPKEIGSLRNLEVLYLSNNSLHGTT----PIEIGSLRNLEEL 139
+S+L+ L++ N+L + ++ VL LS+N L G+ P ++ L
Sbjct: 402 MSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLD----- 456
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTI 198
L +N++ + P+++ +L++L L+V N + +P +F RLT+L+ ++L N ++ T
Sbjct: 457 -LHNNRIMSI-PKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTC 513
Query: 199 PREIGNLKNLTHLSIITNKLTGAIPSTLG 227
P + +LS NK +G + ++ G
Sbjct: 514 P-------GIRYLSEWINKHSGVVRNSAG 535
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 80 PQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL 139
P I LS L+ L L N + ++LE L +S+N L + + SLR+L+
Sbjct: 70 PDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCCPMASLRHLD-- 127
Query: 140 YLRSNKLSGVLP--QEIGNLKSLIWL 163
L N VLP +E GNL L +L
Sbjct: 128 -LSFNDF-DVLPVCKEFGNLTKLTFL 151
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 147
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 148 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 198
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 143
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 144 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 194
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 137
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D A T Y AP+
Sbjct: 138 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPE 188
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 3 NAAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVK 62
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 63 HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 122
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 123 YAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIK 182
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT Y+AP+ LS N+ +
Sbjct: 183 ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAV 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 146
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 147 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 140
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 141 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 191
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 138
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 139 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 189
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 148
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 149 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 199
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A KV VA++K+ S E + + E ++L RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 517 F----CLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC 572
+ + +I + + L+ +L+ L+ + + L Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH--- 145
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR---TLRAGTYGYIAPDQRLS 629
+ +++HRD + + DFG AR+ D + T T Y AP+ L+
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 630 PPVNQKIIQDIILVSTTALACLRSKP 655
K I DI V L ++P
Sbjct: 206 SKGYTKSI-DIWSVGCILAEMLSNRP 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 161
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D A T Y AP+
Sbjct: 162 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVA-TRWYRAPE 212
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 138
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 139 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 189
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 96/241 (39%), Gaps = 66/241 (27%)
Query: 80 PQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS------- 132
PQ G SN +YLNL NN+ L +LEVL L NS+ IE+G+
Sbjct: 70 PQ-GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ---IEVGAFNGLASL 125
Query: 133 --------------------LRNLEELYLRS-----------NKLSGVLPQEIGNLKSLI 161
L L EL+LR+ N++ ++ ++G LK L
Sbjct: 126 NTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLE 185
Query: 162 WLS---------VMYNTVG----GPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNL 208
++S + Y +G +P+ L L LE L + N F P L +L
Sbjct: 186 YISEGAFEGLFNLKYLNLGMCNIKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSL 244
Query: 209 THLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHS-----FIPLEIGNFSALAELDLSD 263
L ++ ++++ + L SL+ L+L+ N L S F PL L EL L
Sbjct: 245 KKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY-----LVELHLHH 299
Query: 264 N 264
N
Sbjct: 300 N 300
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 93 LRWNNLTGTIPKEIGSL--RNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVL 150
+R+ NL+ T + + + + LEVL +SNN+L + L L+ELY+ NKL L
Sbjct: 438 MRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLF----LPRLQELYISRNKLK-TL 492
Query: 151 PQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPR 200
P + L+ + + N + +P +F RLT+L++++L N ++ + PR
Sbjct: 493 P-DASLFPVLLVMKIASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 541
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 141
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 142 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD-DEMTGYVATRWYRAPE 192
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 12/180 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVE-----SFQNEARVLSTVRHRNI 511
+G+G +G V+ A + K V +K + + + + ++E E +LS V H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 512 VKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD 571
+K+ + + FF + GS + D L+ I + + A+ YL
Sbjct: 92 IKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR-- 147
Query: 572 CTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP 631
I+HRD + DFG+A L T GT Y AP+ + P
Sbjct: 148 -LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF-CGTIEYCAPEVLMGNP 205
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF + IG GG+G VY D GK+ A+K L + + NE +LS V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 510 N----IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ + Y F + + FI + M G L Y L E ++ A +
Sbjct: 250 DCPFIVCMSYAFHTPDK-LSFILDLMNGGDLHYHLSQHGVFSE------ADMRFYAAEII 302
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
L H +V+RD ++D G A D S + A GT+GY+A
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMA 358
Query: 624 PD 625
P+
Sbjct: 359 PE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF + IG GG+G VY D GK+ A+K L + + NE +LS V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 510 N----IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ + Y F + + FI + M G L Y L E ++ A +
Sbjct: 250 DCPFIVCMSYAFHTPDK-LSFILDLMNGGDLHYHLSQHGVFSE------ADMRFYAAEII 302
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
L H +V+RD ++D G A D S + A GT+GY+A
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMA 358
Query: 624 PD 625
P+
Sbjct: 359 PE 360
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFL 439
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDL--ASLILY 496
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 497 AYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKG 552
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 553 KLPIKWMAPE 562
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 66/177 (37%), Gaps = 8/177 (4%)
Query: 451 DFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF+ +G G +G V +E ++ A+K L + VE E RVL+
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 510 NIVKLYGFCLHK-RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
+ C ++F+ EY+ G L Y ++ + V +A L +L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ---QVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ I++RD +ADFG + D GT YIAP+
Sbjct: 138 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 191
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITN-KLTGAIPSTLGHLTSL 232
+PS L L+ L++L L N+F N +LTHLSI N K L +L +L
Sbjct: 293 LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENL 352
Query: 233 LYLDLSFNQLHS--FIPLEIGNFSALAELDLSDNK 265
LDLS + + + L++ N S L L+LS N+
Sbjct: 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 81 QIGSLSNLKYLNLRWN---NLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137
Q+ +LS+L+ LNL +N +L KE L L++ + +P + +L L+
Sbjct: 371 QLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ--NLHLLK 428
Query: 138 ELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTV-GGPIPST--LFRLTNLERLFLGCNQF 194
L L + L Q L +L L++ N G I T L L LE L L
Sbjct: 429 VLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDL 488
Query: 195 NGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIP 247
+ +LK + H+ + N+LT + L HL +YL+L+ N + +P
Sbjct: 489 SSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG-IYLNLASNHISIILP 540
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 147
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D T T Y AP+
Sbjct: 148 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE-MTGYVATRWYRAPE 198
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 121/296 (40%), Gaps = 35/296 (11%)
Query: 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161
IP ++ S N+ VL L++N L P L L N +S + P+ L L
Sbjct: 19 IPDDLPS--NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLK 76
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
L++ +N + T TNL L L N + N KNL L + N L+
Sbjct: 77 VLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSST 136
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLE---IGNFSALAELDLSDNKIRGIIPDEXXXXX 278
T L +L L L+ N++ + E +GN S+L +LDLS N ++ P
Sbjct: 137 KLGTGVQLENLQELLLAKNKILALRSEELEFLGN-SSLRKLDLSSNPLKEFSPGCFQ--- 192
Query: 279 XXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKN-KLSGSFPTGIGNCTELQHLALNHNS 337
IGKLF L+ + N L+ + N T +Q+L+L +N
Sbjct: 193 ------------------TIGKLFALLLNNAQLNPHLTEKLCWELSN-TSIQNLSLANNQ 233
Query: 338 LDGTIPPEIG--KILLLQNLDLSHNNL----SGTIPMTLHPMFLDMSFNNLEGEIP 387
L T K L LDLS+NNL +G+ +L + +NN++ P
Sbjct: 234 LLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSP 289
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 112 LEVLYLSNNSLHGTTPIEIGSLR--NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNT 169
++ L L+NN L T+ L+ NL +L L N L V L SL +LS+ YN
Sbjct: 224 IQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNN 283
Query: 170 VGGPIPSTLFRLTN-----LERLFLGCNQFNGTIPR----EIGNLKNLTHLSIITNKLTG 220
+ P + + L+N L+R F + + P LK L +L++ N +
Sbjct: 284 IQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPS 343
Query: 221 AIPSTLGHLTSLLYLDLS--FNQLH-----SFIPLEIGNFSALAELDLSDNKIRGI 269
+T L SL YL LS F L +F+ L S L L+L+ N I I
Sbjct: 344 TKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLA---HSPLLTLNLTKNHISKI 396
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 113/301 (37%), Gaps = 7/301 (2%)
Query: 86 SNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNK 145
SN+ LNL N L P L +L NS+ P L L+ L L+ N+
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNE 84
Query: 146 LSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNL 205
LS + Q +L L +M N++ + NL +L L N + T L
Sbjct: 85 LSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 206 KNLTHLSIITNKLTGAIPSTLGHL--TSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSD 263
+NL L + NK+ L L +SL LDLS N L F P L L L++
Sbjct: 145 ENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNN 204
Query: 264 NKIRGIIPDE-----XXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSF 318
++ + ++ + F+ K NL LDLS N L
Sbjct: 205 AQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVG 264
Query: 319 PTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMS 378
L++L+L +N++ P + L+ L L ++ + HP D S
Sbjct: 265 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFS 324
Query: 379 F 379
F
Sbjct: 325 F 325
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 106/289 (36%), Gaps = 38/289 (13%)
Query: 18 IPHNTSD--HCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPXXXXXXXXXXXXS 75
+ +N +D H I D +IT + L ++ L NF+ + S
Sbjct: 4 VRYNVADCSHLKLTHIPDDLPSNITVLNLTHNQLR-RLPPTNFTRYSQLAILDAGFNSIS 62
Query: 76 GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRN 135
P L LK LNL+ N L+ + NL L L +NS+H + +N
Sbjct: 63 KLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKN 122
Query: 136 LEELYLRSNKLSG-----------------------VLPQE----IGNLKSLIWLSVMYN 168
L +L L N LS L E +GN SL L + N
Sbjct: 123 LIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGN-SSLRKLDLSSN 181
Query: 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPR----EIGNLKNLTHLSIITNKLTGAIPS 224
+ P + L L L Q N + E+ N ++ +LS+ N+L S
Sbjct: 182 PLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSN-TSIQNLSLANNQLLATSES 240
Query: 225 TLGHL--TSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIP 271
T L T+L LDLS+N LH +L L L N I+ + P
Sbjct: 241 TFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSP 289
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF + IG GG+G VY D GK+ A+K L + + NE +LS V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 510 N----IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ + Y F + + FI + M G L Y L E ++ A +
Sbjct: 250 DCPFIVCMSYAFHTPDK-LSFILDLMNGGDLHYHLSQHGVFSE------ADMRFYAAEII 302
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
L H +V+RD ++D G A D S + A GT+GY+A
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMA 358
Query: 624 PD 625
P+
Sbjct: 359 PE 360
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 451 DFHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF + IG GG+G VY D GK+ A+K L + + NE +LS V
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 510 N----IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHAL 565
+ + Y F + + FI + M G L Y L E ++ A +
Sbjct: 249 DCPFIVCMSYAFHTPDK-LSFILDLMNGGDLHYHLSQHGVFSE------ADMRFYAAEII 301
Query: 566 SYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRA--GTYGYIA 623
L H +V+RD ++D G A D S + A GT+GY+A
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMA 357
Query: 624 PD 625
P+
Sbjct: 358 PE 359
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 111/267 (41%), Gaps = 37/267 (13%)
Query: 124 GTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN--TVGGPIPSTLFRL 181
G T + G + L L SNKL + L L LS+ N + G + F
Sbjct: 18 GLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT 77
Query: 182 TNLERLFLGCNQFNG--TIPREIGNLKNLTHLSIITNKLTGAIP-STLGHLTSLLYLDLS 238
T+L+ L L FNG T+ L+ L HL + L S L +L+YLD+S
Sbjct: 78 TSLKYLDLS---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 134
Query: 239 FNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAI 298
H+ + G F+ L+ L++ K+ G E +P
Sbjct: 135 --HTHTRVAFN-GIFNGLSSLEVL--KMAGNSFQENF------------------LPDIF 171
Query: 299 GKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHN---SLDGTIPPEIGKILLLQNL 355
+L NL LDLS+ +L PT + + LQ L ++HN SLD T P + + LQ L
Sbjct: 172 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD-TFPYKC--LNSLQVL 228
Query: 356 DLSHNNLSGTIPMTLHPMFLDMSFNNL 382
D S N++ + L ++F NL
Sbjct: 229 DYSLNHIMTSKKQELQHFPSSLAFLNL 255
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 78 IPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137
+P L NL +L+L L P SL +L+VL +S+N+ L +L+
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226
Query: 138 ELYLRSNKLSGVLPQEIGNL-KSLIWLSVMYN 168
L N + QE+ + SL +L++ N
Sbjct: 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 258
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGT-TPIEIGSLRNLEELYLR 142
SL NL YL++ + L +LEVL ++ NS P LRNL L L
Sbjct: 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 143 SNKLSGVLPQEIGNLKSLIWLSVMYN 168
+L + P +L SL L++ +N
Sbjct: 184 QCQLEQLSPTAFNSLSSLQVLNMSHN 209
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 93 LRWNNLTGTIPKEIGSL--RNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVL 150
+R+ NL+ T + + + + LEVL +SNN+L + L L+ELY+ NKL L
Sbjct: 412 MRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLF----LPRLQELYISRNKLK-TL 466
Query: 151 PQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPR 200
P + L+ + + N + +P +F RLT+L++++L N ++ + PR
Sbjct: 467 P-DASLFPVLLVMKISRNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 515
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 79 PPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIE--IGSLRNL 136
P +I +L + N N LT T+ + G L LE L L N L + I +++L
Sbjct: 320 PSKISPFLHLDFSN---NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL 376
Query: 137 EELYLRSNKLSGVLPQEIGNL---KSLIWLSVMYNTVGGPIPSTLFRLT--NLERLFLGC 191
++L + N +S ++ G+ KSL+ L++ N + T+FR ++ L L
Sbjct: 377 QQLDISQNSVS--YDEKKGDCSWTKSLLSLNMSSNILTD----TIFRCLPPRIKVLDLHS 430
Query: 192 NQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSL 232
N+ +IP+++ L+ L L++ +N+L LTSL
Sbjct: 431 NKI-KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSL 470
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 136 LEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQF 194
++ L L SNK+ + P+++ L++L L+V N + +P +F RLT+L++++L N +
Sbjct: 423 IKVLDLHSNKIKSI-PKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPW 480
Query: 195 NGTIPR 200
+ + PR
Sbjct: 481 DCSCPR 486
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 41/189 (21%)
Query: 210 HLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLH--SFIPLEIGNFSALAELDLSDNKIR 267
HL N LT + GHLT L L L NQL S I +L +LD+S N +
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 387
Query: 268 GIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCT- 326
DE G + L+SL++S N L+ + I C
Sbjct: 388 Y---DE----------------KKGDCSWTKS----LLSLNMSSNILTDT----IFRCLP 420
Query: 327 -ELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMSFNNLEGE 385
++ L L+ N + +IP ++ K+ LQ L+++ N L ++P D F+ L
Sbjct: 421 PRIKVLDLHSNKI-KSIPKQVVKLEALQELNVASNQL-KSVP--------DGIFDRLTSL 470
Query: 386 IPTYLRDNP 394
+L NP
Sbjct: 471 QKIWLHTNP 479
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 307 LDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTI 366
L++S+N +S + + I + ++L+ L ++HN + L+ LDLSHN L +
Sbjct: 26 LNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL---V 82
Query: 367 PMTLHPMF----LDMSFNNLEG 384
++ HP LD+SFN +
Sbjct: 83 KISCHPTVNLKHLDLSFNAFDA 104
>pdb|2Y5Q|A Chain A, Listeria Monocytogenes Inlb (Internalin B) Residues 36-392
Length = 362
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 85
Query: 152 QEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERL-FLGCNQFNGTIPREIGNLKNLTH 210
+ NLK+L WL + N V + L G + NG + +L L
Sbjct: 86 --LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLV-----HLPQLES 138
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L + NK+T + L LT L L L NQ+ +PL + L L LS N I +
Sbjct: 139 LYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKNHISDL 193
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 454 IRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK 513
+R C G G Y A+ +KK + E + E +L +RH NI+
Sbjct: 42 VRKC-RQKGTGKEYAAKF-------IKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
L+ +K + I E + G LF L + + E T+ +K + + YLH +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ---FLKQILDGVHYLH---S 147
Query: 574 PSIVHRD 580
I H D
Sbjct: 148 KRIAHFD 154
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 448 ATEDFHIRY-------CIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVESFQ 497
+T D+ I+ CIG G +G V++ P+ +A+ K ++ T DS E F
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV-REKFL 439
Query: 498 NEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNI 557
EA + H +IVKL G + + ++ I E G L L+ +++L +
Sbjct: 440 QEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDL--ASLILY 496
Query: 558 VKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAG 617
++ AL+YL + VHRD + DFG +R + DS+ G
Sbjct: 497 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKG 552
Query: 618 TY--GYIAPD 625
++AP+
Sbjct: 553 KLPIKWMAPE 562
>pdb|2UZX|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZX|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZY|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2UZY|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2WQU|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|C Chain C, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|D Chain D, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|E Chain E, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|F Chain F, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQV|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
pdb|2WQV|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
Length = 289
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 28 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 83
Query: 152 QEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERL-FLGCNQFNGTIPREIGNLKNLTH 210
+ NLK+L WL + N V + L G + NG + +L L
Sbjct: 84 --LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLV-----HLPQLES 136
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L + NK+T + L LT L L L NQ+ +PL + L L LS N I +
Sbjct: 137 LYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKNHISDL 191
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 19/177 (10%)
Query: 458 IGTGGYGSVYKAELPDGKV-VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
IG G YG V A K VA+KK+ S E + + E ++L RH N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 517 FCLHK-----RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD 571
R ++ + + ME L+ +L+ +L+ + + L Y+H
Sbjct: 109 ILRASTLEAMRDVYIVQDLME-TDLYKLLKSQ----QLSNDHICYFLYQILRGLKYIH-- 161
Query: 572 CTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLL---HVDSSNRTLRAGTYGYIAPD 625
+ +++HRD + + DFG AR+ H + T T Y AP+
Sbjct: 162 -SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 66/177 (37%), Gaps = 8/177 (4%)
Query: 451 DFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF+ +G G +G V +E ++ A+K L + VE E RVL+
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 510 NIVKLYGFCLHK-RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYL 568
+ C ++F+ EY+ G L Y ++ + V +A L +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ---QVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
+ I++RD +ADFG + D GT YIAP+
Sbjct: 459 Q---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE 512
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP+ +S
Sbjct: 168 KPENLIIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPEIIISKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|2WQX|A Chain A, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
pdb|2WQX|B Chain B, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
Length = 289
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 130 IGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERL-F 188
I L N+ +L+L NKL+ + P + NLK+L WL + N V + L
Sbjct: 62 IQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEH 119
Query: 189 LGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPL 248
G + NG + +L L L + NK+T + L LT L L L NQ+ +PL
Sbjct: 120 NGISDINGLV-----HLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIRRIVPL 172
Query: 249 EIGNFSALAELDLSDNKIRGI 269
+ L L LS N I +
Sbjct: 173 --ARLTKLQNLYLSKNHISDL 191
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 164
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H D A T Y AP+
Sbjct: 165 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVA-TRWYRAPE 215
>pdb|1H6T|A Chain A, Internalin B: Crystal Structure Of Fused N-Terminal
Domains
Length = 291
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 30 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 85
Query: 152 QEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERL-FLGCNQFNGTIPREIGNLKNLTH 210
+ NLK+L WL + N V + L G + NG + +L L
Sbjct: 86 --LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLV-----HLPQLES 138
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L + NK+T + L LT L L L NQ+ +PL + L L LS N I +
Sbjct: 139 LYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL--AGLTKLQNLYLSKNHISDL 193
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 18/185 (9%)
Query: 457 CIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515
+GTG +G V + + G A+K L + + +E NE R+L V +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDC 572
++ + EY+ G +F LR E + + ++ + H+L ++ D
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 167
Query: 573 TPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPP 631
P + D V DFG A+ + RT GT Y+AP LS
Sbjct: 168 KPENLLIDQQGYIQ---------VTDFGFAKRV----KGRTWXLCGTPEYLAPAIILSKG 214
Query: 632 VNQKI 636
N+ +
Sbjct: 215 YNKAV 219
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSY 567
H NIVKL+ + F + E + G LF ++ E T I++ + A+S+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSE---TEASYIMRKLVSAVSH 121
Query: 568 LHHDCTPSIVHRDXXXXX---XXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAP 624
+H +VHRD E + DFG ARL D+ T Y AP
Sbjct: 122 MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 625 D 625
+
Sbjct: 179 E 179
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 23/187 (12%)
Query: 458 IGTGGYGSVYK-AELPDGKVVALKKLHQSETEDSAFVESFQNEARV-LSTVRHRNIVKLY 515
+G G +G V++ + G A+KK+ +E F+ E V + + IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G + E +E GSL +++ E R + + L YLH T
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLH---TRR 170
Query: 576 IVHRDXXXX-XXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY-----GYIAPDQRLS 629
I+H D A + DFG A L D ++L G Y ++AP+ +
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 630 PPVNQKI 636
P + K+
Sbjct: 231 KPCDAKV 237
>pdb|2WQW|A Chain A, Double-Disulfide Cross-Linked Crystal Dimer Of The
Listeria Monocytogenes Inlb Internalin Domain
pdb|2WQW|B Chain B, Double-Disulfide Cross-Linked Crystal Dimer Of The
Listeria Monocytogenes Inlb Internalin Domain
Length = 286
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 25 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 80
Query: 152 QEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERL-FLGCNQFNGTIPREIGNLKNLTH 210
+ NLK+L WL + N V + L G + NG + +L L
Sbjct: 81 --LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLV-----HLPQLES 133
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L + NK+T + L LT L L L NQ+ +PL + L L LS N I +
Sbjct: 134 LYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAC--LTKLQNLYLSKNHISDL 188
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 148
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H + T T Y AP+
Sbjct: 149 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT-ADEMTGYVATRWYRAPE 199
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141
+ L LK LT + +RNL L L N + + L NLE +
Sbjct: 119 LDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEEMPSHL-FDDLENLESIEF 177
Query: 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPR 200
SNKL + G + L L++ N + +P +F RLT+L++++L N ++ + PR
Sbjct: 178 GSNKLRQMPRGIFGKMPKLKQLNLASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 236
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 106 IGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSV 165
+G + +++ S+N T + L L+ + +L+ + + ++++L L +
Sbjct: 95 LGIVSPTTLIFESDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLEL 154
Query: 166 MYNTVGGPIPSTLFR-LTNLERLFLGCNQFNGTIPREI-GNLKNLTHLSIITNKLTGAIP 223
N +PS LF L NLE + G N+ +PR I G + L L++ +N+L
Sbjct: 155 RANI--EEMPSHLFDDLENLESIEFGSNKLR-QMPRGIFGKMPKLKQLNLASNQLKSVPD 211
Query: 224 STLGHLTSLLYLDLSFNQLHSFIP 247
LTSL + L N P
Sbjct: 212 GIFDRLTSLQKIWLHTNPWDCSCP 235
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 23/187 (12%)
Query: 458 IGTGGYGSVYK-AELPDGKVVALKKLHQSETEDSAFVESFQNEARV-LSTVRHRNIVKLY 515
+G G +G V++ + G A+KK+ +E F+ E V + + IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G + E +E GSL +++ E R + + L YLH T
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLH---TRR 186
Query: 576 IVHRDXXXX-XXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY-----GYIAPDQRLS 629
I+H D A + DFG A L D ++L G Y ++AP+ +
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 630 PPVNQKI 636
P + K+
Sbjct: 247 KPCDAKV 253
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 23/187 (12%)
Query: 458 IGTGGYGSVYK-AELPDGKVVALKKLHQSETEDSAFVESFQNEARV-LSTVRHRNIVKLY 515
+G G +G V++ + G A+KK+ +E F+ E V + + IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G + E +E GSL +++ E R + + L YLH T
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLH---TRR 184
Query: 576 IVHRDXXXX-XXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTY-----GYIAPDQRLS 629
I+H D A + DFG A L D ++L G Y ++AP+ +
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 630 PPVNQKI 636
P + K+
Sbjct: 245 KPCDAKV 251
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 148
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H + T T Y AP+
Sbjct: 149 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT-ADEMTGYVATRWYRAPE 199
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 32/192 (16%)
Query: 452 FHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ ++ +GTGG+G V + D G+ VA+K+ Q + + E + E +++ + H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPN 73
Query: 511 IVKLYGF--CLHKRCM----FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHA 564
+V L K EY E G L L + L ++ ++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH----------VDSSNR-T 613
L YLH + I+HRD E V G RL+H +D T
Sbjct: 134 LRYLHEN---RIIHRD---------LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181
Query: 614 LRAGTYGYIAPD 625
GT Y+AP+
Sbjct: 182 EFVGTLQYLAPE 193
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 23/177 (12%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G+G YGSV A + G VA+KKL + + + E R+L ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 517 FCLHKRCM-----FFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYL 568
R + ++ ++ L +++ D+ ++ ++ + L Y+
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYI 148
Query: 569 HHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPD 625
H + I+HRD E + DFG AR H + T T Y AP+
Sbjct: 149 H---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT-ADEMTGYVATRWYRAPE 199
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 32/192 (16%)
Query: 452 FHIRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN 510
+ ++ +GTGG+G V + D G+ VA+K+ Q + + E + E +++ + H N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPN 74
Query: 511 IVKLYGF--CLHKRCM----FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHA 564
+V L K EY E G L L + L ++ ++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 565 LSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLH----------VDSSNR-T 613
L YLH + I+HRD E V G RL+H +D T
Sbjct: 135 LRYLHEN---RIIHRD---------LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 182
Query: 614 LRAGTYGYIAPD 625
GT Y+AP+
Sbjct: 183 EFVGTLQYLAPE 194
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 447 NATEDFH-IRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEAR 501
EDF+ I +G+G + V K E G A K + + ++ S E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
+L V H N++ L+ ++ + I E + G LF L + E T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 562 AHALSYLHHDCTPSIVHRD 580
++YLH T I H D
Sbjct: 125 LDGVNYLH---TKKIAHFD 140
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 130 IGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERL-F 188
I L N+ +L+L NKL+ + P + NLK+L WL + N + + L
Sbjct: 61 IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEH 118
Query: 189 LGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPL 248
G + NG + +L L L + NK+T + L LT L L L NQ+ +PL
Sbjct: 119 NGISDINGLV-----HLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPL 171
Query: 249 EIGNFSALAELDLSDNKI 266
+ L L LS N I
Sbjct: 172 --AGLTKLQNLYLSKNHI 187
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Query: 306 SLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGT 365
SLDLS N+++ + + C LQ L L N ++ + L++LDLS+N LS
Sbjct: 56 SLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNL 115
Query: 366 IPMTLHPMFLDMSFNNLEGEIPTYLRDNPPNSFVGNKGLCGHVQVLAFTIFG 417
P+ ++F NL G P +G L H+ L G
Sbjct: 116 SSSWFKPLS-SLTFLNLLGN---------PYKTLGETSLFSHLTKLQILRVG 157
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 106/277 (38%), Gaps = 37/277 (13%)
Query: 101 TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSL 160
+IP G ++ L LSNN + + ++ NL+ L L SN ++ + +L SL
Sbjct: 45 SIPS--GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL 102
Query: 161 IWLSVMYNTVGG-------PIPSTLF------------------RLTNLERLFLG-CNQF 194
L + YN + P+ S F LT L+ L +G + F
Sbjct: 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTF 162
Query: 195 NGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFS 254
++ L L L I + L P +L + ++ +L L Q + + + S
Sbjct: 163 TKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTS 222
Query: 255 ALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXX---XXXXGQIPFAIGKLFNLVS----L 307
++ L+L D + E + F + KL N +S L
Sbjct: 223 SVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLEL 282
Query: 308 DLSKNKLSGSFPTGI-GNCTELQHLALNHNSLDGTIP 343
+ S+N+L S P GI T LQ + L+ N D + P
Sbjct: 283 EFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 447 NATEDFH-IRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEAR 501
EDF+ I +G+G + V K E G A K + + ++ S E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
+L V H N++ L+ ++ + I E + G LF L + E T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 562 AHALSYLHHDCTPSIVHRD 580
++YLH T I H D
Sbjct: 125 LDGVNYLH---TKKIAHFD 140
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 447 NATEDFH-IRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEAR 501
EDF+ I +G+G + V K E G A K + + ++ S E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
+L V H N++ L+ ++ + I E + G LF L + E T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 562 AHALSYLHHDCTPSIVHRD 580
++YLH T I H D
Sbjct: 125 LDGVNYLH---TKKIAHFD 140
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 447 NATEDFH-IRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEAR 501
EDF+ I +G+G + V K E G A K + + ++ S E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
+L V H N++ L+ ++ + I E + G LF L + E T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 562 AHALSYLHHDCTPSIVHRD 580
++YLH T I H D
Sbjct: 125 LDGVNYLH---TKKIAHFD 140
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 447 NATEDFH-IRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEAR 501
EDF+ I +G+G + V K E G A K + + ++ S E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
+L V H N++ L+ ++ + I E + G LF L + E T + +K +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 562 AHALSYLHHDCTPSIVHRD 580
++YLH T I H D
Sbjct: 125 LDGVNYLH---TKKIAHFD 140
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 452 FHIRYCIGTGGYGSVY---KAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
F + +G G +G V+ K PD G + A+K L ++ + V + + E +L+ V
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDD----DEAIELNWTRRVNIVKSVAH 563
H +VKL+ + ++ I +++ G LF L + +E ++ + +A
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 141
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYI 622
L +LH + I++RD + DFG ++ +D + GT Y+
Sbjct: 142 GLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEA-IDHEKKAYSFCGTVEYM 197
Query: 623 APD 625
AP+
Sbjct: 198 APE 200
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 452 FHIRYC-----IGTGGYG--SVYKAELPD---GKVVALKKLHQSETEDSAFVESFQNEAR 501
FH RY +G G +G S+Y + + G++VA+K L E +Q E
Sbjct: 6 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIE 63
Query: 502 VLSTVRHRNIVKLYGFCLHK--RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
+L T+ H +IVK G C + + + + EY+ GS LRD + + + +
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS----LRDYLPRHCVGLAQLLLFAQ 119
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ ++YLH +HR + DFG A+
Sbjct: 120 QICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
Query: 447 NATEDFH-IRYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEAR 501
EDF+ I +G+G + V K E G A K + + ++ S E + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 502 VLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV 561
+L V H NI+ L+ ++ + I E + G LF L + E T + +K +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQI 124
Query: 562 AHALSYLHHDCTPSIVHRD 580
++YLH T I H D
Sbjct: 125 LDGVNYLH---TKKIAHFD 140
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 452 FHIRYC-----IGTGGYG--SVYKAELPD---GKVVALKKLHQSETEDSAFVESFQNEAR 501
FH RY +G G +G S+Y + + G++VA+K L E +Q E
Sbjct: 5 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIE 62
Query: 502 VLSTVRHRNIVKLYGFCLHK--RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
+L T+ H +IVK G C + + + + EY+ GS LRD + + + +
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS----LRDYLPRHCVGLAQLLLFAQ 118
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ ++YLH +HR + DFG A+
Sbjct: 119 QICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLL 233
+P+ + T + L++ NQ P +L LT+L++ N+LT LT L
Sbjct: 34 VPAGIPTTTQVLHLYI--NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLT 91
Query: 234 YLDLSFNQLHSFIPLEI-GNFSALAELDLSDN 264
+L L NQL S IP+ + N +L + L +N
Sbjct: 92 HLALHINQLKS-IPMGVFDNLKSLTHIYLFNN 122
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 196 GTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNF-- 253
++P I + HL I N++T P LT L YL+L+ NQL + L +G F
Sbjct: 32 ASVPAGIPTTTQVLHLYI--NQITKLEPGVFDSLTQLTYLNLAVNQLTA---LPVGVFDK 86
Query: 254 -SALAELDLSDNKIRGI 269
+ L L L N+++ I
Sbjct: 87 LTKLTHLALHINQLKSI 103
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 128 IEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLER 186
+ G + L+L N+++ + P +L L +L++ N + +P +F +LT L
Sbjct: 34 VPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTA-LPVGVFDKLTKLTH 92
Query: 187 LFLGCNQFNGTIPREI-GNLKNLTHLSIITN 216
L L NQ +IP + NLK+LTH+ + N
Sbjct: 93 LALHINQLK-SIPMGVFDNLKSLTHIYLFNN 122
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 59/146 (40%), Gaps = 9/146 (6%)
Query: 494 ESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR 553
+ + EAR+ ++H NIV+L+ + + I++ + G LF ++ + +
Sbjct: 55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF------EDIVAREYYS 108
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAF---VADFGTARLLHVDSS 610
+ + L + H +VHR+ + +ADFG A + +
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 611 NRTLRAGTYGYIAPDQRLSPPVNQKI 636
AGT GY++P+ P + +
Sbjct: 169 AWFGFAGTPGYLSPEVLRKDPYGKPV 194
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 48/280 (17%)
Query: 445 LINATEDFHIRYCIGTGGYG-SVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVL 503
+++ ++ + + IG+G +G + + ++VA+K + + E D E+ + E
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINH 68
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVL----RDDDEAIELNWTRRVNIVK 559
++RH NIV+ L + + EY G LF + R ++ + + ++ V
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV- 127
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR--LLHVDSSNRTLRAG 617
S HA+ H D D + DFG ++ +LH S G
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLK-------ICDFGYSKSSVLH---SQPKSTVG 177
Query: 618 TYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL--------RSKPKS-RPTMQRI---- 664
T YIAP+ L + K + D+ T L +PK+ R T+ RI
Sbjct: 178 TPAYIAPEVLLKKEYDGK-VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ 236
Query: 665 ------------SQELEGKTPMKKGLKEISISEMRNQEMF 692
+ L + + K ISI E+RN E F
Sbjct: 237 YAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYYLH 131
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%)
Query: 106 IGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSV 165
G L +L L L N L G P +++EL L NK+ + + L L L++
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 166 MYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
N + +P + L +L L L N FN
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFN 139
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 298 IGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDL 357
G+L +LV L+L +N+L+G P + +Q L L N + + L+ L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 358 SHNNLSGTIP 367
N +S +P
Sbjct: 110 YDNQISCVMP 119
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261
G L +L L + N+LTG P+ + + L L N++ L L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 262 SDNKIRGIIP 271
DN+I ++P
Sbjct: 110 YDNQISCVMP 119
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 180 RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSF 239
RL +L +L L NQ G P ++ L + NK+ L L L+L
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 240 NQLHSFIPLEIGNFSALAELDLSDN 264
NQ+ +P + ++L L+L+ N
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 93 LRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRN---LEELYLRSNKLSGV 149
LR NN T+ + G + L L N S + T IE G+ + E+ L SN+L V
Sbjct: 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENV 96
Query: 150 LPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLT 209
+ L+SL L + N + + L+++ L L NQ P L +L+
Sbjct: 97 QHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLS 156
Query: 210 HLSIITN 216
L+++ N
Sbjct: 157 TLNLLAN 163
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 130
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 130
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 189
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 239
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 26/117 (22%)
Query: 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144
L++L LNL N L + +L LEVL LS N + L NL+EL L +N
Sbjct: 322 LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN 381
Query: 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFNGTIPR 200
+L V P +F RLT+L++++L N ++ + PR
Sbjct: 382 QLKSV-------------------------PDGIFDRLTSLQKIWLHTNPWDCSCPR 413
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLL 233
+ S T+LE+L L N+ N L +L L++ N L +L L
Sbjct: 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE 350
Query: 234 YLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPD 272
LDLS+N + + L EL L N+++ +PD
Sbjct: 351 VLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS-VPD 388
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 135 NLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFR-LTNLERLFLGCNQ 193
+LE+L L N+++ + L L+ L++ N +G I S +F L LE L L N
Sbjct: 300 DLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSYNH 358
Query: 194 FNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSL 232
+ L NL L++ TN+L LTSL
Sbjct: 359 IRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSL 397
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 53/138 (38%)
Query: 86 SNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNK 145
S +K +L + + + +LE L L+ N ++ L +L +L L N
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNF 334
Query: 146 LSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNL 205
L + + NL L L + YN + + L NL+ L L NQ L
Sbjct: 335 LGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRL 394
Query: 206 KNLTHLSIITNKLTGAIP 223
+L + + TN + P
Sbjct: 395 TSLQKIWLHTNPWDCSCP 412
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 21/164 (12%)
Query: 452 FHIRYC-----IGTGGYG--SVYKAELPD---GKVVALKKLHQSETEDSAFVESFQNEAR 501
FH RY +G G +G S+Y + + G++VA+K L ++ E
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR--SGWKQEID 85
Query: 502 VLSTVRHRNIVKLYGFC--LHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
+L T+ H +I+K G C + + EY+ GS LRD + + + +
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS----LRDYLPRHSIGLAQLLLFAQ 141
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ ++YLH +HRD + DFG A+
Sbjct: 142 QICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 183
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 233
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 77 SIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136
S+P G S+ L L N L L L L LS N + L L
Sbjct: 21 SVP--TGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78
Query: 137 EELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCNQFN 195
LYL NKL + L L L++ N + +P +F RLT+L++++L N ++
Sbjct: 79 TILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWD 137
Query: 196 GTIPR 200
+ PR
Sbjct: 138 CSCPR 142
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 2/125 (1%)
Query: 124 GTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLT 182
G T + G + L L SNKL + L L LS+ N + +P +F +LT
Sbjct: 18 GLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLT 76
Query: 183 NLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQL 242
L L+L N+ L L L++ TN+L LTSL + L N
Sbjct: 77 KLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136
Query: 243 HSFIP 247
P
Sbjct: 137 DCSCP 141
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 128 IEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLER 186
+ G + LYL N+++ + P L L L + N + +P+ +F +LT L +
Sbjct: 24 VPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQ 82
Query: 187 LFLGCNQFNGTIPR-EIGNLKNLTHLSIITN 216
L L NQ +IPR NLK+LTH+ ++ N
Sbjct: 83 LSLNDNQLK-SIPRGAFDNLKSLTHIWLLNN 112
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L + N++T P LT L LDL NQL + L +L L+DN+++ I
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSI 93
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%)
Query: 182 TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQ 241
T + L+L NQ P L LT L + N+LT LT L L L+ NQ
Sbjct: 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89
Query: 242 LHSFIPLEIGNFSALAELDLSDN 264
L S N +L + L +N
Sbjct: 90 LKSIPRGAFDNLKSLTHIWLLNN 112
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 76 GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRN 135
S+P I + + + YL N +T P L L L L NN L L
Sbjct: 22 ASVPTGIPTTTQVLYLYD--NQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 79
Query: 136 LEELYLRSNKLSGVLPQEIGNLKSL--IWL 163
L +L L N+L + NLKSL IWL
Sbjct: 80 LTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 20/187 (10%)
Query: 452 FHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETE--------DSAFVESFQNEARVL 503
+ ++ I +G YG+V +G VA+K++ + ++ DS + E R+L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 504 STVRHRNIVKLYGFCLH-----KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIV 558
+ H NI+ L +H ++ + E M R L V+ D I +I
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ-----HIQ 137
Query: 559 KSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ H L LH +VHRD + + DF AR D +N+T
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTH 196
Query: 619 YGYIAPD 625
Y AP+
Sbjct: 197 RWYRAPE 203
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 153
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 203
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 87/231 (37%), Gaps = 35/231 (15%)
Query: 428 NLKLVTGGYDGKILYEDLINATEDFHIRY-----------------CIGTGGYGSVYKAE 470
N G + + + E L A EDF ++ +GTG +G V +
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 471 LPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529
+ G A+K L + + +E NE R+L V +VKL ++ + E
Sbjct: 62 HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121
Query: 530 YMERGSLFYVLRDDDEAIELN---WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXX 586
Y+ G +F LR E + + ++ + H+L ++ D P + D
Sbjct: 122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQ 181
Query: 587 XXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYIAPDQRLSPPVNQKI 636
V DFG A+ + RT GT +AP+ LS N+ +
Sbjct: 182 ---------VTDFGFAKRV----KGRTWXLCGTPEALAPEIILSKGYNKAV 219
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 128 IEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLER 186
+ G + LYL N+++ + P L L L + N + +P+ +F +LT L +
Sbjct: 32 VPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQ 90
Query: 187 LFLGCNQFNGTIPR-EIGNLKNLTHLSIITN 216
L L NQ +IPR NLK+LTH+ ++ N
Sbjct: 91 LSLNDNQLK-SIPRGAFDNLKSLTHIWLLNN 120
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L + N++T P LT L LDL NQL + L +L L+DN+++ I
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSI 101
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%)
Query: 182 TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQ 241
T + L+L NQ P L LT L + N+LT LT L L L+ NQ
Sbjct: 38 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 97
Query: 242 LHSFIPLEIGNFSALAELDLSDN 264
L S N +L + L +N
Sbjct: 98 LKSIPRGAFDNLKSLTHIWLLNN 120
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 76 GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRN 135
S+P I + + + YL N +T P L L L L NN L L
Sbjct: 30 ASVPTGIPTTTQVLYLYD--NQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQ 87
Query: 136 LEELYLRSNKLSGVLPQEIGNLKSL--IWL 163
L +L L N+L + NLKSL IWL
Sbjct: 88 LTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 117
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 91 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 143
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 193
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 449 TEDFHIRYCIGTGGYGSVYK-AELPDGKVVALKK----LHQSETEDSAFVESFQNEARVL 503
T +FH IG+G +GSV+K + DG + A+K+ L S E +A E + + VL
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA--VL 67
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE-LNWTRRVNIVKSVA 562
+H ++V+ + M EY GSL + ++ + +++ V
Sbjct: 68 G--QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 563 HALSYLHHDCTPSIVHRD 580
L Y+H + S+VH D
Sbjct: 126 RGLRYIH---SMSLVHMD 140
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 93 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 145
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 195
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 8/170 (4%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+G V ++ GK+ A KKL + + NE ++L V R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
K + + M G L + + +A R V + L LH + I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRE---RI 307
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL-RAGTYGYIAPD 625
V+RD ++D G A +HV R GT GY+AP+
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPE 355
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 20/187 (10%)
Query: 452 FHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETE--------DSAFVESFQNEARVL 503
+ ++ I +G YG+V +G VA+K++ + ++ DS + E R+L
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 504 STVRHRNIVKLYGFCLH-----KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIV 558
+ H NI+ L +H ++ + E M R L V+ D I +I
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ-----HIQ 137
Query: 559 KSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLRAGT 618
+ H L LH +VHRD + + DF AR D +N+T
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTH 196
Query: 619 YGYIAPD 625
Y AP+
Sbjct: 197 RWYRAPE 203
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 8/170 (4%)
Query: 458 IGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516
+G GG+G V ++ GK+ A KKL + + NE ++L V R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576
K + + M G L + + +A R V + L LH + I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRE---RI 307
Query: 577 VHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTL-RAGTYGYIAPD 625
V+RD ++D G A +HV R GT GY+AP+
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPE 355
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 92 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 144
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 194
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 139
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 189
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 449 TEDFHIRYCIGTGGYGSVYK-AELPDGKVVALKK----LHQSETEDSAFVESFQNEARVL 503
T +FH IG+G +GSV+K + DG + A+K+ L S E +A E + + VL
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA--VL 65
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE-LNWTRRVNIVKSVA 562
+H ++V+ + M EY GSL + ++ + +++ V
Sbjct: 66 G--QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 563 HALSYLHHDCTPSIVHRD 580
L Y+H + S+VH D
Sbjct: 124 RGLRYIH---SMSLVHMD 138
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 137
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 187
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 68/177 (38%), Gaps = 31/177 (17%)
Query: 458 IGTGGYGSVYKA------ELPDGKVVALKKLHQSE--TEDSAFVESFQNEARVLSTV-RH 508
+G G +G V +A + VA+K L S TE E+ +E +VLS + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 86
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR--------------- 553
NIV L G C I EY G L LR ++ + T
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
++ VA +++L + + +HRD + DFG AR + DS+
Sbjct: 147 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 86 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 138
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 188
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 139
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPE 189
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 449 TEDFHIRYCIGTGGYGSVYK-AELPDGKVVALKK----LHQSETEDSAFVESFQNEARVL 503
T +FH IG+G +GSV+K + DG + A+K+ L S E +A E + + VL
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA--VL 63
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE-LNWTRRVNIVKSVA 562
+H ++V+ + M EY GSL + ++ + +++ V
Sbjct: 64 G--QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 563 HALSYLHHDCTPSIVHRD 580
L Y+H + S+VH D
Sbjct: 122 RGLRYIH---SMSLVHMD 136
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 31/177 (17%)
Query: 458 IGTGGYGSVYKA------ELPDGKVVALKKLHQSE--TEDSAFVESFQNEARVLSTV-RH 508
+G G +G V +A + VA+K L S TE E+ +E +VLS + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 102
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV------------- 555
NIV L G C I EY G L LR ++ + T
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 556 --NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ VA +++L + + +HRD + DFG AR + DS+
Sbjct: 163 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 128 IEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLER 186
+ G + LYL N+++ + P L L L + N + +P+ +F +LT L +
Sbjct: 24 VPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQ 82
Query: 187 LFLGCNQFNGTIPR-EIGNLKNLTHLSIITNKLTGAIPSTL 226
L L NQ +IPR NL++LTH+ ++ N A L
Sbjct: 83 LSLNDNQLK-SIPRGAFDNLRSLTHIWLLNNPWDCACSDIL 122
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 211 LSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269
L + N++T P LT L LDL NQL + L +L L+DN+++ I
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSI 93
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 449 TEDFHIRYCIGTGGYGSVYK-AELPDGKVVALKK----LHQSETEDSAFVESFQNEARVL 503
T +FH IG+G +GSV+K + DG + A+K+ L S E +A E + + VL
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA--VL 65
Query: 504 STVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIE-LNWTRRVNIVKSVA 562
+H ++V+ + M EY GSL + ++ + +++ V
Sbjct: 66 G--QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 563 HALSYLHHDCTPSIVHRD 580
L Y+H + S+VH D
Sbjct: 124 RGLRYIH---SMSLVHMD 138
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 10/63 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 139
Query: 578 HRD 580
HRD
Sbjct: 140 HRD 142
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 31/177 (17%)
Query: 458 IGTGGYGSVYKA------ELPDGKVVALKKLHQSE--TEDSAFVESFQNEARVLSTV-RH 508
+G G +G V +A + VA+K L S TE E+ +E +VLS + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 109
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV------------- 555
NIV L G C I EY G L LR ++ + T
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 556 --NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ VA +++L + + +HRD + DFG AR + DS+
Sbjct: 170 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 521 KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRR--VNIVKSVAHALSYLHHDCTPSIV 577
++C+ + E ++ G LF ++D D+A +T R I+KS+ A+ YLH + +I
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLH---SINIA 137
Query: 578 HRDXXXXXXXXXXXXEAFV---ADFGTARLLHVDSSNRTLRAGTYG--YIAPD 625
HRD + DFG A+ +S+ +L Y Y+AP+
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPE 187
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 47/287 (16%)
Query: 78 IPPQI-GSLSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGTTPIEIGSLRN 135
+PP + ++ L L L N+L+ ++P+ I + L L +SNN+L + +
Sbjct: 114 LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172
Query: 136 LEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
L+ L L SN+L+ V ++ + SL +V YN + STL +E L N N
Sbjct: 173 LQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSIN 224
Query: 196 GTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSA 255
+ R N++ LT L + N LT + L + L+ +DLS+N+L +
Sbjct: 225 --VVRGPVNVE-LTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 279
Query: 256 LAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQ-IPFAIGKLFNLVSLDLSKNKL 314
L L +S+N++ + GQ IP L LDLS N L
Sbjct: 280 LERLYISNNRLVAL-------------------NLYGQPIP-------TLKVLDLSHNHL 313
Query: 315 SGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNN 361
L++L L+HNS+ + ++ L+NL LSHN+
Sbjct: 314 LH-VERNQPQFDRLENLYLDHNSI---VTLKLSTHHTLKNLTLSHND 356
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 7/116 (6%)
Query: 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVK 513
+G+G + V K E G A K + + T+ S E + E +L ++H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 514 LYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH 569
L+ +K + I E + G LF L + + E T +K + + + YLH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYLH 131
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLDTLLLQENSLY-TIP 188
Query: 200 R 200
+
Sbjct: 189 K 189
>pdb|1D0B|A Chain A, Internalin B Leucine Rich Repeat Domain
Length = 213
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 25 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 80
Query: 152 QEIGNLKSLIWLSVMYNTV--------------------GGPIPSTLFRLTNLERLFLGC 191
+ NLK+L WL + N + G + L L LE L+LG
Sbjct: 81 --LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGN 138
Query: 192 NQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245
N+ T + L L LS+ N+++ +P L LT L L LS N +
Sbjct: 139 NKI--TDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 188
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIP 188
Query: 200 R 200
+
Sbjct: 189 K 189
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 31/177 (17%)
Query: 458 IGTGGYGSVYKA------ELPDGKVVALKKLHQSE--TEDSAFVESFQNEARVLSTV-RH 508
+G G +G V +A + VA+K L S TE E+ +E +VLS + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 109
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV------------- 555
NIV L G C I EY G L LR ++ + T
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 556 --NIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ VA +++L + + +HRD + DFG AR + DS+
Sbjct: 170 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
>pdb|1OTN|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 48 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 103
Query: 152 QEIGNLKSLIWLSVMYNTV--------------------GGPIPSTLFRLTNLERLFLGC 191
+ NLK+L WL + N + G + L L LE L+LG
Sbjct: 104 --LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGN 161
Query: 192 NQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245
N+ T + L L LS+ N+++ +P L LT L L LS N +
Sbjct: 162 NKI--TDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 211
>pdb|1OTO|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 48 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 103
Query: 152 QEIGNLKSLIWLSVMYNTV--------------------GGPIPSTLFRLTNLERLFLGC 191
+ NLK+L WL + N + G + L L LE L+LG
Sbjct: 104 --LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGN 161
Query: 192 NQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245
N+ T + L L LS+ N+++ +P L LT L L LS N +
Sbjct: 162 NKI--TDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 211
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188
Query: 200 R 200
+
Sbjct: 189 K 189
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 26/264 (9%)
Query: 206 KNLTHLSIITNKLT-GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDN 264
K +HL + +K A+P L T++L+L S N L++F + ++ L +L+L
Sbjct: 8 KVASHLEVNCDKRNLTALPPDLPKDTTILHL--SENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 265 KIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTG-IG 323
++ + D +P L L LD+S N+L+ S P G +
Sbjct: 66 ELTKLQVDGTLPVLGTLDLSHNQLQ---SLPLLGQTLPALTVLDVSFNRLT-SLPLGALR 121
Query: 324 NCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMSFNNLE 383
ELQ L L N L P + L+ L L++NNL+ +P L N LE
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL--------LNGLE 172
Query: 384 GEIPTYLRDNP----PNSFVGN-----KGLCGHVQVLAFTIFGFILLLKGKSENLKLVTG 434
L++N P F G+ L G+ + I F L+ +EN+ +
Sbjct: 173 NLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAENVYVWKQ 232
Query: 435 GYDGKILYEDLINATEDFHIRYCI 458
G D K + ++ + D ++ +
Sbjct: 233 GVDVKAMTSNVASVQCDNSDKFPV 256
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIP 188
Query: 200 R 200
+
Sbjct: 189 K 189
>pdb|1OTM|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 92 NLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151
NL+ ++T + + L +++ + +N+ + I+ L N+ +L+L NKL+ + P
Sbjct: 48 NLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQGIQY--LPNVTKLFLNGNKLTDIKP 103
Query: 152 QEIGNLKSLIWLSVMYNTV--------------------GGPIPSTLFRLTNLERLFLGC 191
+ NLK+L WL + N + G + L L LE L+LG
Sbjct: 104 --LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGN 161
Query: 192 NQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245
N+ T + L L LS+ N+++ +P L LT L L LS N +
Sbjct: 162 NKI--TDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 211
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188
Query: 200 R 200
+
Sbjct: 189 K 189
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 38/270 (14%)
Query: 206 KNLTHLSIITNK--LTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAEL---- 259
K +HL + +K LT A+P L T++L+L S N L++F + ++ L +L
Sbjct: 8 KVASHLEVNCDKRDLT-ALPPDLPKDTTILHL--SENLLYTFSLATLMPYTRLTQLNLDR 64
Query: 260 -DLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSF 318
+L+ ++ G +P +P L L LD+S N+L+ S
Sbjct: 65 CELTKLQVDGTLP--------VLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SL 115
Query: 319 PTG-IGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDM 377
P G + ELQ L L N L P + L+ L L++NNL+ +P L
Sbjct: 116 PLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL------- 167
Query: 378 SFNNLEGEIPTYLRDNP----PNSFVGN-----KGLCGHVQVLAFTIFGFILLLKGKSEN 428
N LE L++N P F G+ L G+ + I F L+ +EN
Sbjct: 168 -LNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAEN 226
Query: 429 LKLVTGGYDGKILYEDLINATEDFHIRYCI 458
+ + G D K + ++ + D ++ +
Sbjct: 227 VYVWKQGVDVKAMTSNVASVQCDNSDKFPV 256
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188
Query: 200 R 200
+
Sbjct: 189 K 189
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 26/264 (9%)
Query: 206 KNLTHLSIITNKLT-GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDN 264
K +HL + +K A+P L T++L+L S N L++F + ++ L +L+L
Sbjct: 8 KVASHLEVNCDKRNLTALPPDLPKDTTILHL--SENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 265 KIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTG-IG 323
++ + D +P L L LD+S N+L+ S P G +
Sbjct: 66 ELTKLQVDGTLPVLGTLDLSHNQLQ---SLPLLGQTLPALTVLDVSFNRLT-SLPLGALR 121
Query: 324 NCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMSFNNLE 383
ELQ L L N L P + L+ L L++NNL+ +P L N LE
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL--------LNGLE 172
Query: 384 GEIPTYLRDNP----PNSFVGN-----KGLCGHVQVLAFTIFGFILLLKGKSENLKLVTG 434
L++N P F G+ L G+ + I F L+ +EN+ +
Sbjct: 173 NLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAENVYVWKQ 232
Query: 435 GYDGKILYEDLINATEDFHIRYCI 458
G D K + ++ + D ++ +
Sbjct: 233 GVDVKAMTSNVASVQCDNSDKFPV 256
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 7/129 (5%)
Query: 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRS 143
+L +LK LNL +N + + L NL+VL LS N L L + + L+
Sbjct: 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347
Query: 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIG 203
N ++ + Q L+ L L + N + +T+ + ++ +FL N+ T+P+ I
Sbjct: 348 NHIAIIQDQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIFLSGNKL-VTLPK-IN 400
Query: 204 NLKNLTHLS 212
NL HLS
Sbjct: 401 LTANLIHLS 409
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 188
Query: 200 R 200
+
Sbjct: 189 K 189
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 26/264 (9%)
Query: 206 KNLTHLSIITNKLT-GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDN 264
K +HL + +K A+P L T++L+L S N L++F + ++ L +L+L
Sbjct: 8 KVASHLEVNCDKRNLTALPPDLPKDTTILHL--SENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 265 KIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTG-IG 323
++ + D +P L L LD+S N+L+ S P G +
Sbjct: 66 ELTKLQVDGTLPVLGTLDLSHNQLQ---SLPLLGQTLPALTVLDVSFNRLT-SLPLGALR 121
Query: 324 NCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMSFNNLE 383
ELQ L L N L P + L+ L L++NNL+ +P L N LE
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGL--------LNGLE 172
Query: 384 GEIPTYLRDNP----PNSFVGN-----KGLCGHVQVLAFTIFGFILLLKGKSENLKLVTG 434
L++N P F G+ L G+ + I F L+ +EN+ +
Sbjct: 173 NLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWLQDNAENVYVWKQ 232
Query: 435 GYDGKILYEDLINATEDFHIRYCI 458
G D K + ++ + D ++ +
Sbjct: 233 GVDVKAMTSNVASVQCDNSDKFPV 256
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 45/286 (15%)
Query: 78 IPPQI-GSLSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGTTPIEIGSLRN 135
+PP + ++ L L L N+L+ ++P+ I + L L +SNN+L + +
Sbjct: 108 LPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 166
Query: 136 LEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195
L+ L L SN+L+ V ++ + SL +V YN + STL +E L N N
Sbjct: 167 LQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL-----STLAIPIAVEELDASHNSIN 218
Query: 196 GTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSA 255
+ R N++ LT L + N LT + L + L+ +DLS+N+L +
Sbjct: 219 --VVRGPVNVE-LTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 273
Query: 256 LAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLS 315
L L +S+N++ + GQ P K+ LDLS N L
Sbjct: 274 LERLYISNNRLVAL-------------------NLYGQ-PIPTLKV-----LDLSHNHLL 308
Query: 316 GSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNN 361
L++L L+HNS+ + ++ L+NL LSHN+
Sbjct: 309 H-VERNQPQFDRLENLYLDHNSI---VTLKLSTHHTLKNLTLSHND 350
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 68/177 (38%), Gaps = 31/177 (17%)
Query: 458 IGTGGYGSVYKA------ELPDGKVVALKKLHQSE--TEDSAFVESFQNEARVLSTV-RH 508
+G G +G V +A + VA+K L S TE E+ +E +VLS + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER----EALMSELKVLSYLGNH 104
Query: 509 RNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTR--------------- 553
NIV L G C I EY G L LR ++ + T
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 554 RVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
++ VA +++L + + +HRD + DFG AR + DS+
Sbjct: 165 LLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 75 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 130
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP 199
YL+ N+L + P + L LS+ N + L L NL+ L L N TIP
Sbjct: 131 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIP 189
Query: 200 R 200
+
Sbjct: 190 K 190
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 452 FHIRYC-----IGTGGYG--SVYKAELPD---GKVVALKKLHQSETEDSAFVESFQNEAR 501
FH RY +G G +G S+Y + + G++VA+K L ++ E
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEID 68
Query: 502 VLSTVRHRNIVKLYGFCLHK--RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
+L T+ H +I+K G C + + + + EY+ GS LRD + + + +
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS----LRDYLPRHSIGLAQLLLFAQ 124
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ ++YLH + +HR+ + DFG A+
Sbjct: 125 QICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 452 FHIRYCIGTGGYGSVYKAELPDG----KVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
F + +G G +G V+ + G ++ A+K L ++ + V + + E +L V
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDD----DEAIELNWTRRVNIVKSVAH 563
H IVKL+ + ++ I +++ G LF L + +E ++ + +A
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 137
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYI 622
AL +LH + I++RD + DFG ++ +D + GT Y+
Sbjct: 138 ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 623 APD 625
AP+
Sbjct: 194 APE 196
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 452 FHIRYCIGTGGYGSVYKAELPDG----KVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
F + +G G +G V+ + G ++ A+K L ++ + V + + E +L V
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 85
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDD----DEAIELNWTRRVNIVKSVAH 563
H IVKL+ + ++ I +++ G LF L + +E ++ + +A
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 138
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYI 622
AL +LH + I++RD + DFG ++ +D + GT Y+
Sbjct: 139 ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 194
Query: 623 APD 625
AP+
Sbjct: 195 APE 197
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 51/198 (25%)
Query: 454 IRYC----IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-- 507
I +C +G G G++ + D + VA+K++ E F R + +R
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---------LPECFSFADREVQLLRES 74
Query: 508 --HRNIVKLYGFCLHKR----------CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRV 555
H N+++ FC K C + EY+E+ ++ +
Sbjct: 75 DEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHL-----------GLEPI 121
Query: 556 NIVKSVAHALSYLHHDCTPSIVHRDXX-----XXXXXXXXXXEAFVADFGTARLLHVDS- 609
+++ L++LH + +IVHRD +A ++DFG + L V
Sbjct: 122 TLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
Query: 610 --SNRTLRAGTYGYIAPD 625
S R+ GT G+IAP+
Sbjct: 179 SFSRRSGVPGTEGWIAPE 196
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 452 FHIRYCIGTGGYGSVYKA--ELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
+ ++ CI GG G +Y A +G+ V LK L S D+ E + L+ V H
Sbjct: 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHP 139
Query: 510 NIVKLYGFCLHKR-----CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHA 564
+IV+++ F H + + EY+ SL + +L + + + A
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAIAYLLEILPA 194
Query: 565 LSYLH 569
LSYLH
Sbjct: 195 LSYLH 199
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFR-LTNLERLFLGCNQFNGTI 198
YL+ N+L + P + L LS+ N + +P+ L L NL+ L L N TI
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLTE-LPAGLLNGLENLDTLLLQENSLY-TI 187
Query: 199 PR 200
P+
Sbjct: 188 PK 189
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 83 GSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR---NLEEL 139
G+L L L+L N L ++P +L L VL +S N L T + +G+LR L+EL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL---TSLPLGALRGLGELQEL 129
Query: 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFR-LTNLERLFLGCNQFNGTI 198
YL+ N+L + P + L LS+ N + +P+ L L NL+ L L N TI
Sbjct: 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNQLTE-LPAGLLNGLENLDTLLLQENSLY-TI 187
Query: 199 PR 200
P+
Sbjct: 188 PK 189
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 452 FHIRYC-----IGTGGYG--SVYKAELPD---GKVVALKKLHQSETEDSAFVESFQNEAR 501
FH RY +G G +G S+Y + + G++VA+K L ++ E
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEID 68
Query: 502 VLSTVRHRNIVKLYGFCLHK--RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
+L T+ H +I+K G C + + + + EY+ GS LRD + + + +
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS----LRDYLPRHSIGLAQLLLFAQ 124
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
+ ++YLH +HR+ + DFG A+
Sbjct: 125 QICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 73/187 (39%), Gaps = 23/187 (12%)
Query: 458 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEA-RVLSTVRHRNIVKLY 515
+G G +G V++ E G A+KK+ +E F+ E + + IV LY
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575
G + E +E GSL ++++ E R + + L YLH +
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQALEGLEYLH---SRR 205
Query: 576 IVHRDXXXXXXX-XXXXXEAFVADFGTARLLHVDSSNRTLRAGTY-----GYIAPDQRLS 629
I+H D A + DFG A L D ++L G Y ++AP+ L
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 630 PPVNQKI 636
+ K+
Sbjct: 266 RSCDAKV 272
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 38/187 (20%)
Query: 216 NKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXX 275
+K+ IPS+ ++ DLSFN L NFS L LDLS +I I D+
Sbjct: 19 SKVPDDIPSSTKNI------DLSFNPLKILKSYSFSNFSELQWLDLSRCEIET-IEDK-- 69
Query: 276 XXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNH 335
A L +L +L L+ N + P T L++L
Sbjct: 70 ---------------------AWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVE 108
Query: 336 NSLDGTIPPEIGKILLLQNLDLSHNNL-SGTIPMTLHPM----FLDMSFNNLEGEIPT-- 388
L IG+++ L+ L+++HN + S +P + +D+S+N ++
Sbjct: 109 TKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 168
Query: 389 -YLRDNP 394
+LR+NP
Sbjct: 169 QFLRENP 175
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 170 VGGPI----PSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL-TGAIPS 224
G PI P + LT+LE L + IG L L L++ N + + +P+
Sbjct: 83 TGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPA 142
Query: 225 TLGHLTSLLYLDLSFNQLHS 244
+LT+L+++DLS+N + +
Sbjct: 143 YFSNLTNLVHVDLSYNYIQT 162
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 452 FHIRYCIGTGGYGSVYKAELPDG----KVVALKKLHQSETEDSAFVESFQNEARVLSTVR 507
F + +G G +G V+ + G ++ A+K L ++ + V + + E +L V
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDD----DEAIELNWTRRVNIVKSVAH 563
H IVKL+ + ++ I +++ G LF L + +E ++ + +A
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 137
Query: 564 ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNRTLR-AGTYGYI 622
AL +LH + I++RD + DFG ++ +D + GT Y+
Sbjct: 138 ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYM 193
Query: 623 APD 625
AP+
Sbjct: 194 APE 196
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 38/187 (20%)
Query: 216 NKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXX 275
+K+ IPS+ ++ DLSFN L NFS L LDLS +I I D+
Sbjct: 24 SKVPDDIPSSTKNI------DLSFNPLKILKSYSFSNFSELQWLDLSRCEIET-IEDK-- 74
Query: 276 XXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNH 335
A L +L +L L+ N + P T L++L
Sbjct: 75 ---------------------AWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVE 113
Query: 336 NSLDGTIPPEIGKILLLQNLDLSHNNL-SGTIPMTLHPM----FLDMSFNNLEGEIPT-- 388
L IG+++ L+ L+++HN + S +P + +D+S+N ++
Sbjct: 114 TKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173
Query: 389 -YLRDNP 394
+LR+NP
Sbjct: 174 QFLRENP 180
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 76 GSIPPQIGSLSNLKY--LNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSL 133
GS+ P I + N+ Y ++ + + + IP S +N++ LS N L +
Sbjct: 2 GSLNPCIEVVPNITYQCMDQKLSKVPDDIP---SSTKNID---LSFNPLKILKSYSFSNF 55
Query: 134 RNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQ 193
L+ L L ++ + + L L L + N + P + LT+LE L +
Sbjct: 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETK 115
Query: 194 FNGTIPREIGNLKNLTHLSIITNKL-TGAIPSTLGHLTSLLYLDLSFNQLHS 244
IG L L L++ N + + +P+ +LT+L+++DLS+N + +
Sbjct: 116 LASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 112/293 (38%), Gaps = 53/293 (18%)
Query: 432 VTGGYDGKILYEDLINATEDFHIRYCIGTGGYG-SVYKAELPDGKVVALKKLHQSETEDS 490
V+G D I+++ ++ + + IG+G +G + + ++VA+K + + E
Sbjct: 6 VSGPMDLPIMHD-----SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK--- 57
Query: 491 AFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVL----RDDDEA 546
+ + E ++RH NIV+ L + + EY G LF + R ++
Sbjct: 58 -IAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 547 IELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR--L 604
+ + ++ V S HA+ H D D + DFG ++ +
Sbjct: 117 ARFFFQQLISGV-SYCHAMQVCHRDLKLENTLLDGSPAPRLK-------ICDFGYSKSSV 168
Query: 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL--------RSKPK 656
LH S GT YIAP+ L + K + D+ T L +PK
Sbjct: 169 LH---SQPKSTVGTPAYIAPEVLLKKEYDGK-VADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Query: 657 S-RPTMQRI----------------SQELEGKTPMKKGLKEISISEMRNQEMF 692
+ R T+ RI + L + + K ISI E+RN E F
Sbjct: 225 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 53/293 (18%)
Query: 432 VTGGYDGKILYEDLINATEDFHIRYCIGTGGYG-SVYKAELPDGKVVALKKLHQSETEDS 490
V+G D I+++ ++ + + IG+G +G + + ++VA+K + + E D
Sbjct: 6 VSGPMDLPIMHD-----SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID- 59
Query: 491 AFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVL----RDDDEA 546
E+ + E ++RH NIV+ L + + EY G LF + R ++
Sbjct: 60 ---ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 547 IELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR--L 604
+ + ++ V S HA+ H D D + FG ++ +
Sbjct: 117 ARFFFQQLISGV-SYCHAMQVCHRDLKLENTLLDGSPAPRLK-------ICAFGYSKSSV 168
Query: 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL--------RSKPK 656
LH S GT YIAP+ L + K + D+ T L +PK
Sbjct: 169 LH---SQPKSTVGTPAYIAPEVLLKKEYDGK-VADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Query: 657 S-RPTMQRI----------------SQELEGKTPMKKGLKEISISEMRNQEMF 692
+ R T+ RI + L + + K ISI E+RN E F
Sbjct: 225 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 25/194 (12%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+++ I IG G YG V A G+ VA+KK+ + + + + E ++L +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 113
Query: 509 RNIVKL---------YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
NI+ + YG + ++ + + ME S + + + + L R +
Sbjct: 114 DNIIAIKDILRPTVPYG---EFKSVYVVLDLME--SDLHQIIHSSQPLTLEHVR--YFLY 166
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR----TLR 615
+ L Y+H + ++HRD E + DFG AR L + T
Sbjct: 167 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 616 AGTYGYIAPDQRLS 629
T Y AP+ LS
Sbjct: 224 VATRWYRAPELMLS 237
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161
+P ++ + N+ VL L++N L L L + N +S + P+ L L
Sbjct: 24 VPDDLPT--NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 81
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
L++ +N + T TNL L L N KNL L + N L+
Sbjct: 82 VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 141
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNF--SALAELDLSDNKIRGIIP 271
T L +L L LS N++ + E+ F S+L +L+LS N+I+ P
Sbjct: 142 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 193
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 113/293 (38%), Gaps = 53/293 (18%)
Query: 432 VTGGYDGKILYEDLINATEDFHIRYCIGTGGYG-SVYKAELPDGKVVALKKLHQSETEDS 490
V+G D I+++ ++ + + IG+G +G + + ++VA+K + + E D
Sbjct: 6 VSGPMDLPIMHD-----SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID- 59
Query: 491 AFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVL----RDDDEA 546
E+ + E ++RH NIV+ L + + EY G LF + R ++
Sbjct: 60 ---ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 547 IELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR--L 604
+ + ++ V S HA+ H D D + FG ++ +
Sbjct: 117 ARFFFQQLISGV-SYCHAMQVCHRDLKLENTLLDGSPAPRLK-------ICAFGYSKSSV 168
Query: 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL--------RSKPK 656
LH + GT YIAP+ L + K + D+ T L +PK
Sbjct: 169 LHSQPKDTV---GTPAYIAPEVLLKKEYDGK-VADVWSCGVTLYVMLVGAYPFEDPEEPK 224
Query: 657 S-RPTMQRI----------------SQELEGKTPMKKGLKEISISEMRNQEMF 692
+ R T+ RI + L + + K ISI E+RN E F
Sbjct: 225 NFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Query: 89 KYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSG 148
K L+L WN L S L+VL LS + SL +L L L N +
Sbjct: 33 KNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 92
Query: 149 VLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG-TIPREIGNLKN 207
+ L SL L + + + L L+ L + N +P NL N
Sbjct: 93 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 152
Query: 208 LTHLSIITNKL 218
L HL + +NK+
Sbjct: 153 LEHLDLSSNKI 163
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 82 IGSLSNLKYLNLRWNNLTG-TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL- 139
IG L LK LN+ N + +P+ +L NLE L LS+N + I LR L ++
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---IYCTDLRVLHQMP 178
Query: 140 ------YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCN 192
L N ++ + P ++ L L++ N + +P +F RLT+L++++L N
Sbjct: 179 LLNLSLDLSLNPMNFIQPGAFKEIR-LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 236
Query: 193 QFNGTIPR 200
++ + PR
Sbjct: 237 PWDCSCPR 244
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 39/258 (15%)
Query: 133 LRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN--TVGGPIPSTLFRLTNLERLFLG 190
L++L+ L SNK G E+ +L SL +L + N + G + F T+L+ L L
Sbjct: 324 LKSLKRLTFTSNK-GGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLS 381
Query: 191 CNQFNG--TIPREIGNLKNLTHLSIITNKLTGAIP-STLGHLTSLLYLDLSFNQLHSFIP 247
FNG T+ L+ L HL + L S L +L+YLD+S H+ +
Sbjct: 382 ---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS--HTHTRVA 436
Query: 248 LEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSL 307
G F+ L+ L++ K+ G E +P +L NL L
Sbjct: 437 FN-GIFNGLSSLEVL--KMAGNSFQENF------------------LPDIFTELRNLTFL 475
Query: 308 DLSKNKLSGSFPTGIGNCTELQHLALNHN---SLDGTIPPEIGKILLLQNLDLSHNNLSG 364
DLS+ +L PT + + LQ L ++HN SLD T P + LQ LD S N++
Sbjct: 476 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD-TFPYKCLNS--LQVLDYSLNHIMT 532
Query: 365 TIPMTLHPMFLDMSFNNL 382
+ L ++F NL
Sbjct: 533 SKKQELQHFPSSLAFLNL 550
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 78 IPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137
+P L NL +L+L L P SL +L+VL +S+N+ L +L+
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 521
Query: 138 ELYLRSNKLSGVLPQEIGNL-KSLIWLSVMYNTVG 171
L N + QE+ + SL +L++ N
Sbjct: 522 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGT-TPIEIGSLRNLEELYLR 142
SL NL YL++ + L +LEVL ++ NS P LRNL L L
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 143 SNKLSGVLPQEIGNLKSLIWLSVMYN 168
+L + P +L SL L++ +N
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMSHN 504
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 23/111 (20%)
Query: 108 SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
SL +L L L+ N + L +L++L L+ + IG+LK+L L+V +
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133
Query: 168 NTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
N + F+L P NL NL HL + +NK+
Sbjct: 134 NLIQS------FKL-----------------PEYFSNLTNLEHLDLSSNKI 161
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161
+P ++ + N+ VL L++N L L L + N +S + P+ L L
Sbjct: 29 VPDDLPT--NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 86
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
L++ +N + T TNL L L N KNL L + N L+
Sbjct: 87 VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 146
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNF--SALAELDLSDNKIRGIIP 271
T L +L L LS N++ + E+ F S+L +L+LS N+I+ P
Sbjct: 147 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 198
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161
+P ++ + N+ VL L++N L L L + N +S + P+ L L
Sbjct: 19 VPDDLPT--NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLK 76
Query: 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221
L++ +N + T TNL L L N KNL L + N L+
Sbjct: 77 VLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST 136
Query: 222 IPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNF--SALAELDLSDNKIRGIIP 271
T L +L L LS N++ + E+ F S+L +L+LS N+I+ P
Sbjct: 137 KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 188
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 451 DFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR 509
DF C+G GG+G V++A+ D A+K++ E + E E + L+ + H
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKLEHP 64
Query: 510 NIVKLYGFCLH 520
IV+ + L
Sbjct: 65 GIVRYFNAWLE 75
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 36/163 (22%)
Query: 458 IGTGGYGSV---YKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKL 514
+G+G YGSV Y A L + VA+KKL + + E R+L ++H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 515 YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVA------------ 562
+F +E S Y++ A +LN NIVKS A
Sbjct: 93 LD-------VFTPATSIEDFSEVYLVTTLMGA-DLN-----NIVKSQALSDEHVQFLVYQ 139
Query: 563 --HALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
L Y+H + I+HRD E + DFG AR
Sbjct: 140 LLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 69/193 (35%), Gaps = 36/193 (18%)
Query: 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGH----- 228
+P T + LE L L N +P I +L L LSI +P L
Sbjct: 119 LPDTXQQFAGLETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASG 177
Query: 229 ----LTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXX 284
L +L L L + + S +P I N L L + ++ + + P
Sbjct: 178 EHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLSALGP------------- 223
Query: 285 XXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPP 344
AI L L LDL ++P G L+ L L S T+P
Sbjct: 224 ------------AIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPL 271
Query: 345 EIGKILLLQNLDL 357
+I ++ L+ LDL
Sbjct: 272 DIHRLTQLEKLDL 284
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKL 146
NL+YL+L N+L L+ LEVL L NN + + L++LYL N++
Sbjct: 89 NLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148
Query: 147 S 147
S
Sbjct: 149 S 149
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 29/139 (20%)
Query: 180 RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSF 239
RLTNL L L N HL+ I+++ +P+ L YLDLS
Sbjct: 62 RLTNLHSLLLSHN-----------------HLNFISSEAFVPVPN-------LRYLDLSS 97
Query: 240 NQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAI- 298
N LH+ + AL L L +N I ++ + P +
Sbjct: 98 NHLHTLDEFLFSDLQALEVLLLYNNHI-VVVDRNAFEDMAQLQKLYLSQNQISRFPVELI 156
Query: 299 ---GKLFNLVSLDLSKNKL 314
KL L+ LDLS NKL
Sbjct: 157 KDGNKLPKLMLLDLSSNKL 175
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 50/131 (38%), Gaps = 1/131 (0%)
Query: 89 KYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSG 148
K L+L WN L S L+VL LS + SL +L L L N +
Sbjct: 32 KNLDLSWNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 91
Query: 149 VLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG-TIPREIGNLKN 207
+ L SL L + + + L L+ L + N +P NL N
Sbjct: 92 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 151
Query: 208 LTHLSIITNKL 218
L HL + +NK+
Sbjct: 152 LEHLDLSSNKI 162
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 82 IGSLSNLKYLNLRWNNLTG-TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL- 139
IG L LK LN+ N + +P+ +L NLE L LS+N + I LR L ++
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---IYCTDLRVLHQMP 177
Query: 140 ------YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCN 192
L N ++ + P ++ L L++ N + +P +F RLT+L++++L N
Sbjct: 178 LLNLSLDLSLNPMNFIQPGAFKEIR-LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 235
Query: 193 QFNGTIPR 200
++ + PR
Sbjct: 236 PWDCSCPR 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 25/194 (12%)
Query: 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH 508
+++ I IG G YG V A G+ VA+KK+ + + + + E ++L +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKH 112
Query: 509 RNIVKL---------YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVK 559
NI+ + YG + ++ + + ME S + + + + L R +
Sbjct: 113 DNIIAIKDILRPTVPYG---EFKSVYVVLDLME--SDLHQIIHSSQPLTLEHVR--YFLY 165
Query: 560 SVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSSNR----TLR 615
+ L Y+H + ++HRD E + DFG AR L + T
Sbjct: 166 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 616 AGTYGYIAPDQRLS 629
T Y AP+ LS
Sbjct: 223 VATRWYRAPELMLS 236
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
Query: 493 VESFQNEARVLSTVRHRNIVKLYGFC--LHKRCMFFIYEYMERGSLFYVLRDDDEAIELN 550
+E E +L + H N+VKL ++ ++ ++E + +G + V L+
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV----PTLKPLS 135
Query: 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVDSS 610
+ + + + YLH+ I+HRD +ADFG + +
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 611 NRTLRAGTYGYIAPD 625
+ GT ++AP+
Sbjct: 193 LLSNTVGTPAFMAPE 207
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 82 IGSLSNLKYLNLRWNNLTG-TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL- 139
IG L LK LN+ N + +P+ +L NLE L LS+N + I LR L ++
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---IYCTDLRVLHQMP 176
Query: 140 ------YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCN 192
L N ++ + P ++ L L++ N + +P +F RLT+L++++L N
Sbjct: 177 LLNLSLDLSLNPMNFIQPGAFKEIR-LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 234
Query: 193 QFNGTIPR 200
++ + PR
Sbjct: 235 PWDCSCPR 242
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 23/111 (20%)
Query: 108 SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
SL +L L L+ N + L +L++L L+ + IG+LK+L L+V +
Sbjct: 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133
Query: 168 NTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
N + F+L P NL NL HL + +NK+
Sbjct: 134 NLIQS------FKL-----------------PEYFSNLTNLEHLDLSSNKI 161
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 82 IGSLSNLKYLNLRWNNLTG-TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL- 139
IG L LK LN+ N + +P+ +L NLE L LS+N + I LR L ++
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---IYCTDLRVLHQMP 177
Query: 140 ------YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCN 192
L N ++ + P ++ L L++ N + +P +F RLT+L++++L N
Sbjct: 178 LLNLSLDLSLNPMNFIQPGAFKEIR-LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 235
Query: 193 QFNGTIPR 200
++ + PR
Sbjct: 236 PWDCSCPR 243
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 23/111 (20%)
Query: 108 SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
SL +L L L+ N + L +L++L L+ + IG+LK+L L+V +
Sbjct: 75 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 134
Query: 168 NTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
N + F+L P NL NL HL + +NK+
Sbjct: 135 NLIQS------FKL-----------------PEYFSNLTNLEHLDLSSNKI 162
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 431 LVTGGYDGKILYE-DLINATEDFHIRYCIGTGGYG--SVYKAELPDGKVVALKKLHQSET 487
+ TG D I+++ D + +D IG+G +G + + +L ++VA+K + +
Sbjct: 6 VTTGPLDMPIMHDSDRYDFVKD------IGSGNFGVARLMRDKL-TKELVAVKYIERG-- 56
Query: 488 EDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAI 547
+A E+ Q E ++RH NIV+ L + I EY G L+ + + A
Sbjct: 57 --AAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN---AG 111
Query: 548 ELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDXXXXXXXX--XXXXEAFVADFGTAR-- 603
+ + + +SY H + I HRD + DFG ++
Sbjct: 112 RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168
Query: 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKI 636
+LH S GT YIAP+ L + KI
Sbjct: 169 VLH---SQPKSTVGTPAYIAPEVLLRQEYDGKI 198
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 82 IGSLSNLKYLNLRWNNLTG-TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL- 139
IG L LK LN+ N + +P+ +L NLE L LS+N + I LR L ++
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---IYCTDLRVLHQMP 178
Query: 140 ------YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF-RLTNLERLFLGCN 192
L N ++ + P ++ L L++ N + +P +F RLT+L++++L N
Sbjct: 179 LLNLSLDLSLNPMNFIQPGAFKEIR-LKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTN 236
Query: 193 QFNGTIPR 200
++ + PR
Sbjct: 237 PWDCSCPR 244
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 23/111 (20%)
Query: 108 SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
SL +L L L+ N + L +L++L L+ + IG+LK+L L+V +
Sbjct: 76 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNLASLENFPIGHLKTLKELNVAH 135
Query: 168 NTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
N + F+L P NL NL HL + +NK+
Sbjct: 136 NLIQS------FKL-----------------PEYFSNLTNLEHLDLSSNKI 163
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 90 YLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLS 147
+L+L N L +P + +LR LEVL S+N+L + +L L+EL L +N+L
Sbjct: 467 HLDLSHNRLRA-LPPALAALRCLEVLQASDNALENVDG--VANLPRLQELLLCNNRLQ 521
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 90 YLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLS 147
+L+L N L +P + +LR LEVL S+N+L + +L L+EL L +N+L
Sbjct: 467 HLDLSHNRLRA-LPPALAALRCLEVLQASDNALENVDG--VANLPRLQELLLCNNRLQ 521
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 458 IGTGGYGSV---YKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKL 514
+G+G YGSV Y A L + VA+KKL + + E R+L ++H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGL 92
Query: 515 YG-FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
F F Y+ + L + + L+ +V + L Y+H +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---S 149
Query: 574 PSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
I+HRD E + DFG AR
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 497 QNEARVLSTVRHRNIVKLYG--FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRR 554
+ E ++L +RH+N+++L + K+ M+ + EY G E ++ +R
Sbjct: 54 KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--------QEMLDSVPEKR 105
Query: 555 VNIVKSVAH------ALSYLHHDCTPSIVHRDXXXXXXXXXXXXEAFVADFGTARLLHVD 608
+ ++ + L YLH + IVH+D ++ G A LH
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 609 SSNRTLRA--GTYGYIAPD 625
+++ T R G+ + P+
Sbjct: 163 AADDTCRTSQGSPAFQPPE 181
>pdb|3OJA|A Chain A, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 487
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 61/234 (26%)
Query: 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKL 146
N+K L+L N L+ ++ LE+L LS+N L+ T +E SL L L L +N +
Sbjct: 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLE--SLSTLRTLDLNNNYV 92
Query: 147 SGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLK 206
+L VG I + N+ R + C++ G
Sbjct: 93 QELL-------------------VGPSIETLHAANNNISR--VSCSRGQGK--------- 122
Query: 207 NLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFS-ALAELDLSDNK 265
++ + NK+T G + + YLDL N++ + E+ S L L+L N
Sbjct: 123 --KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180
Query: 266 IRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFP 319
I + GQ+ FA L +LDLS NKL+ P
Sbjct: 181 IYDV---------------------KGQVVFA-----KLKTLDLSSNKLAFMGP 208
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 39/258 (15%)
Query: 133 LRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN--TVGGPIPSTLFRLTNLERLFLG 190
L++L+ L SNK G E+ +L SL +L + N + G + F +L+ L L
Sbjct: 348 LKSLKRLTFTSNK-GGNAFSEV-DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLS 405
Query: 191 CNQFNG--TIPREIGNLKNLTHLSIITNKLTGAIP-STLGHLTSLLYLDLSFNQLHSFIP 247
FNG T+ L+ L HL + L S L +L+YLD+S H+ +
Sbjct: 406 ---FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS--HTHTRVA 460
Query: 248 LEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSL 307
G F+ L+ L++ K+ G E +P +L NL L
Sbjct: 461 FN-GIFNGLSSLEVL--KMAGNSFQENF------------------LPDIFTELRNLTFL 499
Query: 308 DLSKNKLSGSFPTGIGNCTELQHLALNHN---SLDGTIPPEIGKILLLQNLDLSHNNLSG 364
DLS+ +L PT + + LQ L ++HN SLD T P + + LQ LD S N++
Sbjct: 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD-TFPYKC--LNSLQVLDYSLNHIMT 556
Query: 365 TIPMTLHPMFLDMSFNNL 382
+ L ++F NL
Sbjct: 557 SKKQELQHFPSSLAFLNL 574
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 78 IPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137
+P L NL +L+L L P SL +L+VL +S+N+ L +L+
Sbjct: 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545
Query: 138 ELYLRSNKLSGVLPQEIGNL-KSLIWLSVMYNTVG 171
L N + QE+ + SL +L++ N
Sbjct: 546 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGT-TPIEIGSLRNLEELYLR 142
SL NL YL++ + L +LEVL ++ NS P LRNL L L
Sbjct: 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502
Query: 143 SNKLSGVLPQEIGNLKSLIWLSVMYN 168
+L + P +L SL L++ +N
Sbjct: 503 QCQLEQLSPTAFNSLSSLQVLNMSHN 528
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 23/111 (20%)
Query: 108 SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMY 167
SL +L L L+ N + L +L++L L+ + IG+LK+L L+V +
Sbjct: 98 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 157
Query: 168 NTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218
N + F+L P NL NL HL + +NK+
Sbjct: 158 NLIQS------FKL-----------------PEYFSNLTNLEHLDLSSNKI 185
>pdb|3HX3|A Chain A, Crystal Structure Of Cralbp Mutant R234w
Length = 316
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 418 FILLLKGKSENL----KLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYKAELPD 473
F+ ++ + N+ +L+ G + ++ Y +L ++ +R C GY V +
Sbjct: 95 FLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVR-CTIEAGYPGVLSSRDKY 153
Query: 474 GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL 519
G+VV L + ++++ F E Q +L + ++ GFC+
Sbjct: 154 GRVVXLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCI 199
>pdb|3HY5|A Chain A, Crystal Structure Of Cralbp
Length = 316
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 418 FILLLKGKSENL----KLVTGGYDGKILYEDLINATEDFHIRYCIGTGGYGSVYKAELPD 473
F+ ++ + N+ +L+ G + ++ Y +L ++ +R C GY V +
Sbjct: 95 FLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVR-CTIEAGYPGVLSSRDKY 153
Query: 474 GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL 519
G+VV L + ++++ F E Q +L + ++ GFC+
Sbjct: 154 GRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCI 199
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 458 IGTGGYGSV---YKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKL 514
+G+G YGSV Y A L + VA+KKL + + E R+L ++H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRP-FQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 515 YG-FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT 573
F F Y+ + L + + L+ +V + L Y+H +
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH---S 141
Query: 574 PSIVHRDXXXXXXXXXXXXEAFVADFGTAR 603
I+HRD E + DFG AR
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|1DS9|A Chain A, Solution Structure Of Chlamydomonas Outer Arm Dynein Light
Chain 1
Length = 198
Score = 29.6 bits (65), Expect = 6.6, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 106 IGSLRNLEVLYLSNNSLHGTTPIE-IGSLRNLEELYLRSNKL 146
I L NL VLY+SNN + I+ + +L LE+L L N L
Sbjct: 111 IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152
>pdb|3O53|A Chain A, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
pdb|3O53|B Chain B, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
Length = 317
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 61/234 (26%)
Query: 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKL 146
N+K L+L N L+ ++ LE+L LS+N L+ T +E SL L L L +N +
Sbjct: 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLE--SLSTLRTLDLNNNYV 92
Query: 147 SGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLK 206
+L VG I + N+ R + C++ G
Sbjct: 93 QELL-------------------VGPSIETLHAANNNISR--VSCSRGQGK--------- 122
Query: 207 NLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFS-ALAELDLSDNK 265
++ + NK+T G + + YLDL N++ + E+ S L L+L N
Sbjct: 123 --KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180
Query: 266 IRGIIPDEXXXXXXXXXXXXXXXXXXGQIPFAIGKLFNLVSLDLSKNKLSGSFP 319
I + GQ+ FA L +LDLS NKL+ P
Sbjct: 181 IYDV---------------------KGQVVFA-----KLKTLDLSSNKLAFMGP 208
>pdb|1M9L|A Chain A, Relaxation-Based Refined Structure Of Chlamydomonas Outer
Arm Dynein Light Chain 1
Length = 199
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 106 IGSLRNLEVLYLSNNSLHGTTPIE-IGSLRNLEELYLRSNKL 146
I L NL VLY+SNN + I+ + +L LE+L L N L
Sbjct: 112 IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 153
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 114/293 (38%), Gaps = 64/293 (21%)
Query: 85 LSNLKYLNLRWNNLTGTIPKE--IGSLRNLEVLYLSNNSLHGTTPIEIG-SLRNLEELYL 141
L+NL+ L L NL G + L +LE+L L +N++ P ++R L L
Sbjct: 102 LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDL 161
Query: 142 RSNKLSGVLPQEIGNLK----SLIWLSVM-----------YNTVGGPIPSTLFRLTNLER 186
NK+ + +++ N + +L+ LS + + G P F+ T++
Sbjct: 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP-----FKNTSITT 216
Query: 187 LFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGH---------------LTS 231
L L N F ++ + + T + + + + S+ GH +
Sbjct: 217 LDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASG 276
Query: 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEXXXXXXXXXXXXXXXXXX 291
+ DLS +++ + + +F+ L +L L+ N+I I +
Sbjct: 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN------------------- 317
Query: 292 GQIPFAIGKLFNLVSLDLSKNKLSGSFPTGI-GNCTELQHLALNHNSLDGTIP 343
A L +L L L N+L S P GI T LQ + L+ N D + P
Sbjct: 318 -----AFWGLTHLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 364
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,873,364
Number of Sequences: 62578
Number of extensions: 813776
Number of successful extensions: 3990
Number of sequences better than 100.0: 965
Number of HSP's better than 100.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 590
Number of HSP's that attempted gapping in prelim test: 2208
Number of HSP's gapped (non-prelim): 1433
length of query: 701
length of database: 14,973,337
effective HSP length: 106
effective length of query: 595
effective length of database: 8,340,069
effective search space: 4962341055
effective search space used: 4962341055
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)