Query 041034
Match_columns 701
No_of_seqs 862 out of 5464
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 04:35:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041034.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041034hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.1E-51 3.7E-56 482.9 22.4 383 2-391 11-511 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.1E-51 7.2E-56 480.4 21.8 372 37-408 269-744 (768)
3 4eco_A Uncharacterized protein 100.0 1.1E-49 3.9E-54 455.4 24.2 380 2-391 29-563 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 6.8E-48 2.3E-52 448.1 27.9 358 2-369 268-771 (876)
5 4b9d_A Serine/threonine-protei 100.0 1.3E-46 4.6E-51 391.3 14.9 194 449-649 23-217 (350)
6 4fih_A Serine/threonine-protei 100.0 6.9E-46 2.3E-50 385.3 18.4 208 449-668 73-282 (346)
7 4aoj_A High affinity nerve gro 100.0 1.9E-45 6.6E-50 382.7 18.2 216 449-672 40-318 (329)
8 4gt4_A Tyrosine-protein kinase 100.0 1.9E-45 6.6E-50 379.1 16.9 194 449-649 25-239 (308)
9 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-45 5E-50 378.3 15.7 193 449-649 12-222 (299)
10 3hyh_A Carbon catabolite-derep 100.0 4.3E-45 1.5E-49 368.7 17.6 212 450-671 13-227 (275)
11 4fie_A Serine/threonine-protei 100.0 7.3E-45 2.5E-49 386.9 20.1 208 449-668 150-359 (423)
12 4g3f_A NF-kappa-beta-inducing 100.0 1.3E-45 4.6E-50 382.1 13.5 185 449-649 57-248 (336)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.7E-45 1.3E-49 374.2 16.6 214 449-670 31-248 (311)
14 3omv_A RAF proto-oncogene seri 100.0 5.9E-45 2E-49 373.7 18.1 215 445-670 31-297 (307)
15 4g31_A Eukaryotic translation 100.0 1.3E-44 4.5E-49 371.9 18.7 195 450-651 5-224 (299)
16 3fpq_A Serine/threonine-protei 100.0 4.3E-44 1.5E-48 364.6 19.9 209 452-670 28-244 (290)
17 3v47_A TOLL-like receptor 5B a 100.0 2E-43 6.8E-48 388.8 25.0 365 22-387 4-412 (455)
18 3ubd_A Ribosomal protein S6 ki 100.0 3.6E-44 1.2E-48 366.9 12.5 213 449-670 23-240 (304)
19 3j0a_A TOLL-like receptor 5; m 100.0 3.2E-42 1.1E-46 406.9 28.6 380 25-406 13-562 (844)
20 3hmm_A TGF-beta receptor type- 100.0 2.5E-43 8.4E-48 364.2 16.1 195 450-653 3-214 (303)
21 4ase_A Vascular endothelial gr 100.0 1.3E-43 4.5E-48 371.8 13.7 222 442-670 56-344 (353)
22 3vq2_A TLR4, TOLL-like recepto 100.0 2.9E-42 9.8E-47 393.7 24.7 145 37-182 32-177 (606)
23 4eco_A Uncharacterized protein 100.0 2.2E-42 7.5E-47 395.2 21.6 350 26-384 193-601 (636)
24 3v47_A TOLL-like receptor 5B a 100.0 8.3E-42 2.8E-46 375.8 22.9 360 42-406 15-410 (455)
25 3t6q_A CD180 antigen; protein- 100.0 5.8E-41 2E-45 382.8 28.7 356 37-394 33-449 (606)
26 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-42 9.2E-47 359.7 14.2 288 1-317 4-307 (313)
27 2id5_A Lingo-1, leucine rich r 100.0 5.6E-41 1.9E-45 371.5 25.2 331 61-391 31-364 (477)
28 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-41 5.7E-46 382.6 21.3 370 25-406 3-512 (549)
29 3t6q_A CD180 antigen; protein- 100.0 1.9E-40 6.5E-45 378.6 29.2 330 37-368 57-443 (606)
30 2z63_A TOLL-like receptor 4, v 100.0 6.3E-41 2.1E-45 379.7 24.0 356 35-393 26-517 (570)
31 4ecn_A Leucine-rich repeat pro 100.0 7.9E-41 2.7E-45 388.8 23.9 350 26-385 435-842 (876)
32 3vq2_A TLR4, TOLL-like recepto 100.0 1E-40 3.4E-45 380.9 22.2 366 37-406 56-560 (606)
33 2z7x_B TOLL-like receptor 1, v 100.0 5.8E-40 2E-44 367.5 26.3 346 28-388 12-461 (520)
34 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.1E-39 3.6E-44 368.6 27.2 333 40-388 34-490 (562)
35 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3E-39 1E-43 365.0 29.4 340 35-387 50-514 (562)
36 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-39 4.4E-44 376.8 26.9 351 36-387 24-422 (680)
37 2z7x_B TOLL-like receptor 1, v 100.0 3.9E-39 1.3E-43 360.7 25.8 337 36-387 44-485 (520)
38 4b99_A Mitogen-activated prote 100.0 1.1E-39 3.7E-44 348.1 19.8 199 449-657 53-263 (398)
39 2z81_A CD282 antigen, TOLL-lik 100.0 4.4E-39 1.5E-43 362.8 25.8 347 31-389 2-469 (549)
40 4f9c_A Cell division cycle 7-r 100.0 2.5E-39 8.6E-44 341.7 21.3 199 442-656 13-246 (361)
41 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-38 7.4E-43 366.6 30.5 351 37-388 49-498 (680)
42 3j0a_A TOLL-like receptor 5; m 100.0 2.1E-38 7.1E-43 374.3 30.3 335 43-383 10-394 (844)
43 2id5_A Lingo-1, leucine rich r 100.0 1.2E-38 4.1E-43 352.8 24.4 344 27-372 12-365 (477)
44 3v5w_A G-protein coupled recep 100.0 4.2E-39 1.4E-43 357.6 18.8 200 449-658 188-392 (689)
45 3oja_B Anopheles plasmodium-re 100.0 1.9E-38 6.3E-43 360.6 24.3 334 61-409 50-385 (597)
46 3uto_A Twitchin; kinase, muscl 100.0 8.2E-39 2.8E-43 358.2 19.6 210 449-669 156-369 (573)
47 2z63_A TOLL-like receptor 4, v 100.0 1.3E-38 4.5E-43 360.6 21.0 349 37-388 52-536 (570)
48 4g8a_A TOLL-like receptor 4; l 100.0 7.9E-38 2.7E-42 358.7 26.7 347 37-384 52-581 (635)
49 3o6n_A APL1; leucine-rich repe 100.0 7.6E-38 2.6E-42 337.0 23.7 333 60-407 43-377 (390)
50 3bz5_A Internalin-J, INLJ; leu 100.0 4E-37 1.4E-41 336.9 28.0 325 36-392 41-396 (457)
51 3s95_A LIMK-1, LIM domain kina 100.0 1.6E-37 5.4E-42 323.6 18.6 214 449-672 9-281 (310)
52 3p86_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 325.7 16.0 224 442-672 29-297 (309)
53 3fxz_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 318.9 20.5 193 448-652 18-211 (297)
54 3o6n_A APL1; leucine-rich repe 100.0 5.2E-37 1.8E-41 330.5 22.3 312 37-367 45-356 (390)
55 1o6v_A Internalin A; bacterial 100.0 2.2E-36 7.6E-41 333.3 27.5 323 37-384 46-389 (466)
56 3uim_A Brassinosteroid insensi 100.0 1.7E-37 5.9E-42 325.7 17.1 234 437-674 17-312 (326)
57 3oja_B Anopheles plasmodium-re 100.0 1.1E-36 3.9E-41 345.8 23.0 311 38-367 52-362 (597)
58 4eqm_A Protein kinase; transfe 100.0 1.2E-36 4.1E-41 314.3 20.2 196 449-652 10-207 (294)
59 1o6l_A RAC-beta serine/threoni 100.0 7.5E-37 2.6E-41 321.3 18.8 198 449-654 4-202 (337)
60 3fe3_A MAP/microtubule affinit 100.0 5.7E-37 1.9E-41 321.2 17.5 194 447-649 12-206 (328)
61 4g8a_A TOLL-like receptor 4; l 100.0 4.5E-36 1.6E-40 344.1 26.7 345 62-406 52-582 (635)
62 2c30_A Serine/threonine-protei 100.0 2.5E-36 8.7E-41 315.9 22.3 205 438-654 23-238 (321)
63 3zgw_A Maternal embryonic leuc 100.0 5.2E-37 1.8E-41 323.4 15.8 193 447-649 7-202 (347)
64 3qd2_B Eukaryotic translation 100.0 1.6E-36 5.5E-41 319.0 19.4 198 449-653 5-272 (332)
65 2qkw_B Protein kinase; three-h 100.0 4.1E-37 1.4E-41 322.1 13.4 203 439-649 28-233 (321)
66 4fmz_A Internalin; leucine ric 100.0 1.5E-35 5.1E-40 313.8 24.8 303 37-363 44-346 (347)
67 1o6v_A Internalin A; bacterial 100.0 1.2E-35 4E-40 327.5 24.5 307 37-369 68-393 (466)
68 2yab_A Death-associated protei 100.0 6.2E-36 2.1E-40 317.2 20.7 197 448-653 10-214 (361)
69 3soa_A Calcium/calmodulin-depe 100.0 4.7E-36 1.6E-40 326.5 20.2 194 448-650 9-206 (444)
70 2psq_A Fibroblast growth facto 100.0 2.8E-36 9.6E-41 321.8 17.8 197 448-651 79-299 (370)
71 4dc2_A Protein kinase C IOTA t 100.0 2.7E-36 9.2E-41 322.9 17.7 201 449-657 51-253 (396)
72 3kul_A Ephrin type-A receptor 100.0 1.8E-36 6.1E-41 317.6 15.8 216 449-673 48-313 (325)
73 3sxs_A Cytoplasmic tyrosine-pr 100.0 2E-36 6.9E-41 308.2 15.1 216 447-673 5-264 (268)
74 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.1E-36 7.3E-41 317.5 15.6 192 449-649 8-200 (336)
75 3a8x_A Protein kinase C IOTA t 100.0 9.4E-36 3.2E-40 314.3 20.5 201 449-657 8-210 (345)
76 1ogq_A PGIP-2, polygalacturona 100.0 6.7E-37 2.3E-41 318.9 11.5 252 87-341 51-307 (313)
77 1tki_A Titin; serine kinase, m 100.0 6.2E-36 2.1E-40 312.8 18.7 193 448-652 3-198 (321)
78 3niz_A Rhodanese family protei 100.0 8E-36 2.7E-40 310.7 19.4 200 447-655 18-218 (311)
79 4hcu_A Tyrosine-protein kinase 100.0 2.9E-36 9.9E-41 307.3 15.1 194 448-652 8-202 (269)
80 2ft3_A Biglycan; proteoglycan, 100.0 4.1E-35 1.4E-39 308.4 24.2 268 62-361 54-331 (332)
81 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.7E-36 1.3E-40 318.1 16.3 214 448-669 21-237 (353)
82 4fmz_A Internalin; leucine ric 100.0 3.9E-35 1.3E-39 310.6 24.0 305 58-383 40-346 (347)
83 3c0i_A Peripheral plasma membr 100.0 4.4E-36 1.5E-40 318.1 16.0 196 449-649 23-225 (351)
84 2nru_A Interleukin-1 receptor- 100.0 2.1E-35 7.3E-40 307.0 20.8 205 438-649 13-226 (307)
85 2zv2_A Calcium/calmodulin-depe 100.0 1.2E-35 4E-40 307.6 18.6 212 449-667 12-251 (298)
86 1xku_A Decorin; proteoglycan, 100.0 7.2E-35 2.4E-39 306.3 24.6 269 62-361 52-330 (330)
87 2y0a_A Death-associated protei 100.0 1.4E-35 4.7E-40 311.0 18.9 196 448-652 9-212 (326)
88 3bz5_A Internalin-J, INLJ; leu 100.0 6E-35 2.1E-39 319.6 24.7 300 57-384 37-353 (457)
89 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-35 4.2E-40 309.3 18.2 194 449-653 56-251 (311)
90 2qol_A Ephrin receptor; recept 100.0 7.1E-36 2.4E-40 318.9 16.6 215 449-672 44-308 (373)
91 4fr4_A YANK1, serine/threonine 100.0 9.3E-36 3.2E-40 317.6 17.3 199 449-656 14-216 (384)
92 2bdw_A Hypothetical protein K1 100.0 1.8E-35 6.3E-40 314.3 19.3 197 448-654 27-227 (362)
93 1fot_A TPK1 delta, CAMP-depend 100.0 1.3E-35 4.6E-40 309.4 17.8 197 449-656 5-202 (318)
94 2r5t_A Serine/threonine-protei 100.0 1.2E-35 4.2E-40 316.1 17.6 199 449-655 37-237 (373)
95 3tki_A Serine/threonine-protei 100.0 8.8E-36 3E-40 312.0 15.9 194 448-650 5-201 (323)
96 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.1E-35 3.7E-40 314.3 16.6 196 449-655 40-236 (350)
97 1xjd_A Protein kinase C, theta 100.0 1.8E-35 6E-40 311.7 17.8 215 447-669 14-231 (345)
98 3vhe_A Vascular endothelial gr 100.0 4.5E-36 1.5E-40 319.4 13.2 204 441-651 13-289 (359)
99 3cok_A Serine/threonine-protei 100.0 1.2E-35 4.2E-40 304.2 16.0 200 449-655 10-210 (278)
100 1luf_A Muscle-specific tyrosin 100.0 1.1E-35 3.7E-40 314.3 16.0 201 444-651 41-270 (343)
101 1ob3_A PFPK5, cell division co 100.0 1.5E-35 5.2E-40 305.2 16.3 198 450-656 2-200 (288)
102 3a62_A Ribosomal protein S6 ki 100.0 1.8E-35 6.3E-40 310.2 17.0 200 448-655 15-219 (327)
103 3cbl_A C-FES, proto-oncogene t 100.0 5.2E-36 1.8E-40 320.7 13.1 196 446-650 110-308 (377)
104 3soc_A Activin receptor type-2 100.0 8.1E-36 2.8E-40 312.3 14.3 198 447-653 21-234 (322)
105 2ft3_A Biglycan; proteoglycan, 100.0 2.6E-34 9.1E-39 302.2 25.6 284 26-336 33-330 (332)
106 3ugc_A Tyrosine-protein kinase 100.0 1.1E-35 3.7E-40 307.4 14.7 193 449-651 9-211 (295)
107 2i0e_A Protein kinase C-beta I 100.0 2.7E-35 9.1E-40 311.3 17.9 201 448-656 18-220 (353)
108 4ejn_A RAC-alpha serine/threon 100.0 7.6E-36 2.6E-40 326.9 14.1 199 448-654 146-346 (446)
109 2owb_A Serine/threonine-protei 100.0 2.2E-35 7.6E-40 310.8 16.9 198 449-654 40-238 (335)
110 2y94_A 5'-AMP-activated protei 100.0 2.2E-35 7.5E-40 323.3 17.4 210 449-666 15-266 (476)
111 3fdn_A Serine/threonine-protei 100.0 1.8E-35 6E-40 303.2 15.6 198 448-655 7-205 (279)
112 2h34_A Serine/threonine-protei 100.0 6E-35 2.1E-39 303.9 19.8 220 448-675 32-298 (309)
113 3lb7_A RAF proto-oncogene seri 100.0 5.1E-35 1.7E-39 304.0 19.2 215 447-672 33-299 (307)
114 3ork_A Serine/threonine protei 100.0 9.1E-36 3.1E-40 310.4 13.6 199 448-654 10-216 (311)
115 3dtc_A Mitogen-activated prote 100.0 1.9E-35 6.4E-40 301.6 15.6 213 449-670 6-270 (271)
116 4aw2_A Serine/threonine-protei 100.0 1.2E-35 4E-40 322.1 14.8 219 441-666 65-291 (437)
117 3tt0_A Basic fibroblast growth 100.0 2.9E-35 1E-39 315.6 17.8 219 447-672 66-351 (382)
118 2rku_A Serine/threonine-protei 100.0 3.9E-35 1.3E-39 303.1 17.9 199 449-655 14-213 (294)
119 3gen_A Tyrosine-protein kinase 100.0 1.2E-35 3.9E-40 305.2 13.8 196 446-652 20-216 (283)
120 4f0f_A Serine/threonine-protei 100.0 1.2E-34 4E-39 298.3 21.1 191 449-649 18-220 (287)
121 3q4u_A Activin receptor type-1 100.0 2.8E-35 9.4E-40 305.2 16.5 192 448-653 6-219 (301)
122 1kob_A Twitchin; kinase, intra 100.0 7.7E-35 2.6E-39 311.6 20.3 190 449-649 50-242 (387)
123 1xku_A Decorin; proteoglycan, 100.0 4.5E-34 1.5E-38 300.2 25.5 280 25-312 30-329 (330)
124 3v8s_A RHO-associated protein 100.0 1E-35 3.5E-40 320.1 13.1 206 442-656 61-272 (410)
125 4euu_A Serine/threonine-protei 100.0 7.6E-35 2.6E-39 304.6 19.4 200 449-656 8-222 (319)
126 2eue_A Carbon catabolite derep 100.0 2.5E-35 8.4E-40 301.4 15.2 209 449-666 12-222 (275)
127 3qup_A Tyrosine-protein kinase 100.0 2.1E-35 7.1E-40 309.4 15.0 224 442-671 15-296 (323)
128 2wqm_A Serine/threonine-protei 100.0 1E-34 3.5E-39 302.3 19.9 219 449-672 31-296 (310)
129 3lxl_A Tyrosine-protein kinase 100.0 4.7E-35 1.6E-39 307.3 17.2 225 449-683 22-313 (327)
130 2ivs_A Proto-oncogene tyrosine 100.0 3E-35 1E-39 306.9 15.5 198 447-651 20-246 (314)
131 2vd5_A DMPK protein; serine/th 100.0 1.8E-35 6.2E-40 318.4 14.3 210 441-657 52-270 (412)
132 3uc3_A Serine/threonine-protei 100.0 4.7E-35 1.6E-39 311.2 17.2 190 448-649 18-210 (361)
133 2izr_A Casein kinase I isoform 100.0 4.2E-35 1.4E-39 308.1 16.7 209 449-670 8-278 (330)
134 3o0g_A Cell division protein k 100.0 2E-34 6.7E-39 297.5 21.2 197 450-655 2-201 (292)
135 4agu_A Cyclin-dependent kinase 100.0 9.3E-35 3.2E-39 302.8 18.8 197 449-654 2-200 (311)
136 4e5w_A Tyrosine-protein kinase 100.0 4.1E-35 1.4E-39 304.0 15.9 195 449-652 20-224 (302)
137 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-35 4E-40 316.7 11.9 217 449-672 70-344 (367)
138 3dls_A PAS domain-containing s 100.0 2.5E-35 8.6E-40 310.1 14.0 211 448-667 22-275 (335)
139 1csn_A Casein kinase-1; phosph 100.0 1.6E-34 5.6E-39 298.9 19.9 210 449-671 9-281 (298)
140 2w4o_A Calcium/calmodulin-depe 100.0 7.1E-35 2.4E-39 308.4 17.4 193 448-654 51-247 (349)
141 3kn6_A Ribosomal protein S6 ki 100.0 4.5E-35 1.5E-39 306.9 15.4 188 455-656 16-208 (325)
142 3kk8_A Calcium/calmodulin depe 100.0 2E-34 6.7E-39 296.2 19.9 197 448-654 4-204 (284)
143 1rjb_A FL cytokine receptor; k 100.0 2.8E-35 9.7E-40 311.3 14.0 198 445-649 40-266 (344)
144 2pmi_A Negative RE, cyclin-dep 100.0 6.2E-35 2.1E-39 304.9 16.4 201 448-656 3-208 (317)
145 2a19_B Interferon-induced, dou 100.0 5.1E-35 1.7E-39 300.4 15.3 213 448-674 9-275 (284)
146 1qcf_A Haematopoetic cell kina 100.0 1.9E-35 6.6E-40 324.2 12.8 217 445-672 183-443 (454)
147 2a2a_A Death-associated protei 100.0 1.7E-34 5.7E-39 302.3 19.3 195 448-651 10-212 (321)
148 4fvq_A Tyrosine-protein kinase 100.0 4.4E-35 1.5E-39 301.8 14.6 211 449-673 7-275 (289)
149 1u5q_A Serine/threonine protei 100.0 8.8E-35 3E-39 307.3 17.2 193 448-652 52-248 (348)
150 1k9a_A Carboxyl-terminal SRC k 100.0 7.9E-35 2.7E-39 318.8 17.4 191 446-651 189-380 (450)
151 3kfa_A Tyrosine-protein kinase 100.0 1.7E-35 5.8E-40 304.7 11.2 220 442-671 5-269 (288)
152 2eva_A TAK1 kinase - TAB1 chim 100.0 5.7E-35 1.9E-39 303.7 15.1 211 449-672 7-262 (307)
153 1mp8_A Focal adhesion kinase 1 100.0 3.6E-35 1.2E-39 301.2 13.4 196 446-651 11-211 (281)
154 1t46_A HOMO sapiens V-KIT hard 100.0 3.8E-35 1.3E-39 305.9 13.8 199 446-651 19-241 (313)
155 3t9t_A Tyrosine-protein kinase 100.0 3.3E-35 1.1E-39 299.0 12.7 194 448-652 6-200 (267)
156 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-34 5.2E-39 320.2 19.0 204 449-657 184-389 (543)
157 3a7i_A MST3 kinase, serine/thr 100.0 2.5E-34 8.7E-39 298.3 19.4 194 448-652 20-214 (303)
158 1opk_A P150, C-ABL, proto-onco 100.0 2.6E-35 8.9E-40 326.3 12.7 220 445-674 215-479 (495)
159 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.8E-34 6.3E-39 307.6 18.8 197 447-654 62-282 (365)
160 3gni_B Strad alpha; kinase fol 100.0 2.3E-34 7.9E-39 309.6 19.7 198 448-652 23-232 (389)
161 1jl5_A Outer protein YOPM; leu 100.0 3.8E-33 1.3E-37 305.1 29.6 306 38-391 92-419 (454)
162 1p4o_A Insulin-like growth fac 100.0 2.9E-35 9.9E-40 308.2 12.2 224 442-672 17-298 (322)
163 3kmu_A ILK, integrin-linked ki 100.0 1.2E-34 4.1E-39 295.4 16.5 212 449-671 9-268 (271)
164 3f3z_A Calcium/calmodulin-depe 100.0 3.2E-34 1.1E-38 293.5 19.1 208 448-668 7-219 (277)
165 2pvf_A Fibroblast growth facto 100.0 1.4E-34 4.7E-39 304.7 16.9 217 448-671 33-316 (334)
166 1jl5_A Outer protein YOPM; leu 100.0 3.5E-33 1.2E-37 305.4 28.5 311 37-392 111-438 (454)
167 1qpc_A LCK kinase; alpha beta 100.0 5.9E-35 2E-39 299.3 13.5 198 444-652 7-205 (279)
168 2qr7_A Ribosomal protein S6 ki 100.0 4.8E-35 1.6E-39 308.5 13.1 193 448-655 20-218 (342)
169 3hko_A Calcium/calmodulin-depe 100.0 1.1E-34 3.7E-39 306.9 15.8 205 445-654 21-273 (345)
170 3poz_A Epidermal growth factor 100.0 7.2E-35 2.5E-39 305.8 14.3 214 449-672 14-277 (327)
171 2acx_A G protein-coupled recep 100.0 2.3E-34 7.8E-39 319.4 18.9 203 448-657 182-385 (576)
172 2vgo_A Serine/threonine-protei 100.0 1.2E-34 4.3E-39 297.7 15.5 209 449-667 13-223 (284)
173 3f66_A Hepatocyte growth facto 100.0 2.3E-34 8E-39 297.8 17.5 214 449-671 24-289 (298)
174 3lxp_A Non-receptor tyrosine-p 100.0 3E-34 1E-38 299.8 18.4 189 450-649 30-229 (318)
175 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-34 4.8E-39 298.1 15.7 193 446-649 20-217 (289)
176 1x8b_A WEE1HU, WEE1-like prote 100.0 2.8E-34 9.4E-39 295.4 17.8 200 448-656 9-230 (289)
177 3kex_A Receptor tyrosine-prote 100.0 7.1E-35 2.4E-39 305.6 13.6 215 449-673 12-276 (325)
178 3rp9_A Mitogen-activated prote 100.0 2.1E-34 7.4E-39 316.7 17.8 194 449-652 52-279 (458)
179 3is5_A Calcium-dependent prote 100.0 2.4E-34 8.1E-39 295.8 16.9 197 449-654 21-222 (285)
180 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.8E-35 1.7E-39 320.7 12.5 217 445-672 179-439 (452)
181 2x4f_A Myosin light chain kina 100.0 1.9E-34 6.6E-39 307.6 16.8 191 453-654 92-285 (373)
182 3i6u_A CDS1, serine/threonine- 100.0 4.4E-34 1.5E-38 309.9 19.5 199 447-655 132-342 (419)
183 2h6d_A 5'-AMP-activated protei 100.0 2.6E-34 8.8E-39 293.9 16.7 211 449-667 10-222 (276)
184 3dbq_A Dual specificity protei 100.0 1.4E-34 5E-39 305.6 15.3 190 449-649 8-212 (343)
185 1nxk_A MAP kinase-activated pr 100.0 6.3E-34 2.1E-38 306.6 20.5 189 449-652 60-258 (400)
186 2yex_A Serine/threonine-protei 100.0 5.7E-34 1.9E-38 291.4 19.1 198 448-654 5-205 (276)
187 3n9x_A Phosphotransferase; mal 100.0 5.8E-34 2E-38 310.4 20.3 195 448-652 24-247 (432)
188 2w5a_A Serine/threonine-protei 100.0 4.7E-35 1.6E-39 299.9 10.8 200 449-654 5-213 (279)
189 2buj_A Serine/threonine-protei 100.0 5.5E-34 1.9E-38 297.7 19.1 223 448-678 27-311 (317)
190 1mqb_A Ephrin type-A receptor 100.0 2.9E-34 9.9E-39 301.9 16.8 219 449-676 43-312 (333)
191 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.6E-34 5.4E-39 303.5 14.8 200 447-656 31-237 (329)
192 3ttj_A Mitogen-activated prote 100.0 5E-34 1.7E-38 312.9 19.3 194 448-654 60-260 (464)
193 3bhy_A Death-associated protei 100.0 5E-34 1.7E-38 292.9 18.1 197 449-654 4-208 (283)
194 3mdy_A Bone morphogenetic prot 100.0 7.2E-34 2.5E-38 299.5 19.8 198 445-653 32-248 (337)
195 3op5_A Serine/threonine-protei 100.0 2E-34 7E-39 307.1 15.6 215 448-670 33-326 (364)
196 3llt_A Serine/threonine kinase 100.0 3.8E-34 1.3E-38 304.7 17.6 214 439-666 24-269 (360)
197 3pls_A Macrophage-stimulating 100.0 7.1E-34 2.4E-38 294.1 19.0 212 451-671 22-285 (298)
198 2zmd_A Dual specificity protei 100.0 4.2E-34 1.4E-38 307.1 17.8 189 450-649 56-259 (390)
199 4fcg_A Uncharacterized protein 100.0 1.2E-34 4.1E-39 303.7 13.2 277 3-315 27-314 (328)
200 2y7j_A Phosphorylase B kinase 100.0 7E-34 2.4E-38 302.7 19.3 204 444-656 88-304 (365)
201 2i1m_A Macrophage colony-stimu 100.0 8E-35 2.7E-39 306.4 11.7 200 444-650 40-259 (333)
202 3brb_A Proto-oncogene tyrosine 100.0 2.5E-34 8.7E-39 299.8 15.3 201 443-649 27-241 (313)
203 2clq_A Mitogen-activated prote 100.0 7.9E-34 2.7E-38 293.3 18.7 199 450-654 22-222 (295)
204 3com_A Serine/threonine-protei 100.0 7E-34 2.4E-38 296.5 18.5 191 447-649 26-217 (314)
205 2xir_A Vascular endothelial gr 100.0 2.1E-34 7.1E-39 300.7 14.3 204 441-651 18-244 (316)
206 1u59_A Tyrosine-protein kinase 100.0 4E-34 1.4E-38 294.4 16.2 195 448-652 7-208 (287)
207 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-34 9E-39 301.4 15.1 203 440-652 14-229 (326)
208 1xbb_A Tyrosine-protein kinase 100.0 2.9E-34 1E-38 296.0 15.1 196 445-650 11-213 (291)
209 3lzb_A Epidermal growth factor 100.0 2.4E-34 8.2E-39 301.7 14.6 216 449-674 14-279 (327)
210 3c1x_A Hepatocyte growth facto 100.0 1.8E-34 6.2E-39 307.7 13.8 213 450-671 89-353 (373)
211 3gxj_A TGF-beta receptor type- 100.0 2E-35 6.7E-40 306.5 6.1 189 449-651 2-212 (303)
212 3lm5_A Serine/threonine-protei 100.0 3.1E-34 1E-38 301.0 15.1 209 438-654 16-230 (327)
213 3g33_A Cell division protein k 100.0 4.2E-34 1.4E-38 297.4 15.9 202 448-657 7-219 (308)
214 1ua2_A CAK, cell division prot 100.0 3.8E-34 1.3E-38 302.8 15.7 202 446-655 6-211 (346)
215 4aaa_A Cyclin-dependent kinase 100.0 2.6E-34 8.8E-39 302.2 14.4 199 449-656 24-224 (331)
216 3nyv_A Calmodulin-domain prote 100.0 2.5E-34 8.4E-39 318.5 15.0 197 448-654 24-224 (484)
217 2jam_A Calcium/calmodulin-depe 100.0 1E-33 3.5E-38 293.9 18.5 189 448-649 7-199 (304)
218 3byv_A Rhoptry kinase; malaria 100.0 5E-35 1.7E-39 313.3 8.7 196 448-653 71-309 (377)
219 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-33 3.7E-38 314.7 19.7 192 448-649 34-239 (504)
220 3mwu_A Calmodulin-domain prote 100.0 6.7E-34 2.3E-38 315.0 18.0 191 448-649 20-214 (486)
221 1t4h_A Serine/threonine-protei 100.0 1.9E-33 6.4E-38 289.8 20.1 194 450-655 26-227 (290)
222 4eut_A Serine/threonine-protei 100.0 2.9E-34 1E-38 309.3 14.4 196 449-652 8-218 (396)
223 3ll6_A Cyclin G-associated kin 100.0 4.3E-34 1.5E-38 301.1 15.3 235 446-689 24-324 (337)
224 2v62_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 302.9 14.4 215 449-672 36-327 (345)
225 4hgt_A Casein kinase I isoform 100.0 1.4E-33 4.7E-38 291.6 18.6 211 448-671 7-278 (296)
226 3cc6_A Protein tyrosine kinase 100.0 2.7E-34 9.3E-39 294.7 12.5 194 448-651 10-208 (281)
227 1zy4_A Serine/threonine-protei 100.0 1.6E-33 5.5E-38 291.9 18.3 193 449-652 5-226 (303)
228 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-33 8.7E-38 289.6 19.7 210 448-670 7-277 (296)
229 1fvr_A Tyrosine-protein kinase 100.0 8.2E-34 2.8E-38 297.9 16.0 195 449-651 24-235 (327)
230 2h8h_A Proto-oncogene tyrosine 100.0 1.5E-34 5E-39 323.2 10.7 217 445-672 262-522 (535)
231 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-33 3.7E-38 323.7 18.1 214 448-669 339-555 (674)
232 3g2f_A Bone morphogenetic prot 100.0 5.2E-34 1.8E-38 300.5 14.3 193 448-651 11-229 (336)
233 3lij_A Calcium/calmodulin depe 100.0 1.2E-33 4.2E-38 313.4 17.9 190 449-649 36-229 (494)
234 2j7t_A Serine/threonine-protei 100.0 4.8E-34 1.6E-38 296.0 13.6 196 447-652 16-217 (302)
235 1byg_A CSK, protein (C-termina 100.0 3.4E-34 1.2E-38 293.5 12.3 190 448-652 19-209 (278)
236 1u46_A ACK-1, activated CDC42 100.0 3.1E-34 1E-38 295.8 11.4 196 449-652 17-219 (291)
237 3eqc_A Dual specificity mitoge 100.0 1.2E-33 4E-38 300.8 16.2 195 449-654 32-227 (360)
238 3pg1_A Mitogen-activated prote 100.0 2.7E-33 9.2E-38 298.3 18.8 206 441-655 13-232 (362)
239 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-33 4.5E-38 296.1 15.9 195 449-653 40-244 (326)
240 1cm8_A Phosphorylated MAP kina 100.0 2.1E-33 7.2E-38 299.1 17.7 193 449-655 24-224 (367)
241 2wtk_C Serine/threonine-protei 100.0 2.6E-33 8.9E-38 290.9 17.8 213 449-666 4-263 (305)
242 3oz6_A Mitogen-activated prote 100.0 2.4E-33 8.4E-38 301.4 18.2 199 447-656 6-230 (388)
243 2ozo_A Tyrosine-protein kinase 100.0 1.5E-33 5.2E-38 319.5 17.4 212 449-670 334-595 (613)
244 2yfx_A Tyrosine-protein kinase 100.0 7E-34 2.4E-38 298.4 13.4 217 448-671 28-302 (327)
245 1vzo_A Ribosomal protein S6 ki 100.0 3E-34 1E-38 304.5 10.6 201 449-655 53-260 (355)
246 2jii_A Serine/threonine-protei 100.0 7.6E-34 2.6E-38 301.3 13.7 207 449-670 41-333 (352)
247 1b6c_B TGF-B superfamily recep 100.0 3.6E-33 1.2E-37 294.9 18.5 194 446-653 38-253 (342)
248 1phk_A Phosphorylase kinase; g 100.0 2.9E-33 1E-37 289.5 17.3 199 448-655 15-227 (298)
249 2ac3_A MAP kinase-interacting 100.0 1.6E-33 5.6E-38 294.0 15.4 197 449-656 11-225 (316)
250 3mtl_A Cell division protein k 100.0 1E-33 3.6E-38 296.5 13.6 197 450-656 2-200 (324)
251 2r3i_A Cell division protein k 100.0 3E-33 1E-37 289.5 16.7 199 449-655 2-202 (299)
252 2ycf_A Serine/threonine-protei 100.0 3E-33 1E-37 292.9 16.1 193 448-650 8-212 (322)
253 3mi9_A Cell division protein k 100.0 5.7E-33 1.9E-37 294.5 18.2 199 449-656 16-228 (351)
254 2xrw_A Mitogen-activated prote 100.0 6.1E-33 2.1E-37 296.4 18.3 194 449-655 24-224 (371)
255 4fl3_A Tyrosine-protein kinase 100.0 2.1E-33 7.2E-38 319.1 15.5 186 456-651 375-566 (635)
256 2z80_A TOLL-like receptor 2, v 100.0 5.2E-33 1.8E-37 295.0 17.3 286 22-343 26-318 (353)
257 3fme_A Dual specificity mitoge 100.0 2.2E-33 7.4E-38 289.2 13.6 201 448-655 5-211 (290)
258 3q60_A ROP5B; pseudokinase, tr 100.0 1.7E-33 5.8E-38 300.8 13.2 194 449-654 61-290 (371)
259 2pml_X PFPK7, Ser/Thr protein 100.0 1.9E-33 6.6E-38 297.7 13.3 199 449-655 30-250 (348)
260 3sv0_A Casein kinase I-like; t 100.0 1E-32 3.4E-37 302.8 19.4 210 449-671 6-276 (483)
261 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.1E-33 3.9E-38 295.6 9.9 223 441-674 24-303 (319)
262 3kvw_A DYRK2, dual specificity 100.0 1.4E-32 4.7E-37 298.9 18.7 195 448-656 95-298 (429)
263 2vwi_A Serine/threonine-protei 100.0 1.4E-33 4.9E-38 292.5 10.0 202 447-655 12-225 (303)
264 3cek_A Dual specificity protei 100.0 5.5E-33 1.9E-37 289.6 14.1 203 441-654 19-236 (313)
265 2z66_A Variable lymphocyte rec 100.0 7.7E-33 2.6E-37 287.6 14.9 251 26-292 7-262 (306)
266 2fst_X Mitogen-activated prote 100.0 5E-33 1.7E-37 296.0 13.6 194 448-655 27-228 (367)
267 2wei_A Calmodulin-domain prote 100.0 1.3E-32 4.5E-37 283.0 16.2 212 447-669 19-235 (287)
268 3an0_A Dual specificity mitoge 100.0 1.3E-32 4.6E-37 290.2 15.2 201 447-655 48-255 (340)
269 2z80_A TOLL-like receptor 2, v 100.0 1.9E-32 6.4E-37 290.7 16.2 275 65-367 34-318 (353)
270 3fhr_A MAP kinase-activated pr 100.0 3.4E-32 1.1E-36 286.5 17.9 187 448-649 26-221 (336)
271 2b9h_A MAP kinase FUS3, mitoge 100.0 3.1E-32 1.1E-36 289.0 17.6 196 448-655 9-221 (353)
272 2j0j_A Focal adhesion kinase 1 100.0 9.7E-33 3.3E-37 314.8 14.6 197 445-651 385-586 (656)
273 2z66_A Variable lymphocyte rec 100.0 2.4E-32 8.2E-37 283.8 16.3 277 66-370 11-294 (306)
274 3nsz_A CK II alpha, casein kin 100.0 6.2E-32 2.1E-36 283.8 19.6 190 449-656 35-230 (330)
275 1z57_A Dual specificity protei 100.0 3.5E-32 1.2E-36 286.6 17.7 194 449-656 13-233 (339)
276 1blx_A Cyclin-dependent kinase 100.0 1.3E-32 4.6E-37 288.4 14.4 201 447-656 8-218 (326)
277 2iwi_A Serine/threonine-protei 100.0 6.4E-33 2.2E-37 289.0 11.8 213 446-667 27-284 (312)
278 3eb0_A Putative uncharacterize 100.0 3.7E-32 1.3E-36 291.7 17.6 197 446-656 3-241 (383)
279 1wak_A Serine/threonine-protei 100.0 2.5E-32 8.4E-37 294.5 16.0 196 449-657 36-293 (397)
280 3a99_A Proto-oncogene serine/t 100.0 3E-33 1E-37 292.6 8.1 195 446-649 39-241 (320)
281 3rgf_A Cyclin-dependent kinase 100.0 1.8E-32 6.2E-37 296.4 14.3 198 449-657 19-236 (405)
282 3qyz_A Mitogen-activated prote 100.0 9.4E-32 3.2E-36 286.5 19.3 196 447-654 24-229 (364)
283 4e7w_A Glycogen synthase kinas 100.0 2E-32 6.9E-37 294.5 13.9 195 449-656 39-241 (394)
284 3p23_A Serine/threonine-protei 100.0 2.7E-32 9.4E-37 296.3 13.8 191 448-652 22-224 (432)
285 3aln_A Dual specificity mitoge 100.0 7.5E-32 2.6E-36 282.9 16.3 199 448-654 20-226 (327)
286 3coi_A Mitogen-activated prote 100.0 1E-31 3.5E-36 285.0 16.8 191 449-654 23-221 (353)
287 4exu_A Mitogen-activated prote 100.0 1.4E-31 4.8E-36 285.8 17.8 192 449-655 41-240 (371)
288 1z7x_W Ribonuclease inhibitor; 100.0 6.5E-36 2.2E-40 329.3 -17.0 349 37-385 3-413 (461)
289 2eu9_A Dual specificity protei 100.0 2.1E-31 7E-36 282.7 17.7 194 449-656 18-238 (355)
290 1j1b_A Glycogen synthase kinas 100.0 5E-32 1.7E-36 293.9 13.0 195 449-657 53-257 (420)
291 3oja_A Leucine-rich immune mol 100.0 3.2E-34 1.1E-38 316.7 -4.5 239 82-358 30-270 (487)
292 2pzi_A Probable serine/threoni 100.0 1.2E-31 4.2E-36 308.7 16.5 183 449-649 79-268 (681)
293 2vuw_A Serine/threonine-protei 100.0 2E-32 7E-37 288.3 8.9 192 448-655 18-275 (336)
294 3e3p_A Protein kinase, putativ 100.0 3.1E-31 1.1E-35 282.1 17.9 203 443-656 16-231 (360)
295 2dyl_A Dual specificity mitoge 100.0 1.6E-31 5.3E-36 279.2 15.0 196 448-653 23-225 (318)
296 1ozn_A Reticulon 4 receptor; N 100.0 3.2E-31 1.1E-35 272.3 16.7 237 61-322 31-268 (285)
297 1q8y_A SR protein kinase; tran 100.0 1.8E-31 6.3E-36 285.3 15.1 195 449-656 18-234 (373)
298 4fcg_A Uncharacterized protein 100.0 1.2E-30 4.2E-35 273.2 20.3 234 85-338 80-313 (328)
299 2rio_A Serine/threonine-protei 100.0 2E-31 6.8E-36 290.4 14.6 193 450-654 15-237 (434)
300 1ozn_A Reticulon 4 receptor; N 100.0 2.8E-31 9.6E-36 272.8 14.8 224 65-315 14-238 (285)
301 3uqc_A Probable conserved tran 100.0 2E-30 6.8E-35 266.2 20.6 187 449-673 30-265 (286)
302 2i6l_A Mitogen-activated prote 100.0 5.8E-31 2E-35 275.0 16.7 195 449-656 10-224 (320)
303 3zyi_A Leucine-rich repeat-con 100.0 3.1E-30 1.1E-34 283.0 21.9 246 65-339 57-303 (452)
304 3zyj_A Leucine-rich repeat-con 100.0 4E-30 1.4E-34 281.1 22.6 106 62-167 64-169 (440)
305 3zyj_A Leucine-rich repeat-con 100.0 3.3E-30 1.1E-34 281.8 21.9 248 87-339 44-292 (440)
306 3zyi_A Leucine-rich repeat-con 100.0 3.4E-30 1.2E-34 282.7 21.2 254 87-369 55-309 (452)
307 3qa8_A MGC80376 protein; kinas 100.0 5.2E-31 1.8E-35 295.2 14.1 200 449-656 13-222 (676)
308 2vx3_A Dual specificity tyrosi 100.0 2E-30 6.9E-35 278.0 17.3 213 444-668 48-270 (382)
309 1z7x_W Ribonuclease inhibitor; 100.0 4E-34 1.4E-38 315.1 -13.0 329 37-365 28-413 (461)
310 1wwl_A Monocyte differentiatio 100.0 6.7E-32 2.3E-36 281.1 3.7 248 82-339 39-309 (312)
311 1wwl_A Monocyte differentiatio 100.0 6.7E-32 2.3E-36 281.1 3.5 250 105-364 38-310 (312)
312 3o53_A Protein LRIM1, AGAP0063 100.0 5.3E-32 1.8E-36 282.5 2.5 266 64-367 12-280 (317)
313 3m2w_A MAP kinase-activated pr 100.0 1.4E-29 4.9E-34 261.9 20.5 165 449-649 16-190 (299)
314 3o53_A Protein LRIM1, AGAP0063 100.0 5E-32 1.7E-36 282.7 2.0 267 38-319 11-280 (317)
315 3g06_A SSPH2 (leucine-rich rep 100.0 3E-29 1E-33 282.6 24.5 264 64-371 42-305 (622)
316 3dzo_A Rhoptry kinase domain; 100.0 1.7E-30 5.7E-35 281.2 10.6 192 448-649 76-309 (413)
317 3g06_A SSPH2 (leucine-rich rep 100.0 2.2E-29 7.4E-34 283.7 19.2 283 22-350 18-308 (622)
318 4azs_A Methyltransferase WBDD; 100.0 2.8E-30 9.4E-35 289.2 9.9 206 458-675 242-466 (569)
319 3oja_A Leucine-rich immune mol 100.0 2.1E-30 7.2E-35 286.1 6.8 219 59-291 31-250 (487)
320 2o6q_A Variable lymphocyte rec 100.0 2.7E-28 9.3E-33 248.3 19.0 218 23-268 2-219 (270)
321 2z62_A TOLL-like receptor 4, v 99.9 3.1E-27 1.1E-31 241.4 18.5 206 62-292 28-238 (276)
322 2z62_A TOLL-like receptor 4, v 99.9 4.4E-27 1.5E-31 240.2 17.1 227 67-342 12-240 (276)
323 3rfs_A Internalin B, repeat mo 99.9 2.2E-27 7.6E-32 241.8 9.7 138 205-349 108-245 (272)
324 2o6q_A Variable lymphocyte rec 99.9 1E-25 3.5E-30 229.2 21.7 202 87-291 17-218 (270)
325 3rfs_A Internalin B, repeat mo 99.9 1.6E-26 5.5E-31 235.4 14.3 187 202-393 59-245 (272)
326 3goz_A Leucine-rich repeat-con 99.9 6.9E-29 2.4E-33 264.0 -3.8 130 66-195 2-151 (362)
327 1p9a_G Platelet glycoprotein I 99.9 3E-25 1E-29 227.9 19.1 202 59-291 7-208 (290)
328 3goz_A Leucine-rich repeat-con 99.9 9.4E-28 3.2E-32 255.2 -0.0 223 42-265 3-264 (362)
329 3m19_A Variable lymphocyte rec 99.9 1.8E-25 6E-30 224.9 16.5 190 24-243 3-192 (251)
330 1p9a_G Platelet glycoprotein I 99.9 3.6E-25 1.2E-29 227.3 19.0 202 33-242 6-207 (290)
331 3ogk_B Coronatine-insensitive 99.9 1.8E-28 6.2E-33 278.7 -10.4 322 61-385 163-528 (592)
332 4glp_A Monocyte differentiatio 99.9 1.5E-25 5.1E-30 232.9 11.1 224 87-316 65-308 (310)
333 2xwt_C Thyrotropin receptor; s 99.9 6.9E-25 2.4E-29 218.8 15.3 178 87-291 32-218 (239)
334 2ast_B S-phase kinase-associat 99.9 2E-27 6.8E-32 250.1 -4.0 267 25-324 36-315 (336)
335 2xwt_C Thyrotropin receptor; s 99.9 9.2E-25 3.1E-29 218.0 15.1 197 62-288 31-236 (239)
336 2ca6_A RAN GTPase-activating p 99.9 1.9E-27 6.5E-32 255.3 -5.5 256 77-343 23-320 (386)
337 2ast_B S-phase kinase-associat 99.9 1.3E-26 4.4E-31 243.9 0.9 253 64-348 49-315 (336)
338 2ca6_A RAN GTPase-activating p 99.9 9.3E-28 3.2E-32 257.7 -8.0 247 101-367 23-320 (386)
339 4glp_A Monocyte differentiatio 99.9 3.4E-25 1.2E-29 230.2 11.6 225 110-340 64-308 (310)
340 3ogk_B Coronatine-insensitive 99.9 2.6E-28 8.8E-33 277.4 -15.1 299 84-385 162-503 (592)
341 3en9_A Glycoprotease, O-sialog 99.9 7.8E-26 2.7E-30 251.7 3.9 180 453-649 339-530 (540)
342 3m19_A Variable lymphocyte rec 99.9 1.5E-23 5.2E-28 210.7 18.4 183 182-367 14-196 (251)
343 2o6s_A Variable lymphocyte rec 99.9 1.5E-23 5E-28 204.5 16.6 185 25-231 6-190 (208)
344 4ay9_X Follicle-stimulating ho 99.9 3E-23 1E-27 219.3 19.2 239 66-335 13-255 (350)
345 1h6u_A Internalin H; cell adhe 99.9 1.2E-23 4.1E-28 218.1 14.5 192 84-291 39-230 (308)
346 1h6u_A Internalin H; cell adhe 99.9 1.6E-23 5.4E-28 217.2 15.1 195 58-268 37-231 (308)
347 4ay9_X Follicle-stimulating ho 99.9 2E-23 6.9E-28 220.6 16.0 224 61-289 29-257 (350)
348 2o6s_A Variable lymphocyte rec 99.9 3.4E-22 1.2E-26 194.8 15.9 157 207-370 29-185 (208)
349 3cvr_A Invasion plasmid antige 99.9 2.6E-22 9E-27 223.3 16.8 189 63-303 60-255 (571)
350 2p1m_B Transport inhibitor res 99.9 9.7E-26 3.3E-30 256.3 -12.5 342 38-383 106-519 (594)
351 1zar_A RIO2 kinase; serine kin 99.9 3.3E-22 1.1E-26 203.9 13.2 154 443-627 83-251 (282)
352 3cvr_A Invasion plasmid antige 99.9 2.5E-22 8.7E-27 223.4 13.0 189 111-351 60-255 (571)
353 2p1m_B Transport inhibitor res 99.9 8.8E-25 3E-29 248.3 -12.0 325 37-364 130-520 (594)
354 1m9s_A Internalin B; cell inva 99.8 1.4E-21 4.9E-26 219.8 10.2 188 64-267 23-210 (605)
355 1m9s_A Internalin B; cell inva 99.8 2.9E-21 1E-25 217.3 12.1 194 86-295 21-214 (605)
356 3e6j_A Variable lymphocyte rec 99.8 2E-20 6.8E-25 185.0 15.8 159 22-196 15-173 (229)
357 1h6t_A Internalin B; cell adhe 99.8 3.7E-21 1.3E-25 197.6 10.7 171 84-292 44-214 (291)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 1.3E-20 4.4E-25 185.1 13.5 156 210-368 15-171 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 2E-20 6.8E-25 183.7 14.4 155 210-367 15-169 (220)
360 2xot_A Amphoterin-induced prot 99.8 1.1E-20 3.9E-25 200.3 12.5 180 185-367 21-206 (361)
361 4b8c_D Glucose-repressible alc 99.8 9E-22 3.1E-26 227.0 3.8 258 2-292 131-405 (727)
362 1h6t_A Internalin B; cell adhe 99.8 1.3E-20 4.6E-25 193.4 11.7 173 58-244 42-214 (291)
363 1dce_A Protein (RAB geranylger 99.8 1.4E-22 4.8E-27 226.6 -3.4 217 107-357 346-567 (567)
364 2xot_A Amphoterin-induced prot 99.8 1.2E-20 4E-25 200.2 11.0 108 88-195 41-149 (361)
365 3e6j_A Variable lymphocyte rec 99.8 6.8E-20 2.3E-24 181.2 15.5 155 209-367 22-176 (229)
366 2v9t_B SLIT homolog 2 protein 99.8 5.1E-20 1.7E-24 180.8 14.4 134 62-195 32-165 (220)
367 1dce_A Protein (RAB geranylger 99.8 6.5E-23 2.2E-27 229.4 -7.8 218 82-333 345-567 (567)
368 2v70_A SLIT-2, SLIT homolog 2 99.8 6.1E-20 2.1E-24 180.2 13.9 133 63-195 33-166 (220)
369 4b8c_D Glucose-repressible alc 99.8 1.6E-20 5.4E-25 216.6 6.0 153 174-336 216-369 (727)
370 1xeu_A Internalin C; cellular 99.8 1E-20 3.5E-25 191.2 3.6 171 84-293 17-187 (263)
371 1zth_A RIO1 serine protein kin 99.8 1.5E-19 5.1E-24 182.0 10.6 140 451-605 48-219 (258)
372 1xeu_A Internalin C; cellular 99.8 4.4E-20 1.5E-24 186.5 5.7 171 60-269 17-187 (263)
373 4ezg_A Putative uncharacterize 99.8 7.5E-19 2.6E-23 169.4 12.4 152 205-363 43-194 (197)
374 4ezg_A Putative uncharacterize 99.8 7E-19 2.4E-23 169.6 12.2 156 177-340 39-195 (197)
375 1w8a_A SLIT protein; signaling 99.8 6.9E-19 2.3E-23 168.8 11.7 132 209-343 11-143 (192)
376 1w8a_A SLIT protein; signaling 99.8 1.6E-18 5.3E-23 166.3 11.5 130 185-317 11-141 (192)
377 3sb4_A Hypothetical leucine ri 99.7 2.3E-18 7.7E-23 180.2 9.2 101 229-331 225-326 (329)
378 3sb4_A Hypothetical leucine ri 99.7 2.6E-19 8.8E-24 187.4 1.4 283 61-357 24-328 (329)
379 4fdw_A Leucine rich hypothetic 99.7 1.9E-16 6.5E-21 169.3 20.4 270 61-362 112-382 (401)
380 4gyi_A RIO2 kinase; protein ki 99.7 8.7E-18 3E-22 175.5 7.4 142 450-605 95-265 (397)
381 2ell_A Acidic leucine-rich nuc 99.7 2.7E-17 9.2E-22 154.1 10.0 133 61-195 23-160 (168)
382 2o6r_A Variable lymphocyte rec 99.7 1.4E-16 4.7E-21 150.6 13.6 134 26-174 7-140 (177)
383 4fdw_A Leucine rich hypothetic 99.7 4.7E-16 1.6E-20 166.3 19.3 228 53-292 127-359 (401)
384 2ell_A Acidic leucine-rich nuc 99.7 6.6E-17 2.3E-21 151.4 10.5 132 158-291 24-160 (168)
385 2o6r_A Variable lymphocyte rec 99.7 2.2E-16 7.6E-21 149.2 13.3 133 232-367 9-141 (177)
386 2wfh_A SLIT homolog 2 protein 99.7 1.7E-16 5.9E-21 152.0 12.5 132 233-368 13-144 (193)
387 2je0_A Acidic leucine-rich nuc 99.7 3.7E-17 1.3E-21 149.8 7.4 128 61-190 16-148 (149)
388 2je0_A Acidic leucine-rich nuc 99.7 6.4E-17 2.2E-21 148.2 8.1 127 230-358 17-148 (149)
389 2wfh_A SLIT homolog 2 protein 99.7 2.5E-16 8.4E-21 151.0 12.3 108 62-170 31-138 (193)
390 1ds9_A Outer arm dynein; leuci 99.6 1.3E-17 4.4E-22 160.8 -4.3 153 132-291 16-185 (198)
391 1ds9_A Outer arm dynein; leuci 99.6 7.9E-18 2.7E-22 162.3 -6.9 133 84-221 16-155 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.6 1.8E-15 6.2E-20 142.7 8.7 132 226-363 15-153 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.6 2.5E-15 8.4E-20 141.8 7.9 109 58-171 15-126 (176)
394 4fs7_A Uncharacterized protein 99.5 1.4E-13 4.7E-18 147.6 18.8 295 52-360 61-376 (394)
395 4fs7_A Uncharacterized protein 99.5 1.9E-13 6.6E-18 146.4 19.9 301 38-355 72-393 (394)
396 3g39_A Variable lymphocyte rec 99.5 4.1E-14 1.4E-18 132.4 11.3 105 232-339 11-115 (170)
397 3g39_A Variable lymphocyte rec 99.5 5.4E-14 1.8E-18 131.6 12.0 105 66-173 13-117 (170)
398 2r9u_A Variable lymphocyte rec 99.5 9.9E-14 3.4E-18 130.3 12.0 104 66-172 16-119 (174)
399 2r9u_A Variable lymphocyte rec 99.5 1.4E-13 4.6E-18 129.4 11.4 104 233-339 15-118 (174)
400 4gt6_A Cell surface protein; l 99.4 6.3E-12 2.1E-16 134.6 18.4 299 52-362 53-369 (394)
401 3un9_A NLR family member X1; l 99.4 4.5E-15 1.5E-19 157.1 -8.1 38 110-147 72-114 (372)
402 2ifg_A High affinity nerve gro 99.4 1.3E-12 4.3E-17 137.5 10.2 108 26-147 8-116 (347)
403 3un9_A NLR family member X1; l 99.4 4E-15 1.4E-19 157.5 -9.5 65 85-149 71-141 (372)
404 2ifg_A High affinity nerve gro 99.3 1.6E-12 5.6E-17 136.6 9.5 131 235-368 13-146 (347)
405 3tm0_A Aminoglycoside 3'-phosp 99.3 2.5E-12 8.7E-17 129.5 10.2 148 445-604 9-213 (263)
406 4gt6_A Cell surface protein; l 99.3 6.8E-11 2.3E-15 126.5 20.1 279 74-363 51-346 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.2 2.3E-11 7.7E-16 122.2 8.8 140 448-604 18-214 (264)
408 4h09_A Hypothetical leucine ri 99.1 4.2E-09 1.4E-13 111.9 21.3 285 62-359 46-342 (379)
409 3dxp_A Putative acyl-COA dehyd 99.1 1.8E-10 6.2E-15 121.5 9.4 144 453-604 41-248 (359)
410 4h09_A Hypothetical leucine ri 99.1 3.8E-09 1.3E-13 112.2 18.9 285 38-336 47-343 (379)
411 2ra8_A Uncharacterized protein 99.1 1.7E-11 5.6E-16 128.6 0.4 84 228-313 250-341 (362)
412 2ra8_A Uncharacterized protein 99.0 4.1E-11 1.4E-15 125.7 1.0 162 177-361 167-341 (362)
413 3rw6_A Nuclear RNA export fact 98.9 5.3E-12 1.8E-16 125.6 -10.7 92 82-175 137-237 (267)
414 3r70_A Aminoglycoside phosphot 98.7 3.8E-08 1.3E-12 101.8 11.1 137 451-605 38-238 (320)
415 3sg8_A APH(2'')-ID; antibiotic 98.6 5E-08 1.7E-12 100.1 8.9 137 455-605 25-224 (304)
416 3tdw_A Gentamicin resistance p 98.5 5.7E-07 1.9E-11 92.2 13.8 138 454-605 23-225 (306)
417 3rw6_A Nuclear RNA export fact 98.5 5.4E-09 1.8E-13 103.9 -1.7 139 24-164 76-257 (267)
418 4gkh_A Aminoglycoside 3'-phosp 98.5 3.9E-07 1.3E-11 91.7 11.6 136 456-604 30-223 (272)
419 1io0_A Tropomodulin; LRR prote 98.5 1.6E-08 5.5E-13 95.5 0.3 89 59-147 33-136 (185)
420 3d1u_A Putative fructosamine-3 98.5 5.2E-07 1.8E-11 91.4 11.4 77 453-536 18-97 (288)
421 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5E-13 95.8 -0.5 119 77-195 27-164 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.1E-06 3.8E-11 92.2 11.6 77 452-537 43-122 (362)
423 3ats_A Putative uncharacterize 98.2 1.1E-06 3.7E-11 92.3 6.1 80 455-537 25-121 (357)
424 2q83_A YTAA protein; 2635576, 98.1 6E-06 2.1E-10 85.9 9.1 141 456-604 38-252 (346)
425 2olc_A MTR kinase, methylthior 98.1 6.1E-06 2.1E-10 87.9 8.2 79 454-534 34-120 (397)
426 3jr1_A Putative fructosamine-3 98.0 3.2E-05 1.1E-09 78.9 11.6 139 454-600 40-232 (312)
427 3e4g_A ATP synthase subunit S, 97.9 2.5E-06 8.6E-11 78.5 1.6 82 87-168 62-149 (176)
428 3e4g_A ATP synthase subunit S, 97.8 3.6E-06 1.2E-10 77.5 1.2 83 110-192 61-149 (176)
429 2pyw_A Uncharacterized protein 97.8 6.2E-05 2.1E-09 80.7 10.2 77 454-533 38-122 (420)
430 3f7w_A Putative fructosamine-3 97.7 9.5E-05 3.3E-09 74.8 10.0 78 451-535 16-96 (288)
431 3csv_A Aminoglycoside phosphot 97.5 0.00021 7E-09 73.9 9.2 142 455-604 23-217 (333)
432 1zyl_A Hypothetical protein YI 97.5 0.0007 2.4E-08 69.6 13.2 143 455-604 31-223 (328)
433 2ppq_A HSK, HK, homoserine kin 97.5 0.0011 3.7E-08 68.0 14.5 159 440-604 7-217 (322)
434 1pgv_A TMD-1, tropomodulin TMD 97.4 1.9E-05 6.4E-10 74.1 -1.0 13 325-337 156-168 (197)
435 3dxq_A Choline/ethanolamine ki 97.4 0.00045 1.5E-08 70.2 9.2 141 452-604 20-202 (301)
436 1nw1_A Choline kinase (49.2 KD 97.4 0.00024 8.1E-09 76.2 7.3 73 454-535 77-158 (429)
437 1pgv_A TMD-1, tropomodulin TMD 97.3 3.1E-05 1.1E-09 72.6 0.2 63 61-123 40-111 (197)
438 3feg_A Choline/ethanolamine ki 97.3 0.00036 1.2E-08 73.1 7.6 142 455-604 55-254 (379)
439 2qg7_A Ethanolamine kinase PV0 97.2 0.001 3.4E-08 71.6 9.9 75 454-536 112-188 (458)
440 3rfe_A Platelet glycoprotein I 97.0 0.00098 3.3E-08 58.2 6.6 60 306-367 12-72 (130)
441 3i1a_A Spectinomycin phosphotr 97.0 0.0015 5E-08 67.7 8.4 31 574-604 206-236 (339)
442 3rfe_A Platelet glycoprotein I 96.9 0.0014 4.7E-08 57.3 6.2 56 66-123 12-68 (130)
443 3c5i_A Choline kinase; choline 96.9 0.00064 2.2E-08 71.3 4.7 73 455-535 38-120 (369)
444 3f2s_A CK, chetk-alpha, cholin 96.4 0.0052 1.8E-07 64.5 7.6 146 455-604 57-280 (401)
445 3mes_A Choline kinase; malaria 96.0 0.011 3.6E-07 62.8 7.4 141 455-604 75-291 (424)
446 2yle_A Protein spire homolog 1 94.7 0.24 8.4E-06 46.5 11.1 95 535-649 34-128 (229)
447 3g15_A CK, chetk-alpha, cholin 94.1 0.13 4.3E-06 54.3 9.0 30 575-604 245-280 (401)
448 4ann_A ESSB; membrane protein, 86.4 0.94 3.2E-05 42.5 5.7 84 507-603 43-127 (215)
449 4ano_A ESSB; membrane protein, 86.1 1.6 5.5E-05 41.0 7.2 83 507-602 48-131 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 73.7 0.3 1E-05 52.4 -2.8 63 453-519 145-214 (463)
451 3ls8_A Phosphatidylinositol 3- 50.4 1.5E+02 0.0053 32.2 13.0 45 551-602 454-500 (614)
452 2x6h_A GH13170P, VPS34, phosph 47.6 1.7E+02 0.0058 32.5 13.0 45 552-603 529-575 (696)
453 2vx3_A Dual specificity tyrosi 44.5 11 0.00039 38.6 3.0 26 641-666 347-372 (382)
454 2lz0_A Uncharacterized protein 44.0 40 0.0014 27.0 5.6 38 104-142 14-51 (100)
455 3nsz_A CK II alpha, casein kin 39.2 11 0.00037 37.6 1.8 24 643-666 296-319 (330)
456 3o0g_A Cell division protein k 39.1 11 0.00038 36.8 1.8 24 643-666 259-282 (292)
457 2lz0_A Uncharacterized protein 38.0 59 0.002 26.0 5.7 44 75-119 9-52 (100)
458 2i6l_A Mitogen-activated prote 37.5 12 0.00041 36.9 1.8 24 643-666 282-305 (320)
459 3mi9_A Cell division protein k 33.7 12 0.0004 37.9 1.0 25 643-667 288-312 (351)
460 4exu_A Mitogen-activated prote 33.7 20 0.00069 36.5 2.8 25 643-667 300-324 (371)
461 3qyz_A Mitogen-activated prote 33.2 21 0.0007 36.3 2.8 25 643-667 290-314 (364)
462 1cja_A Protein (actin-fragmin 33.1 1.1E+02 0.0037 30.6 7.7 140 452-604 71-237 (342)
463 3mtl_A Cell division protein k 32.2 14 0.00049 36.8 1.3 24 643-666 258-281 (324)
464 3e3p_A Protein kinase, putativ 31.2 15 0.00051 37.1 1.3 25 643-667 291-315 (360)
465 3rgf_A Cyclin-dependent kinase 27.8 22 0.00074 36.8 1.8 24 644-667 311-334 (405)
466 3hhm_A Phosphatidylinositol-4, 27.6 2E+02 0.007 33.6 9.9 46 550-602 912-960 (1091)
467 2rio_A Serine/threonine-protei 27.1 22 0.00077 37.1 1.8 24 643-666 272-295 (434)
468 4f9c_A Cell division cycle 7-r 25.6 28 0.00095 35.5 2.1 22 645-666 331-352 (361)
469 4b99_A Mitogen-activated prote 23.4 27 0.00093 36.1 1.6 23 645-667 323-345 (398)
470 3eb0_A Putative uncharacterize 23.1 30 0.001 35.3 1.8 24 643-666 298-321 (383)
471 3oz6_A Mitogen-activated prote 22.0 28 0.00095 35.6 1.3 25 643-667 305-329 (388)
472 4e7w_A Glycogen synthase kinas 21.2 34 0.0012 35.1 1.8 25 643-667 298-322 (394)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-51 Score=482.91 Aligned_cols=383 Identities=36% Similarity=0.545 Sum_probs=240.3
Q ss_pred HHHHHHHhcCCCCcCCCC-------C-CCCCCCCcceeEeCCCCCEEEEEecccccccc---cCC---------------
Q 041034 2 EIERQALLNCGWWKDRIP-------H-NTSDHCNWVGITCDYKGSITHIELVECSIKGE---LGS--------------- 55 (701)
Q Consensus 2 ~~~~~~l~~~~~~~~~~~-------~-~~~d~c~w~gv~c~~~~~v~~l~l~~~~~~~~---~~~--------------- 55 (701)
++||+|||+ ||+.+. | .++|||+|.||+|+ .++|+.|+|+++.+.|. +++
T Consensus 11 ~~~~~all~---~k~~~~~~~~l~~W~~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~ 86 (768)
T 3rgz_A 11 YREIHQLIS---FKDVLPDKNLLPDWSSNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86 (768)
T ss_dssp HHHHHHHHH---HHTTCSCTTSSTTCCTTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTT
T ss_pred HHHHHHHHH---HHhhCCCcccccCCCCCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcC
Confidence 689999998 555432 1 36799999999999 79999999999988876 332
Q ss_pred -------cccCCCCCCcEEECCCCcceeeCCc--ccCCCCCCCEEECcCCcCcccCCccc-CCCCCCCEEECCCCCCCCC
Q 041034 56 -------LNFSCFPNLQYLNLWNNNLSGSIPP--QIGSLSNLKYLNLRWNNLTGTIPKEI-GSLRNLEVLYLSNNSLHGT 125 (701)
Q Consensus 56 -------~~~~~~~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~ 125 (701)
..|..+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|++|++++.
T Consensus 87 ~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 166 (768)
T 3rgz_A 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166 (768)
T ss_dssp SCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEE
T ss_pred CCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCc
Confidence 3578889999999999999998888 88888888888888888877766554 4455555555555544433
Q ss_pred -------------------------------------------------CccccCCccccceeecccccCCCCCcccccC
Q 041034 126 -------------------------------------------------TPIEIGSLRNLEELYLRSNKLSGVLPQEIGN 156 (701)
Q Consensus 126 -------------------------------------------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 156 (701)
+|. ++.+++|++|+|++|++++..|..|++
T Consensus 167 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~ 245 (768)
T 3rgz_A 167 NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAIST 245 (768)
T ss_dssp THHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTT
T ss_pred CChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhc
Confidence 332 444444444444444444444444444
Q ss_pred CCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCc-cccCccccccccccCCccccccCCCcccEE
Q 041034 157 LKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNL-KNLTHLSIITNKLTGAIPSTLGHLTSLLYL 235 (701)
Q Consensus 157 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 235 (701)
+++|++|++++|.+.+.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|++++.+|..|+.+++|++|
T Consensus 246 l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 323 (768)
T 3rgz_A 246 CTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESL 323 (768)
T ss_dssp CSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEE
Confidence 444444444444444433332 33444444444455555566666554 777777777777777777777777777777
Q ss_pred EeccCCCCCCCCcc-cCCCCcccEEEcCCCCCccccCcccCCCC-C--------------------------CcEEEccC
Q 041034 236 DLSFNQLHSFIPLE-IGNFSALAELDLSDNKIRGIIPDELSKLS-N--------------------------LQYLNLSS 287 (701)
Q Consensus 236 ~L~~N~l~~~~~~~-~~~~~~L~~L~L~~N~l~~~~p~~l~~l~-~--------------------------L~~L~L~~ 287 (701)
+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+..++ + |+.|++++
T Consensus 324 ~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~ 403 (768)
T 3rgz_A 324 ALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403 (768)
T ss_dssp ECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCS
T ss_pred ECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCC
Confidence 77777777666654 66666666666666666666665554443 3 44444444
Q ss_pred ccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCC
Q 041034 288 NLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 288 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 367 (701)
|.+++.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|+|++|++++.+|..++.+++|+.|++++|+++|.+|
T Consensus 404 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 483 (768)
T 3rgz_A 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 483 (768)
T ss_dssp SEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred CccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCC
Confidence 44444455555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCccc----cccccccCCCCCcCCCcCC
Q 041034 368 MTLHP----MFLDMSFNNLEGEIPTYLR 391 (701)
Q Consensus 368 ~~~~~----~~l~ls~N~l~g~~p~~~~ 391 (701)
..+.. .+|++++|+++|.+|.++.
T Consensus 484 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 511 (768)
T 3rgz_A 484 SGLSNCTNLNWISLSNNRLTGEIPKWIG 511 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred HHHhcCCCCCEEEccCCccCCcCChHHh
Confidence 54432 2455555555555555443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-51 Score=480.44 Aligned_cols=372 Identities=39% Similarity=0.579 Sum_probs=309.7
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcc-cCCCCCCCEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKE-IGSLRNLEVL 115 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L 115 (701)
..++.|++.+|.++|.++...+..+++|++|+|++|.+++.+|..|+.+++|++|+|++|.++|.+|.. |.++++|++|
T Consensus 269 ~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L 348 (768)
T 3rgz_A 269 KSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVL 348 (768)
T ss_dssp TTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEE
T ss_pred CCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEE
Confidence 356666666666666655544444466666666666666666666666666666666666666555544 5566666666
Q ss_pred ECCCCCCCCCCccccC-------------------------C--ccccceeecccccCCCCCcccccCCCCCcEEEceec
Q 041034 116 YLSNNSLHGTTPIEIG-------------------------S--LRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYN 168 (701)
Q Consensus 116 ~Ls~N~l~~~~~~~~~-------------------------~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 168 (701)
+|++|++++.+|..+. . +++|++|+|++|++++.+|..++++++|+.|++++|
T Consensus 349 ~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 428 (768)
T 3rgz_A 349 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428 (768)
T ss_dssp ECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSS
T ss_pred eCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCC
Confidence 6666655554444433 3 556777777777777788888999999999999999
Q ss_pred ccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCc
Q 041034 169 TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPL 248 (701)
Q Consensus 169 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 248 (701)
.+++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++++.+|..+..+++|++|+|++|++++.+|.
T Consensus 429 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 508 (768)
T 3rgz_A 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508 (768)
T ss_dssp EEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred cccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCccccc-----------------------------
Q 041034 249 EIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIG----------------------------- 299 (701)
Q Consensus 249 ~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~----------------------------- 299 (701)
+++.+++|+.|+|++|+++|.+|..++.+++|+.|++++|.++|.+|..+.
T Consensus 509 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (768)
T 3rgz_A 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 588 (768)
T ss_dssp GGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCC
T ss_pred HHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999988776442
Q ss_pred -----------------------------------------CccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCcc
Q 041034 300 -----------------------------------------KLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSL 338 (701)
Q Consensus 300 -----------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 338 (701)
.+++|+.|||++|+++|.+|..+++++.|+.|+|++|++
T Consensus 589 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l 668 (768)
T 3rgz_A 589 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDI 668 (768)
T ss_dssp SSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCC
T ss_pred ccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCcc
Confidence 356789999999999999999999999999999999999
Q ss_pred CCCCCccccccccCCeEEcccccCcccCCCCccc----cccccccCCCCCcCCCcC--CCCCCCCcCCCcccccce
Q 041034 339 DGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP----MFLDMSFNNLEGEIPTYL--RDNPPNSFVGNKGLCGHV 408 (701)
Q Consensus 339 ~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls~N~l~g~~p~~~--~~~~~~~~~~~~~~~~~~ 408 (701)
+|.+|..++.+++|+.|||++|+++|.+|..+.. .++|+|+|+++|.||... ...+..+|.||+++||.+
T Consensus 669 ~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 669 SGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 9999999999999999999999999999988764 479999999999999764 356677899999999976
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-49 Score=455.42 Aligned_cols=380 Identities=21% Similarity=0.294 Sum_probs=302.9
Q ss_pred HHHHHHHhc------CCCCcC---------CCCCCCCCCCCc---ceeEeCCCCCEEEEEecccccccccCCcccCCCCC
Q 041034 2 EIERQALLN------CGWWKD---------RIPHNTSDHCNW---VGITCDYKGSITHIELVECSIKGELGSLNFSCFPN 63 (701)
Q Consensus 2 ~~~~~~l~~------~~~~~~---------~~~~~~~d~c~w---~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~ 63 (701)
.+||+||.+ +..|+. .|.. ++|||.| .||+|+..++|+.|+|++++++|.+++ .++.+++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~-~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPD-AIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECG-GGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCCh-HHhcCcc
Confidence 368999975 234551 3543 5799999 999999889999999999999999985 7899999
Q ss_pred CcEEECCCC-----------------------------------------------------------------------
Q 041034 64 LQYLNLWNN----------------------------------------------------------------------- 72 (701)
Q Consensus 64 L~~L~L~~n----------------------------------------------------------------------- 72 (701)
|++|+|++|
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 999999988
Q ss_pred -------cceeeCCcccCCCCCCCEEECcCCcCccc-----------------CCcccC--CCCCCCEEECCCCCCCCCC
Q 041034 73 -------NLSGSIPPQIGSLSNLKYLNLRWNNLTGT-----------------IPKEIG--SLRNLEVLYLSNNSLHGTT 126 (701)
Q Consensus 73 -------~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l~~~~ 126 (701)
+++| +|+.|+++++|++|+|++|.+++. +|+.++ ++++|++|+|++|++.+.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 4556 888999999999999999999986 899999 9999999999999999999
Q ss_pred ccccCCccccceeeccccc-CCC-CCcccccCC------CCCcEEEceecccCCCcCc--ccccccccceeEeeecccCC
Q 041034 127 PIEIGSLRNLEELYLRSNK-LSG-VLPQEIGNL------KSLIWLSVMYNTVGGPIPS--TLFRLTNLERLFLGCNQFNG 196 (701)
Q Consensus 127 ~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~ 196 (701)
|..|+++++|++|+|++|+ +++ .+|..++.+ ++|++|++++|.++ .+|. .+.++++|++|+|++|+++|
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g 344 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEG 344 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEE
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCcc
Confidence 9999999999999999998 998 888888876 89999999999998 7787 89999999999999999998
Q ss_pred CCCCCCCCccccCccccccccccCCccccccCCCc-ccEEEeccCCCCCCCCcccCCCC--cccEEEcCCCCCccccCcc
Q 041034 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTS-LLYLDLSFNQLHSFIPLEIGNFS--ALAELDLSDNKIRGIIPDE 273 (701)
Q Consensus 197 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~~~--~L~~L~L~~N~l~~~~p~~ 273 (701)
.+| .++.+++|++|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|++++|++++.+|..
T Consensus 345 ~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 421 (636)
T 4eco_A 345 KLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKN 421 (636)
T ss_dssp ECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCS
T ss_pred chh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhh
Confidence 888 8888889999999999888 77888888888 888888888888 4777776644 7888888888888888877
Q ss_pred cC-------CCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCC--------CCCCeeeccCCcc
Q 041034 274 LS-------KLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNC--------TELQHLALNHNSL 338 (701)
Q Consensus 274 l~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~L~~N~l 338 (701)
+. .+++|+.|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|++
T Consensus 422 l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 422 FDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp SCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred hcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcC
Confidence 77 6777888888888887433334445677777777777776 455433221 2667777777777
Q ss_pred CCCCCcccc--ccccCCeEEcccccCcccCCCCccc----ccccc------ccCCCCCcCCCcCC
Q 041034 339 DGTIPPEIG--KILLLQNLDLSHNNLSGTIPMTLHP----MFLDM------SFNNLEGEIPTYLR 391 (701)
Q Consensus 339 ~~~~p~~~~--~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~l------s~N~l~g~~p~~~~ 391 (701)
+ .+|..+. .+++|+.|+|++|++++ +|..+.. ..|++ ++|++.+.+|..+.
T Consensus 501 ~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~ 563 (636)
T 4eco_A 501 T-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGIT 563 (636)
T ss_dssp C-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGG
T ss_pred C-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHh
Confidence 6 5666665 66677777777777766 6655432 24555 45666666665543
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.8e-48 Score=448.11 Aligned_cols=358 Identities=23% Similarity=0.289 Sum_probs=269.8
Q ss_pred HHHHHHHhc------CCCCcCCCCCCCCCC--CCc------------ceeEeCCCCCEEEEEecccccccccCCcccCCC
Q 041034 2 EIERQALLN------CGWWKDRIPHNTSDH--CNW------------VGITCDYKGSITHIELVECSIKGELGSLNFSCF 61 (701)
Q Consensus 2 ~~~~~~l~~------~~~~~~~~~~~~~d~--c~w------------~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~ 61 (701)
.+|++||++ +..|+....+...++ |+| .||+|+..++|+.|+|+++++.|.+++ .++.+
T Consensus 268 ~~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~-~l~~L 346 (876)
T 4ecn_A 268 IKDYKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD-AIGQL 346 (876)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG-GGGGC
T ss_pred hHHHHHHHHHHHHcCCCCCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch-HHhcc
Confidence 479999986 123332211111344 999 999999889999999999999999985 68999
Q ss_pred CCCcEEEC-CCCcceee---------------------------------------------------------------
Q 041034 62 PNLQYLNL-WNNNLSGS--------------------------------------------------------------- 77 (701)
Q Consensus 62 ~~L~~L~L-~~n~l~~~--------------------------------------------------------------- 77 (701)
++|+.|+| ++|.++|.
T Consensus 347 ~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~ 426 (876)
T 4ecn_A 347 TELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLK 426 (876)
T ss_dssp TTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCC
T ss_pred ccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccccchh
Confidence 99999999 77755443
Q ss_pred -------------CCcccCCCCCCCEEECcCCcCcc-----------------cCCcccC--CCCCCCEEECCCCCCCCC
Q 041034 78 -------------IPPQIGSLSNLKYLNLRWNNLTG-----------------TIPKEIG--SLRNLEVLYLSNNSLHGT 125 (701)
Q Consensus 78 -------------~~~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~Ls~N~l~~~ 125 (701)
+|..|+++++|++|+|++|+|++ .+|+.++ ++++|++|+|++|++.+.
T Consensus 427 ~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~ 506 (876)
T 4ecn_A 427 DTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQ 506 (876)
T ss_dssp TTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCS
T ss_pred hceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCcc
Confidence 78889999999999999999998 3888887 999999999999999999
Q ss_pred CccccCCccccceeeccccc-CCC-CCcccccCCC-------CCcEEEceecccCCCcCc--ccccccccceeEeeeccc
Q 041034 126 TPIEIGSLRNLEELYLRSNK-LSG-VLPQEIGNLK-------SLIWLSVMYNTVGGPIPS--TLFRLTNLERLFLGCNQF 194 (701)
Q Consensus 126 ~~~~~~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l 194 (701)
+|..|+++++|++|+|++|+ +++ .+|..+++++ +|+.|+|++|.++ .+|. .+.++++|+.|+|++|++
T Consensus 507 iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l 585 (876)
T 4ecn_A 507 LPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKV 585 (876)
T ss_dssp CCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCC
T ss_pred ChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCc
Confidence 99999999999999999998 998 7888776665 9999999999998 7888 899999999999999999
Q ss_pred CCCCCCCCCCccccCccccccccccCCccccccCCCc-ccEEEeccCCCCCCCCcccCCCCc--ccEEEcCCCCCccccC
Q 041034 195 NGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTS-LLYLDLSFNQLHSFIPLEIGNFSA--LAELDLSDNKIRGIIP 271 (701)
Q Consensus 195 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~--L~~L~L~~N~l~~~~p 271 (701)
+ .+| .++.+++|+.|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..++. |+.|+|++|++++.+|
T Consensus 586 ~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip 661 (876)
T 4ecn_A 586 R-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGR 661 (876)
T ss_dssp C-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSS
T ss_pred c-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccc
Confidence 8 777 8999999999999999999 78888999998 999999999998 47777766543 8888888888877655
Q ss_pred ccc---C--CCCCCcEEEccCccCCCCCcccc-cCccceeeecCCCCcCCCCCCCcccCC--------CCCCeeeccCCc
Q 041034 272 DEL---S--KLSNLQYLNLSSNLLSGQIPFAI-GKLFNLVSLDLSKNKLSGSFPTGIGNC--------TELQHLALNHNS 337 (701)
Q Consensus 272 ~~l---~--~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~L~~N~ 337 (701)
... . .+++|+.|+|++|.++ .+|..+ ..+++|+.|+|++|+++ .+|..+... ++|+.|+|++|+
T Consensus 662 ~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~ 739 (876)
T 4ecn_A 662 NISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNK 739 (876)
T ss_dssp SCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSC
T ss_pred cchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCC
Confidence 322 1 2235566666666665 333322 24555555555555555 344333221 145555555555
Q ss_pred cCCCCCcccc--ccccCCeEEcccccCcccCCCC
Q 041034 338 LDGTIPPEIG--KILLLQNLDLSHNNLSGTIPMT 369 (701)
Q Consensus 338 l~~~~p~~~~--~l~~L~~l~ls~N~l~g~~p~~ 369 (701)
|+ .+|..+. .+++|+.|+|++|++++ +|..
T Consensus 740 L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~ 771 (876)
T 4ecn_A 740 LT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQ 771 (876)
T ss_dssp CC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCG
T ss_pred Cc-cchHHhhhccCCCcCEEEeCCCCCCc-cchh
Confidence 55 4454444 45555555555555554 4433
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.3e-46 Score=391.30 Aligned_cols=194 Identities=26% Similarity=0.383 Sum_probs=166.5
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++++.||+|+||+||+|+. .+|+.||||++...... ....+.+.+|++++++++|||||++++++.+++.+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 47899999999999999999965 57999999999876543 34467899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
||||+||+|.+++..... ..+++..++.|+.||+.||+|||++ |||||||||+|||++.++.+||+|||+|+.+..
T Consensus 102 mEy~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 999999999999976432 2578999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
........+||+.|||||++.+.+++.++ ||||+||++|+
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~--DiwSlGvilye 217 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKS--DIWALGCVLYE 217 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHH--HHHHHHHHHHH
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHH--HHHHHHHHHHH
Confidence 33333456799999999999999998876 99999999996
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.9e-46 Score=385.34 Aligned_cols=208 Identities=25% Similarity=0.379 Sum_probs=181.1
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.+.|++.+.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+|++++|||||++++++.+++.+|||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 46799999999999999999965 479999999997654333 35678999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
||||+||+|.+++... .+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 9999999999999763 489999999999999999999999 999999999999999999999999999998866
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHHHh
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQEL 668 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~~l 668 (701)
........+||+.|||||++.+.+++.++ ||||+||++|+|+.+.|. ...+..++++.+
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~--DiWSlGvilyeml~G~~PF~~~~~~~~~~~i 282 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEV--DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHH--HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 65566677899999999999998888776 999999999998877643 233444444443
No 7
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-45 Score=382.72 Aligned_cols=216 Identities=25% Similarity=0.465 Sum_probs=180.3
Q ss_pred hcCCccceEEeeccceEEEEEEcC------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (701)
.++|.+.++||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++|+|.+++
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 457888899999999999999753 47889999997542 344678999999999999999999999999999
Q ss_pred EEEEEEEccCCCCHHHHHhcCCC------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDE------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS 590 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~ 590 (701)
..|||||||++|+|.++++.... ..+++|.+++.|+.|||.||+|||++ +||||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 99999999999999999976431 23589999999999999999999999 9999999999999999
Q ss_pred CCCeEEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------------
Q 041034 591 NLEAFVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------- 649 (701)
Q Consensus 591 ~~~~kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------- 649 (701)
++.+||+|||+|+....... ......||+.|||||++.+..++.++ ||||+|+++||
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~s--DvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~ 271 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES--DVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHH--HHHHHHHHHHHHHTTSCCTTCSSCHHHHHH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccc--cccchHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999999987643322 22345799999999999999888776 99999999995
Q ss_pred ------------------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 ------------------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 ------------------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||+.+|.+||||+||++.|+...
T Consensus 272 ~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 272 CITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 88899999999999988887654
No 8
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.9e-45 Score=379.07 Aligned_cols=194 Identities=22% Similarity=0.336 Sum_probs=166.5
Q ss_pred hcCCccceEEeeccceEEEEEEcC------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (701)
.+++++.+.||+|+||+||+|.+. +++.||||+++..... ...++|.+|+.++++++|||||+++|+|.+++
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--HHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 355778899999999999999752 4678999999765432 33578999999999999999999999999999
Q ss_pred EEEEEEEccCCCCHHHHHhcCCC-------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDE-------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN 589 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~ 589 (701)
..++|||||++|+|.+++..... ...++|.++..|+.|||.||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 99999999999999999965321 23589999999999999999999999 999999999999999
Q ss_pred CCCCeEEEeecCccccccCC--CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 590 SNLEAFVADFGTARLLHVDS--SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 590 ~~~~~kL~DFGla~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
+++.+||+|||+|+...... .......||+.|||||++.+..++.++ ||||+|+++||
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ks--DVwSfGvvl~E 239 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDS--DIWSYGVVLWE 239 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHH
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccc--hhhhHHHHHHH
Confidence 99999999999998764332 223445799999999999988888776 99999999996
No 9
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.5e-45 Score=378.32 Aligned_cols=193 Identities=25% Similarity=0.465 Sum_probs=166.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (701)
.++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++|++.+++
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC---HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC---hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 467899999999999999999753 47789999997543 344678999999999999999999999999999
Q ss_pred EEEEEEEccCCCCHHHHHhcCC----------CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC
Q 041034 523 CMFFIYEYMERGSLFYVLRDDD----------EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL 592 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~ 592 (701)
..++|||||++|+|.++++... ....++|.++..|+.|||.||+|||++ +||||||||+|||++.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999997642 234699999999999999999999999 999999999999999999
Q ss_pred CeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 593 EAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 593 ~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
.+||+|||+|+........ .....||+.|||||++.+..++.++ ||||+|+++||
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~--DVwS~Gvvl~E 222 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES--DVWSLGVVLWE 222 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchh--hHHHHHHHHHH
Confidence 9999999999876433222 1234689999999999988888876 99999999996
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-45 Score=368.70 Aligned_cols=212 Identities=23% Similarity=0.376 Sum_probs=167.3
Q ss_pred cCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (701)
++|++.+.||+|+||+||+|.. .+|+.||||++.+....+....+.+.+|++++++++||||+++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999966 469999999998766555555678999999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccC
Q 041034 529 EYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVD 608 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~ 608 (701)
||+ +|+|.+++.+.. .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 679999998755 599999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCceeecccccccCCCCCCCCcCC-hhhHHHHHHHHHHHHHcccCCC-CCCCCHHHHHHHhhcC
Q 041034 609 SSNRTLRAGTYGYIAPDQRLSPPVN-QKIIQDIILVSTTALACLRSKP-KSRPTMQRISQELEGK 671 (701)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~Di~slg~i~~~cl~~~P-~~Rpt~~~i~~~l~~~ 671 (701)
......+||+.|||||++.+..+. .++ ||||+||++|+|+++.+ ....+..++.+.+...
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~--DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~ 227 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEV--DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 227 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChh--hhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 233456899999999999888765 444 99999999999998874 4445666666655443
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.3e-45 Score=386.91 Aligned_cols=208 Identities=25% Similarity=0.381 Sum_probs=181.1
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.+.|++.+.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+|+.++|||||+++++|.+++.+|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 46799999999999999999965 479999999998654433 35688999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
||||+||+|.++++.. .+++..+..|+.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999999754 489999999999999999999999 999999999999999999999999999998866
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC-CCCHHHHHHHh
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS-RPTMQRISQEL 668 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~-Rpt~~~i~~~l 668 (701)
........+||+.|||||++.+..|+.++ ||||+||++|+|+.+.|.. ..+..++++.+
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~--DiWSlGvilyeml~G~~PF~~~~~~~~~~~i 359 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEV--DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHH--HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH
Confidence 65566677899999999999999898876 9999999999987776432 23333444433
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.3e-45 Score=382.06 Aligned_cols=185 Identities=26% Similarity=0.333 Sum_probs=161.8
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.+.|++.++||+|+||+||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++.+|||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 45788999999999999999965 4699999999986532 24699999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC-CeEEEeecCccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL-EAFVADFGTARLLH 606 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~-~~kL~DFGla~~~~ 606 (701)
||||+||+|.+++++.. .+++..+..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+.
T Consensus 129 mEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999998654 599999999999999999999999 999999999999999987 69999999999875
Q ss_pred cCCCC-----ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 607 VDSSN-----RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 607 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
.+... ....+||+.|||||++.+.+++.++ ||||+||++|+
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~--DiwSlGvilye 248 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV--DIWSSCCMMLH 248 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHH
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHH--HHHHHHHHHHH
Confidence 43221 2235799999999999999898876 99999999996
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.7e-45 Score=374.16 Aligned_cols=214 Identities=25% Similarity=0.354 Sum_probs=185.4
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||+||+|+. .+++.||||++.+....+....+.+.+|++++++++|||||++++++++++..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999955 57999999999765432233357789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
||||+||+|.+++.+.+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 99999999999998654 599999999999999999999999 999999999999999999999999999998754
Q ss_pred CC--CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC-CCCHHHHHHHhhc
Q 041034 608 DS--SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS-RPTMQRISQELEG 670 (701)
Q Consensus 608 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~-Rpt~~~i~~~l~~ 670 (701)
.. ......+||+.|||||++.+.+++.++ ||||+||++|+|+.+.|.. ..+..++.+.+..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~--DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~ 248 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK 248 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHH--HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 32 234456899999999999988888776 9999999999999998544 4566666655543
No 14
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-45 Score=373.70 Aligned_cols=215 Identities=26% Similarity=0.433 Sum_probs=178.4
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
++...+++++.+.||+|+||+||+|++. ..||||+++.... .....+.|.+|+.++++++|||||+++|++.+ +.+
T Consensus 31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~ 106 (307)
T 3omv_A 31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNL 106 (307)
T ss_dssp CBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSC
T ss_pred cEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeE
Confidence 3445678899999999999999999874 3699999876443 34456889999999999999999999998865 568
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
+||||||++|+|.++++.... .+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+.
T Consensus 107 ~iVmEy~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 181 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp EEEEECCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred EEEEEcCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCcee
Confidence 999999999999999976543 599999999999999999999999 999999999999999999999999999987
Q ss_pred cccCC--CCceeecccccccCCCCCCCC---cCChhhHHHHHHHHHHHHH------------------------------
Q 041034 605 LHVDS--SNRTLRAGTYGYIAPDQRLSP---PVNQKIIQDIILVSTTALA------------------------------ 649 (701)
Q Consensus 605 ~~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Di~slg~i~~~------------------------------ 649 (701)
..... ......+||+.|||||++.+. +++.++ ||||+|+++|+
T Consensus 182 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ks--DVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~ 259 (307)
T 3omv_A 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS--DVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDL 259 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHH--HHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCS
T ss_pred cccCCcceeecccccCCCccCHHHhhccCCCCCCcHH--HhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCc
Confidence 64322 223456799999999998543 466665 99999999995
Q ss_pred -----------------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -----------------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -----------------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
||+.+|.+||||.||++.|+.
T Consensus 260 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 888888888888888887764
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.3e-44 Score=371.89 Aligned_cols=195 Identities=24% Similarity=0.405 Sum_probs=159.9
Q ss_pred cCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc------
Q 041034 450 EDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR------ 522 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 522 (701)
++|++.+.||+|+||+||+|+. .+|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 5699999999999999999965 479999999997543 3344578999999999999999999999987544
Q ss_pred ------EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEE
Q 041034 523 ------CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFV 596 (701)
Q Consensus 523 ------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL 596 (701)
..|+|||||++|+|.+++.........++..++.++.||+.||+|||++ |||||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3799999999999999998766555567788999999999999999999 9999999999999999999999
Q ss_pred EeecCccccccCCCC------------ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 597 ADFGTARLLHVDSSN------------RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 597 ~DFGla~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
+|||+|+.+...... .+..+||+.|||||++.+.+++.++ ||||+||++|+|+
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~--DiwSlGvilyell 224 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV--DIFSLGLILFELL 224 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHH--HHHHHHHHHHHHH
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHH--HHHHHHHHHHHHc
Confidence 999999887543221 2335799999999999998888776 9999999999744
No 16
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.3e-44 Score=364.65 Aligned_cols=209 Identities=23% Similarity=0.366 Sum_probs=173.6
Q ss_pred CccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee----CcEEEE
Q 041034 452 FHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH----KRCMFF 526 (701)
Q Consensus 452 y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 526 (701)
|++.+.||+|+||+||+|.+ .+++.||+|++...... ....+.|.+|++++++++|||||++++++.+ ++.+||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 36678899999999999965 46899999999765433 3346789999999999999999999999875 356899
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc-CCCCeEEEeecCcccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN-SNLEAFVADFGTARLL 605 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~-~~~~~kL~DFGla~~~ 605 (701)
|||||++|+|.+++++.. .+++..+..++.||+.||+|||++ .++||||||||+|||++ .++.+||+|||+|+..
T Consensus 107 vmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999999998654 589999999999999999999998 12399999999999997 4799999999999864
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHHhhc
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS--RPTMQRISQELEG 670 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~--Rpt~~~i~~~l~~ 670 (701)
. .......+||+.|||||++.+ +++.++ ||||+||++|+|+++.+.. .....++.+.+..
T Consensus 183 ~--~~~~~~~~GTp~YmAPE~~~~-~y~~~~--DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~ 244 (290)
T 3fpq_A 183 R--ASFAKAVIGTPEFMAPEMYEE-KYDESV--DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 244 (290)
T ss_dssp C--TTSBEESCSSCCCCCGGGGGT-CCCTHH--HHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred C--CCccCCcccCccccCHHHcCC-CCCcHH--HHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc
Confidence 3 334456689999999999865 577665 9999999999999988543 3455666665544
No 17
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-43 Score=388.78 Aligned_cols=365 Identities=22% Similarity=0.240 Sum_probs=276.3
Q ss_pred CCCCCCcce--eEeCCC---------CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeC-CcccCCCCCCC
Q 041034 22 TSDHCNWVG--ITCDYK---------GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSI-PPQIGSLSNLK 89 (701)
Q Consensus 22 ~~d~c~w~g--v~c~~~---------~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~~l~~L~ 89 (701)
..+.|.|.+ |.|+.. .+++.|++++|.+++. .+..|+.+++|++|+|++|.+.+.+ +..|..+++|+
T Consensus 4 ~~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~ 82 (455)
T 3v47_A 4 GTSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAEL-NETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLI 82 (455)
T ss_dssp ---CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEE-CTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCC
T ss_pred ccceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcC-ChhHhccCccccEEECcCCcccceECcccccccccCC
Confidence 445676665 788743 4688899999988754 3446888999999999999887555 56788899999
Q ss_pred EEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccc--cCCccccceeecccccCCCCCccc-ccCCCCCcEEEce
Q 041034 90 YLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIE--IGSLRNLEELYLRSNKLSGVLPQE-IGNLKSLIWLSVM 166 (701)
Q Consensus 90 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~ 166 (701)
+|+|++|++++..|..|.++++|++|+|++|++++..+.. |..+++|++|+|++|++++..|.. +.++++|++|+++
T Consensus 83 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~ 162 (455)
T 3v47_A 83 ILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLT 162 (455)
T ss_dssp EEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECT
T ss_pred EEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCC
Confidence 9999999999888888999999999999999998755544 888999999999999998887776 7889999999999
Q ss_pred ecccCCCcCcccccc--cccceeEeeecccCCCCCCCC--------CCccccCccccccccccCCccccccCC---Cccc
Q 041034 167 YNTVGGPIPSTLFRL--TNLERLFLGCNQFNGTIPREI--------GNLKNLTHLSIITNKLTGAIPSTLGHL---TSLL 233 (701)
Q Consensus 167 ~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~--------~~l~~L~~L~l~~N~l~~~~p~~l~~l---~~L~ 233 (701)
+|.+++..+..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+..+ ++|+
T Consensus 163 ~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~ 242 (455)
T 3v47_A 163 FNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQ 242 (455)
T ss_dssp TCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEE
T ss_pred CCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcccccccee
Confidence 999988888888776 688889999998887655443 356789999999999888777766544 6677
Q ss_pred EEEeccCCCCCCC----------CcccCC--CCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCc
Q 041034 234 YLDLSFNQLHSFI----------PLEIGN--FSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKL 301 (701)
Q Consensus 234 ~L~L~~N~l~~~~----------~~~~~~--~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 301 (701)
.|++++|.+.+.. +..+.. .++|+.|++++|++++..|..+..+++|+.|+|++|.+++..|..+..+
T Consensus 243 ~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 322 (455)
T 3v47_A 243 SLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGL 322 (455)
T ss_dssp EEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred eEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCc
Confidence 7777766544321 111111 2567777777777777777777777777777777777777777777777
Q ss_pred cceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCcc----cccccc
Q 041034 302 FNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLH----PMFLDM 377 (701)
Q Consensus 302 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~----~~~l~l 377 (701)
++|+.|+|++|.+++..|..+..+++|+.|+|++|++++..|..+..+++|++|+|++|++++..+..+. ...+++
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 402 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWL 402 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEc
Confidence 7777777777777766677777777777777777777777777777777777777777777764443332 236777
Q ss_pred ccCCCCCcCC
Q 041034 378 SFNNLEGEIP 387 (701)
Q Consensus 378 s~N~l~g~~p 387 (701)
++|++++..|
T Consensus 403 ~~N~l~~~~~ 412 (455)
T 3v47_A 403 HTNPWDCSCP 412 (455)
T ss_dssp CSSCBCCCTT
T ss_pred cCCCcccCCC
Confidence 7777777766
No 18
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.6e-44 Score=366.93 Aligned_cols=213 Identities=21% Similarity=0.247 Sum_probs=175.0
Q ss_pred hcCCccceEEeeccceEEEEEEc----CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL----PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
.++|++.+.||+|+||+||+|+. ..++.||||++++....... ..++.+|++++++++|||||++++++.+++..
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE-CC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH-HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 36799999999999999999964 24788999999765432211 24678899999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
|+|||||+||+|.+++.+.. .+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999998754 599999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHHHhhc
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQELEG 670 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~~l~~ 670 (701)
...........+||+.|||||++.+.+++.++ ||||+||++|+|+++.|. ...+..++++.+..
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~--DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~ 240 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSA--DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCC--cccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc
Confidence 65444455567899999999999998888776 999999999999998844 44566665555433
No 19
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=406.92 Aligned_cols=380 Identities=24% Similarity=0.243 Sum_probs=256.3
Q ss_pred CCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeC-CcccCCCCCCCEEECcCCcCcccCC
Q 041034 25 HCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSI-PPQIGSLSNLKYLNLRWNNLTGTIP 103 (701)
Q Consensus 25 ~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p 103 (701)
.|+|..|++ ...+++.|+|+.|.+++. .+..|+.+++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|
T Consensus 13 ~~~L~~vP~-lp~~l~~LdLs~N~i~~i-~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ-VLNTTERLLLSFNYIRTV-TASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS-SCTTCCEEEEESCCCCEE-CSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC-CCCCcCEEECCCCcCCcc-ChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 367889988 778999999999999854 4457899999999999999766555 7789999999999999999999999
Q ss_pred cccCCCCCCCEEECCCCCCCCCCccc--cCCccccceeecccccCCCCCc-ccccCCCCCcEEEceecccCCCcCccccc
Q 041034 104 KEIGSLRNLEVLYLSNNSLHGTTPIE--IGSLRNLEELYLRSNKLSGVLP-QEIGNLKSLIWLSVMYNTVGGPIPSTLFR 180 (701)
Q Consensus 104 ~~~~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 180 (701)
+.|.++++|++|+|++|.+++..|.. |..+++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 99999999999999999999866654 8999999999999999988765 57999999999999999988877666654
Q ss_pred c--cccceeEeeecccCC--------------------------------------------------------------
Q 041034 181 L--TNLERLFLGCNQFNG-------------------------------------------------------------- 196 (701)
Q Consensus 181 l--~~L~~L~L~~N~l~~-------------------------------------------------------------- 196 (701)
+ ++|+.|+|+.|.+.+
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 4 334433333333333
Q ss_pred ------------------------------CCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCC
Q 041034 197 ------------------------------TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFI 246 (701)
Q Consensus 197 ------------------------------~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 246 (701)
..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 22333444445555555555555444555555555555555555555544
Q ss_pred CcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCc-------------------------------
Q 041034 247 PLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIP------------------------------- 295 (701)
Q Consensus 247 ~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~------------------------------- 295 (701)
|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++...
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~ 410 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSE 410 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCS
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeeccc
Confidence 5555555555555555555555545555555555555555555442100
Q ss_pred ---------ccccCccceeeecCCCCcCCC------------------------------CCCCcccCCCCCCeeeccCC
Q 041034 296 ---------FAIGKLFNLVSLDLSKNKLSG------------------------------SFPTGIGNCTELQHLALNHN 336 (701)
Q Consensus 296 ---------~~~~~l~~L~~L~Ls~N~l~~------------------------------~~p~~~~~l~~L~~L~L~~N 336 (701)
..+..+++|+.|+|++|++++ ..|..|..+++|+.|+|++|
T Consensus 411 N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N 490 (844)
T 3j0a_A 411 NRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHN 490 (844)
T ss_dssp CCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHH
T ss_pred CccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCC
Confidence 001133344444444444432 11233555667777777777
Q ss_pred ccCCCCCccccccccCCeEEcccccCcccCCCCcc--ccccccccCCCCCcCCCcCCCCCCCCcCCCccccc
Q 041034 337 SLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLH--PMFLDMSFNNLEGEIPTYLRDNPPNSFVGNKGLCG 406 (701)
Q Consensus 337 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~--~~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~ 406 (701)
++++..|..|..+++|+.|+|++|+|++..|..+. ...||+++|++++.+|..+.....-.+.+|+..|.
T Consensus 491 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 491 YLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICE 562 (844)
T ss_dssp HHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCS
T ss_pred cccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccc
Confidence 77777777777778888888888888765555443 24678888888888777655443334455555553
No 20
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-43 Score=364.24 Aligned_cols=195 Identities=26% Similarity=0.341 Sum_probs=156.8
Q ss_pred cCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc----EEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR----CMF 525 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~ 525 (701)
++|.+.+.||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||++++++.+++ .+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4688899999999999999987 589999999965421 1123345677778899999999999998653 689
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD-----CTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
||||||++|+|.++++.. .++|..+.+++.|++.||+|||++ +.++||||||||+|||++.++.+||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999999864 489999999999999999999975 24589999999999999999999999999
Q ss_pred CccccccCCCC----ceeecccccccCCCCCCCCcC----ChhhHHHHHHHHHHHHHcccC
Q 041034 601 TARLLHVDSSN----RTLRAGTYGYIAPDQRLSPPV----NQKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 601 la~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~----~~~~~~Di~slg~i~~~cl~~ 653 (701)
+|+........ ....+||+.|||||++.+... .....+||||+|+++||++++
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg 214 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHC
Confidence 99876543221 223579999999999876421 122345999999999976543
No 21
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.3e-43 Score=371.84 Aligned_cols=222 Identities=23% Similarity=0.352 Sum_probs=186.5
Q ss_pred HHHHHhhhcCCccceEEeeccceEEEEEEcC------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCC-Cceeee
Q 041034 442 YEDLINATEDFHIRYCIGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH-RNIVKL 514 (701)
Q Consensus 442 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l 514 (701)
..+++...++|++.+.||+|+||+||+|.+. .++.||||+++..... ...+.+.+|+++|++++| ||||++
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~--~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh--HHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3456777899999999999999999999653 2468999999865433 335789999999999975 999999
Q ss_pred eeeeeeC-cEEEEEEEccCCCCHHHHHhcCCC-------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 041034 515 YGFCLHK-RCMFFIYEYMERGSLFYVLRDDDE-------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRD 580 (701)
Q Consensus 515 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~D 580 (701)
+|+|.++ +.+++|||||++|+|.++++.... ...+++..+..++.|||.||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9998764 568999999999999999975421 23489999999999999999999999 999999
Q ss_pred CCCCcEEEcCCCCeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH---------
Q 041034 581 ISSNNILLNSNLEAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA--------- 649 (701)
Q Consensus 581 lkp~NIll~~~~~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~--------- 649 (701)
|||+|||+++++.+||+|||+|+.+..+... .....||+.|||||++.+..++.++ ||||+|+++||
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ks--DVwS~Gv~l~El~t~G~~Pf 288 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIFSLGASPY 288 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHTTTSCCSS
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcc--cEeehHHHHHHHHhCCCCCC
Confidence 9999999999999999999999876544332 2345689999999999988888776 99999999996
Q ss_pred -----------------------------------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -----------------------------------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -----------------------------------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
||+.+|.+|||++||++.|+.
T Consensus 289 ~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 289 PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp TTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 777788888888888777654
No 22
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.9e-42 Score=393.65 Aligned_cols=145 Identities=27% Similarity=0.316 Sum_probs=132.4
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.|+++++.+++ ++...|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKI-LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCE-eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 579999999999986 4455789999999999999999999999999999999999999999999899999999999999
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCC-CCcccccCCCCCcEEEceecccCCCcCccccccc
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSG-VLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLT 182 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 182 (701)
|++|++++..+..++.+++|++|+|++|++++ .+|..|+++++|++|++++|.+++..+..+..++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 177 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLR 177 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHH
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhh
Confidence 99999998888899999999999999999987 5699999999999999999999887776555444
No 23
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-42 Score=395.19 Aligned_cols=350 Identities=21% Similarity=0.308 Sum_probs=307.9
Q ss_pred CCcceeEeC--CCCCEEEEEecccccccc-----------------cCCcccC--CCCCCcEEECCCCcceeeCCcccCC
Q 041034 26 CNWVGITCD--YKGSITHIELVECSIKGE-----------------LGSLNFS--CFPNLQYLNLWNNNLSGSIPPQIGS 84 (701)
Q Consensus 26 c~w~gv~c~--~~~~v~~l~l~~~~~~~~-----------------~~~~~~~--~~~~L~~L~L~~n~l~~~~~~~~~~ 84 (701)
+...|++-. .-.+++.|+|++|.++|. ++. .++ .+++|++|+|++|.+.+.+|..|++
T Consensus 193 n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 193 NNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCch-hhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 345555322 235789999999999984 544 455 8999999999999999999999999
Q ss_pred CCCCCEEECcCCc-Ccc-cCCcccCCC------CCCCEEECCCCCCCCCCcc--ccCCccccceeecccccCCCCCcccc
Q 041034 85 LSNLKYLNLRWNN-LTG-TIPKEIGSL------RNLEVLYLSNNSLHGTTPI--EIGSLRNLEELYLRSNKLSGVLPQEI 154 (701)
Q Consensus 85 l~~L~~L~L~~n~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~ 154 (701)
+++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .++.+++|++|+|++|+++|.+| .|
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 9999999999998 998 899888877 99999999999999 7887 89999999999999999998889 99
Q ss_pred cCCCCCcEEEceecccCCCcCcccccccc-cceeEeeecccCCCCCCCCCCcc--ccCccccccccccCCcccccc----
Q 041034 155 GNLKSLIWLSVMYNTVGGPIPSTLFRLTN-LERLFLGCNQFNGTIPREIGNLK--NLTHLSIITNKLTGAIPSTLG---- 227 (701)
Q Consensus 155 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~p~~l~---- 227 (701)
+++++|+.|+|++|.++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|++++|.+++.+|..+.
T Consensus 350 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 350 GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 99999999999999998 88888999999 999999999999 7888887765 899999999999999999888
Q ss_pred ---CCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCccc-CCC-------CCCcEEEccCccCCCCCcc
Q 041034 228 ---HLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDEL-SKL-------SNLQYLNLSSNLLSGQIPF 296 (701)
Q Consensus 228 ---~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l-~~l-------~~L~~L~L~~N~l~~~~~~ 296 (701)
.+++|++|+|++|++++..+..+..+++|+.|+|++|+|+ .+|..+ ..+ ++|+.|+|++|.++ .+|.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~ 505 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSD 505 (636)
T ss_dssp SCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCG
T ss_pred ccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccCh
Confidence 8889999999999999754445667999999999999999 555543 333 29999999999999 7888
Q ss_pred ccc--CccceeeecCCCCcCCCCCCCcccCCCCCCeeec------cCCccCCCCCccccccccCCeEEcccccCcccCCC
Q 041034 297 AIG--KLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLAL------NHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPM 368 (701)
Q Consensus 297 ~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 368 (701)
.+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..++.+++|+.|+|++|++ +.+|.
T Consensus 506 ~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~ 583 (636)
T 4eco_A 506 DFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNE 583 (636)
T ss_dssp GGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred hhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCH
Confidence 887 89999999999999997 8999999999999999 56889999999999999999999999999 78898
Q ss_pred Cccc--cccccccCCCCC
Q 041034 369 TLHP--MFLDMSFNNLEG 384 (701)
Q Consensus 369 ~~~~--~~l~ls~N~l~g 384 (701)
.+.. ..||+++|++..
T Consensus 584 ~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 584 KITPNISVLDIKDNPNIS 601 (636)
T ss_dssp CCCTTCCEEECCSCTTCE
T ss_pred hHhCcCCEEECcCCCCcc
Confidence 7654 479999998863
No 24
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.3e-42 Score=375.83 Aligned_cols=360 Identities=19% Similarity=0.169 Sum_probs=306.6
Q ss_pred EEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccC-CcccCCCCCCCEEECCCC
Q 041034 42 IELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTI-PKEIGSLRNLEVLYLSNN 120 (701)
Q Consensus 42 l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N 120 (701)
++..+++++. ++. -.++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|
T Consensus 15 ~~c~~~~l~~-lp~----l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 15 AICINRGLHQ-VPE----LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EECCSSCCSS-CCC----CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred cCcCCCCccc-CCC----CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 5556666653 333 2378999999999999999999999999999999999998554 678999999999999999
Q ss_pred CCCCCCccccCCccccceeecccccCCCCCccc--ccCCCCCcEEEceecccCCCcCcc-cccccccceeEeeecccCCC
Q 041034 121 SLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQE--IGNLKSLIWLSVMYNTVGGPIPST-LFRLTNLERLFLGCNQFNGT 197 (701)
Q Consensus 121 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~ 197 (701)
++++..|..|.++++|++|+|++|++++..+.. |.++++|++|+|++|.+++..|.. +.++++|++|++++|++++.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 999999999999999999999999999866555 999999999999999999998876 89999999999999999999
Q ss_pred CCCCCCCc--cccCccccccccccCCccccc--------cCCCcccEEEeccCCCCCCCCcccCCC---CcccEEEcCCC
Q 041034 198 IPREIGNL--KNLTHLSIITNKLTGAIPSTL--------GHLTSLLYLDLSFNQLHSFIPLEIGNF---SALAELDLSDN 264 (701)
Q Consensus 198 ~~~~~~~l--~~L~~L~l~~N~l~~~~p~~l--------~~l~~L~~L~L~~N~l~~~~~~~~~~~---~~L~~L~L~~N 264 (701)
.+..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|
T Consensus 170 ~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~ 249 (455)
T 3v47_A 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249 (455)
T ss_dssp CTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTC
T ss_pred ChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccc
Confidence 99999887 789999999999997665543 367899999999999999888766543 89999999999
Q ss_pred CCccc----------cCcccCC--CCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeee
Q 041034 265 KIRGI----------IPDELSK--LSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLA 332 (701)
Q Consensus 265 ~l~~~----------~p~~l~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 332 (701)
.+.+. .+..+.. .++|+.|++++|.+++.+|..+..+++|+.|+|++|++++..|..+..+++|++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 329 (455)
T 3v47_A 250 YNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329 (455)
T ss_dssp TTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEE
Confidence 76543 2222332 36899999999999999999999999999999999999998899999999999999
Q ss_pred ccCCccCCCCCccccccccCCeEEcccccCcccCCCCccc----cccccccCCCCCcCCCcCCCCCC---CCcCCCcccc
Q 041034 333 LNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP----MFLDMSFNNLEGEIPTYLRDNPP---NSFVGNKGLC 405 (701)
Q Consensus 333 L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls~N~l~g~~p~~~~~~~~---~~~~~~~~~~ 405 (701)
|++|++++..|..++.+++|+.|+|++|++++..|..+.. .+|++++|++++..+..+...+. -...+|+-.|
T Consensus 330 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 330 LSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp CCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 9999999888999999999999999999999888876653 48999999999755544443332 2334555444
Q ss_pred c
Q 041034 406 G 406 (701)
Q Consensus 406 ~ 406 (701)
.
T Consensus 410 ~ 410 (455)
T 3v47_A 410 S 410 (455)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.8e-41 Score=382.84 Aligned_cols=356 Identities=21% Similarity=0.215 Sum_probs=309.6
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
..++.|++++|.+++ +++..|+.+++|++|+|++|.+.+..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 578999999999986 4455799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccc--eeEeeeccc
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLE--RLFLGCNQF 194 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~L~~N~l 194 (701)
|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|++++|.+++..|..+..+++|+ .|++++|++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999988888999999999999999999986655666699999999999999998899999999999 899999999
Q ss_pred CCCCCCCCCCc---------------------------------------------------cccCccccccccccCCcc
Q 041034 195 NGTIPREIGNL---------------------------------------------------KNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 195 ~~~~~~~~~~l---------------------------------------------------~~L~~L~l~~N~l~~~~p 223 (701)
++..|..+... .+|+.|++++|.+++..+
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 98777665431 167788888888888888
Q ss_pred ccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcc-cccCcc
Q 041034 224 STLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPF-AIGKLF 302 (701)
Q Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~ 302 (701)
..|..+++|++|++++|+++. +|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+.+|. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~~-lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCSC-CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccCC-CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 888999999999999999985 777888899999999999999988888889999999999999998876655 488889
Q ss_pred ceeeecCCCCcCCCCC--CCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCC-cc----cccc
Q 041034 303 NLVSLDLSKNKLSGSF--PTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMT-LH----PMFL 375 (701)
Q Consensus 303 ~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~----~~~l 375 (701)
+|++|++++|.+++.. |..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..|.. +. ...|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999998765 778888999999999999998888888889999999999999998876654 32 2478
Q ss_pred ccccCCCCCcCCCcCCCCC
Q 041034 376 DMSFNNLEGEIPTYLRDNP 394 (701)
Q Consensus 376 ~ls~N~l~g~~p~~~~~~~ 394 (701)
++++|++++..|..+...+
T Consensus 431 ~l~~n~l~~~~~~~~~~l~ 449 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLP 449 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCT
T ss_pred ECCCCccCCcCHHHHhCCC
Confidence 8999999887776655443
No 26
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.7e-42 Score=359.70 Aligned_cols=288 Identities=31% Similarity=0.501 Sum_probs=188.7
Q ss_pred CHHHHHHHhc------CCCCcCCCCCCCCCCCC--cceeEeCCC---CCEEEEEeccccccc--ccCCcccCCCCCCcEE
Q 041034 1 SEIERQALLN------CGWWKDRIPHNTSDHCN--WVGITCDYK---GSITHIELVECSIKG--ELGSLNFSCFPNLQYL 67 (701)
Q Consensus 1 ~~~~~~~l~~------~~~~~~~~~~~~~d~c~--w~gv~c~~~---~~v~~l~l~~~~~~~--~~~~~~~~~~~~L~~L 67 (701)
.++|++||++ +..+.+.|. .++|||. |.||+|+.. ++|++|++++++++| .++. .|..+++|++|
T Consensus 4 ~~~~~~aL~~~k~~~~~~~~l~~W~-~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L~~L 81 (313)
T 1ogq_A 4 NPQDKQALLQIKKDLGNPTTLSSWL-PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYLNFL 81 (313)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGTTCC-TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTCSEE
T ss_pred CHHHHHHHHHHHHhcCCcccccCCC-CCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCCCee
Confidence 3789999986 111222342 2568998 999999854 677777766666655 3332 34445555555
Q ss_pred ECCC-CcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccC
Q 041034 68 NLWN-NNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKL 146 (701)
Q Consensus 68 ~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 146 (701)
+|++ |++.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|++++..
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-------------------- 141 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTL-------------------- 141 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCC--------------------
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcC--------------------
Confidence 5552 5555555555555555555555555555555555555555555555555554444
Q ss_pred CCCCcccccCCCCCcEEEceecccCCCcCccccccc-ccceeEeeecccCCCCCCCCCCccccCccccccccccCCcccc
Q 041034 147 SGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLT-NLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPST 225 (701)
Q Consensus 147 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 225 (701)
|..|..+++|++|++++|.+++.+|..+..++ +|++|+|++|++++.+|..+..+. |++|++++|.+++..|..
T Consensus 142 ----p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~ 216 (313)
T 1ogq_A 142 ----PPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVL 216 (313)
T ss_dssp ----CGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGG
T ss_pred ----ChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHH
Confidence 44444455555555555555455555555555 666666666666666666666665 777777777777777777
Q ss_pred ccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCcccee
Q 041034 226 LGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLV 305 (701)
Q Consensus 226 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 305 (701)
+..+++|++|+|++|++++.+|. +..+++|+.|+|++|+|++.+|..+..+++|+.|+|++|+++|.+|.. ..+++|+
T Consensus 217 ~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~ 294 (313)
T 1ogq_A 217 FGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFD 294 (313)
T ss_dssp CCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSC
T ss_pred HhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccC
Confidence 77777788888888887775554 677788888888888888888888888888888888888888888875 7788888
Q ss_pred eecCCCCc-CCCC
Q 041034 306 SLDLSKNK-LSGS 317 (701)
Q Consensus 306 ~L~Ls~N~-l~~~ 317 (701)
.|++++|. +.|.
T Consensus 295 ~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 295 VSAYANNKCLCGS 307 (313)
T ss_dssp GGGTCSSSEEEST
T ss_pred hHHhcCCCCccCC
Confidence 88888887 6653
No 27
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=371.48 Aligned_cols=331 Identities=20% Similarity=0.163 Sum_probs=300.1
Q ss_pred CCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceee
Q 041034 61 FPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELY 140 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 140 (701)
.++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 46899999999999999899999999999999999999999999999999999999999999988888899999999999
Q ss_pred cccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccC
Q 041034 141 LRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTG 220 (701)
Q Consensus 141 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 220 (701)
|++|++++..+..|.++++|+.|+|++|.+.+..+..|.++++|+.|+|++|++++..+..+.++++|+.|+|++|.+.+
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999999999999999999999999999999999999999999999999999998777789999999999999999999
Q ss_pred CccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccC
Q 041034 221 AIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGK 300 (701)
Q Consensus 221 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 300 (701)
..+..|..+++|++|++++|.+.+.+|.......+|+.|+|++|+|++..+..+..+++|+.|+|++|.+++..+..+..
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTT
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccc
Confidence 88889999999999999999998888887777789999999999999766578999999999999999999888888999
Q ss_pred ccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCcccc---cccc
Q 041034 301 LFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPM---FLDM 377 (701)
Q Consensus 301 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~---~l~l 377 (701)
+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+... .+++
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~ 350 (477)
T 2id5_A 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNF 350 (477)
T ss_dssp CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCC
T ss_pred cccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhcccc
Confidence 9999999999999999999999999999999999999998877888999999999999999998876543211 2344
Q ss_pred ccCCCCCcCCCcCC
Q 041034 378 SFNNLEGEIPTYLR 391 (701)
Q Consensus 378 s~N~l~g~~p~~~~ 391 (701)
..+.....-|..+.
T Consensus 351 ~~~~~~C~~p~~~~ 364 (477)
T 2id5_A 351 NRQQPTCATPEFVQ 364 (477)
T ss_dssp TTCCCBEEESGGGT
T ss_pred CccCceeCCchHHc
Confidence 45554444454443
No 28
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.7e-41 Score=382.60 Aligned_cols=370 Identities=23% Similarity=0.236 Sum_probs=242.5
Q ss_pred CCCcceeEeCCC------------CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEE
Q 041034 25 HCNWVGITCDYK------------GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLN 92 (701)
Q Consensus 25 ~c~w~gv~c~~~------------~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 92 (701)
.|.|.|+ |+.. .+++.|++++|.+++.. +..|+.+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIG-HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEEC-SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccC-hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 4889888 7632 37899999999988643 44689999999999999999998889999999999999
Q ss_pred CcCCcCcccCCcccCCCCCCCEEECCCCCCCCC-CccccCCccccceeecccccCCCCC-cccccCCCCCcEEEceeccc
Q 041034 93 LRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGT-TPIEIGSLRNLEELYLRSNKLSGVL-PQEIGNLKSLIWLSVMYNTV 170 (701)
Q Consensus 93 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l 170 (701)
|++|++++..|..|+++++|++|+|++|++++. .|..++++++|++|+|++|++.+.+ +..|.++++|++|++++|.+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 999999988888899999999999999999874 5678999999999999999854444 46899999999999999999
Q ss_pred CCCcCccccccc------------------------ccceeEeeecccCCCC--CC-CCCCcc-----------------
Q 041034 171 GGPIPSTLFRLT------------------------NLERLFLGCNQFNGTI--PR-EIGNLK----------------- 206 (701)
Q Consensus 171 ~~~~~~~~~~l~------------------------~L~~L~L~~N~l~~~~--~~-~~~~l~----------------- 206 (701)
++..|..+..++ +|++|++++|++++.. |. ....++
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred cccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 988888776654 4555555555554421 00 000111
Q ss_pred ----------------------------------------------------------------------ccCccccccc
Q 041034 207 ----------------------------------------------------------------------NLTHLSIITN 216 (701)
Q Consensus 207 ----------------------------------------------------------------------~L~~L~l~~N 216 (701)
+|+.|++++|
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n 320 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESS
T ss_pred HHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccC
Confidence 1222222222
Q ss_pred cccCCccccc-cCCCcccEEEeccCCCCCCCC---cccCCCCcccEEEcCCCCCccccC--cccCCCCCCcEEEccCccC
Q 041034 217 KLTGAIPSTL-GHLTSLLYLDLSFNQLHSFIP---LEIGNFSALAELDLSDNKIRGIIP--DELSKLSNLQYLNLSSNLL 290 (701)
Q Consensus 217 ~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~~---~~~~~~~~L~~L~L~~N~l~~~~p--~~l~~l~~L~~L~L~~N~l 290 (701)
+++ .+|..+ ..+++|++|+|++|++++.+| ..++.+++|+.|+|++|+|++..+ ..+..+++|+.|++++|++
T Consensus 321 ~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 399 (549)
T 2z81_A 321 KVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399 (549)
T ss_dssp CCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred ccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC
Confidence 222 122222 234555555555555554332 224445555555555555554321 2345555555555555555
Q ss_pred CCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCc
Q 041034 291 SGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTL 370 (701)
Q Consensus 291 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~ 370 (701)
+ .+|..+..+++|++|++++|+++ .+|..+. ++|+.|+|++|++++.+ ..+++|++|+|++|+++ .+|...
T Consensus 400 ~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~ 470 (549)
T 2z81_A 400 H-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDAS 470 (549)
T ss_dssp C-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGG
T ss_pred c-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCCcc
Confidence 5 34445555555555555555554 2332221 35555555555555432 46788999999999998 677642
Q ss_pred c---ccccccccCCCCCcCCCcCCCCCC---CCcCCCccccc
Q 041034 371 H---PMFLDMSFNNLEGEIPTYLRDNPP---NSFVGNKGLCG 406 (701)
Q Consensus 371 ~---~~~l~ls~N~l~g~~p~~~~~~~~---~~~~~~~~~~~ 406 (701)
. ..+||+++|++++.+|..+...+. -...+|+-.|.
T Consensus 471 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 471 LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp GCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred cCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 2 247899999999888776544332 23445554443
No 29
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-40 Score=378.56 Aligned_cols=330 Identities=22% Similarity=0.253 Sum_probs=211.7
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.|++++|.+++ +.+..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|.++++|++|+
T Consensus 57 ~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~ 135 (606)
T 3t6q_A 57 INLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLY 135 (606)
T ss_dssp TTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEE
T ss_pred ccceEEECCCCccce-eChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEE
Confidence 478899999999986 4445689999999999999999999999999999999999999999988788899999999999
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCc--EEEceecccCCCcCcccccc-------------
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI--WLSVMYNTVGGPIPSTLFRL------------- 181 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l------------- 181 (701)
|++|++++.....+..+++|++|+|++|++++..|..|+.+++|+ .|++++|.+.+..|..+...
T Consensus 136 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~ 215 (606)
T 3t6q_A 136 LGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNL 215 (606)
T ss_dssp CCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCH
T ss_pred CCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhH
Confidence 999999986655666699999999999999988888888888888 77888887776655443210
Q ss_pred --------------------------------------cccceeEeeecccCCCCCCCCCCccccCccccccccccCCcc
Q 041034 182 --------------------------------------TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 182 --------------------------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 223 (701)
.+|+.|++++|.+++..+..|+.+++|++|++++|+++ .+|
T Consensus 216 ~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp 294 (606)
T 3t6q_A 216 LVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELP 294 (606)
T ss_dssp HHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCC
T ss_pred HHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCC
Confidence 04455555555555555555555555555555555555 444
Q ss_pred ccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCc-ccCCCCCCcEEEccCccCCCCC--cccccC
Q 041034 224 STLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPD-ELSKLSNLQYLNLSSNLLSGQI--PFAIGK 300 (701)
Q Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~--~~~~~~ 300 (701)
..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+.+|. .+..+++|+.|++++|.+++.. +..+..
T Consensus 295 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 374 (606)
T 3t6q_A 295 SGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRN 374 (606)
T ss_dssp SSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTT
T ss_pred hhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhccc
Confidence 4555555555555555555554444455555555555555554433332 2444444555555544444333 334444
Q ss_pred ccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCcc-ccccccCCeEEcccccCcccCCC
Q 041034 301 LFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPE-IGKILLLQNLDLSHNNLSGTIPM 368 (701)
Q Consensus 301 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~g~~p~ 368 (701)
+++|+.|++++|.+++..|..+..+++|+.|++++|++++..|.. +..+++|+.|++++|.+++..|.
T Consensus 375 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 443 (606)
T 3t6q_A 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQ 443 (606)
T ss_dssp CTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTT
T ss_pred CCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHH
Confidence 444444444444444444444444444444444444444433322 44444444444444444444333
No 30
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=379.70 Aligned_cols=356 Identities=25% Similarity=0.253 Sum_probs=269.8
Q ss_pred CCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCE
Q 041034 35 YKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEV 114 (701)
Q Consensus 35 ~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 114 (701)
...+++.|+++++.+++ ++...|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|.++++|++
T Consensus 26 l~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (570)
T 2z63_A 26 LPFSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104 (570)
T ss_dssp SCSSCCEEECCSCCCCE-ECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred ccccccEEEccCCccCc-cChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccc
Confidence 34578999999999985 44557899999999999999999888889999999999999999999888899999999999
Q ss_pred EECCCCCCCCCCccccCCccccceeecccccCCCC-CcccccCCCCCcEEEceecccCCCcCccccccccc----ceeEe
Q 041034 115 LYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGV-LPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNL----ERLFL 189 (701)
Q Consensus 115 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~~L~L 189 (701)
|+|++|++++..+..++.+++|++|+|++|.+++. +|..|+++++|+.|++++|.+++..+..+..+++| +.|++
T Consensus 105 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp EECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99999999987777899999999999999999874 68999999999999999998877666655555555 44454
Q ss_pred eecccCCCC-----------------------------------------------------------------------
Q 041034 190 GCNQFNGTI----------------------------------------------------------------------- 198 (701)
Q Consensus 190 ~~N~l~~~~----------------------------------------------------------------------- 198 (701)
++|.+++..
T Consensus 185 ~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 444433222
Q ss_pred ----------CCCCCCccccCccccccccccCCccccc------------------------------------------
Q 041034 199 ----------PREIGNLKNLTHLSIITNKLTGAIPSTL------------------------------------------ 226 (701)
Q Consensus 199 ----------~~~~~~l~~L~~L~l~~N~l~~~~p~~l------------------------------------------ 226 (701)
|..+..+++|++|++++|.+++ +|..+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~ 343 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE 343 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc
Confidence 2222333444444444444432 22211
Q ss_pred cCCCcccEEEeccCCCCCCC--CcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCc-ccccCccc
Q 041034 227 GHLTSLLYLDLSFNQLHSFI--PLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIP-FAIGKLFN 303 (701)
Q Consensus 227 ~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~ 303 (701)
..+++|++|++++|++++.. |..+..+++|+.|++++|.+++..+. +..+++|+.|++++|.+++..| ..+..+++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 422 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 422 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCC
Confidence 45677888888888887654 56677788888888888888765544 7778888888888888876655 46777788
Q ss_pred eeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccC-CCCCccccccccCCeEEcccccCcccCCCCccc----cccccc
Q 041034 304 LVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLD-GTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP----MFLDMS 378 (701)
Q Consensus 304 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls 378 (701)
|+.|++++|.+++..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++++|++++..|..+.. ..|+++
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 888888888887777777788888888888888876 567777788888888888888888776766543 367888
Q ss_pred cCCCCCcCCCcCCCC
Q 041034 379 FNNLEGEIPTYLRDN 393 (701)
Q Consensus 379 ~N~l~g~~p~~~~~~ 393 (701)
+|++++..|..+...
T Consensus 503 ~n~l~~~~~~~~~~l 517 (570)
T 2z63_A 503 SNQLKSVPDGIFDRL 517 (570)
T ss_dssp SSCCSCCCTTTTTTC
T ss_pred CCcCCCCCHHHhhcc
Confidence 888877666554433
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.9e-41 Score=388.84 Aligned_cols=350 Identities=22% Similarity=0.281 Sum_probs=302.5
Q ss_pred CCcceeEeC--CCCCEEEEEecccccccc-----------------cCCc-ccCCCCCCcEEECCCCcceeeCCcccCCC
Q 041034 26 CNWVGITCD--YKGSITHIELVECSIKGE-----------------LGSL-NFSCFPNLQYLNLWNNNLSGSIPPQIGSL 85 (701)
Q Consensus 26 c~w~gv~c~--~~~~v~~l~l~~~~~~~~-----------------~~~~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 85 (701)
+...|++-. .-.+++.|+|++|.++|. ++.. .|..+++|++|+|++|.+.+.+|..|+++
T Consensus 435 N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L 514 (876)
T 4ecn_A 435 NRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL 514 (876)
T ss_dssp CEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC
T ss_pred CcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC
Confidence 344555432 235789999999999982 5442 24499999999999999999999999999
Q ss_pred CCCCEEECcCCc-Ccc-cCCcccCCCC-------CCCEEECCCCCCCCCCcc--ccCCccccceeecccccCCCCCcccc
Q 041034 86 SNLKYLNLRWNN-LTG-TIPKEIGSLR-------NLEVLYLSNNSLHGTTPI--EIGSLRNLEELYLRSNKLSGVLPQEI 154 (701)
Q Consensus 86 ~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~ 154 (701)
++|++|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|. .|+.+++|++|+|++|+++ .+| .|
T Consensus 515 ~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~ 591 (876)
T 4ecn_A 515 PELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AF 591 (876)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CC
T ss_pred CCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hh
Confidence 999999999998 998 7887666554 9999999999999 7887 8999999999999999999 777 99
Q ss_pred cCCCCCcEEEceecccCCCcCcccccccc-cceeEeeecccCCCCCCCCCCccc--cCccccccccccCCccccc---c-
Q 041034 155 GNLKSLIWLSVMYNTVGGPIPSTLFRLTN-LERLFLGCNQFNGTIPREIGNLKN--LTHLSIITNKLTGAIPSTL---G- 227 (701)
Q Consensus 155 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~l~~N~l~~~~p~~l---~- 227 (701)
+++++|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++++.+|... .
T Consensus 592 ~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~ 669 (876)
T 4ecn_A 592 GTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDD 669 (876)
T ss_dssp CTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTT
T ss_pred cCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhcc
Confidence 99999999999999998 88889999999 999999999999 78888887765 9999999999998776432 2
Q ss_pred -CCCcccEEEeccCCCCCCCCcc-cCCCCcccEEEcCCCCCccccCcccCC--------CCCCcEEEccCccCCCCCccc
Q 041034 228 -HLTSLLYLDLSFNQLHSFIPLE-IGNFSALAELDLSDNKIRGIIPDELSK--------LSNLQYLNLSSNLLSGQIPFA 297 (701)
Q Consensus 228 -~l~~L~~L~L~~N~l~~~~~~~-~~~~~~L~~L~L~~N~l~~~~p~~l~~--------l~~L~~L~L~~N~l~~~~~~~ 297 (701)
.+++|+.|+|++|+++. +|.. +..+++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|+++ .+|..
T Consensus 670 ~~~~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~ 746 (876)
T 4ecn_A 670 YKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDD 746 (876)
T ss_dssp CCCCCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGG
T ss_pred ccCCCcCEEEccCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHH
Confidence 34589999999999996 5554 458999999999999999 55655443 239999999999999 78888
Q ss_pred cc--CccceeeecCCCCcCCCCCCCcccCCCCCCeeeccC------CccCCCCCccccccccCCeEEcccccCcccCCCC
Q 041034 298 IG--KLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNH------NSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMT 369 (701)
Q Consensus 298 ~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 369 (701)
+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|..
T Consensus 747 l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~ 824 (876)
T 4ecn_A 747 FRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK 824 (876)
T ss_dssp GSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC
T ss_pred hhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh
Confidence 87 89999999999999997 899999999999999976 889999999999999999999999999 899987
Q ss_pred ccc--cccccccCCCCCc
Q 041034 370 LHP--MFLDMSFNNLEGE 385 (701)
Q Consensus 370 ~~~--~~l~ls~N~l~g~ 385 (701)
+.. ..||+++|++...
T Consensus 825 l~~~L~~LdLs~N~l~~i 842 (876)
T 4ecn_A 825 LTPQLYILDIADNPNISI 842 (876)
T ss_dssp CCSSSCEEECCSCTTCEE
T ss_pred hcCCCCEEECCCCCCCcc
Confidence 654 4799999998743
No 32
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1e-40 Score=380.89 Aligned_cols=366 Identities=22% Similarity=0.230 Sum_probs=287.6
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.|++++|.+++. ++..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~i-~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIETI-EDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCEE-CTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCccccc-CHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 5789999999998854 444688999999999999999988899999999999999999999988888899999999999
Q ss_pred CCCCCCCC-CCccccCCccccceeecccccCCCCCcccccCCCCCc----EEEceecccCCCcCc---------------
Q 041034 117 LSNNSLHG-TTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI----WLSVMYNTVGGPIPS--------------- 176 (701)
Q Consensus 117 Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~--------------- 176 (701)
|++|.+++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|.+++..+.
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n 214 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGN 214 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCC
Confidence 99999986 5688999999999999999998877766555444332 333333333322111
Q ss_pred --------------------------------------------------------------------------------
Q 041034 177 -------------------------------------------------------------------------------- 176 (701)
Q Consensus 177 -------------------------------------------------------------------------------- 176 (701)
T Consensus 215 ~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~ 294 (606)
T 3vq2_A 215 FNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAG 294 (606)
T ss_dssp CSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEES
T ss_pred ccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecC
Confidence
Q ss_pred -------ccccccccceeEeeecccCCCCCC--------------------CCCCccccCccccccccccCC--cccccc
Q 041034 177 -------TLFRLTNLERLFLGCNQFNGTIPR--------------------EIGNLKNLTHLSIITNKLTGA--IPSTLG 227 (701)
Q Consensus 177 -------~~~~l~~L~~L~L~~N~l~~~~~~--------------------~~~~l~~L~~L~l~~N~l~~~--~p~~l~ 227 (701)
.+..+++|+.|++++|++ +.+|. .+..+++|++|++++|++++. .|..+.
T Consensus 295 ~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 373 (606)
T 3vq2_A 295 VSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDL 373 (606)
T ss_dssp CCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHH
T ss_pred ccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhc
Confidence 222333444444444444 23331 345667788888888888865 377888
Q ss_pred CCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccC-cccCCCCCCcEEEccCccCCCCCcccccCccceee
Q 041034 228 HLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIP-DELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVS 306 (701)
Q Consensus 228 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 306 (701)
.+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+..+++|+.|++++|.+++..|..+..+++|+.
T Consensus 374 ~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 452 (606)
T 3vq2_A 374 GTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452 (606)
T ss_dssp CCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCE
Confidence 89999999999999887 56788889999999999999998877 67888999999999999999888888999999999
Q ss_pred ecCCCCcCCC-CCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCccc----cccccccCC
Q 041034 307 LDLSKNKLSG-SFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP----MFLDMSFNN 381 (701)
Q Consensus 307 L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls~N~ 381 (701)
|++++|.+++ .+|..+..+++|+.|+|++|++++..|..++.+++|+.|++++|++++..|..+.. ..||+++|+
T Consensus 453 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc
Confidence 9999999987 47888899999999999999999888888999999999999999999887776653 478999999
Q ss_pred CCCcCCCcCCCCCC----CCcCCCccccc
Q 041034 382 LEGEIPTYLRDNPP----NSFVGNKGLCG 406 (701)
Q Consensus 382 l~g~~p~~~~~~~~----~~~~~~~~~~~ 406 (701)
++ .+|..+...+. -...+|+-.|.
T Consensus 533 l~-~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 533 IE-TSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CC-CEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred Cc-ccCHhHhhhcccCcEEEccCCCcccC
Confidence 98 56665544432 13456665554
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=367.46 Aligned_cols=346 Identities=20% Similarity=0.239 Sum_probs=220.4
Q ss_pred cceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccC
Q 041034 28 WVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIG 107 (701)
Q Consensus 28 w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 107 (701)
...++-+...+++.|++++|.+++. ++..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|+++. +|..
T Consensus 12 l~~ip~~~~~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-- 87 (520)
T 2z7x_B 12 LIHVPKDLSQKTTILNISQNYISEL-WTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH-- 87 (520)
T ss_dssp CSSCCCSCCTTCSEEECCSSCCCCC-CHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--
T ss_pred cccccccccccccEEECCCCccccc-ChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--
Confidence 3344433346888889998888753 33457888899999999999988888888899999999999998884 4544
Q ss_pred CCCCCCEEECCCCCCCC-CCccccCCccccceeecccccCCCCCcccccCCCCC--cEEEceeccc--CCCcCcccccc-
Q 041034 108 SLRNLEVLYLSNNSLHG-TTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSL--IWLSVMYNTV--GGPIPSTLFRL- 181 (701)
Q Consensus 108 ~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~l- 181 (701)
.+++|++|+|++|++++ ..|..|+.+++|++|+|++|++++ ..+..+++| +.|++++|.+ .+..|..+..+
T Consensus 88 ~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 88 PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccc
Confidence 78899999999999887 467888889999999999998876 456677777 8999999888 66666655542
Q ss_pred -------------------------c------------------------------------------------------
Q 041034 182 -------------------------T------------------------------------------------------ 182 (701)
Q Consensus 182 -------------------------~------------------------------------------------------ 182 (701)
+
T Consensus 165 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~ 244 (520)
T 2z7x_B 165 TESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLV 244 (520)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHH
T ss_pred cceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHh
Confidence 2
Q ss_pred ---ccceeEeeecccCCCCCCCC-----CCccccCccccccccccCCcc-ccccCC---CcccEEEeccCCCCCCCCccc
Q 041034 183 ---NLERLFLGCNQFNGTIPREI-----GNLKNLTHLSIITNKLTGAIP-STLGHL---TSLLYLDLSFNQLHSFIPLEI 250 (701)
Q Consensus 183 ---~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~p-~~l~~l---~~L~~L~L~~N~l~~~~~~~~ 250 (701)
+|++|++++|+++|.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+
T Consensus 245 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~ 320 (520)
T 2z7x_B 245 WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CP 320 (520)
T ss_dssp HTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CC
T ss_pred hhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--ch
Confidence 34444555555555555544 4444444444444444 222 111111 22333333333332211 01
Q ss_pred CCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCC--CCcccccCccceeeecCCCCcCCCCCCCc-ccCCCC
Q 041034 251 GNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSG--QIPFAIGKLFNLVSLDLSKNKLSGSFPTG-IGNCTE 327 (701)
Q Consensus 251 ~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~ 327 (701)
..+++|+.|++++|++++.+|..+..+++|+.|+|++|++++ .+|..+..+++|+.|++++|.+++.+|.. +..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 455666666666666666666666666666666666666665 34455666666666666666666545543 555666
Q ss_pred CCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCccc----cccccccCCCCCcCCC
Q 041034 328 LQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP----MFLDMSFNNLEGEIPT 388 (701)
Q Consensus 328 L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls~N~l~g~~p~ 388 (701)
|+.|+|++|++++.+|..+. ++|+.|++++|+++ .+|..+.. ..|++++|+++ .+|.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~ 461 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPD 461 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCT
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCH
Confidence 66666666666655555443 45666666666666 55544322 35666666666 3443
No 34
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=368.65 Aligned_cols=333 Identities=22% Similarity=0.244 Sum_probs=183.3
Q ss_pred EEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCC
Q 041034 40 THIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSN 119 (701)
Q Consensus 40 ~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 119 (701)
..++++++++++ +|.. -.++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|+.|.++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~~---~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKD---LPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCTT---SCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCCC---CCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 455556665553 3221 125566666666666655555566666666666666666655566666666666666666
Q ss_pred CCCCCCCccccCCccccceeecccccCCCC-CcccccCCCCCcEEEceecccCCCcCccccccccc--ceeEeeeccc--
Q 041034 120 NSLHGTTPIEIGSLRNLEELYLRSNKLSGV-LPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNL--ERLFLGCNQF-- 194 (701)
Q Consensus 120 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l-- 194 (701)
|+++ .+|.. .+++|++|+|++|++++. .|..|+++++|++|++++|.+++. .+..+++| +.|++++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 6665 23333 556666666666666552 345566666666666666665542 23333333 5666666655
Q ss_pred CCCCCCCCCCcc--------------------------------------------------------------------
Q 041034 195 NGTIPREIGNLK-------------------------------------------------------------------- 206 (701)
Q Consensus 195 ~~~~~~~~~~l~-------------------------------------------------------------------- 206 (701)
++..|..+..+.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 444444443322
Q ss_pred -------------ccCccccccccccCCccccc-----cCCC--------------------------cccEEEeccCCC
Q 041034 207 -------------NLTHLSIITNKLTGAIPSTL-----GHLT--------------------------SLLYLDLSFNQL 242 (701)
Q Consensus 207 -------------~L~~L~l~~N~l~~~~p~~l-----~~l~--------------------------~L~~L~L~~N~l 242 (701)
+|++|++++|.++|.+|..+ ..++ +|++|++++|.+
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCc
Confidence 45555566666665555544 2222 233344444433
Q ss_pred CCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCC--CcccccCccceeeecCCCCcCCCCCCC
Q 041034 243 HSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQ--IPFAIGKLFNLVSLDLSKNKLSGSFPT 320 (701)
Q Consensus 243 ~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 320 (701)
.... ....+++|+.|++++|++++.+|..+..+++|+.|+|++|++++. +|..+..+++|+.|++++|++++.+|.
T Consensus 344 ~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 421 (562)
T 3a79_B 344 IHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421 (562)
T ss_dssp CCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSS
T ss_pred cccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccCh
Confidence 2211 014556666666666666666666666666666666666666642 234566666666666666666654443
Q ss_pred -cccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCccc----cccccccCCCCCcCCC
Q 041034 321 -GIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP----MFLDMSFNNLEGEIPT 388 (701)
Q Consensus 321 -~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls~N~l~g~~p~ 388 (701)
.+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+.. ..|++++|+++ .+|.
T Consensus 422 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~ 490 (562)
T 3a79_B 422 RTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPD 490 (562)
T ss_dssp CCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCT
T ss_pred hhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCH
Confidence 355566666666666666655554443 45666666666666 45544321 35666666666 3444
No 35
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3e-39 Score=364.97 Aligned_cols=340 Identities=21% Similarity=0.235 Sum_probs=277.1
Q ss_pred CCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCE
Q 041034 35 YKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEV 114 (701)
Q Consensus 35 ~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 114 (701)
...+++.|++++|.+++ +++..|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|+++ .+|.. .+++|++
T Consensus 50 ~~~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~ 125 (562)
T 3a79_B 50 LPPRTKALSLSQNSISE-LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRH 125 (562)
T ss_dssp SCTTCCEEECCSSCCCC-CCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSE
T ss_pred CCCCcCEEECCCCCccc-cChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCE
Confidence 34689999999999985 44457899999999999999999999999999999999999999999 55655 8999999
Q ss_pred EECCCCCCCCC-CccccCCccccceeecccccCCCCCcccccCCCCC--cEEEceeccc--CCCcCccccccc-------
Q 041034 115 LYLSNNSLHGT-TPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSL--IWLSVMYNTV--GGPIPSTLFRLT------- 182 (701)
Q Consensus 115 L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~l~------- 182 (701)
|+|++|++++. .|..|+++++|++|+|++|++++. .+..+++| +.|++++|.+ ++..|..+..+.
T Consensus 126 L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~ 202 (562)
T 3a79_B 126 LDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLV 202 (562)
T ss_dssp EECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEE
T ss_pred EECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEE
Confidence 99999999974 468999999999999999999874 45555555 9999999999 777777666543
Q ss_pred --------------------------------------------------------------------------ccceeE
Q 041034 183 --------------------------------------------------------------------------NLERLF 188 (701)
Q Consensus 183 --------------------------------------------------------------------------~L~~L~ 188 (701)
+|++|+
T Consensus 203 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~ 282 (562)
T 3a79_B 203 FHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLN 282 (562)
T ss_dssp ECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEE
T ss_pred ecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEE
Confidence 788889
Q ss_pred eeecccCCCCCCCC-----CCccc--------------------------cCccccccccccCCccccccCCCcccEEEe
Q 041034 189 LGCNQFNGTIPREI-----GNLKN--------------------------LTHLSIITNKLTGAIPSTLGHLTSLLYLDL 237 (701)
Q Consensus 189 L~~N~l~~~~~~~~-----~~l~~--------------------------L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L 237 (701)
+++|+++|.+|..+ .+++. |++|++++|.+.... ....+++|++|++
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 360 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNF 360 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEEC
T ss_pred EeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEEC
Confidence 99999998888876 44433 555555555554221 1267888999999
Q ss_pred ccCCCCCCCCcccCCCCcccEEEcCCCCCcc--ccCcccCCCCCCcEEEccCccCCCCCcc-cccCccceeeecCCCCcC
Q 041034 238 SFNQLHSFIPLEIGNFSALAELDLSDNKIRG--IIPDELSKLSNLQYLNLSSNLLSGQIPF-AIGKLFNLVSLDLSKNKL 314 (701)
Q Consensus 238 ~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l 314 (701)
++|++++.+|..+.++++|+.|+|++|++++ .+|..+..+++|+.|++++|.+++.+|. .+..+++|+.|+|++|++
T Consensus 361 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l 440 (562)
T 3a79_B 361 TQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNML 440 (562)
T ss_dssp CSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCC
T ss_pred CCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCC
Confidence 9999998888888889999999999999986 3456788899999999999999874554 577888999999999999
Q ss_pred CCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCC-ccc----cccccccCCCCCcCC
Q 041034 315 SGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMT-LHP----MFLDMSFNNLEGEIP 387 (701)
Q Consensus 315 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~----~~l~ls~N~l~g~~p 387 (701)
++.+|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|.. +.. ..+++++|++++..|
T Consensus 441 ~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 441 TGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred Ccchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 887777654 68999999999988 77877778899999999999998 56654 332 468899999887654
No 36
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-39 Score=376.79 Aligned_cols=351 Identities=24% Similarity=0.255 Sum_probs=279.0
Q ss_pred CCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEE
Q 041034 36 KGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVL 115 (701)
Q Consensus 36 ~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 115 (701)
..+++.|+++++.+++ ++...|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|.++++|++|
T Consensus 24 ~~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp CTTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 3579999999999986 455568999999999999999999999999999999999999999997777789999999999
Q ss_pred ECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccc--cccccceeEeeecc
Q 041034 116 YLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLF--RLTNLERLFLGCNQ 193 (701)
Q Consensus 116 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~ 193 (701)
+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|.+++..+..+. .+++|+.|++++|+
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999988889999999999999999999999999999999999999999999988877655 45899999999999
Q ss_pred cCCCCCCCCCCc---------------------------cccCccccccccccCCccccccCCCc--ccEEEeccCCCCC
Q 041034 194 FNGTIPREIGNL---------------------------KNLTHLSIITNKLTGAIPSTLGHLTS--LLYLDLSFNQLHS 244 (701)
Q Consensus 194 l~~~~~~~~~~l---------------------------~~L~~L~l~~N~l~~~~p~~l~~l~~--L~~L~L~~N~l~~ 244 (701)
+++..|..+..+ ++|+.|++++|.+++..|.++..++. |++|+|++|++++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 998888776654 45677788888888888888888765 9999999999998
Q ss_pred CCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCC-----CCcc----cccCccceeeecCCCCcCC
Q 041034 245 FIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSG-----QIPF----AIGKLFNLVSLDLSKNKLS 315 (701)
Q Consensus 245 ~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-----~~~~----~~~~l~~L~~L~Ls~N~l~ 315 (701)
..|..|+.+++|+.|+|++|++++..|..|..+++|+.|++++|...+ .+|. .+..+++|+.|++++|.++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 888888889999999999999988888888888888888888776554 2232 5667788888888888888
Q ss_pred CCCCCcccCCCCCCeeeccCCccCCCC--Ccccccc--ccCCeEEcccccCcccCCCCccc----cccccccCCCCCcCC
Q 041034 316 GSFPTGIGNCTELQHLALNHNSLDGTI--PPEIGKI--LLLQNLDLSHNNLSGTIPMTLHP----MFLDMSFNNLEGEIP 387 (701)
Q Consensus 316 ~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l--~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls~N~l~g~~p 387 (701)
+..|..|..+++|++|++++|.+.+.. +..+..+ ++|+.|++++|++++..|..+.. ..|++++|++++.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 777777777777777777766543221 1112211 34555555555555544443321 245555555554444
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=360.74 Aligned_cols=337 Identities=22% Similarity=0.293 Sum_probs=284.3
Q ss_pred CCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcc-cCCcccCCCCCCCE
Q 041034 36 KGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTG-TIPKEIGSLRNLEV 114 (701)
Q Consensus 36 ~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~ 114 (701)
-.+++.|++++|.+++.. +..|+.+++|++|+|++|.++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++
T Consensus 44 l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~ 119 (520)
T 2z7x_B 44 LSKLRILIISHNRIQYLD-ISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKF 119 (520)
T ss_dssp CTTCCEEECCSSCCCEEE-GGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCE
T ss_pred cccccEEecCCCccCCcC-hHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceE
Confidence 357999999999998654 346899999999999999999 46665 89999999999999997 47899999999999
Q ss_pred EECCCCCCCCCCccccCCcccc--ceeecccccC--CCCCcccccCCC--------------------------------
Q 041034 115 LYLSNNSLHGTTPIEIGSLRNL--EELYLRSNKL--SGVLPQEIGNLK-------------------------------- 158 (701)
Q Consensus 115 L~Ls~N~l~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-------------------------------- 158 (701)
|+|++|++++ ..+..+++| ++|+|++|.+ .+..|..+..+.
T Consensus 120 L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~ 196 (520)
T 2z7x_B 120 LGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSN 196 (520)
T ss_dssp EEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECC
T ss_pred EEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecc
Confidence 9999999986 457778888 9999999999 777777776643
Q ss_pred ---------------------------------------------------CCcEEEceecccCCCcCccc-----cccc
Q 041034 159 ---------------------------------------------------SLIWLSVMYNTVGGPIPSTL-----FRLT 182 (701)
Q Consensus 159 ---------------------------------------------------~L~~L~L~~N~l~~~~~~~~-----~~l~ 182 (701)
+|++|++++|.+++.+|..+ ..++
T Consensus 197 l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~ 276 (520)
T 2z7x_B 197 IKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK 276 (520)
T ss_dssp EEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC
T ss_pred ccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCc
Confidence 78889999999998999988 8999
Q ss_pred ccceeEeeecccCCCCC-CCCCCc---cccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccE
Q 041034 183 NLERLFLGCNQFNGTIP-REIGNL---KNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAE 258 (701)
Q Consensus 183 ~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 258 (701)
+|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++.+|..++.+++|+.
T Consensus 277 ~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 352 (520)
T 2z7x_B 277 ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELET 352 (520)
T ss_dssp EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCE
T ss_pred eeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCE
Confidence 999999999999 455 444444 56999999999887532 1267889999999999999988888999999999
Q ss_pred EEcCCCCCcc--ccCcccCCCCCCcEEEccCccCCCCCcc-cccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccC
Q 041034 259 LDLSDNKIRG--IIPDELSKLSNLQYLNLSSNLLSGQIPF-AIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNH 335 (701)
Q Consensus 259 L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 335 (701)
|+|++|+|++ .+|..+..+++|+.|++++|.+++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++
T Consensus 353 L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~ 430 (520)
T 2z7x_B 353 LILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHS 430 (520)
T ss_dssp EECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCS
T ss_pred EEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCC
Confidence 9999999987 5667788999999999999999985665 477889999999999999888877665 7899999999
Q ss_pred CccCCCCCccccccccCCeEEcccccCcccCCCC-cc----ccccccccCCCCCcCC
Q 041034 336 NSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMT-LH----PMFLDMSFNNLEGEIP 387 (701)
Q Consensus 336 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~----~~~l~ls~N~l~g~~p 387 (701)
|+++ .+|..+..+++|+.|++++|+++ .+|.. +. ...+++++|++++..+
T Consensus 431 N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 431 NKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred Cccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 9998 88888889999999999999998 56654 32 2478999999987543
No 38
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=348.11 Aligned_cols=199 Identities=26% Similarity=0.361 Sum_probs=168.1
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee------C
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH------K 521 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~ 521 (701)
.++|++++.||+|+||+||+|.. .+|+.||||+++.... .....+.+.+|+++|+.++|||||++++++.. .
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 36799999999999999999965 5799999999976543 23445778899999999999999999998764 3
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
+..|+|||||+ |+|.+++.... .+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 57899999996 58999997654 699999999999999999999999 999999999999999999999999999
Q ss_pred ccccccC----CCCceeecccccccCCCCCCCCcC-ChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 602 ARLLHVD----SSNRTLRAGTYGYIAPDQRLSPPV-NQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 602 a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
|+.+... .......+||+.|+|||++.+..+ +.++ ||||+||++|+|+.+.|..
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~--DiWSlG~il~ell~G~~pF 263 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI--DLWSVGCIFGEMLARRQLF 263 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHH--HHHHHHHHHHHHHHTSCSS
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChh--heehhHHHHHHHHHCCCCC
Confidence 9876432 222345689999999999877654 5554 9999999999988877543
No 39
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.4e-39 Score=362.84 Aligned_cols=347 Identities=24% Similarity=0.246 Sum_probs=257.7
Q ss_pred eEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCC
Q 041034 31 ITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLR 110 (701)
Q Consensus 31 v~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 110 (701)
.+|.+.+. .+.++++++. ++.. -.++|++|+|++|.+++..|..|+++++|++|+|++|++++..|+.|.+++
T Consensus 2 ~~C~~~~~---c~~~~~~l~~-ip~~---~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 74 (549)
T 2z81_A 2 LSCDASGV---CDGRSRSFTS-IPSG---LTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLG 74 (549)
T ss_dssp CEECTTSE---EECTTSCCSS-CCSC---CCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCce---EECCCCcccc-cccc---CCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccc
Confidence 46888773 5777777773 4432 237999999999999999999999999999999999999999999999999
Q ss_pred CCCEEECCCCCCCCCCccccCCccccceeecccccCCCC-CcccccCCCCCcEEEceecccCCCcC-cccccccccceeE
Q 041034 111 NLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGV-LPQEIGNLKSLIWLSVMYNTVGGPIP-STLFRLTNLERLF 188 (701)
Q Consensus 111 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ 188 (701)
+|++|+|++|++++..|..|+++++|++|+|++|++++. .|..++++++|++|++++|.+.+.+| ..+.++++|++|+
T Consensus 75 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 75 SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 999999999999999888899999999999999999974 67889999999999999999555554 6899999999999
Q ss_pred eeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCC-----------------------
Q 041034 189 LGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF----------------------- 245 (701)
Q Consensus 189 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~----------------------- 245 (701)
+++|++++..|..++.+++|++|+++.|.+....+..+..+++|++|++++|++++.
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred ccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 999999998998888766655555555554322111122344444444444444431
Q ss_pred --------------------------------------------------------------------------------
Q 041034 246 -------------------------------------------------------------------------------- 245 (701)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (701)
T Consensus 235 l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~ 314 (549)
T 2z81_A 235 LTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKR 314 (549)
T ss_dssp EEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCE
T ss_pred cchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceE
Confidence
Q ss_pred ----------CCccc-CCCCcccEEEcCCCCCccccC---cccCCCCCCcEEEccCccCCCCCc--ccccCccceeeecC
Q 041034 246 ----------IPLEI-GNFSALAELDLSDNKIRGIIP---DELSKLSNLQYLNLSSNLLSGQIP--FAIGKLFNLVSLDL 309 (701)
Q Consensus 246 ----------~~~~~-~~~~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L 309 (701)
+|..+ ..+++|+.|+|++|++++.+| ..++.+++|+.|+|++|++++..+ ..+..+++|++|++
T Consensus 315 L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~L 394 (549)
T 2z81_A 315 ITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDI 394 (549)
T ss_dssp EEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEEC
T ss_pred EEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEEC
Confidence 22222 346677777777777776553 336667777777777777765432 34667777777777
Q ss_pred CCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCccccccccccCCCCCcCCCc
Q 041034 310 SKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMSFNNLEGEIPTY 389 (701)
Q Consensus 310 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~l~ls~N~l~g~~p~~ 389 (701)
++|+++ .+|..+..+++|++|+|++|+++ .+|..+ .++|+.|++++|++++.++..-....|++++|+++ .+|..
T Consensus 395 s~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 469 (549)
T 2z81_A 395 SRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDA 469 (549)
T ss_dssp TTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCG
T ss_pred CCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCCc
Confidence 777777 56777777777777777777776 334333 24677778888877765443334457888888887 66653
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.5e-39 Score=341.70 Aligned_cols=199 Identities=26% Similarity=0.347 Sum_probs=167.6
Q ss_pred HHHHHhhhcCCccceEEeeccceEEEEEEc----CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeee
Q 041034 442 YEDLINATEDFHIRYCIGTGGYGSVYKAEL----PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYG 516 (701)
Q Consensus 442 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 516 (701)
++.+....++|++.+.||+|+||+||+|+. ..++.||+|++..... ..++.+|+++++.+ +||||+++++
T Consensus 13 ~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~E~~~l~~~~~h~nIv~l~~ 87 (361)
T 4f9c_A 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-----PIRIAAELQCLTVAGGQDNVMGVKY 87 (361)
T ss_dssp HHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-----HHHHHHHHHHHHHTCSBTTBCCCSE
T ss_pred HHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-----HHHHHHHHHHHHHhcCCCCCceEEE
Confidence 344445678899999999999999999954 2468899999876532 25678999999998 6999999999
Q ss_pred eeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC-CCeE
Q 041034 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN-LEAF 595 (701)
Q Consensus 517 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~-~~~k 595 (701)
++.+.+..|+||||+++|+|.++++ .+++.++..++.||+.||+|||++ |||||||||+|||++.+ +.+|
T Consensus 88 ~~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 88 CFRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp EEEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred EEEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEE
Confidence 9999999999999999999999984 388999999999999999999999 99999999999999876 7999
Q ss_pred EEeecCccccccCC----------------------------CCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHH
Q 041034 596 VADFGTARLLHVDS----------------------------SNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTT 646 (701)
Q Consensus 596 L~DFGla~~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i 646 (701)
|+|||+|+...... ......+||+.|+|||++.+.+ ++.++ ||||+||+
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~--DiWSlG~i 236 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAI--DMWSAGVI 236 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHH--HHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCcc--chhhhHHH
Confidence 99999998653221 1123357999999999987765 55554 99999999
Q ss_pred HHHcccCCCC
Q 041034 647 ALACLRSKPK 656 (701)
Q Consensus 647 ~~~cl~~~P~ 656 (701)
+|+|+.+.+.
T Consensus 237 l~ell~G~~P 246 (361)
T 4f9c_A 237 FLSLLSGRYP 246 (361)
T ss_dssp HHHHHHTCSS
T ss_pred HHHHHHCCCC
Confidence 9999999843
No 41
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-38 Score=366.57 Aligned_cols=351 Identities=25% Similarity=0.254 Sum_probs=197.7
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.|++++|.+++.. +..|+.+++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 49 ~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLE-PELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TTCSEEECCSSCCCCCC-TTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CcCcEEECCCCccCccC-HHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 35666666666665432 23455566666666666666644444566666666666666666655555666666666666
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCCCccccc--CCCCCcEEEceecccCCCcC-------------------
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIG--NLKSLIWLSVMYNTVGGPIP------------------- 175 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~------------------- 175 (701)
|++|.+++..|..+..+++|++|+|++|++++..+..+. .+++|+.|++++|.+++..|
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 666666666666666666666666666666555554433 23455555555555544443
Q ss_pred --------------------------------cccccccc--cceeEeeecccCCCCCCCCCCccccCccccccccccCC
Q 041034 176 --------------------------------STLFRLTN--LERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA 221 (701)
Q Consensus 176 --------------------------------~~~~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 221 (701)
..|..++. |+.|+|++|++++..|..|+.+++|++|++++|++++.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 34444433 66666666666655556666666666666666666655
Q ss_pred ccccccCCCcccEEEeccCCCCC-----CCCc----ccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEc-------
Q 041034 222 IPSTLGHLTSLLYLDLSFNQLHS-----FIPL----EIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNL------- 285 (701)
Q Consensus 222 ~p~~l~~l~~L~~L~L~~N~l~~-----~~~~----~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L------- 285 (701)
.|..|..+++|++|++++|...+ .+|. .|..+++|+.|++++|++++..|..|.++++|+.|++
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 55444444444444333332221 0111 3344455555555555555555555544444444443
Q ss_pred ---------------------cCccCCCCCcccccCccceeeecCCCCcCCCCCC-CcccCCCCCCeeeccCCccCCCCC
Q 041034 286 ---------------------SSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFP-TGIGNCTELQHLALNHNSLDGTIP 343 (701)
Q Consensus 286 ---------------------~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p 343 (701)
++|++++..|.++..+++|+.|+|++|.+++.+| ..+..+++|+.|++++|++++..+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 3444454555666667777777777777766554 456666777777777777666656
Q ss_pred ccccccccCCeEEcccccCc--ccCCCCccc----cccccccCCCCCcCCC
Q 041034 344 PEIGKILLLQNLDLSHNNLS--GTIPMTLHP----MFLDMSFNNLEGEIPT 388 (701)
Q Consensus 344 ~~~~~l~~L~~l~ls~N~l~--g~~p~~~~~----~~l~ls~N~l~g~~p~ 388 (701)
..+..+++|+.|++++|.++ +.+|..+.. ..|++++|++++..|.
T Consensus 448 ~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~ 498 (680)
T 1ziw_A 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDD 498 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred hhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChh
Confidence 66666666666666666655 344544332 2556666666554443
No 42
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=374.34 Aligned_cols=335 Identities=24% Similarity=0.212 Sum_probs=287.4
Q ss_pred EecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccC-CcccCCCCCCCEEECCCCC
Q 041034 43 ELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTI-PKEIGSLRNLEVLYLSNNS 121 (701)
Q Consensus 43 ~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~ 121 (701)
+.+.++++. +|. ..++|+.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+
T Consensus 10 dcs~~~L~~-vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 10 FYRFCNLTQ-VPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EESCCCSSC-CCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EccCCCCCC-CCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 445666664 332 4578999999999999999999999999999999999666555 8899999999999999999
Q ss_pred CCCCCccccCCccccceeecccccCCCCCccc--ccCCCCCcEEEceecccCCCcC-cccccccccceeEeeecccCCCC
Q 041034 122 LHGTTPIEIGSLRNLEELYLRSNKLSGVLPQE--IGNLKSLIWLSVMYNTVGGPIP-STLFRLTNLERLFLGCNQFNGTI 198 (701)
Q Consensus 122 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~ 198 (701)
+++..|..|.++++|++|+|++|.+++..|.. |+++++|++|+|++|.+++..+ ..|.++++|++|+|++|.+++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 99999999999999999999999999866665 9999999999999999998765 57999999999999999999999
Q ss_pred CCCCCCc--cccCccccccccccCCccccccCCCc------ccEEEeccCCCCCCCCcccCC------------------
Q 041034 199 PREIGNL--KNLTHLSIITNKLTGAIPSTLGHLTS------LLYLDLSFNQLHSFIPLEIGN------------------ 252 (701)
Q Consensus 199 ~~~~~~l--~~L~~L~l~~N~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~~~~~~~------------------ 252 (701)
+..+..+ ++|+.|+++.|.+.+..|..+..+++ |++|++++|.+++..+..+..
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccc
Confidence 9999888 88999999999999988888777766 999999999887665544321
Q ss_pred --------------------CCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCC
Q 041034 253 --------------------FSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKN 312 (701)
Q Consensus 253 --------------------~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 312 (701)
.++|+.|+|++|.+.+..|..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 245 ~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N 324 (844)
T 3j0a_A 245 AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYN 324 (844)
T ss_dssp CSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESC
T ss_pred ccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCC
Confidence 267899999999999888888999999999999999999888888999999999999999
Q ss_pred cCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCccccccccccCCCC
Q 041034 313 KLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHPMFLDMSFNNLE 383 (701)
Q Consensus 313 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~l~ls~N~l~ 383 (701)
.+++..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++ ++.......+++++|+++
T Consensus 325 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 325 LLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IHFIPSIPDIFLSGNKLV 394 (844)
T ss_dssp CCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CSSCCSCSEEEEESCCCC
T ss_pred CCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-ccCCCCcchhccCCCCcc
Confidence 9998888899999999999999999988878888889999999999999874 333222334555666555
No 43
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=352.81 Aligned_cols=344 Identities=23% Similarity=0.192 Sum_probs=308.5
Q ss_pred CcceeEeCC----------CCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCC
Q 041034 27 NWVGITCDY----------KGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWN 96 (701)
Q Consensus 27 ~w~gv~c~~----------~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 96 (701)
.|..|.|.. ...++.|+|+++.+++ ++...|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccce-ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 467788863 2478899999999986 44557899999999999999999999999999999999999999
Q ss_pred cCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCc
Q 041034 97 NLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPS 176 (701)
Q Consensus 97 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 176 (701)
++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|.++++|+.|+|++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 99988778899999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred ccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcc
Q 041034 177 TLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSAL 256 (701)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 256 (701)
.+..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+.+|.......+|++|+|++|++++..+..+..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 89999999999999999999888899999999999999999988888888778899999999999998655688999999
Q ss_pred cEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCC
Q 041034 257 AELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHN 336 (701)
Q Consensus 257 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 336 (701)
+.|+|++|.|++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 99999999999998899999999999999999999999999999999999999999999877778899999999999999
Q ss_pred ccCCCCCccccccccCCeEEcccccCcccCCCCccc
Q 041034 337 SLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP 372 (701)
Q Consensus 337 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~ 372 (701)
++.+.-+. .+-...+..+.+.++...+.-|..+..
T Consensus 331 ~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p~~~~g 365 (477)
T 2id5_A 331 PLACDCRL-LWVFRRRWRLNFNRQQPTCATPEFVQG 365 (477)
T ss_dssp CEECSGGG-HHHHTTTTSSCCTTCCCBEEESGGGTT
T ss_pred CccCccch-HhHHhhhhccccCccCceeCCchHHcC
Confidence 99865332 122233445667777777777765543
No 44
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.2e-39 Score=357.56 Aligned_cols=200 Identities=24% Similarity=0.312 Sum_probs=171.2
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCcc---ChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETE---DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
.++|++.+.||+|+||+||+|+. .+|+.||||++.+.... ..........++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 47899999999999999999965 46999999999754321 122223334557778888999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
|+|||||+||+|.+++.+.. .+++..+..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 99999999999999998754 599999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCCCCC
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKPKSR 658 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P~~R 658 (701)
+... .....+||+.|||||++.. ..++.++ ||||+||++|+|+.+.|..+
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~v--DiWSLGvilYEmLtG~~PF~ 392 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSA--DWFSLGCMLFKLLRGHSPFR 392 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHH--HHHHHHHHHHHHHHSSCTTC
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHH--HHHHHHHHHHHHHhCCCCCC
Confidence 7533 2344689999999999864 5677766 99999999999999987653
No 45
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.9e-38 Score=360.56 Aligned_cols=334 Identities=21% Similarity=0.184 Sum_probs=284.9
Q ss_pred CCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceee
Q 041034 61 FPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELY 140 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 140 (701)
+++++.|++++|.+....+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 57889999999999877777788999999999999999988888999999999999999999998888899999999999
Q ss_pred cccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccC
Q 041034 141 LRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTG 220 (701)
Q Consensus 141 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 220 (701)
|++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++. .++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 999999988888889999999999999999999998999999999999999999875 35667889999999998875
Q ss_pred CccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccC
Q 041034 221 AIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGK 300 (701)
Q Consensus 221 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 300 (701)
. ...++|+.|++++|.+....+.. .++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..
T Consensus 207 l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 L-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp E-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 3 34568999999999998754332 36899999999999874 67889999999999999999988999999
Q ss_pred ccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCcc-cccccccc
Q 041034 301 LFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLH-PMFLDMSF 379 (701)
Q Consensus 301 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~-~~~l~ls~ 379 (701)
+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..++.+++|+.|+|++|++++.-+..+. ...|++++
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~ 354 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSH 354 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCS
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeC
Confidence 9999999999999985 6777788999999999999998 6888889999999999999999865333332 24799999
Q ss_pred CCCCCcC-CCcCCCCCCCCcCCCccccccee
Q 041034 380 NNLEGEI-PTYLRDNPPNSFVGNKGLCGHVQ 409 (701)
Q Consensus 380 N~l~g~~-p~~~~~~~~~~~~~~~~~~~~~~ 409 (701)
|++++.. +.++...+...+.++...|+...
T Consensus 355 N~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 355 NDWDCNSLRALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp SCEEHHHHHHHTTTCCTTTBCCCCCCCCTTC
T ss_pred CCCCChhHHHHHHHHhhhccccccccCCcch
Confidence 9998753 33445556666777888887644
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.2e-39 Score=358.18 Aligned_cols=210 Identities=23% Similarity=0.367 Sum_probs=177.7
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||+||+|.. .+|+.||+|++..... ...+.+.+|+.+|+.++||||+++++++.+++.+|+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch---hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999955 5799999999976442 2346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC--CCeEEEeecCcccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN--LEAFVADFGTARLL 605 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~--~~~kL~DFGla~~~ 605 (701)
||||+||+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCTTS--CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 999999999999965432 589999999999999999999999 99999999999999854 89999999999987
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHHHhh
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQELE 669 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~~l~ 669 (701)
... ......+||+.|||||++.+.+++..+ ||||+||++|+|+.+.|. .-.+..++++.+.
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~--DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~ 369 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHH--HHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHH--HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 533 334456899999999999999888776 999999999986666532 3334444444443
No 47
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=360.64 Aligned_cols=349 Identities=22% Similarity=0.248 Sum_probs=291.6
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.|++++|.+++ ++...|+.+++|++|+|++|.+++..|..|+.+++|++|+|++|++++..+..|+++++|++|+
T Consensus 52 ~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 130 (570)
T 2z63_A 52 PELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (570)
T ss_dssp SSCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEE
T ss_pred CCceEEECCCCcCCc-cCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEe
Confidence 478999999999885 4555688999999999999999988888999999999999999999977766799999999999
Q ss_pred CCCCCCCCC-CccccCCccccceeecccccCCCCCcccccCCCCC----cEEEceecccCCCc-----------------
Q 041034 117 LSNNSLHGT-TPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSL----IWLSVMYNTVGGPI----------------- 174 (701)
Q Consensus 117 Ls~N~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L~~N~l~~~~----------------- 174 (701)
|++|.+++. +|..|+++++|++|++++|++++..+..++.+++| ..|++++|.+.+..
T Consensus 131 L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n 210 (570)
T 2z63_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 210 (570)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred cCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccc
Confidence 999999874 68889999999999999998887766666655555 55555555443322
Q ss_pred ----------------------------------------------------------------CcccccccccceeEee
Q 041034 175 ----------------------------------------------------------------PSTLFRLTNLERLFLG 190 (701)
Q Consensus 175 ----------------------------------------------------------------~~~~~~l~~L~~L~L~ 190 (701)
|..+..+++|+.|+++
T Consensus 211 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~ 290 (570)
T 2z63_A 211 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLV 290 (570)
T ss_dssp CSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEE
T ss_pred cccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEec
Confidence 2333344555556555
Q ss_pred ecccCCCCCCCC------------------------------------------CCccccCccccccccccCCc--cccc
Q 041034 191 CNQFNGTIPREI------------------------------------------GNLKNLTHLSIITNKLTGAI--PSTL 226 (701)
Q Consensus 191 ~N~l~~~~~~~~------------------------------------------~~l~~L~~L~l~~N~l~~~~--p~~l 226 (701)
+|.+++ +|..+ ..+++|++|++++|++++.. |..+
T Consensus 291 ~~~l~~-l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 369 (570)
T 2z63_A 291 SVTIER-VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSD 369 (570)
T ss_dssp SCEECS-CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHH
T ss_pred Cccchh-hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccc
Confidence 555542 23222 45788999999999998654 7788
Q ss_pred cCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccC-cccCCCCCCcEEEccCccCCCCCcccccCcccee
Q 041034 227 GHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIP-DELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLV 305 (701)
Q Consensus 227 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 305 (701)
..+++|++|++++|.+.+..+. +..+++|+.|++++|.+++..| ..+..+++|+.|++++|.+++..|..+..+++|+
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 448 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 448 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred cccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCc
Confidence 9999999999999999985554 8999999999999999998776 5789999999999999999999999999999999
Q ss_pred eecCCCCcCC-CCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCccc----cccccccC
Q 041034 306 SLDLSKNKLS-GSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP----MFLDMSFN 380 (701)
Q Consensus 306 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~----~~l~ls~N 380 (701)
.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..++.+++|+.|++++|++++..|..+.. ..+++++|
T Consensus 449 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 528 (570)
T 2z63_A 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528 (570)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCC
Confidence 9999999998 679999999999999999999999988999999999999999999999887766543 47999999
Q ss_pred CCCCcCCC
Q 041034 381 NLEGEIPT 388 (701)
Q Consensus 381 ~l~g~~p~ 388 (701)
+++|..|.
T Consensus 529 ~~~~~~~~ 536 (570)
T 2z63_A 529 PWDCSCPR 536 (570)
T ss_dssp CBCCCTTT
T ss_pred cccCCCcc
Confidence 99998774
No 48
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.9e-38 Score=358.71 Aligned_cols=347 Identities=27% Similarity=0.284 Sum_probs=234.9
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
..++.|+|++|.+++ +++..|+.+++|++|+|++|+|+++.|.+|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~~-l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCCC-CCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 478999999999984 6666899999999999999999998889999999999999999999988888999999999999
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCC-CcccccCCCCCcEEEceecccCCCcCccccccc-------------
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGV-LPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLT------------- 182 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------------- 182 (701)
|++|++++..+..|+++++|++|+|++|++++. .|..++.+++|++|+|++|++++..+..+..+.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 999999998888999999999999999999864 688899999999999999998776554443222
Q ss_pred --------------------------------------------------------------------------------
Q 041034 183 -------------------------------------------------------------------------------- 182 (701)
Q Consensus 183 -------------------------------------------------------------------------------- 182 (701)
T Consensus 211 n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 211 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred CcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence
Q ss_pred --------------------------------------ccceeEeeecccCCCCCC-------------------CCCCc
Q 041034 183 --------------------------------------NLERLFLGCNQFNGTIPR-------------------EIGNL 205 (701)
Q Consensus 183 --------------------------------------~L~~L~L~~N~l~~~~~~-------------------~~~~l 205 (701)
+|+.|++.+|.+.+..+. ....+
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l 370 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 370 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC
T ss_pred hcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc
Confidence 122333333333322111 12245
Q ss_pred cccCccccccccccC--CccccccCCCcccEEEeccCCC-----------------------CCCCC-cccCCCCcccEE
Q 041034 206 KNLTHLSIITNKLTG--AIPSTLGHLTSLLYLDLSFNQL-----------------------HSFIP-LEIGNFSALAEL 259 (701)
Q Consensus 206 ~~L~~L~l~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l-----------------------~~~~~-~~~~~~~~L~~L 259 (701)
++|+.|++++|.+.. ..+..+..+.+|++++++.|.+ ....+ ..+..+++++.+
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccc
Confidence 677888888887743 2333333444444444444444 33322 234455555555
Q ss_pred EcCCCCCccccCcccCCCCCCcEEEccCccC-CCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCcc
Q 041034 260 DLSDNKIRGIIPDELSKLSNLQYLNLSSNLL-SGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSL 338 (701)
Q Consensus 260 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 338 (701)
+++.|.+.+..|..+..+++|+.|+|++|.+ .+..|..+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l 530 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcC
Confidence 5555555555555555555566666655543 223455555555566666666666555555555556666666666666
Q ss_pred CCCCCccccccccCCeEEcccccCcccCCCCccc-----cccccccCCCCC
Q 041034 339 DGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLHP-----MFLDMSFNNLEG 384 (701)
Q Consensus 339 ~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~-----~~l~ls~N~l~g 384 (701)
++..|..|..+++|+.|+|++|+|++..|..+.. .+|++++|++.+
T Consensus 531 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 531 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 5555555555556666666666665555544321 245555555543
No 49
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.6e-38 Score=336.99 Aligned_cols=333 Identities=21% Similarity=0.188 Sum_probs=256.0
Q ss_pred CCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCcccccee
Q 041034 60 CFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL 139 (701)
Q Consensus 60 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 139 (701)
.+++++.|++++|.+....+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|+.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35778888888888876655567888888888888888887777788888888888888888888888888888888888
Q ss_pred ecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCcccccccccc
Q 041034 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLT 219 (701)
Q Consensus 140 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 219 (701)
+|++|+++...+..|.++++|++|++++|.+++..+..+..+++|++|++++|++++. .++.+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 8888888876666678888888888888888888888888888888888888888764 3566778888888888887
Q ss_pred CCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCccccc
Q 041034 220 GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIG 299 (701)
Q Consensus 220 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 299 (701)
+. ...++|++|++++|.+... |.. .+++|+.|++++|.+++. ..+..+++|+.|+|++|.+++..|..+.
T Consensus 200 ~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 200 TL-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp EE-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cc-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 42 3345788888888888774 332 347888888888888864 5678888888888888888887788888
Q ss_pred CccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCcc-ccccccc
Q 041034 300 KLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLH-PMFLDMS 378 (701)
Q Consensus 300 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~-~~~l~ls 378 (701)
.+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++..-...+. ...|+++
T Consensus 270 ~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~ 347 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLS 347 (390)
T ss_dssp TCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECC
T ss_pred ccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcC
Confidence 88888888888888874 5666677888888888888887 6677788888888888888888754222222 2478888
Q ss_pred cCCCCCcCC-CcCCCCCCCCcCCCcccccc
Q 041034 379 FNNLEGEIP-TYLRDNPPNSFVGNKGLCGH 407 (701)
Q Consensus 379 ~N~l~g~~p-~~~~~~~~~~~~~~~~~~~~ 407 (701)
+|++++.-. .+....+...+.++...|..
T Consensus 348 ~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 348 HNDWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp SSCEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred CCCccchhHHHHHHHHHhhcccccCceecc
Confidence 888876422 22233344445555555654
No 50
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4e-37 Score=336.88 Aligned_cols=325 Identities=21% Similarity=0.201 Sum_probs=277.4
Q ss_pred CCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEE
Q 041034 36 KGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVL 115 (701)
Q Consensus 36 ~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 115 (701)
-.+++.|+++++.+++. + .+..+++|++|+|++|.+++. | ++.+++|++|+|++|.+++. | ++++++|++|
T Consensus 41 l~~L~~L~Ls~n~l~~~-~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L 111 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL 111 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred cCCCCEEEccCCCcccC-h--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE
Confidence 35789999999999874 3 588999999999999999975 4 89999999999999999975 3 8999999999
Q ss_pred ECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccC
Q 041034 116 YLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195 (701)
Q Consensus 116 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 195 (701)
+|++|++++. + ++.+++|++|++++|++++. .++++++|++|++++|...+.+ .+..+++|+.|++++|+++
T Consensus 112 ~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~ 183 (457)
T 3bz5_A 112 NCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKIT 183 (457)
T ss_dssp ECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccc
Confidence 9999999974 3 89999999999999999985 3889999999999999766665 4788999999999999999
Q ss_pred CCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccC
Q 041034 196 GTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELS 275 (701)
Q Consensus 196 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~ 275 (701)
+ +| ++.+++|+.|++++|++++. .+..+++|++|++++|++++ +| ++.+++|+.|++++|++++..+..+.
T Consensus 184 ~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~ 254 (457)
T 3bz5_A 184 E-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLS 254 (457)
T ss_dssp C-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCT
T ss_pred e-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCC
Confidence 7 44 88999999999999999975 48899999999999999999 56 88999999999999999987666665
Q ss_pred CCC-------CCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCC--------cccCCCCCCeeeccCCccCC
Q 041034 276 KLS-------NLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPT--------GIGNCTELQHLALNHNSLDG 340 (701)
Q Consensus 276 ~l~-------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~l~~L~~L~L~~N~l~~ 340 (701)
.+. +|+.|++++|.+.+.+| ++.+++|+.|++++|.+.|.+|. .+..+++|+.|++++|++++
T Consensus 255 ~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 255 KLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE 332 (457)
T ss_dssp TCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred CCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc
Confidence 554 56677777777777766 56789999999999998777764 25667899999999999998
Q ss_pred CCCccccccccCCeEEcccccCcccCCCCc----------------cccccccccCCCCCcCCCcCCC
Q 041034 341 TIPPEIGKILLLQNLDLSHNNLSGTIPMTL----------------HPMFLDMSFNNLEGEIPTYLRD 392 (701)
Q Consensus 341 ~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~----------------~~~~l~ls~N~l~g~~p~~~~~ 392 (701)
. + ++.+++|+.|++++|+++| +|..- ....+++++|+++|.||..+.+
T Consensus 333 l-~--l~~l~~L~~L~l~~N~l~~-l~~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 333 L-D--VSHNTKLKSLSCVNAHIQD-FSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp C-C--CTTCTTCSEEECCSSCCCB-CTTGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred c-c--cccCCcCcEEECCCCCCCC-ccccccccccCCcEEecceeeecCccccccCcEEEEcChhHhc
Confidence 4 3 8899999999999999997 33211 1135789999999999876554
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=323.60 Aligned_cols=214 Identities=28% Similarity=0.508 Sum_probs=186.1
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|.. .+++.||+|++... +....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 57899999999999999999965 46899999998653 344567899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++|+|.++++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 999999999999987433 589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCc--------------eeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------
Q 041034 608 DSSNR--------------TLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------ 649 (701)
Q Consensus 608 ~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------ 649 (701)
..... ....||+.|+|||++.+..++.+. ||||+|+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~ 238 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKV--DVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG 238 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHH--HHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc
Confidence 32211 135699999999999888877765 99999999984
Q ss_pred --------------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 --------------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 --------------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+|||+.++++.|+...
T Consensus 239 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 239 FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 77889999999999999988654
No 52
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.2e-38 Score=325.68 Aligned_cols=224 Identities=30% Similarity=0.473 Sum_probs=181.9
Q ss_pred HHHHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC
Q 041034 442 YEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK 521 (701)
Q Consensus 442 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (701)
..++....++|++.+.||+|+||.||+|+. +++.||||++..... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp ---CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred cccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 344445578899999999999999999976 588999999976543 334457889999999999999999999999999
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCcEEEcCCCCeEEEee
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS--IVHRDISSNNILLNSNLEAFVADF 599 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g--ivH~Dlkp~NIll~~~~~~kL~DF 599 (701)
+..++||||+++|+|.+++........+++..+..++.|++.||+|||++ | |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999998765444589999999999999999999998 8 999999999999999999999999
Q ss_pred cCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------------
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------ 649 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------ 649 (701)
|+++.............||+.|+|||++.+..++.+. ||||+|+++|+
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 261 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS--DVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP 261 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTH--HHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCC
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchh--hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC
Confidence 9998665443344456799999999999888887765 99999999985
Q ss_pred -------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 -------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 -------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+|||++++++.|+...
T Consensus 262 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 78888899999999988887543
No 53
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.3e-37 Score=318.92 Aligned_cols=193 Identities=26% Similarity=0.402 Sum_probs=171.5
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.+++.++||||+++++++...+..++
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH---HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 357899999999999999999965 578999999997654433 3668899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++|+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 95 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999999999764 488999999999999999999999 99999999999999999999999999998876
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
..........||+.|+|||++.+..++.+. ||||+|+++|+++.
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~ 211 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKV--DIWSLGIMAIEMIE 211 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHH--HHHHHHHHHHHHHH
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHH--HHHHHHHHHHHHHh
Confidence 555555566899999999999888887765 99999999996443
No 54
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-37 Score=330.47 Aligned_cols=312 Identities=21% Similarity=0.219 Sum_probs=278.2
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
..++.+++.++.++ .++...|..+++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45677888888876 46666678899999999999999988888999999999999999999999899999999999999
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCC
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG 196 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (701)
|++|+++...+..|..+++|++|+|++|++++..|..|.++++|++|++++|.+++. .+..+++|+.|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 999999977777789999999999999999999999999999999999999999876 36678999999999999885
Q ss_pred CCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCC
Q 041034 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSK 276 (701)
Q Consensus 197 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~ 276 (701)
. ...++|++|++++|.++.. |.. ..++|++|++++|.+++. ..+..+++|+.|+|++|.+++..|..|..
T Consensus 201 ~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 L-----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp E-----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred c-----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 3 3346899999999999865 433 347999999999999984 57889999999999999999999999999
Q ss_pred CCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEE
Q 041034 277 LSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLD 356 (701)
Q Consensus 277 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ 356 (701)
+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++.. | +..+++|+.|+
T Consensus 271 l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~ 345 (390)
T 3o6n_A 271 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLT 345 (390)
T ss_dssp CSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEE
T ss_pred cccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEE
Confidence 9999999999999985 5667788999999999999999 6787889999999999999999854 4 67889999999
Q ss_pred cccccCcccCC
Q 041034 357 LSHNNLSGTIP 367 (701)
Q Consensus 357 ls~N~l~g~~p 367 (701)
+++|++++...
T Consensus 346 l~~N~~~~~~~ 356 (390)
T 3o6n_A 346 LSHNDWDCNSL 356 (390)
T ss_dssp CCSSCEEHHHH
T ss_pred cCCCCccchhH
Confidence 99999997643
No 55
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.2e-36 Score=333.28 Aligned_cols=323 Identities=32% Similarity=0.443 Sum_probs=186.1
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.|++.+++++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++..+ +.++++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~--~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID--GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Cc--chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 356777777777663 33 25667778888888887775543 7777888888888888776544 77788888888
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCCCc-------------------ccccCCCCCcEEEceecccCCCcCcc
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP-------------------QEIGNLKSLIWLSVMYNTVGGPIPST 177 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------------~~~~~l~~L~~L~L~~N~l~~~~~~~ 177 (701)
|++|.+++..+ +..+++|++|+|++|.+++... ..+.++++|+.|++++|.+++. ..
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~ 194 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SV 194 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GG
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hh
Confidence 88887776543 7777888888888887775321 1134444555555555554433 22
Q ss_pred cccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCccc
Q 041034 178 LFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALA 257 (701)
Q Consensus 178 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 257 (701)
+..+++|++|++++|++++..| ++.+++|++|++++|++++. ..+..+++|++|++++|.+++..+ +..+++|+
T Consensus 195 l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 268 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLT 268 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCC
Confidence 4455555555555555554433 44455555555555555532 234555555555555555555333 45555555
Q ss_pred EEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCc
Q 041034 258 ELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNS 337 (701)
Q Consensus 258 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 337 (701)
.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|+
T Consensus 269 ~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 269 ELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSC
T ss_pred EEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCc
Confidence 55555555554332 5555555555555555554333 4455555555555555554443 4555555555555555
Q ss_pred cCCCCCccccccccCCeEEcccccCcccCCCCc--cccccccccCCCCC
Q 041034 338 LDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTL--HPMFLDMSFNNLEG 384 (701)
Q Consensus 338 l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~--~~~~l~ls~N~l~g 384 (701)
+++. ..++.+++|+.|++++|++++..|..- ....+++++|++++
T Consensus 343 l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 343 VSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEEC
T ss_pred cCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCcccC
Confidence 5543 345555555555555555555554111 11245555555554
No 56
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-37 Score=325.71 Aligned_cols=234 Identities=35% Similarity=0.647 Sum_probs=199.8
Q ss_pred CCcccHHHHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeee
Q 041034 437 DGKILYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYG 516 (701)
Q Consensus 437 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 516 (701)
...++++++....++|++.+.||+|+||.||+|...+++.||||++........ ...+.+|+.+++.++||||+++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C--CCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH--HHHHHHHHHHHHhccCCCccceEE
Confidence 346788999999999999999999999999999887899999999986543221 236889999999999999999999
Q ss_pred eeeeCcEEEEEEEccCCCCHHHHHhcCCC-ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeE
Q 041034 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDE-AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAF 595 (701)
Q Consensus 517 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~k 595 (701)
++.+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+++.+||+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999987542 33589999999999999999999998777999999999999999999999
Q ss_pred EEeecCccccccCCCC-ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------------------
Q 041034 596 VADFGTARLLHVDSSN-RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------- 649 (701)
Q Consensus 596 L~DFGla~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------- 649 (701)
|+|||+++........ .....||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKT--DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHH--HHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccc--cchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 9999999876533332 3334599999999998777776665 99999999884
Q ss_pred -----------------------------------cccCCCCCCCCHHHHHHHhhcCCCc
Q 041034 650 -----------------------------------CLRSKPKSRPTMQRISQELEGKTPM 674 (701)
Q Consensus 650 -----------------------------------cl~~~P~~Rpt~~~i~~~l~~~~~~ 674 (701)
|+..+|.+|||++|+++.|++....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 6677899999999999999875543
No 57
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-36 Score=345.82 Aligned_cols=311 Identities=21% Similarity=0.215 Sum_probs=278.6
Q ss_pred CEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEEC
Q 041034 38 SITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYL 117 (701)
Q Consensus 38 ~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 117 (701)
.+..+++.++.++ .++...|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 52 ~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 52 NQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 4567778888776 456666788999999999999999998989999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCC
Q 041034 118 SNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGT 197 (701)
Q Consensus 118 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 197 (701)
++|.+++..+..|..+++|++|+|++|.+++..|..|+++++|+.|+|++|.+++.. +..+++|+.|++++|.+++.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc
Confidence 999999887778899999999999999999999999999999999999999998763 56678999999999999853
Q ss_pred CCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCC
Q 041034 198 IPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKL 277 (701)
Q Consensus 198 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l 277 (701)
...++|+.|++++|.++...+. + .++|+.|+|++|.+++. ..+..+++|+.|+|++|.|++..|..|..+
T Consensus 208 -----~~~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 277 (597)
T 3oja_B 208 -----AIPIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKM 277 (597)
T ss_dssp -----ECCTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTC
T ss_pred -----cCCchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCc
Confidence 3456899999999999854333 2 36899999999999983 678999999999999999999999999999
Q ss_pred CCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEc
Q 041034 278 SNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDL 357 (701)
Q Consensus 278 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l 357 (701)
++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++. | +..+++|+.|+|
T Consensus 278 ~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l 352 (597)
T 3oja_B 278 QRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTL 352 (597)
T ss_dssp SSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEEC
T ss_pred cCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEe
Confidence 999999999999996 5777788999999999999999 6888899999999999999999854 3 677889999999
Q ss_pred ccccCcccCC
Q 041034 358 SHNNLSGTIP 367 (701)
Q Consensus 358 s~N~l~g~~p 367 (701)
++|+++|..+
T Consensus 353 ~~N~~~~~~~ 362 (597)
T 3oja_B 353 SHNDWDCNSL 362 (597)
T ss_dssp CSSCEEHHHH
T ss_pred eCCCCCChhH
Confidence 9999998654
No 58
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-36 Score=314.30 Aligned_cols=196 Identities=27% Similarity=0.394 Sum_probs=168.2
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 57899999999999999999965 46899999999876666666678899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 99999999999997654 589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCC-CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 608 DSS-NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 608 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
... ......||+.|+|||++.+..++.+. ||||+|+++|++++
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~~l~~ll~ 207 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECT--DIYSIGIVLYEMLV 207 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTH--HHHHHHHHHHHHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchH--hHHHHHHHHHHHHh
Confidence 322 23345699999999999888877765 99999999996443
No 59
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.5e-37 Score=321.26 Aligned_cols=198 Identities=24% Similarity=0.325 Sum_probs=172.7
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999999654 6999999999764322222346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+....
T Consensus 84 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 99999999999997644 589999999999999999999999 999999999999999999999999999987544
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
........+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~ 202 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAV--DWWGLGVVMYEMMCGR 202 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTH--HHHHHHHHHHHHHHSS
T ss_pred CCCcccccccChhhCChhhhcCCCCCchh--hcccchhHHHHHhcCC
Confidence 44445566899999999999888887776 9999999999866655
No 60
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.7e-37 Score=321.23 Aligned_cols=194 Identities=23% Similarity=0.406 Sum_probs=169.5
Q ss_pred hhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
...++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..|
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 3467899999999999999999965 5799999999976543 2344577889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+|+..
T Consensus 91 lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp EEECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EEEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 9999999999999997654 589999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
... .......||+.|+|||++.+..+... ..||||+|+++++
T Consensus 165 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~-~~DiwslG~il~e 206 (328)
T 3fe3_A 165 TVG-GKLDAFCGAPPYAAPELFQGKKYDGP-EVDVWSLGVILYT 206 (328)
T ss_dssp SSS-CGGGTTSSSGGGCCHHHHHTCCCCSH-HHHHHHHHHHHHH
T ss_pred CCC-CccccccCCcceeCcccccCCCcCCc-hhhhhhhHHHHHH
Confidence 533 23445679999999999988776532 2499999999996
No 61
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.5e-36 Score=344.07 Aligned_cols=345 Identities=24% Similarity=0.258 Sum_probs=279.9
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
+++++|||++|+|+++.+..|.++++|++|||++|+|+++.|++|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47999999999999888889999999999999999999988999999999999999999999888889999999999999
Q ss_pred ccccCCCCCcccccCCCCCcEEEceecccCCC-cCcccccccccceeEeeecccCCCCCCCCCCcc--------------
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGP-IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLK-------------- 206 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-------------- 206 (701)
++|++++..+..|+++++|++|+|++|.+.+. .|..+..+++|++|+|++|++++..+..+..+.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 99999999888999999999999999999764 678889999999999999998866554432221
Q ss_pred --------------------------------------------------------------------------------
Q 041034 207 -------------------------------------------------------------------------------- 206 (701)
Q Consensus 207 -------------------------------------------------------------------------------- 206 (701)
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence
Q ss_pred -------------------------------------ccCccccccccccCCccc-------------------cccCCC
Q 041034 207 -------------------------------------NLTHLSIITNKLTGAIPS-------------------TLGHLT 230 (701)
Q Consensus 207 -------------------------------------~L~~L~l~~N~l~~~~p~-------------------~l~~l~ 230 (701)
+|+.|++.+|.+.+..+. ....++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 122233333333221111 122467
Q ss_pred cccEEEeccCCCCCC--CC-----------------------cccCCCCcccEEEcCCCCCccccC-cccCCCCCCcEEE
Q 041034 231 SLLYLDLSFNQLHSF--IP-----------------------LEIGNFSALAELDLSDNKIRGIIP-DELSKLSNLQYLN 284 (701)
Q Consensus 231 ~L~~L~L~~N~l~~~--~~-----------------------~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ 284 (701)
+|+.|++++|.+... .+ ..+..+++|+.++++.|++....+ ..+..+++++.++
T Consensus 372 ~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred ccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccc
Confidence 889999999988642 12 223455667777777666654433 4577888999999
Q ss_pred ccCccCCCCCcccccCccceeeecCCCCcC-CCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCc
Q 041034 285 LSSNLLSGQIPFAIGKLFNLVSLDLSKNKL-SGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLS 363 (701)
Q Consensus 285 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 363 (701)
++.|.+.+..+..+..+++|+.|+|++|++ .+..|..+..+++|+.|+|++|+|++..|..|+.+++|++|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 999999988888999999999999999985 4467889999999999999999999999999999999999999999999
Q ss_pred ccCCCCccc----cccccccCCCCCcCCCcCCCCCC----CCcCCCccccc
Q 041034 364 GTIPMTLHP----MFLDMSFNNLEGEIPTYLRDNPP----NSFVGNKGLCG 406 (701)
Q Consensus 364 g~~p~~~~~----~~l~ls~N~l~g~~p~~~~~~~~----~~~~~~~~~~~ 406 (701)
+..|..+.. .+||+++|++++..|..+...+. -...+|+-.|.
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 887766543 48999999999999988765532 13455665554
No 62
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.5e-36 Score=315.89 Aligned_cols=205 Identities=25% Similarity=0.374 Sum_probs=176.3
Q ss_pred CcccHHHHHhhhcC----------CccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC
Q 041034 438 GKILYEDLINATED----------FHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV 506 (701)
Q Consensus 438 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l 506 (701)
+.++++++..+++. |...+.||+|+||.||+|... +|+.||||++....... .+.+.+|+.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~---~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR---RELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCS---HHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhH---HHHHHHHHHHHHhC
Confidence 34566776666553 777889999999999999765 79999999997654333 36788999999999
Q ss_pred CCCceeeeeeeeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcE
Q 041034 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNI 586 (701)
Q Consensus 507 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NI 586 (701)
+||||+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 9999999999999999999999999999999998753 489999999999999999999999 999999999999
Q ss_pred EEcCCCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 587 LLNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 587 ll~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
+++.++.+||+|||+++.............||+.|+|||.+.+..++.+. ||||+|+++++++.+.
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Dv~slG~il~el~~g~ 238 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEV--DIWSLGIMVIEMVDGE 238 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSS
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchh--hHHHHHHHHHHHHhCC
Confidence 99999999999999998776554445556799999999999888777665 9999999999755544
No 63
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=323.43 Aligned_cols=193 Identities=22% Similarity=0.374 Sum_probs=159.7
Q ss_pred hhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
...++|++.+.||+|+||.||+|.. .+|+.||||++....... ..+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 4568899999999999999999965 579999999997755332 2356889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|...
T Consensus 85 lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 9999999999999997654 589999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCC-CCceeecccccccCCCCCCCCcC-ChhhHHHHHHHHHHHHH
Q 041034 606 HVDS-SNRTLRAGTYGYIAPDQRLSPPV-NQKIIQDIILVSTTALA 649 (701)
Q Consensus 606 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~Di~slg~i~~~ 649 (701)
.... .......||+.|+|||++.+..+ +.+ .||||+|+++++
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--~DiwSlG~il~e 202 (347)
T 3zgw_A 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE--ADVWSMGILLYV 202 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCH--HHHHHHHHHHHH
T ss_pred cCCCCccccccCCccCccCHHHHcCCCCCCcH--hHHHHHHHHHHH
Confidence 4332 22344579999999999987765 444 499999999986
No 64
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.6e-36 Score=318.97 Aligned_cols=198 Identities=24% Similarity=0.389 Sum_probs=167.3
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc-----
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR----- 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 522 (701)
.++|++.+.||+|+||.||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE--LAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTT--THHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 467999999999999999999665 7999999999765432 23578899999999999999999999986543
Q ss_pred ----------------------------------------------------EEEEEEEccCCCCHHHHHhcCCCccCCC
Q 041034 523 ----------------------------------------------------CMFFIYEYMERGSLFYVLRDDDEAIELN 550 (701)
Q Consensus 523 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~ 550 (701)
..++||||+++++|.+++.........+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 3899999999999999998876655678
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccCCC------------Cceeeccc
Q 041034 551 WTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVDSS------------NRTLRAGT 618 (701)
Q Consensus 551 ~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~------------~~~~~~gt 618 (701)
+..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....... ......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 888999999999999999999 999999999999999999999999999987754321 22334699
Q ss_pred ccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccC
Q 041034 619 YGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 619 ~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~ 653 (701)
+.|+|||++.+..++.+. ||||+|+++++++.+
T Consensus 240 ~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~~ 272 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKV--DIFSLGLILFELLYS 272 (332)
T ss_dssp GGGSCHHHHHCCCCCTHH--HHHHHHHHHHHHHSC
T ss_pred cCccChHHhcCCCCcchh--hHHHHHHHHHHHHHc
Confidence 999999999888777665 999999999975554
No 65
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.1e-37 Score=322.13 Aligned_cols=203 Identities=35% Similarity=0.591 Sum_probs=173.6
Q ss_pred cccHHHHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeee
Q 041034 439 KILYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFC 518 (701)
Q Consensus 439 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 518 (701)
++.+.++....++|++.+.||+|+||.||+|...+++.||||++...... ..+.+.+|+.+++.++||||+++++++
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ---GIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSS---HHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChH---HHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34455666788999999999999999999999888999999998765432 257789999999999999999999999
Q ss_pred eeCcEEEEEEEccCCCCHHHHHhcCCC-ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEE
Q 041034 519 LHKRCMFFIYEYMERGSLFYVLRDDDE-AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVA 597 (701)
Q Consensus 519 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~ 597 (701)
.+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 181 (321)
T 2qkw_B 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKIT 181 (321)
T ss_dssp CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEEC
T ss_pred cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEe
Confidence 999999999999999999999876432 23589999999999999999999999 99999999999999999999999
Q ss_pred eecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 598 DFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 598 DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
|||+++....... ......||+.|+|||++.+..++.+. ||||+|+++++
T Consensus 182 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~e 233 (321)
T 2qkw_B 182 DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKS--DVYSFGVVLFE 233 (321)
T ss_dssp CCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHH--HHHHHHHHHHH
T ss_pred ecccccccccccccccccccCCCccccCHHHhcCCCCCccc--chHhHHHHHHH
Confidence 9999986543221 22344689999999998877777665 99999999885
No 66
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-35 Score=313.84 Aligned_cols=303 Identities=27% Similarity=0.426 Sum_probs=180.8
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.+++.++.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|+|++|.+++. +.|.++++|++|+
T Consensus 44 ~~L~~L~l~~~~i~~-~~--~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ--GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELY 116 (347)
T ss_dssp TTCSEEECCSSCCCC-CT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEE
T ss_pred ccccEEEEeCCcccc-ch--hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEE
Confidence 355666666666543 22 25556666666666666664322 66666666666666666642 2466666666666
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCC
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG 196 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (701)
|++|++++..+ +..+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 66666664433 56666666666666654433332 6666666666666666655433 5566666666666666654
Q ss_pred CCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCC
Q 041034 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSK 276 (701)
Q Consensus 197 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~ 276 (701)
..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++. +.+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 332 5566666666666666664433 5566666666666666665433 55666666666666666643 34566
Q ss_pred CCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEE
Q 041034 277 LSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLD 356 (701)
Q Consensus 277 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ 356 (701)
+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 66666666666666643 245566666666666666666666666666666666666666665444 55666666666
Q ss_pred cccccCc
Q 041034 357 LSHNNLS 363 (701)
Q Consensus 357 ls~N~l~ 363 (701)
+++|+++
T Consensus 340 l~~N~i~ 346 (347)
T 4fmz_A 340 FANQVIK 346 (347)
T ss_dssp SSCC---
T ss_pred hhhhccc
Confidence 6666654
No 67
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-35 Score=327.52 Aligned_cols=307 Identities=30% Similarity=0.446 Sum_probs=269.7
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
.+++.|++++|.+++..+ +..+++|++|++++|.+++..+ ++++++|++|+|++|.+++..+ +.++++|++|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 140 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP---LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 140 (466)
T ss_dssp TTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCEEECCCCccCCchh---hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEE
Confidence 578999999999886533 8889999999999999987655 8999999999999999986643 88999999999
Q ss_pred CCCCCCCCCCc-------------------cccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcc
Q 041034 117 LSNNSLHGTTP-------------------IEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPST 177 (701)
Q Consensus 117 Ls~N~l~~~~~-------------------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 177 (701)
|++|.+++... ..+..+++|++|++++|.+++. ..+..+++|++|++++|.+.+..|
T Consensus 141 l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 216 (466)
T 1o6v_A 141 LSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-- 216 (466)
T ss_dssp EEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--
Confidence 99998875421 1367788999999999999875 358999999999999999998766
Q ss_pred cccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCccc
Q 041034 178 LFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALA 257 (701)
Q Consensus 178 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 257 (701)
+..+++|+.|++++|++++. ..+..+++|++|++++|.+++..| +..+++|++|++++|.+++..+ +..+++|+
T Consensus 217 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 290 (466)
T 1o6v_A 217 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 290 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccC
Confidence 78899999999999999864 468899999999999999997765 8899999999999999998654 88999999
Q ss_pred EEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCc
Q 041034 258 ELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNS 337 (701)
Q Consensus 258 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 337 (701)
.|+|++|++++..| +..+++|+.|+|++|.+++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|+
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCc
Confidence 99999999997655 8899999999999999998776 78899999999999999975 478999999999999999
Q ss_pred cCCCCCccccccccCCeEEcccccCcccCCCC
Q 041034 338 LDGTIPPEIGKILLLQNLDLSHNNLSGTIPMT 369 (701)
Q Consensus 338 l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 369 (701)
+++..| +..+++|+.|++++|++++ +|..
T Consensus 365 l~~~~~--~~~l~~L~~L~l~~n~~~~-~p~~ 393 (466)
T 1o6v_A 365 ISDLTP--LANLTRITQLGLNDQAWTN-APVN 393 (466)
T ss_dssp CCBCGG--GTTCTTCCEEECCCEEEEC-CCBC
T ss_pred cCccch--hhcCCCCCEEeccCCcccC-Cchh
Confidence 998877 8899999999999999997 3543
No 68
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.2e-36 Score=317.18 Aligned_cols=197 Identities=22% Similarity=0.334 Sum_probs=169.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccC---hHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETED---SAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
..++|++.+.||+|+||.||+|... +|+.||+|+++...... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4578999999999999999999654 69999999998754321 1124678999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC----CeEEEee
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL----EAFVADF 599 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~----~~kL~DF 599 (701)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999997644 589999999999999999999999 999999999999998776 7999999
Q ss_pred cCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccC
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~ 653 (701)
|+++..... .......||+.|+|||++.+..++.+. ||||+|+++|+++.+
T Consensus 164 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslGvil~~ll~g 214 (361)
T 2yab_A 164 GLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEA--DMWSIGVITYILLSG 214 (361)
T ss_dssp SSCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHS
T ss_pred CCceEcCCC-CccccCCCCccEECchHHcCCCCCccc--cHHHHHHHHHHHHhC
Confidence 999876543 233445799999999999888887765 999999999964433
No 69
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=326.47 Aligned_cols=194 Identities=21% Similarity=0.316 Sum_probs=168.9
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 467899999999999999999954 57999999999876543 2335678999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc---CCCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN---SNLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~---~~~~~kL~DFGla~ 603 (701)
||||+++|+|.+.+.... .+++..+..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||+|+
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999988754 589999999999999999999999 999999999999998 46789999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHc
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALAC 650 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~c 650 (701)
.............||+.|+|||++.+..++.+. ||||+|+++|++
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~--DIwSlGvilyel 206 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPV--DLWACGVILYIL 206 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHH
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCcc--ccHHHHHHHHHH
Confidence 776554444556899999999999888887765 999999999863
No 70
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.8e-36 Score=321.75 Aligned_cols=197 Identities=22% Similarity=0.380 Sum_probs=167.3
Q ss_pred hhcCCccceEEeeccceEEEEEEc--------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeee
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFC 518 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 518 (701)
..++|++.+.||+|+||.||+|.. .++..||||+++... .....+.+.+|+.+++.+ +||||+++++++
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 357899999999999999999964 235679999997653 234467899999999999 899999999999
Q ss_pred eeCcEEEEEEEccCCCCHHHHHhcCCC-------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCc
Q 041034 519 LHKRCMFFIYEYMERGSLFYVLRDDDE-------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNN 585 (701)
Q Consensus 519 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~N 585 (701)
.+.+..|+||||+++|+|.+++..... ...+++..+..++.||+.||+|||++ ||+||||||+|
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 233 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 233 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence 999999999999999999999986531 12488999999999999999999999 99999999999
Q ss_pred EEEcCCCCeEEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 586 ILLNSNLEAFVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 586 Ill~~~~~~kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
|+++.++.+||+|||+|+....... ......+|+.|+|||++.+..++.+. ||||+|+++|+++
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--DvwslG~il~ell 299 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS--DVWSFGVLMWEIF 299 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHH--HHHHHHHHHHHHH
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHH--HHHHHHHHHHHHH
Confidence 9999999999999999987643322 22334578899999999888877775 9999999999633
No 71
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.7e-36 Score=322.90 Aligned_cols=201 Identities=22% Similarity=0.357 Sum_probs=175.1
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.........+.+.+|..++.++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 568999999999999999999654 6889999999876544444446678899999887 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999997654 589999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
.........+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.|..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~--DiwslGvllyell~G~~Pf 253 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSV--DWWALGVLMFEMMAGRSPF 253 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSSCSS
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHH--HHHHHHHHHHHHHhCCCCC
Confidence 444455567899999999999988887765 9999999999999887543
No 72
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=317.60 Aligned_cols=216 Identities=28% Similarity=0.421 Sum_probs=180.6
Q ss_pred hcCCccceEEeeccceEEEEEEcC----CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP----DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
.++|++.+.||+|+||.||+|... .+..||||+++.... ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT--ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 467999999999999999999663 345699999986532 34457899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.++++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 999999999999999976432 589999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCCc---eeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 605 LHVDSSNR---TLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 605 ~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
........ ....+|+.|+|||++.+..++.+. ||||+|+++++
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSAS--DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMG 278 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHH--HHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTT
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHH--HHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCC
Confidence 75432221 223457789999999877777665 99999999985
Q ss_pred -----------cccCCCCCCCCHHHHHHHhhcCCC
Q 041034 650 -----------CLRSKPKSRPTMQRISQELEGKTP 673 (701)
Q Consensus 650 -----------cl~~~P~~Rpt~~~i~~~l~~~~~ 673 (701)
||..+|.+||++.++++.|+....
T Consensus 279 ~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 667788888888888888776543
No 73
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2e-36 Score=308.24 Aligned_cols=216 Identities=23% Similarity=0.391 Sum_probs=183.6
Q ss_pred hhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
...++|++.+.||+|+||.||+|+..+++.||+|+++..... .+++.+|+.++++++||||+++++++.+....++
T Consensus 5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (268)
T 3sxs_A 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYI 80 (268)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEE
Confidence 346789999999999999999998888889999999865443 2668899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.++...
T Consensus 81 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 81 VTEYISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp EEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred EEEccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 9999999999999976432 589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCC-ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------------------
Q 041034 607 VDSSN-RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------------ 649 (701)
Q Consensus 607 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------------ 649 (701)
..... .....+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (268)
T 3sxs_A 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS--DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDT 233 (268)
T ss_dssp TTCEEECCSCCCCGGGCCHHHHHHSEEETTH--HHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHH
T ss_pred hhhhhcccCCCcCcccCCHHHHhccCCchhh--hhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHH
Confidence 33211 1223466789999998877777665 99999999985
Q ss_pred -------cccCCCCCCCCHHHHHHHhhcCCC
Q 041034 650 -------CLRSKPKSRPTMQRISQELEGKTP 673 (701)
Q Consensus 650 -------cl~~~P~~Rpt~~~i~~~l~~~~~ 673 (701)
|+..+|.+|||+.++++.|+....
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 666777777777777777776553
No 74
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-36 Score=317.45 Aligned_cols=192 Identities=24% Similarity=0.373 Sum_probs=164.6
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.............+.+|+.+++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999965 57899999998754322222235788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+ +|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 679999887654 589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
.. .....+||+.|+|||++.+..+... ..||||+|+++|+
T Consensus 161 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~-~~DiwslG~il~~ 200 (336)
T 3h4j_B 161 GN-FLKTSCGSPNYAAPEVINGKLYAGP-EVDVWSCGIVLYV 200 (336)
T ss_dssp SB-TTCCCTTSTTTSCGGGSCCSGGGCH-HHHHHHHHHHHHH
T ss_pred Cc-ccccccCCcCcCCHHHHcCCCCCCC-ccchhHHHHHHHH
Confidence 32 3344579999999999987766322 2499999999996
No 75
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.4e-36 Score=314.27 Aligned_cols=201 Identities=22% Similarity=0.358 Sum_probs=177.8
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||.||+|+.. +++.||+|++.+.........+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467999999999999999999664 6899999999876655556667889999999988 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+...
T Consensus 88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 999999999999997644 589999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
.........+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.+..
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~~pf 210 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSV--DWWALGVLMFEMMAGRSPF 210 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSSCTT
T ss_pred CCCCcccccCCCccccCccccCCCCCChHH--hHHHHHHHHHHHHhCCCCc
Confidence 444445556899999999999888777665 9999999999999887543
No 76
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.7e-37 Score=318.90 Aligned_cols=252 Identities=31% Similarity=0.510 Sum_probs=221.0
Q ss_pred CCCEEECcCCcCcc--cCCcccCCCCCCCEEECCC-CCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEE
Q 041034 87 NLKYLNLRWNNLTG--TIPKEIGSLRNLEVLYLSN-NSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWL 163 (701)
Q Consensus 87 ~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 163 (701)
++++|+|++|.+++ .+|..|.++++|++|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45566666666665 5666666666666666663 66666667777777777777777777777778888888888888
Q ss_pred EceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCcc-ccCccccccccccCCccccccCCCcccEEEeccCCC
Q 041034 164 SVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLK-NLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQL 242 (701)
Q Consensus 164 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 242 (701)
+|++|.+++.+|..+..+++|++|+|++|++++.+|..++.++ +|++|++++|++++.+|..+..++ |++|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 8888888899999999999999999999999999999999998 999999999999999999999997 99999999999
Q ss_pred CCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcc
Q 041034 243 HSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGI 322 (701)
Q Consensus 243 ~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 322 (701)
++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|.+++.+|..+..+++|+.|+|++|+++|.+|..
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~- 287 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-
Confidence 999999999999999999999999988776 888999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCeeeccCCc-cCCC
Q 041034 323 GNCTELQHLALNHNS-LDGT 341 (701)
Q Consensus 323 ~~l~~L~~L~L~~N~-l~~~ 341 (701)
..+++|+.|++++|+ +.|.
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp TTGGGSCGGGTCSSSEEEST
T ss_pred ccccccChHHhcCCCCccCC
Confidence 889999999999998 5553
No 77
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-36 Score=312.76 Aligned_cols=193 Identities=25% Similarity=0.322 Sum_probs=167.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 3578999999999999999999654 68899999987543 224668899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC--CCCeEEEeecCccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS--NLEAFVADFGTARL 604 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~--~~~~kL~DFGla~~ 604 (701)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+++.
T Consensus 79 v~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 999999999999997643 2589999999999999999999999 9999999999999987 78999999999987
Q ss_pred cccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
.... .......||+.|+|||++.+..++.+. ||||+|+++|+++.
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~~ll~ 198 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTAT--DMWSLGTLVYVLLS 198 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHH--HHHHHHHHHHHHHH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchh--hHHHHHHHHHHHHh
Confidence 7533 334456799999999999887777665 99999999996433
No 78
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8e-36 Score=310.71 Aligned_cols=200 Identities=28% Similarity=0.441 Sum_probs=169.0
Q ss_pred hhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
...++|++.+.||+|+||+||+|...+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED-EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc-chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 346889999999999999999998888999999999765432 2234678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++ +|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+|+...
T Consensus 97 v~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEECCSE-EHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEcCCCC-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9999986 88888876442 589999999999999999999999 99999999999999999999999999998876
Q ss_pred cCCCCceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHcccCCC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
..........||+.|+|||++.+. .++.+. ||||+|+++++++.+.+
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~~ll~g~~ 218 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSV--DIWSIGCIFAEMITGKP 218 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHH--HHHHHHHHHHHHHHSSC
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchH--HhHHHHHHHHHHHhCCC
Confidence 544445556799999999998763 455554 99999999999988764
No 79
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.9e-36 Score=307.31 Aligned_cols=194 Identities=24% Similarity=0.393 Sum_probs=167.6
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
..++|++.+.||+|+||.||+|...+++.||+|++...... .+++.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 35789999999999999999998878899999999875543 26688999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EECCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEeCCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 999999999999976443 589999999999999999999999 999999999999999999999999999986542
Q ss_pred CC-CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 608 DS-SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 608 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
.. .......+|+.|+|||.+.+..++.+. ||||+|+++++++.
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~~l~~ll~ 202 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKS--DVWSFGVLMWEVFS 202 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHHT
T ss_pred cccccccCcccccccCCHHHhcCCCCCchh--hhHHHHHHHHHHhc
Confidence 21 112233567889999998877777765 99999999996443
No 80
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.1e-35 Score=308.39 Aligned_cols=268 Identities=27% Similarity=0.332 Sum_probs=143.9
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++. +|..+. ++|++|+|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCS-CCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCc-cCcccc--ccCCEEEC
Confidence 445555555555554444455555555555555555554445555555555555555555542 222222 44555555
Q ss_pred ccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccC--CCCCCCCCCccccCcccccccccc
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN--GTIPREIGNLKNLTHLSIITNKLT 219 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l~~N~l~ 219 (701)
++|++++..+..| .++++|+.|++++|.++ +..+..+..+ +|++|++++|+++
T Consensus 131 ~~n~i~~~~~~~~------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 131 HDNRIRKVPKGVF------------------------SGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCCCCCSGGG------------------------SSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCccCccCHhHh------------------------CCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 5555544444444 44455555555555443 2344444444 5555555555555
Q ss_pred CCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCccccc
Q 041034 220 GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIG 299 (701)
Q Consensus 220 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 299 (701)
+ +|..+. ++|++|++++|.+++..+..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|+++ .+|..+.
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 3 333332 45555555555555555555555566666666666665555555555666666666666665 4555555
Q ss_pred CccceeeecCCCCcCCCCCCCcccC------CCCCCeeeccCCccC--CCCCccccccccCCeEEccccc
Q 041034 300 KLFNLVSLDLSKNKLSGSFPTGIGN------CTELQHLALNHNSLD--GTIPPEIGKILLLQNLDLSHNN 361 (701)
Q Consensus 300 ~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~l~ls~N~ 361 (701)
.+++|+.|++++|++++..+..|.. ...|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 5666666666666665444444433 355777777777776 5566677777777777777764
No 81
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=318.10 Aligned_cols=214 Identities=21% Similarity=0.344 Sum_probs=175.2
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|+.. +++.||||++++.........+.+.+|..+++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999654 6899999999765332233356778999999988 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+..
T Consensus 101 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999997654 589999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHHHhh
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQELE 669 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~~l~ 669 (701)
..........+||+.|+|||++.+..++.+. ||||+|+++|+|+.+.+. ...+..++.+.+.
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~ 237 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAV--DWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCcc--CCCcchHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 4444445566899999999998877777665 999999999999998743 3345555444443
No 82
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.9e-35 Score=310.59 Aligned_cols=305 Identities=29% Similarity=0.431 Sum_probs=266.0
Q ss_pred cCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccc
Q 041034 58 FSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137 (701)
Q Consensus 58 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 137 (701)
+..+++|+.|++++|.+.. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.++.. ..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 4567899999999999985 34 48899999999999999996544 99999999999999999864 3699999999
Q ss_pred eeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCcccccccc
Q 041034 138 ELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNK 217 (701)
Q Consensus 138 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 217 (701)
+|+|++|++++..+ +..+++|+.|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|++|++++|.
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 99999999997654 89999999999999976655544 8999999999999999986654 8899999999999999
Q ss_pred ccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCccc
Q 041034 218 LTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFA 297 (701)
Q Consensus 218 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 297 (701)
+++..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++. ..
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~ 260 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NA 260 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GG
T ss_pred cccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hh
Confidence 996544 8899999999999999998655 8889999999999999997654 89999999999999999864 46
Q ss_pred ccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCc--ccccc
Q 041034 298 IGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTL--HPMFL 375 (701)
Q Consensus 298 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~--~~~~l 375 (701)
+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|..++.+++|+.|++++|++++..|... ....+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L 338 (347)
T 4fmz_A 261 VKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSA 338 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEE
T ss_pred HhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhcccee
Confidence 88999999999999999964 468899999999999999999999999999999999999999998877221 12489
Q ss_pred ccccCCCC
Q 041034 376 DMSFNNLE 383 (701)
Q Consensus 376 ~ls~N~l~ 383 (701)
++++|+++
T Consensus 339 ~l~~N~i~ 346 (347)
T 4fmz_A 339 DFANQVIK 346 (347)
T ss_dssp SSSCC---
T ss_pred ehhhhccc
Confidence 99999885
No 83
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.4e-36 Score=318.07 Aligned_cols=196 Identities=20% Similarity=0.341 Sum_probs=166.1
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCcc--ChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETE--DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++...... .....+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999965 46899999998643211 1112467899999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCC-CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC---eEEEeecC
Q 041034 526 FIYEYMERGSLFYVLRDDD-EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE---AFVADFGT 601 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~---~kL~DFGl 601 (701)
+||||+++++|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988876432 223589999999999999999999999 9999999999999986654 99999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
++.............||+.|+|||++.+..++.+. ||||+|+++|+
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~~ 225 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPV--DVWGCGVILFI 225 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHH
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchH--hhHHHHHHHHH
Confidence 98876544444556799999999999888777665 99999999985
No 84
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-35 Score=307.00 Aligned_cols=205 Identities=32% Similarity=0.529 Sum_probs=174.6
Q ss_pred CcccHHHHHhhhcCCccc------eEEeeccceEEEEEEcCCCcEEEEEEecCCCc-cChHHHHHHHHHHHHHhcCCCCc
Q 041034 438 GKILYEDLINATEDFHIR------YCIGTGGYGSVYKAELPDGKVVALKKLHQSET-EDSAFVESFQNEARVLSTVRHRN 510 (701)
Q Consensus 438 ~~~~~~~~~~~~~~y~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~n 510 (701)
..+++.++..++++|... +.||+|+||.||+|.. +++.||||++..... ......+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 467888999999988877 9999999999999987 688999999876432 22334578899999999999999
Q ss_pred eeeeeeeeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC
Q 041034 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS 590 (701)
Q Consensus 511 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~ 590 (701)
|+++++++.+.+..++||||+++++|.+++........+++..+..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997654444699999999999999999999999 9999999999999999
Q ss_pred CCCeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 591 NLEAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 591 ~~~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
++.+||+|||+++........ .....||+.|+|||.+.+. ++.+ .||||+|+++++
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~--~Dv~slG~il~~ 226 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPK--SDIYSFGVVLLE 226 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE-ECTH--HHHHHHHHHHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcCC-CCcc--chhHHHHHHHHH
Confidence 999999999999876433222 2234689999999988653 4444 499999999985
No 85
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=307.62 Aligned_cols=212 Identities=21% Similarity=0.314 Sum_probs=168.4
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccC-----------------------hHHHHHHHHHHHHHh
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETED-----------------------SAFVESFQNEARVLS 504 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~E~~~l~ 504 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++....... ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 47899999999999999999965 468999999997654211 112356889999999
Q ss_pred cCCCCceeeeeeeeee--CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 041034 505 TVRHRNIVKLYGFCLH--KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDIS 582 (701)
Q Consensus 505 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlk 582 (701)
+++||||+++++++.+ .+..++||||+++++|.+++... .+++..+..++.|++.||+|||++ ||+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999986 56899999999999998865432 589999999999999999999999 99999999
Q ss_pred CCcEEEcCCCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCC-hhhHHHHHHHHHHHHHcccCC-CCCCCC
Q 041034 583 SNNILLNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVN-QKIIQDIILVSTTALACLRSK-PKSRPT 660 (701)
Q Consensus 583 p~NIll~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~Di~slg~i~~~cl~~~-P~~Rpt 660 (701)
|+||+++.++.+||+|||+++.............||+.|+|||++.+.... .....||||+|+++++++.+. |.....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 999999999999999999998775444434456799999999998766531 122359999999999988776 333334
Q ss_pred HHHHHHH
Q 041034 661 MQRISQE 667 (701)
Q Consensus 661 ~~~i~~~ 667 (701)
..++...
T Consensus 245 ~~~~~~~ 251 (298)
T 2zv2_A 245 IMCLHSK 251 (298)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444333
No 86
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.2e-35 Score=306.31 Aligned_cols=269 Identities=23% Similarity=0.286 Sum_probs=145.7
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
+.|+.|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|+++. +|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEEC
Confidence 455566666666655555555556666666666666655555555556666666666665552 232222 45555555
Q ss_pred ccccCCCCCcccccCCCCCcEEEceecccCC--CcCcccccccccceeEeeecccCCCCCCCCCCccccCcccccccccc
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGG--PIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLT 219 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 219 (701)
++|++++..+..|.++++|+.|++++|.+.. ..+..+.++++|+.|++++| .++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n------------------------~l~ 184 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT------------------------NIT 184 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSS------------------------CCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCC------------------------ccc
Confidence 5555555555555555555555555555532 33444444444444444444 444
Q ss_pred CCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCccccc
Q 041034 220 GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIG 299 (701)
Q Consensus 220 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 299 (701)
. +|..+. ++|++|++++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.++ .+|..+.
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 2 232222 45555555555555554555555555555555555555555555555555555555555555 4455555
Q ss_pred CccceeeecCCCCcCCCCCCCcccC------CCCCCeeeccCCccCC--CCCccccccccCCeEEccccc
Q 041034 300 KLFNLVSLDLSKNKLSGSFPTGIGN------CTELQHLALNHNSLDG--TIPPEIGKILLLQNLDLSHNN 361 (701)
Q Consensus 300 ~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~l~ls~N~ 361 (701)
.+++|++|++++|++++..+..|.. .+.|+.|++++|.+.. ..|..|..+..++.++|++|+
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 5555666666666655444444432 3566777777777653 455667777777777777764
No 87
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=311.04 Aligned_cols=196 Identities=22% Similarity=0.337 Sum_probs=168.5
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccC---hHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETED---SAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
..++|++.+.||+|+||.||+|... +++.||+|++....... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3567999999999999999999654 68999999997654321 1124678999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC----CeEEEee
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL----EAFVADF 599 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~----~~kL~DF 599 (701)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999997643 589999999999999999999999 999999999999998877 8999999
Q ss_pred cCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
|+++...... ......||+.|+|||++.+..++.+. ||||+|+++++++.
T Consensus 163 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~~ll~ 212 (326)
T 2y0a_A 163 GLAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEA--DMWSIGVITYILLS 212 (326)
T ss_dssp TTCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHH--HHHHHHHHHHHHHH
T ss_pred CCCeECCCCC-ccccccCCcCcCCceeecCCCCCcHH--HHHHHHHHHHHHHH
Confidence 9998765332 23345799999999999888777765 99999999996333
No 88
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6e-35 Score=319.63 Aligned_cols=300 Identities=22% Similarity=0.250 Sum_probs=262.2
Q ss_pred ccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCcccc
Q 041034 57 NFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136 (701)
Q Consensus 57 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 136 (701)
.++.+++|++|++++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++. + ++.+++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 466789999999999999975 5 699999999999999999975 4 89999999999999999975 3 8999999
Q ss_pred ceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccc
Q 041034 137 EELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITN 216 (701)
Q Consensus 137 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 216 (701)
++|+|++|++++. | ++.+++|++|++++|.+++. .+..+++|++|++++|+..+.+ .++.+++|++|++++|
T Consensus 109 ~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 9999999999985 3 89999999999999999985 3888999999999999766666 4889999999999999
Q ss_pred cccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcc
Q 041034 217 KLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPF 296 (701)
Q Consensus 217 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 296 (701)
++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++..+.
T Consensus 181 ~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 181 KITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred ccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 9997 44 88999999999999999985 48899999999999999998 56 88999999999999999987766
Q ss_pred cccCcc-------ceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCcc--------ccccccCCeEEccccc
Q 041034 297 AIGKLF-------NLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPE--------IGKILLLQNLDLSHNN 361 (701)
Q Consensus 297 ~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--------~~~l~~L~~l~ls~N~ 361 (701)
.+.++. +|+.|++++|.+.|.+| ++.+++|+.|+|++|++.+.+|.. +..+++|++|++++|+
T Consensus 252 ~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~ 329 (457)
T 3bz5_A 252 TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTE 329 (457)
T ss_dssp TCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCC
T ss_pred HCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCc
Confidence 666655 56788889998888887 578899999999999987777642 5667899999999999
Q ss_pred CcccCCCCc--cccccccccCCCCC
Q 041034 362 LSGTIPMTL--HPMFLDMSFNNLEG 384 (701)
Q Consensus 362 l~g~~p~~~--~~~~l~ls~N~l~g 384 (701)
|+| +|..- ....||+++|+++|
T Consensus 330 l~~-l~l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 330 LTE-LDVSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CSC-CCCTTCTTCSEEECCSSCCCB
T ss_pred ccc-cccccCCcCcEEECCCCCCCC
Confidence 998 45221 22479999999997
No 89
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=309.33 Aligned_cols=194 Identities=21% Similarity=0.249 Sum_probs=159.1
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||+||+|... +++.||||++......... ......|+..+..+ +||||+++++++.+.+..++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 367999999999999999999665 7999999998765443332 34445555555544 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 135 v~e~~-~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGA--SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 6699998876542 589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~ 653 (701)
... ......||+.|+|||++.+ .++.+ .||||+|+++++++.+
T Consensus 209 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~--~DiwslG~il~el~~g 251 (311)
T 3p1a_A 209 TAG-AGEVQEGDPRYMAPELLQG-SYGTA--ADVFSLGLTILEVACN 251 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTH--HHHHHHHHHHHHHHHT
T ss_pred cCC-CCcccCCCccccCHhHhcC-CCCch--hhHHHHHHHHHHHHhC
Confidence 332 2334569999999999876 45555 4999999999986655
No 90
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.1e-36 Score=318.85 Aligned_cols=215 Identities=27% Similarity=0.429 Sum_probs=175.0
Q ss_pred hcCCccceEEeeccceEEEEEEcC----CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP----DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
.++|++.+.||+|+||.||+|+.. ++..||||+++... .....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 468999999999999999999664 46789999997653 234457899999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.++++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999999999976532 589999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCC---ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 605 LHVDSSN---RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 605 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
....... .....+++.|+|||++.+..++.+. ||||+|+++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~ 274 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS--DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTT
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchh--cHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcc
Confidence 6543221 1122357789999999877777765 99999999985
Q ss_pred -----------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 -----------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 -----------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+||++.++++.|+...
T Consensus 275 ~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp CBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 77789999999999999987654
No 91
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=317.62 Aligned_cols=199 Identities=25% Similarity=0.381 Sum_probs=171.7
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999654 6899999999764322222346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+....
T Consensus 94 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999998654 589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeecccccccCCCCCCCC---cCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSP---PVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
. .......||+.|+|||++... .++.+. ||||+|+++|+|+.+.+.
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~--DiwSlG~il~elltG~~P 216 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAV--DWWSLGVTAYELLRGRRP 216 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTH--HHHHHHHHHHHHHHSSCS
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccc--eeechHHHHHHHHhCCCC
Confidence 3 334456799999999998643 355554 999999999998887643
No 92
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.8e-35 Score=314.31 Aligned_cols=197 Identities=21% Similarity=0.367 Sum_probs=170.3
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 457899999999999999999965 46899999999875443 3345778999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC---CCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN---LEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~---~~~kL~DFGla~ 603 (701)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.+ +.+||+|||+++
T Consensus 106 v~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999987654 589999999999999999999999 99999999999999765 459999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
..... .......||+.|+|||++.+..++.+. ||||+|+++|+++.+.
T Consensus 180 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~~ll~g~ 227 (362)
T 2bdw_A 180 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPV--DIWACGVILYILLVGY 227 (362)
T ss_dssp CCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSS
T ss_pred EecCC-cccccCCCCccccCHHHHccCCCCchh--hHHHHHHHHHHHHHCC
Confidence 76532 233445799999999999888887765 9999999999755554
No 93
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-35 Score=309.43 Aligned_cols=197 Identities=30% Similarity=0.428 Sum_probs=172.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|+.. +|+.||+|++++.........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467999999999999999999654 7999999999764322222346778999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999998654 589999999999999999999999 999999999999999999999999999987542
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
.....+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.+.
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~~p 202 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSI--DWWSFGILIYEMLAGYTP 202 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTH--HHHHHHHHHHHHHHSSCT
T ss_pred ---ccccccCCccccCHhHhcCCCCCccc--chhhhHHHHHHHHhCCCC
Confidence 22345799999999999888887776 999999999998877643
No 94
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-35 Score=316.12 Aligned_cols=199 Identities=28% Similarity=0.394 Sum_probs=165.0
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHH-HhcCCCCceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARV-LSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||.||+|+.. +++.||+|++++...........+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 468999999999999999999664 688999999987654433334566777776 577899999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+...
T Consensus 117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999997644 588999999999999999999999 99999999999999999999999999998754
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
.........+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.+
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~G~~ 237 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTV--DWWCLGAVLYEMLYGLP 237 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSSC
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchh--hhHHHHHHHHHHHcCCC
Confidence 444445566899999999999888887765 99999999999887764
No 95
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.8e-36 Score=311.97 Aligned_cols=194 Identities=25% Similarity=0.367 Sum_probs=163.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||||++......+ ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc--hHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3578999999999999999999654 78999999997654322 23668899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.+.
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999999987654 589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCC--CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHc
Q 041034 607 VDS--SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALAC 650 (701)
Q Consensus 607 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~c 650 (701)
... .......||+.|+|||++.+..+... ..||||+|+++++|
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~DiwslG~il~~l 201 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAM 201 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHH-HHHHHHHHHHHHHH
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCC-cccHHHHHHHHHHH
Confidence 322 22334579999999999877665332 24999999999963
No 96
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.1e-35 Score=314.32 Aligned_cols=196 Identities=23% Similarity=0.317 Sum_probs=171.6
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 468999999999999999999654 6999999999764322222346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+....
T Consensus 120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999998654 589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
. .....||+.|+|||++.+..++.+. |+||+|+++|+|+.+.|
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~~ 236 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAV--DWWALGVLIYEMAAGYP 236 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSSC
T ss_pred C---cccccCCccccCHHHhcCCCCCCcC--CEecccHhHhHHhhCCC
Confidence 2 2345799999999999888777665 99999999998777654
No 97
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-35 Score=311.69 Aligned_cols=215 Identities=25% Similarity=0.395 Sum_probs=179.9
Q ss_pred hhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 524 (701)
...++|++.+.||+|+||.||+|+.. +++.||+|+++..........+.+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34688999999999999999999664 6899999999764321112245678899999876 899999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 99999999999999997644 589999999999999999999999 999999999999999999999999999986
Q ss_pred cccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHHHhh
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQELE 669 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~~l~ 669 (701)
...........+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.+. .-.+..++.+.+.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~ 231 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSV--DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChh--hhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 54444445566899999999999888877665 999999999999998754 3345555554443
No 98
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.5e-36 Score=319.39 Aligned_cols=204 Identities=22% Similarity=0.315 Sum_probs=170.1
Q ss_pred cHHHHHhhhcCCccceEEeeccceEEEEEEc------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceee
Q 041034 441 LYEDLINATEDFHIRYCIGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVK 513 (701)
Q Consensus 441 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 513 (701)
...+++...++|++.+.||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|+++++++ +||||++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC--HHHHHHHHHHHHHHHhhcCCcceee
Confidence 4456667789999999999999999999962 3468899999976543 33357789999999999 7999999
Q ss_pred eeeeeeeCc-EEEEEEEccCCCCHHHHHhcCCC-----------------------------------------------
Q 041034 514 LYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDE----------------------------------------------- 545 (701)
Q Consensus 514 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------- 545 (701)
+++++.+.+ ..++||||+++|+|.++++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999988755 48999999999999999976532
Q ss_pred ----------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccCC
Q 041034 546 ----------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVDS 609 (701)
Q Consensus 546 ----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~ 609 (701)
...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 11288999999999999999999999 99999999999999999999999999998764332
Q ss_pred C--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 610 S--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 610 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
. ......||+.|+|||++.+..++.+. ||||+|+++++++
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~ell 289 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIF 289 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHT
T ss_pred cchhccccCCCceeEChhhhcCCCCCchh--hhhhHHHHHHHHH
Confidence 2 22345688999999998887777665 9999999999744
No 99
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=304.16 Aligned_cols=200 Identities=25% Similarity=0.459 Sum_probs=152.8
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46899999999999999999965 57999999999754322222346789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++..... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.....
T Consensus 90 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999986432 589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
.........||+.|+|||.+.+..++.+. ||||+|+++++++.+.+
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~ 210 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLES--DVWSLGCMFYTLLIGRP 210 (278)
T ss_dssp ---------------------------CT--HHHHHHHHHHHHHHSSC
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchh--hHHHHHHHHHHHHhCCC
Confidence 43334445799999999999887777766 99999999999877653
No 100
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-35 Score=314.27 Aligned_cols=201 Identities=26% Similarity=0.418 Sum_probs=169.2
Q ss_pred HHHhhhcCCccceEEeeccceEEEEEEcC------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeee
Q 041034 444 DLINATEDFHIRYCIGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517 (701)
Q Consensus 444 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 517 (701)
.+....++|++.+.||+|+||.||+|... +++.||||+++.... ....+.+.+|+.++++++||||++++++
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 118 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDNPNIVKLLGV 118 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 34456789999999999999999999663 348899999986542 3446789999999999999999999999
Q ss_pred eeeCcEEEEEEEccCCCCHHHHHhcCCC---------------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 041034 518 CLHKRCMFFIYEYMERGSLFYVLRDDDE---------------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSI 576 (701)
Q Consensus 518 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~gi 576 (701)
+.+.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ ||
T Consensus 119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i 195 (343)
T 1luf_A 119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195 (343)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 9999999999999999999999976421 13689999999999999999999999 99
Q ss_pred EecCCCCCcEEEcCCCCeEEEeecCccccccCC--CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 577 VHRDISSNNILLNSNLEAFVADFGTARLLHVDS--SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 577 vH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
+||||||+||+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.+. ||||+|+++|+++
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~el~ 270 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES--DVWAYGVVLWEIF 270 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCccc--ccHHHHHHHHHHH
Confidence 999999999999999999999999998764322 222345688999999998877777665 9999999999633
No 101
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.5e-35 Score=305.17 Aligned_cols=198 Identities=28% Similarity=0.425 Sum_probs=165.9
Q ss_pred cCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYE 529 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 529 (701)
++|++.+.||+|+||.||+|...+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 579999999999999999998778999999999765432 2223667899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccCC
Q 041034 530 YMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVDS 609 (701)
Q Consensus 530 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~ 609 (701)
|+++ +|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9986 99999876432 588999999999999999999999 99999999999999999999999999998765444
Q ss_pred CCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccCCCC
Q 041034 610 SNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
.......||+.|+|||++.+.. ++.+. ||||+|+++++++.+.|.
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~~l~~g~~p 200 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTI--DIWSVGCIFAEMVNGTPL 200 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred cccccccccccccCchheeCCCCCCcHH--HHHHHHHHHHHHHhCCCC
Confidence 4444557899999999986543 55554 999999999999988743
No 102
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.8e-35 Score=310.21 Aligned_cols=200 Identities=26% Similarity=0.390 Sum_probs=161.6
Q ss_pred hhcCCccceEEeeccceEEEEEEc----CCCcEEEEEEecCCCcc-ChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL----PDGKVVALKKLHQSETE-DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR 522 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (701)
..++|++.+.||+|+||.||+|+. .+++.||+|+++..... .......+.+|+.+++.++||||+++++++.+.+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 357899999999999999999965 47899999999865422 1223456788999999999999999999999999
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
..|+||||+++++|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 9999999999999999997644 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 603 RLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
+.............||+.|+|||++.+..++.+. ||||+|+++|+|+.+.+
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~el~~g~~ 219 (327)
T 3a62_A 169 KESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAV--DWWSLGALMYDMLTGAP 219 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHH--HHHHHHHHHHHHHHSSC
T ss_pred cccccCCccccccCCCcCccCHhhCcCCCCCCcc--cchhHHHHHHHHHHCCC
Confidence 8654443334455799999999999887777665 99999999998777653
No 103
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.2e-36 Score=320.74 Aligned_cols=196 Identities=24% Similarity=0.406 Sum_probs=165.8
Q ss_pred HhhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
....++|++.+.||+|+||.||+|... +++.||||+++... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 187 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence 344678999999999999999999765 78999999997643 233456788999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+.
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 99999999999999997643 2589999999999999999999999 999999999999999999999999999986
Q ss_pred cccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHc
Q 041034 605 LHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALAC 650 (701)
Q Consensus 605 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~c 650 (701)
...... ......+++.|+|||.+....++.+. ||||+|++++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--DvwslG~il~el 308 (377)
T 3cbl_A 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSES--DVWSFGILLWET 308 (377)
T ss_dssp CTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHH--HHHHHHHHHHHH
T ss_pred cCCCceeecCCCCCCCcCcCCHhHhccCCCCchh--hHHHHHHHHHHH
Confidence 532211 11122357789999998877776665 999999999963
No 104
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.1e-36 Score=312.33 Aligned_cols=198 Identities=27% Similarity=0.406 Sum_probs=162.5
Q ss_pred hhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc----
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR---- 522 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 522 (701)
...++|++.+.||+|+||.||+|+.. ++.||||++.... .......+|+.++++++||||+++++++.+..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV 95 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence 34678999999999999999999775 7899999996543 22345667999999999999999999998743
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcC-------CCCCeEecCCCCCcEEEcCCCCeE
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD-------CTPSIVHRDISSNNILLNSNLEAF 595 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------~~~givH~Dlkp~NIll~~~~~~k 595 (701)
.+++||||+++|+|.++++.. .+++..+..++.|++.||+|||+. +.++|+||||||+||+++.++.+|
T Consensus 96 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 96 DLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred eEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 479999999999999999764 489999999999999999999965 133899999999999999999999
Q ss_pred EEeecCccccccCCCC--ceeecccccccCCCCCCCCcC---ChhhHHHHHHHHHHHHHcccC
Q 041034 596 VADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPV---NQKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 596 L~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~---~~~~~~Di~slg~i~~~cl~~ 653 (701)
|+|||+|+........ .....||+.|+|||++.+... ......||||+|+++|+++++
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg 234 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhC
Confidence 9999999876543322 223579999999999876422 122345999999999875554
No 105
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.6e-34 Score=302.21 Aligned_cols=284 Identities=21% Similarity=0.277 Sum_probs=200.0
Q ss_pred CCcceeEeCCC----------CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcC
Q 041034 26 CNWVGITCDYK----------GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRW 95 (701)
Q Consensus 26 c~w~gv~c~~~----------~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 95 (701)
|.|..+.|... .+++.|++++|.+++ +++..|..+++|++|+|++|.+++..|..|+.+++|++|+|++
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 68999999632 378999999999985 4455689999999999999999999999999999999999999
Q ss_pred CcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCC--CCCcccccCCCCCcEEEceecccCCC
Q 041034 96 NNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLS--GVLPQEIGNLKSLIWLSVMYNTVGGP 173 (701)
Q Consensus 96 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~ 173 (701)
|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.++ +..+..+..+ +|++|++++|.+++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 9999 5555554 89999999999999888888999999999999999996 3667777777 77777777777765
Q ss_pred cCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCC
Q 041034 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNF 253 (701)
Q Consensus 174 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 253 (701)
+|..+. ++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|+|++|+++. +|..+..+
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~l 263 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSR-VPAGLPDL 263 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCB-CCTTGGGC
T ss_pred cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCee-cChhhhcC
Confidence 333332 566666666666666666666666666666666666666555566666666666666666663 45555566
Q ss_pred CcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCC--CCCCCcccCCCCCCee
Q 041034 254 SALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLS--GSFPTGIGNCTELQHL 331 (701)
Q Consensus 254 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L 331 (701)
++|+.|+|++|+|++..+..|..+.- ......|+.|++++|.+. +..|..|..+++|+.|
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l 325 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAI 325 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTE
T ss_pred ccCCEEECCCCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccccccchhhhh
Confidence 66666666666666554444443210 000234555555555554 3444555555566666
Q ss_pred eccCC
Q 041034 332 ALNHN 336 (701)
Q Consensus 332 ~L~~N 336 (701)
++++|
T Consensus 326 ~l~~n 330 (332)
T 2ft3_A 326 QFGNY 330 (332)
T ss_dssp EC---
T ss_pred hcccc
Confidence 65555
No 106
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.1e-35 Score=307.40 Aligned_cols=193 Identities=25% Similarity=0.444 Sum_probs=160.3
Q ss_pred hcCCccceEEeeccceEEEEEEc-----CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC--
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-----PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK-- 521 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-- 521 (701)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 57899999999999999999973 368899999997543 34457889999999999999999999998653
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
...++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 458999999999999999977542 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCC---CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 602 ARLLHVDSS---NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 602 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
++....... ......++..|+|||.+.+..++.+. ||||+|+++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~~l~~l~ 211 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELF 211 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHH--HHHHHHHHHHHHH
Confidence 987654322 12233577789999998887777665 9999999988643
No 107
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.7e-35 Score=311.31 Aligned_cols=201 Identities=23% Similarity=0.343 Sum_probs=174.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|+.. +++.||+|++++.........+.+.+|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999665 5889999999764322222346778999999988 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|+..
T Consensus 98 lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 9999999999999997644 589999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
..........+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.|.
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~G~~P 220 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSV--DWWAFGVLLYEMLAGQAP 220 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHH--HHHHHHHHHHHHHHSSCS
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcc--cccchHHHHHHHHcCCCC
Confidence 4444445566899999999999888887665 999999999999988754
No 108
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.6e-36 Score=326.91 Aligned_cols=199 Identities=23% Similarity=0.320 Sum_probs=162.4
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++.............+.+|+.+++.++||||+++++++.+.+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 356899999999999999999965 5799999999976433333334667889999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH-DCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+ + ||+||||||+|||++.++.+||+|||+|+..
T Consensus 226 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999999997654 58999999999999999999998 7 9999999999999999999999999999875
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
...........||+.|+|||++.+..++.+. ||||+|+++++|+.+.
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~ 346 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAV--DWWGLGVVMYEMMCGR 346 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHH--HHHHHHHHHHHHHHSS
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCcc--chhhhHHHHHHHhhCC
Confidence 5444445567899999999999888887765 9999999999876655
No 109
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.2e-35 Score=310.80 Aligned_cols=198 Identities=22% Similarity=0.363 Sum_probs=175.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999664 5889999999876555556678899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 99999999999987643 589999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
.........||+.|+|||++.+..++.+. ||||+|+++++++.+.
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~ 238 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEV--DVWSIGCIMYTLLVGK 238 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHH--HHHHHHHHHHHHHHSS
T ss_pred CcccccccCCCccccCHHHhccCCCCchh--hHHHHHHHHHHHHHCc
Confidence 44445556799999999998877776655 9999999999866654
No 110
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-35 Score=323.26 Aligned_cols=210 Identities=24% Similarity=0.408 Sum_probs=181.5
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|.+.+.||+|+||.||+|... +|+.||||++...........+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 468999999999999999999664 7999999999764332222356789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999997644 589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------------
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------------- 649 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------------- 649 (701)
. ......+||+.|+|||.+.+..+... ..||||+|+++|+
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~-~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~L 246 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGP-EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISL 246 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSH-HHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHH
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCC-cceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHH
Confidence 3 33344579999999999987765322 2499999999985
Q ss_pred ---cccCCCCCCCCHHHHHH
Q 041034 650 ---CLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 650 ---cl~~~P~~Rpt~~~i~~ 666 (701)
||..+|.+|||++|+++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCchhCcCHHHHHh
Confidence 78888888999888886
No 111
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.8e-35 Score=303.21 Aligned_cols=198 Identities=31% Similarity=0.501 Sum_probs=168.2
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
+.++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 457899999999999999999955 4678999999876443333335678999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 999999999999997654 589999999999999999999998 99999999999999999999999999986543
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
.. ......||+.|+|||.+.+..++.+. ||||+|+++++++.+.+
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~ 205 (279)
T 3fdn_A 161 SS--RRTDLCGTLDYLPPEMIEGRMHDEKV--DLWSLGVLCYEFLVGKP 205 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTH--HHHHHHHHHHHHHHSSC
T ss_pred cc--cccccCCCCCccCHhHhccCCCCccc--hhHhHHHHHHHHHHCCC
Confidence 22 23445799999999999887777665 99999999998777653
No 112
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6e-35 Score=303.89 Aligned_cols=220 Identities=25% Similarity=0.370 Sum_probs=177.9
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||+|++......+....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999654 689999999987766666667889999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 112 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999998654 589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCC-CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------------------
Q 041034 607 VDS-SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------------ 649 (701)
Q Consensus 607 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------------ 649 (701)
... .......|++.|+|||.+.+..++.+. ||||+|+++++
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRA--DIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPV 263 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCC--HHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCT
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchH--hHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCH
Confidence 332 122345699999999999888777776 99999999985
Q ss_pred --------cccCCCCCCC-CHHHHHHHhhcCCCcc
Q 041034 650 --------CLRSKPKSRP-TMQRISQELEGKTPMK 675 (701)
Q Consensus 650 --------cl~~~P~~Rp-t~~~i~~~l~~~~~~~ 675 (701)
||..+|.+|| +++++++.++......
T Consensus 264 ~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 264 AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 6777777777 7777777777655433
No 113
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.1e-35 Score=303.96 Aligned_cols=215 Identities=26% Similarity=0.450 Sum_probs=174.6
Q ss_pred hhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
...++|.+.+.||+|+||.||+|... ..+|+|+++.... .....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 108 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAI 108 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEE
Confidence 34578999999999999999999864 4689998876443 3444678999999999999999999999875 455789
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++++|.+++..... .+++.++..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+|+...
T Consensus 109 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEecCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 9999999999999975433 589999999999999999999999 99999999999999999999999999998654
Q ss_pred c--CCCCceeecccccccCCCCCC---CCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 607 V--DSSNRTLRAGTYGYIAPDQRL---SPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 607 ~--~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
. .........||+.|+|||++. +..++.+. ||||+|+++++
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS--DVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSK 261 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHH--HHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTT
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchh--hHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhh
Confidence 2 122233457999999999875 44455554 99999999985
Q ss_pred ---------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 ---------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 ---------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+||++.|+++.++...
T Consensus 262 ~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 77777888888888887776543
No 114
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.1e-36 Score=310.40 Aligned_cols=199 Identities=23% Similarity=0.409 Sum_probs=164.9
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc----
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR---- 522 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 522 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++......+......+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 357899999999999999999965 578999999998876666666788999999999999999999999987654
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
..|+||||+++++|.++++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 3599999999999999997654 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCC---CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 603 RLLHVDSS---NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 603 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
+....... ......||+.|+|||++.+..++.+. ||||+|+++|+|+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~~l~~ll~g~ 216 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS--DVYSLGCVLYEVLTGE 216 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHH--HHHHHHHHHHHHHHSS
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchH--hHHHHHHHHHHHHhCC
Confidence 87653322 22334689999999999888777765 9999999999755443
No 115
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.9e-35 Score=301.58 Aligned_cols=213 Identities=30% Similarity=0.518 Sum_probs=166.6
Q ss_pred hcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccC-hHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETED-SAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... ++.||||+++...... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 578999999999999999999874 8899999987654332 23357789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC--------CCCeEEEee
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS--------NLEAFVADF 599 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~--------~~~~kL~DF 599 (701)
|||+++++|.+++... .+++..+..++.|++.||+|||++...+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 9999999999998643 5899999999999999999999991112999999999999986 678999999
Q ss_pred cCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------------
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------ 649 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------ 649 (701)
|.++...... .....||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGS--DVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHH--HHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchh--hHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC
Confidence 9998764332 2245799999999998877777665 99999999985
Q ss_pred -------------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -------------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -------------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
|+..+|.+|||+.|+++.|++
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 677777777777777777654
No 116
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.2e-35 Score=322.14 Aligned_cols=219 Identities=24% Similarity=0.295 Sum_probs=179.9
Q ss_pred cHHHHHhhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeee
Q 041034 441 LYEDLINATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL 519 (701)
Q Consensus 441 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 519 (701)
.+.++....++|++.+.||+|+||+||+|+.. +++.||+|++.+.........+.+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 35566677899999999999999999999765 58899999997532211111234788999999999999999999999
Q ss_pred eCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEee
Q 041034 520 HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADF 599 (701)
Q Consensus 520 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DF 599 (701)
+.+..|+||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 99999999999999999999986432 589999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCCC-ceeecccccccCCCCCC-----CCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHH
Q 041034 600 GTARLLHVDSSN-RTLRAGTYGYIAPDQRL-----SPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQ 666 (701)
Q Consensus 600 Gla~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~ 666 (701)
|+|+........ ....+||+.|+|||++. ...++.+. ||||+|+++|+|+.+.|. ...+..++.+
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~--DvwSlGvil~elltG~~Pf~~~~~~~~~~ 291 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPEC--DWWSLGVCMYEMLYGETPFYAESLVETYG 291 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHH--HHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcC--eeHHHHHHHHHHHhCCCCCCCCChhHHHH
Confidence 999876543332 23357999999999986 44555554 999999999999998743 3334444433
No 117
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-35 Score=315.60 Aligned_cols=219 Identities=24% Similarity=0.392 Sum_probs=185.8
Q ss_pred hhhcCCccceEEeeccceEEEEEEc--------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeee
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGF 517 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 517 (701)
...++|.+.+.||+|+||.||+|.. ..++.||||+++.... ....+++.+|+++++++ +||||++++++
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEMMKMIGKHKNIINLLGA 143 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC--HHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence 3457899999999999999999964 2345799999976533 34457889999999999 89999999999
Q ss_pred eeeCcEEEEEEEccCCCCHHHHHhcCCC-------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCC
Q 041034 518 CLHKRCMFFIYEYMERGSLFYVLRDDDE-------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSN 584 (701)
Q Consensus 518 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~ 584 (701)
+.+.+..++||||+++|+|.+++..... ...+++..+..++.||+.||+|||++ +|+||||||+
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 220 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 220 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcc
Confidence 9999999999999999999999986532 13589999999999999999999999 9999999999
Q ss_pred cEEEcCCCCeEEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------
Q 041034 585 NILLNSNLEAFVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------- 649 (701)
Q Consensus 585 NIll~~~~~~kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------- 649 (701)
||+++.++.+||+|||+|+....... ......+|+.|+|||++.+..++.+. ||||+|+++++
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS--DVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHH--HHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchh--HHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999987653321 22334578899999999888777765 99999999985
Q ss_pred ------------------------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 ------------------------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 ------------------------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+|||++|+++.|++..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 299 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 66778899999999999887653
No 118
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.9e-35 Score=303.07 Aligned_cols=199 Identities=23% Similarity=0.374 Sum_probs=176.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467999999999999999999664 5889999999876555556678899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.++....
T Consensus 94 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 99999999999987644 589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
.........||+.|+|||.+.+..++.+. |+||+|+++++++.+.+
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~~l~~l~~g~~ 213 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEV--DVWSIGCIMYTLLVGKP 213 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHH--HHHHHHHHHHHHHHSSC
T ss_pred CccccccccCCCCcCCcchhccCCCCchh--hHHHHHHHHHHHHhCCC
Confidence 44445556799999999999877776655 99999999999887663
No 119
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-35 Score=305.21 Aligned_cols=196 Identities=26% Similarity=0.412 Sum_probs=165.8
Q ss_pred HhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
....++|++.+.||+|+||.||+|...+++.||+|+++..... .+++.+|++++++++||||+++++++.+.+..+
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 95 (283)
T 3gen_A 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 95 (283)
T ss_dssp BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeE
Confidence 3456789999999999999999998888889999999875543 266889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 96 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 170 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170 (283)
T ss_dssp EEECCCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred EEEeccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccc
Confidence 99999999999999976332 589999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCC-CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 606 HVDS-SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 606 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
.... .......+|+.|+|||.+.+..++.+. ||||+|++++++++
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Dv~slG~~l~~l~t 216 (283)
T 3gen_A 171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS--DIWAFGVLMWEIYS 216 (283)
T ss_dssp CCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHH--HHHHHHHHHHHHHT
T ss_pred cccccccccCCccCcccCCHHHhccCCCCchh--hHHHHHHHHHHHHh
Confidence 4221 112223467889999998877777665 99999999997543
No 120
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.2e-34 Score=298.35 Aligned_cols=191 Identities=29% Similarity=0.473 Sum_probs=159.5
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHH----HHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFV----ESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
.++|++.+.||+|+||.||+|.. .+++.||+|++........... +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 57899999999999999999965 5789999999976544332211 67899999999999999999999987766
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCcEEEcCCCC-----eEE
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS--IVHRDISSNNILLNSNLE-----AFV 596 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g--ivH~Dlkp~NIll~~~~~-----~kL 596 (701)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcccC--CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 699999999999998876543 589999999999999999999998 8 999999999999988776 999
Q ss_pred EeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 597 ADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 597 ~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
+|||+++... .......||+.|+|||++...........||||+|+++++
T Consensus 171 ~Dfg~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~ 220 (287)
T 4f0f_A 171 ADFGLSQQSV---HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT 220 (287)
T ss_dssp CCCTTCBCCS---SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHH
T ss_pred CCCCcccccc---ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHH
Confidence 9999997543 2344467999999999985433333334599999999985
No 121
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.8e-35 Score=305.16 Aligned_cols=192 Identities=29% Similarity=0.432 Sum_probs=157.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhc--CCCCceeeeeeeeee----C
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST--VRHRNIVKLYGFCLH----K 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~ 521 (701)
..++|++.+.||+|+||.||+|.. +++.||||++.... .+.+.+|.+++.. ++||||+++++++.. .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 357899999999999999999987 68999999986532 2445556666655 799999999998654 3
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeEecCCCCCcEEEcCCCC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH--------HDCTPSIVHRDISSNNILLNSNLE 593 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~givH~Dlkp~NIll~~~~~ 593 (701)
...++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 5689999999999999999653 5899999999999999999999 77 9999999999999999999
Q ss_pred eEEEeecCccccccCCCC----ceeecccccccCCCCCCCCcCC----hhhHHHHHHHHHHHHHcccC
Q 041034 594 AFVADFGTARLLHVDSSN----RTLRAGTYGYIAPDQRLSPPVN----QKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 594 ~kL~DFGla~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~----~~~~~Di~slg~i~~~cl~~ 653 (701)
+||+|||+|+........ .....||+.|+|||++.+.... .....||||+|+++|+++++
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 999999999876543222 2234799999999998776332 22345999999999887664
No 122
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-35 Score=311.57 Aligned_cols=190 Identities=23% Similarity=0.352 Sum_probs=165.9
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.+++.++||||+++++++.+....++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch---hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999965 4689999999976532 2246788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC--CCCeEEEeecCcccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS--NLEAFVADFGTARLL 605 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~--~~~~kL~DFGla~~~ 605 (701)
|||+++|+|.+++.... ..+++..+..++.||+.||+|||++ ||+||||||+||+++. ++.+||+|||+|+..
T Consensus 127 ~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999987643 2589999999999999999999999 9999999999999974 478999999999877
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
... .......||+.|+|||++.+..++.+. ||||+|+++|+
T Consensus 202 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwSlG~il~e 242 (387)
T 1kob_A 202 NPD-EIVKVTTATAEFAAPEIVDREPVGFYT--DMWAIGVLGYV 242 (387)
T ss_dssp CTT-SCEEEECSSGGGCCHHHHTTCCBCHHH--HHHHHHHHHHH
T ss_pred CCC-cceeeeccCCCccCchhccCCCCCCcc--cEeeHhHHHHH
Confidence 543 233455799999999999888877765 99999999996
No 123
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.5e-34 Score=300.22 Aligned_cols=280 Identities=20% Similarity=0.291 Sum_probs=212.5
Q ss_pred CCCcceeEeCC----------CCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECc
Q 041034 25 HCNWVGITCDY----------KGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLR 94 (701)
Q Consensus 25 ~c~w~gv~c~~----------~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 94 (701)
.|.|+.+.|.. ...++.|++++|.+++ ++...|+.+++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 46899999863 2468899999999986 445568999999999999999999889999999999999999
Q ss_pred CCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCC--CCcccccCCCCCcEEEceecccCC
Q 041034 95 WNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSG--VLPQEIGNLKSLIWLSVMYNTVGG 172 (701)
Q Consensus 95 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~ 172 (701)
+|.++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|.+.. ..+..|.++++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99999 5565554 799999999999999888899999999999999999964 778899999999999999999975
Q ss_pred CcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCC
Q 041034 173 PIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGN 252 (701)
Q Consensus 173 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 252 (701)
+|..+. ++|++|++++|++++..|..+..+++|++|++++|.+++..+..+..+++|++|+|++|+++. +|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCcc-CChhhcc
Confidence 444333 677788888887777767777777777777777777776666667777777777777777774 5666667
Q ss_pred CCcccEEEcCCCCCccccCcccCCC------CCCcEEEccCccCCC--CCcccccCccceeeecCCCC
Q 041034 253 FSALAELDLSDNKIRGIIPDELSKL------SNLQYLNLSSNLLSG--QIPFAIGKLFNLVSLDLSKN 312 (701)
Q Consensus 253 ~~~L~~L~L~~N~l~~~~p~~l~~l------~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N 312 (701)
+++|+.|+|++|+|++..+..|+.. +.|+.|++++|.+.. ..|..|..+.+|+.++|++|
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 7777777777777776655555432 445555555555432 23334444444444444444
No 124
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1e-35 Score=320.12 Aligned_cols=206 Identities=24% Similarity=0.320 Sum_probs=173.6
Q ss_pred HHHHHhhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 442 YEDLINATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 442 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
+.++....++|++.+.||+|+||.||+|+.. +++.||+|++++.........+.+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455667789999999999999999999664 689999999875321111112447889999999999999999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
.+..|+||||+++|+|.++++.. .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccc
Confidence 99999999999999999999764 489999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCC-CceeecccccccCCCCCCCCc----CChhhHHHHHHHHHHHHHcccCCCC
Q 041034 601 TARLLHVDSS-NRTLRAGTYGYIAPDQRLSPP----VNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 601 la~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
+|+....... .....+||+.|+|||++.+.. ++.+ .||||+|+++|+|+.+.|.
T Consensus 214 ~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~--~DiwSlGvilyell~G~~P 272 (410)
T 3v8s_A 214 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE--CDWWSVGVFLYEMLVGDTP 272 (410)
T ss_dssp TCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETH--HHHHHHHHHHHHHHHSSCT
T ss_pred eeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCc--ceEecchHHHHHHHhCCCC
Confidence 9987653322 223457999999999987655 4444 4999999999999988754
No 125
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-35 Score=304.59 Aligned_cols=200 Identities=24% Similarity=0.347 Sum_probs=168.9
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc--EEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR--CMF 525 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 525 (701)
.++|++.+.||+|+||.||+|... +++.||||++........ .+.+.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC--HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence 467999999999999999999664 589999999976443322 467789999999999999999999988755 789
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE----cCCCCeEEEeecC
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL----NSNLEAFVADFGT 601 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll----~~~~~~kL~DFGl 601 (701)
+||||+++++|.+++........+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 9999999999999998765444599999999999999999999999 99999999999999 7788899999999
Q ss_pred ccccccCCCCceeecccccccCCCCCC--------CCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRL--------SPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
|+...... ......||+.|+|||++. +..++.+. ||||+|+++++|+.+.+.
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~--DiwslG~il~el~~g~~p 222 (319)
T 4euu_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV--DLWSIGVTFYHAATGSLP 222 (319)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTH--HHHHHHHHHHHHHHSSCS
T ss_pred ceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHH--HHHHHHHHHHHHHhCCCC
Confidence 98775433 233457999999999875 34555554 999999999987776543
No 126
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.5e-35 Score=301.44 Aligned_cols=209 Identities=22% Similarity=0.350 Sum_probs=152.1
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46899999999999999999965 46899999999876555445567889999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+ ++++.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 92 ~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 668888887654 589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC-CCCCCHHHHHH
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP-KSRPTMQRISQ 666 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P-~~Rpt~~~i~~ 666 (701)
.. ......||+.|+|||.+.+..+... ..||||+|+++++++.+.+ ....+..++.+
T Consensus 165 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~-~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 222 (275)
T 2eue_A 165 GN-FLKTSCGSPNYAAPEVISGKLYAGP-EVDVWSCGVILYVMLCRRLPFDDESIPVLFK 222 (275)
T ss_dssp -----------CTTCCHHHHCC-----T-HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred cc-cccCCCCCcCcCCceeeeCCCCCCc-ccchHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 32 2334569999999999877665322 2499999999999887653 33333333333
No 127
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.1e-35 Score=309.44 Aligned_cols=224 Identities=25% Similarity=0.417 Sum_probs=167.1
Q ss_pred HHHHHhhhcCCccceEEeeccceEEEEEEcCC-Cc---EEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeee
Q 041034 442 YEDLINATEDFHIRYCIGTGGYGSVYKAELPD-GK---VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF 517 (701)
Q Consensus 442 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 517 (701)
++++....++|++.+.||+|+||.||+|.... ++ .||||+++...... ...+.+.+|+.++++++||||++++++
T Consensus 15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~ 93 (323)
T 3qup_A 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGV 93 (323)
T ss_dssp -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEE
T ss_pred hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhce
Confidence 34445567899999999999999999997653 32 79999997654333 335788999999999999999999999
Q ss_pred eeeCcEE------EEEEEccCCCCHHHHHhcCC---CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE
Q 041034 518 CLHKRCM------FFIYEYMERGSLFYVLRDDD---EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL 588 (701)
Q Consensus 518 ~~~~~~~------~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll 588 (701)
+...... ++||||+++|+|.+++.... ....+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli 170 (323)
T 3qup_A 94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCML 170 (323)
T ss_dssp EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEE
Confidence 9877655 99999999999999986432 122589999999999999999999999 99999999999999
Q ss_pred cCCCCeEEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-----------------
Q 041034 589 NSNLEAFVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA----------------- 649 (701)
Q Consensus 589 ~~~~~~kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~----------------- 649 (701)
+.++.+||+|||+|+....... ......+++.|+|||.+.+..++.+. ||||+|+++++
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~ell~~g~~p~~~~~~~~~ 248 (323)
T 3qup_A 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHS--DVWAFGVTMWEIMTRGQTPYAGIENAEI 248 (323)
T ss_dssp CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCcc--chhhHHHHHHHHHhCCCCCccccChHHH
Confidence 9999999999999987643322 12234577889999998887777665 99999999985
Q ss_pred --------------------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 --------------------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 --------------------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
||..+|.+|||+.++++.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 249 YNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 6667777777777777777653
No 128
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1e-34 Score=302.31 Aligned_cols=219 Identities=22% Similarity=0.345 Sum_probs=173.9
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|.. .+++.||+|++......+....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 46799999999999999999965 57999999999876555566678899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCC-CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 528 YEYMERGSLFYVLRDDD-EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
|||+++++|.+++.... ....+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999986521 123589999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------------------------------
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------------- 649 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------------- 649 (701)
..........|++.|+|||.+.+..++.+. ||||+|+++++
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKS--DIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchh--hHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCH
Confidence 444444455799999999999887777665 99999999985
Q ss_pred --------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 --------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 --------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+||++.++++.+++..
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 66677777777777777766543
No 129
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.7e-35 Score=307.32 Aligned_cols=225 Identities=24% Similarity=0.399 Sum_probs=183.2
Q ss_pred hcCCccceEEeeccceEEEEEEc-----CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeee--eC
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-----PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL--HK 521 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~ 521 (701)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++. +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 46899999999999999999973 468899999997653 334577899999999999999999999886 45
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
...++||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 678999999999999999976432 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCC---CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-----------------------------
Q 041034 602 ARLLHVDSS---NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA----------------------------- 649 (701)
Q Consensus 602 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~----------------------------- 649 (701)
++....... ......+|+.|+|||++.+..++.+. ||||+|+++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 251 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQS--DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHH--HHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHH--hHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHH
Confidence 987653322 12234578889999998877776665 99999999884
Q ss_pred ----------------------------cccCCCCCCCCHHHHHHHhhcCCCccchhhhhhH
Q 041034 650 ----------------------------CLRSKPKSRPTMQRISQELEGKTPMKKGLKEISI 683 (701)
Q Consensus 650 ----------------------------cl~~~P~~Rpt~~~i~~~l~~~~~~~~~~~~~~~ 683 (701)
||..+|.+|||+.++++.|+..............
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 313 (327)
T 3lxl_A 252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 313 (327)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------------
T ss_pred HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcccccc
Confidence 6777899999999999999987765554444333
No 130
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3e-35 Score=306.85 Aligned_cols=198 Identities=23% Similarity=0.369 Sum_probs=167.7
Q ss_pred hhhcCCccceEEeeccceEEEEEEc------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
...++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++++++||||+++++++.+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 3467899999999999999999964 245789999997653 23445788999999999999999999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCC---------------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEec
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDE---------------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHR 579 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~ 579 (701)
.+..++||||+++++|.+++..... ...+++..+..++.||+.||+|||++ ||+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccc
Confidence 9999999999999999999986532 12488999999999999999999999 99999
Q ss_pred CCCCCcEEEcCCCCeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 580 DISSNNILLNSNLEAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 580 Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
||||+||+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.+. ||||+|+++++++
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~el~ 246 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS--DVWSFGVLLWEIV 246 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHH--HHHHHHHHHHHHH
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchh--hHHHHHHHHHHHH
Confidence 99999999999999999999999876433221 2234578889999998877777665 9999999999644
No 131
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=318.40 Aligned_cols=210 Identities=23% Similarity=0.315 Sum_probs=176.6
Q ss_pred cHHHHHhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeee
Q 041034 441 LYEDLINATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL 519 (701)
Q Consensus 441 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 519 (701)
.+++.....++|++.+.||+|+||.||+|+. .+++.||+|++.+.........+.+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 4556666789999999999999999999966 479999999997533222222345788999999999999999999999
Q ss_pred eCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEee
Q 041034 520 HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADF 599 (701)
Q Consensus 520 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DF 599 (701)
+.+..|+||||+++|+|.+++.+... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999976432 589999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCCC-ceeecccccccCCCCCC-------CCcCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 600 GTARLLHVDSSN-RTLRAGTYGYIAPDQRL-------SPPVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 600 Gla~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
|+|+........ ....+||+.|+|||++. ...++.+. |+||+|+++|+|+.+.+..
T Consensus 207 Gla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~--DiwSlGvilyelltG~~Pf 270 (412)
T 2vd5_A 207 GSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPEC--DWWALGVFAYEMFYGQTPF 270 (412)
T ss_dssp TTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHH--HHHHHHHHHHHHHHSSCTT
T ss_pred hhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHH--hhhHHhHHHHHHHhCCCCC
Confidence 999876543332 22357999999999886 33455554 9999999999999987543
No 132
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.7e-35 Score=311.21 Aligned_cols=190 Identities=25% Similarity=0.360 Sum_probs=157.3
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|+.. +++.||||++....... +.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 3578999999999999999999664 78999999998654433 567899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC--eEEEeecCccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE--AFVADFGTARL 604 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~--~kL~DFGla~~ 604 (701)
||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+|+.
T Consensus 94 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 999999999999997644 589999999999999999999999 9999999999999987765 99999999975
Q ss_pred cccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
.... .......||+.|+|||++.+..+.... +||||+|+++|+
T Consensus 168 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~-~DiwslG~il~e 210 (361)
T 3uc3_A 168 SVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKI-ADVWSCGVTLYV 210 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHH-HHHHHHHHHHHH
T ss_pred cccc-CCCCCCcCCCCcCChhhhcCCCCCCCe-eeeehhHHHHHH
Confidence 4322 223345799999999998887776553 499999999985
No 133
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.2e-35 Score=308.05 Aligned_cols=209 Identities=16% Similarity=0.228 Sum_probs=179.6
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++...... +.+.+|+.+++++ +||||+++++++...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 46899999999999999999964 57899999998765432 4578899999999 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC-----eEEEeecC
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE-----AFVADFGT 601 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~-----~kL~DFGl 601 (701)
||||+ +++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 8999999986432 589999999999999999999999 9999999999999998877 99999999
Q ss_pred ccccccCCCC-------ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------------------
Q 041034 602 ARLLHVDSSN-------RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------- 649 (701)
Q Consensus 602 a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------- 649 (701)
|+.+...... .....||+.|+|||++.+..++.+. ||||+|+++++
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~ 234 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRD--DLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 234 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchh--HHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh
Confidence 9876543221 2345799999999999988887765 99999999996
Q ss_pred -----------------------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -----------------------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -----------------------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
|+..+|.+||+++++.+.++.
T Consensus 235 ~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~ 278 (330)
T 2izr_A 235 TKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTD 278 (330)
T ss_dssp HHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred hhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHH
Confidence 555688889998888887753
No 134
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2e-34 Score=297.49 Aligned_cols=197 Identities=23% Similarity=0.373 Sum_probs=169.0
Q ss_pred cCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (701)
++|++.+.||+|+||+||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc-CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 5799999999999999999965 46899999999865533 333567889999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccC
Q 041034 529 EYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVD 608 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~ 608 (701)
||+++ ++.+.+..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+|+.....
T Consensus 81 e~~~~-~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99986 66666554332 589999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccC-CC
Q 041034 609 SSNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRS-KP 655 (701)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~-~P 655 (701)
........||+.|+|||++.+.. ++.+. ||||+|+++++++.+ .|
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~~l~~~~~p 201 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSI--DMWSAGCIFAELANAGRP 201 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHH--HHHHHHHHHHHHTTTSCC
T ss_pred cccccCCccccCCcChHHHcCCCCcCchH--HHHHHHHHHHHHHHcCCC
Confidence 55555667999999999987765 45554 999999999999854 44
No 135
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.3e-35 Score=302.77 Aligned_cols=197 Identities=26% Similarity=0.374 Sum_probs=162.9
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 368999999999999999999664 589999999876543 344467788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.++....
T Consensus 81 ~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999999887554 589999999999999999999999 999999999999999999999999999988764
Q ss_pred CCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
.........||+.|+|||.+.+ ..++.+. ||||+|+++++++++.
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~--Di~slG~il~~l~~g~ 200 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPV--DVWAIGCVFAELLSGV 200 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHH--HHHHHHHHHHHHHHSS
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcch--hhHHHHHHHHHHHhCC
Confidence 4444455679999999998865 4445554 9999999999877654
No 136
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.1e-35 Score=304.04 Aligned_cols=195 Identities=23% Similarity=0.386 Sum_probs=162.4
Q ss_pred hcCCccceEEeeccceEEEEEEc-----CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC--
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-----PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK-- 521 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-- 521 (701)
.++|++.+.||+|+||.||+|.+ .+++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN--HIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C--CHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccch--hHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 45689999999999999999973 468899999998654322 247789999999999999999999999876
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
...++||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 668999999999999999965432 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCC---CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 602 ARLLHVDSS---NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 602 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
++....... ......+|..|+|||.+.+..++.+. ||||+|++++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~ 224 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIAS--DVWSFGVTLHELLT 224 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHH--HHHHHHHHHHHHHT
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcch--hHHHHHHHHHHHHH
Confidence 987754432 12334578889999998877777654 99999999886443
No 137
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=316.74 Aligned_cols=217 Identities=24% Similarity=0.373 Sum_probs=181.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (701)
.++|++.+.||+|+||.||+|... +++.||||+++.... ......+.+|+.++++++||||+++++++.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 568999999999999999999742 467899999975433 333467889999999999999999999999999
Q ss_pred EEEEEEEccCCCCHHHHHhcCC----CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC---CeE
Q 041034 523 CMFFIYEYMERGSLFYVLRDDD----EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL---EAF 595 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~---~~k 595 (701)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||++ ||+||||||+|||++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999997643 123589999999999999999999999 999999999999999555 599
Q ss_pred EEeecCccccccCC--CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------
Q 041034 596 VADFGTARLLHVDS--SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------ 649 (701)
Q Consensus 596 L~DFGla~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------ 649 (701)
|+|||+|+...... .......+|+.|+|||++.+..++.+. ||||+|+++++
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~ 302 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 302 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHH--HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 99999998653222 223345689999999998887777765 99999999985
Q ss_pred -------------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 -------------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 -------------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+||++.++++.++...
T Consensus 303 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 303 GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 67778888888888888876543
No 138
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=310.07 Aligned_cols=211 Identities=23% Similarity=0.377 Sum_probs=179.9
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccCh-----HHHHHHHHHHHHHhcCCCCceeeeeeeeeeC
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDS-----AFVESFQNEARVLSTVRHRNIVKLYGFCLHK 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++........ ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999964 5789999999987643211 1234567899999999999999999999999
Q ss_pred cEEEEEEEccCCC-CHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 522 RCMFFIYEYMERG-SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 522 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999998654 589999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCCCceeecccccccCCCCCCCCcC-ChhhHHHHHHHHHHHHH------------------------------
Q 041034 601 TARLLHVDSSNRTLRAGTYGYIAPDQRLSPPV-NQKIIQDIILVSTTALA------------------------------ 649 (701)
Q Consensus 601 la~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~Di~slg~i~~~------------------------------ 649 (701)
+++...... ......||+.|+|||++.+..+ +.+ .||||+|+++|+
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~--~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~ 252 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPE--LEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELM 252 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHH--HHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHH
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCc--ccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHHHH
Confidence 998765433 3344679999999999887766 444 499999999985
Q ss_pred -----cccCCCCCCCCHHHHHHH
Q 041034 650 -----CLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 650 -----cl~~~P~~Rpt~~~i~~~ 667 (701)
||..+|.+|||++++++.
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 253 SLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHHHHHccCChhhCcCHHHHhcC
Confidence 777788888888888774
No 139
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-34 Score=298.87 Aligned_cols=210 Identities=16% Similarity=0.245 Sum_probs=181.6
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++...... +.+.+|+.+++.+ +|++++++++++.+....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc-----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 56799999999999999999964 57999999998754432 4577899999999 79999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC-----eEEEeecC
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE-----AFVADFGT 601 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~-----~kL~DFGl 601 (701)
||||+ +++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||+
T Consensus 84 v~e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 8999999986542 589999999999999999999999 9999999999999987776 99999999
Q ss_pred ccccccCCC-------CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------------------
Q 041034 602 ARLLHVDSS-------NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------- 649 (701)
Q Consensus 602 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------- 649 (701)
|+....... ......||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRD--DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE 235 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHH--HHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHh
Confidence 987754322 12345699999999999888877665 99999999984
Q ss_pred ------------------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 ------------------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 ------------------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
||..+|.+||+++++.+.++..
T Consensus 236 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 236 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 8888999999999998888753
No 140
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=308.44 Aligned_cols=193 Identities=25% Similarity=0.360 Sum_probs=153.3
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||||+++.... .+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh-----HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 4678999999999999999999665 588999999976432 3567899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC---CCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---NLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---~~~~kL~DFGla~ 603 (701)
||||+++|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999997654 589999999999999999999999 9999999999999975 8899999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
..... .......||+.|+|||++.+..++.+. ||||+|+++|+++.+.
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~ 247 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEV--DMWSVGIITYILLCGF 247 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSS
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCccc--chHHHHHHHHHHHhCC
Confidence 76432 223345799999999999888777765 9999999999866654
No 141
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.5e-35 Score=306.87 Aligned_cols=188 Identities=23% Similarity=0.320 Sum_probs=146.6
Q ss_pred ceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeeeCcEEEEEEEccC
Q 041034 455 RYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLHKRCMFFIYEYME 532 (701)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 532 (701)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+|+.+++.+. ||||+++++++.+....|+||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM------EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG------HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh------hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 37899999999999965 468999999996532 356788999999997 9999999999999999999999999
Q ss_pred CCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC---CeEEEeecCccccccCC
Q 041034 533 RGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL---EAFVADFGTARLLHVDS 609 (701)
Q Consensus 533 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~---~~kL~DFGla~~~~~~~ 609 (701)
+|+|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||+++......
T Consensus 90 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 90 GGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp SCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999999998754 589999999999999999999999 999999999999997665 89999999998766554
Q ss_pred CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 610 SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
.......||+.|+|||.+.+..++.+. ||||+|+++++++.+.+.
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~--DiwslG~il~~ll~g~~p 208 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESC--DLWSLGVILYTMLSGQVP 208 (325)
T ss_dssp --------------------CCCCHHH--HHHHHHHHHHHHHHSSCT
T ss_pred CcccccCCCcCccCHHHhcCCCCCCcc--chHHHHHHHHHHHhCCCC
Confidence 445556789999999999888887765 999999999998877643
No 142
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2e-34 Score=296.16 Aligned_cols=197 Identities=21% Similarity=0.369 Sum_probs=169.9
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 357899999999999999999965 46899999999765433 3345778899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC---eEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE---AFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~---~kL~DFGla~ 603 (701)
||||+++++|.+.+.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999998887654 589999999999999999999999 9999999999999986655 9999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
..... .......||+.|+|||.+.+..++.+. ||||+|+++++++.+.
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~~l~~l~~g~ 204 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPV--DIWACGVILYILLVGY 204 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSS
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCccc--chHHHHHHHHHHHHCC
Confidence 76533 223345799999999999888777665 9999999999766654
No 143
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-35 Score=311.30 Aligned_cols=198 Identities=26% Similarity=0.382 Sum_probs=165.2
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEc------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeee
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGF 517 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 517 (701)
++...++|++.+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.+++++ +||||++++++
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 117 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGA 117 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 345578999999999999999999964 2466899999975432 22347789999999999 89999999999
Q ss_pred eeeCcEEEEEEEccCCCCHHHHHhcCCCc--------------------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 041034 518 CLHKRCMFFIYEYMERGSLFYVLRDDDEA--------------------IELNWTRRVNIVKSVAHALSYLHHDCTPSIV 577 (701)
Q Consensus 518 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~qi~~~L~~LH~~~~~giv 577 (701)
+...+..++||||+++|+|.+++...... ..+++..+..++.||+.||+|||++ ||+
T Consensus 118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 99999999999999999999999765321 2378999999999999999999999 999
Q ss_pred ecCCCCCcEEEcCCCCeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 578 HRDISSNNILLNSNLEAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 578 H~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
||||||+||+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~e 266 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS--DVWSYGILLWE 266 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHH
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhH--hHHHHHHHHHH
Confidence 9999999999999999999999999876543322 2234578899999998877777665 99999999996
No 144
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.2e-35 Score=304.88 Aligned_cols=201 Identities=24% Similarity=0.370 Sum_probs=156.6
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||+|+++...... ..+.+.+|+.++++++||||+++++++.+++..++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG--TPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTC--SCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc--cHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 3578999999999999999999664 68999999997654322 23667899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCC---CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDD---EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
||||++ |+|.+++.... ....+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 59999886532 123588999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
.............||+.|+|||++.+. .++.+. ||||+|+++++++.+.+.
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~el~~g~~p 208 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI--DIWSCGCILAEMITGKPL 208 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHH--HHHHHHHHHHHHHhCCCC
Confidence 775444444556799999999998764 455554 999999999999988753
No 145
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.1e-35 Score=300.39 Aligned_cols=213 Identities=26% Similarity=0.471 Sum_probs=182.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee------
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH------ 520 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 520 (701)
..++|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 3567999999999999999999665 79999999997643 346789999999999999999998864
Q ss_pred ----------CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC
Q 041034 521 ----------KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS 590 (701)
Q Consensus 521 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~ 590 (701)
....++||||+++++|.+++.... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 445899999999999999997643 22589999999999999999999999 9999999999999999
Q ss_pred CCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH---------------------
Q 041034 591 NLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA--------------------- 649 (701)
Q Consensus 591 ~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~--------------------- 649 (701)
++.+||+|||+++...... ......||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~ 234 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEV--DLYALGLILAELLHVCDTAFETSKFFTDLRDG 234 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHH--HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchh--hhHHHHHHHHHHHhcCCcchhHHHHHHHhhcc
Confidence 9999999999998765433 23345699999999998887776665 99999999984
Q ss_pred ----------------cccCCCCCCCCHHHHHHHhhcCCCc
Q 041034 650 ----------------CLRSKPKSRPTMQRISQELEGKTPM 674 (701)
Q Consensus 650 ----------------cl~~~P~~Rpt~~~i~~~l~~~~~~ 674 (701)
||..+|.+||++.|+++.+......
T Consensus 235 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 235 IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 7888999999999999998766543
No 146
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.9e-35 Score=324.19 Aligned_cols=217 Identities=25% Similarity=0.450 Sum_probs=183.0
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
++...++|++.+.||+|+||.||+|...+++.||||+++..... .+.+.+|+.++++++||||+++++++. .+..
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS----VEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCcc----HHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 45567889999999999999999998888899999999865432 478899999999999999999999986 5668
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred EEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence 99999999999999997542 22578899999999999999999999 999999999999999999999999999987
Q ss_pred cccCC-CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH----------------------------------
Q 041034 605 LHVDS-SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA---------------------------------- 649 (701)
Q Consensus 605 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~---------------------------------- 649 (701)
..... .......+++.|+|||.+....++.++ ||||+|+++++
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~ 411 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS--DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP 411 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSC
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHH--HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 64221 111223467889999999877777665 99999999985
Q ss_pred ---------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 ---------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 ---------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+|||+++|++.|+...
T Consensus 412 ~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 412 EELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 77777777888888877777654
No 147
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.7e-34 Score=302.26 Aligned_cols=195 Identities=23% Similarity=0.337 Sum_probs=168.1
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccCh---HHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
..++|++.+.||+|+||.||+|... +++.||+|++........ ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3567999999999999999999654 689999999986543221 124678999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC----CeEEEee
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL----EAFVADF 599 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~----~~kL~DF 599 (701)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999997643 588999999999999999999999 999999999999999887 7999999
Q ss_pred cCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
|+++...... ......||+.|+|||.+.+..++.+. ||||+|+++++++
T Consensus 164 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~ 212 (321)
T 2a2a_A 164 GLAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEA--DMWSIGVITYILL 212 (321)
T ss_dssp TTCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHHHH
T ss_pred ccceecCccc-cccccCCCCCccCcccccCCCCCCcc--ccHHHHHHHHHHH
Confidence 9998765432 23345799999999999887777665 9999999999633
No 148
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.4e-35 Score=301.77 Aligned_cols=211 Identities=23% Similarity=0.413 Sum_probs=180.9
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CC-------cEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DG-------KVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
.++|++.+.||+|+||.||+|... ++ +.||+|++..... ...+.+.+|+.++++++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR---NYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG---GGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH---HHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 578999999999999999999554 23 4799999865432 234778999999999999999999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC-------
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE------- 593 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~------- 593 (701)
++..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 9999999999999999999987542 489999999999999999999999 9999999999999998877
Q ss_pred -eEEEeecCccccccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHH----------------------
Q 041034 594 -AFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALA---------------------- 649 (701)
Q Consensus 594 -~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~---------------------- 649 (701)
+||+|||.+..... .....+|+.|+|||++.+ ..++.+. ||||+|+++++
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~--DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~ 232 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLAT--DKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE 232 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHH--HHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchh--HHHHHHHHHHHHHcCCCCCccccchHHHHHHhh
Confidence 99999999975432 233468999999999876 4455554 99999999985
Q ss_pred -------------------cccCCCCCCCCHHHHHHHhhcCCC
Q 041034 650 -------------------CLRSKPKSRPTMQRISQELEGKTP 673 (701)
Q Consensus 650 -------------------cl~~~P~~Rpt~~~i~~~l~~~~~ 673 (701)
||..+|.+|||+.++++.|++...
T Consensus 233 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 233 DRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp TTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred ccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 788899999999999999988764
No 149
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.8e-35 Score=307.34 Aligned_cols=193 Identities=26% Similarity=0.403 Sum_probs=164.8
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..+.|++.+.||+|+||.||+|.. .+++.||||++...........+.+.+|++++++++||||+++++++.+.+..++
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 345699999999999999999965 5799999999987655445556788999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||++ |++.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 132 v~e~~~-g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EEECCS-EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EEecCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 999997 588888764332 589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCCCceeecccccccCCCCCC---CCcCChhhHHHHHHHHHHHHHccc
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRL---SPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
.. ....||+.|+|||++. ...++.+. ||||+|+++++++.
T Consensus 206 ~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~--DiwslG~il~ell~ 248 (348)
T 1u5q_A 206 PA----NSFVGTPYWMAPEVILAMDEGQYDGKV--DVWSLGITCIELAE 248 (348)
T ss_dssp SB----CCCCSCGGGCCHHHHHTTSSCCBCTHH--HHHHHHHHHHHHHH
T ss_pred CC----CcccCCcceeCHhhhccccCCCCCcHH--HHHHHHHHHHHHHh
Confidence 32 2357999999999874 34555554 99999999996433
No 150
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.9e-35 Score=318.79 Aligned_cols=191 Identities=25% Similarity=0.412 Sum_probs=163.0
Q ss_pred HhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc-EE
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR-CM 524 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~ 524 (701)
+...++|++.+.||+|+||.||+|... ++.||||+++.... .+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 262 (450)
T 1k9a_A 189 ALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 262 (450)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTT-----SHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCE
T ss_pred ccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchH-----HHHHHHHHHHHHhccCCCEEEEEEEEEcCCCce
Confidence 345678999999999999999999874 78999999986542 367899999999999999999999987655 79
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 338 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 338 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence 999999999999999986542 2478999999999999999999999 999999999999999999999999999986
Q ss_pred cccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
.... .....+++.|+|||.+.+..++.++ ||||+|+++++++
T Consensus 339 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~s--DvwslG~~l~el~ 380 (450)
T 1k9a_A 339 ASST---QDTGKLPVKWTAPEALREKKFSTKS--DVWSFGILLWEIY 380 (450)
T ss_dssp CC---------CCCTTTSCHHHHHSSCCCHHH--HHHHHHHHHHHHH
T ss_pred cccc---ccCCCCCcceeCHHHhcCCCCCcHH--HHHHHHHHHHHHH
Confidence 4322 2223578899999999888777765 9999999999633
No 151
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-35 Score=304.73 Aligned_cols=220 Identities=27% Similarity=0.454 Sum_probs=186.7
Q ss_pred HHHHHhhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 442 YEDLINATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 442 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
++++....++|++.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 80 (288)
T 3kfa_A 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80 (288)
T ss_dssp CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST----HHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 3445566789999999999999999999665 588999999976432 24778899999999999999999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
.+..++||||+++++|.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg 156 (288)
T 3kfa_A 81 EPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFG 156 (288)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred CCCEEEEEEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCc
Confidence 9999999999999999999986443 2589999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCCC-ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------------
Q 041034 601 TARLLHVDSSN-RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------ 649 (701)
Q Consensus 601 la~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------ 649 (701)
.++........ .....+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 3kfa_A 157 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS--DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234 (288)
T ss_dssp GGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC
T ss_pred cceeccCCccccccCCccccCcCChhhhccCCCCchh--hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCC
Confidence 99876533221 2223567889999998877777665 99999999985
Q ss_pred -------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 -------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 -------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
|+..+|.+|||+.++++.|+..
T Consensus 235 ~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 6666788888888888887654
No 152
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-35 Score=303.73 Aligned_cols=211 Identities=28% Similarity=0.458 Sum_probs=174.1
Q ss_pred hcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (701)
.++|++.+.||+|+||.||+|... ++.||||++.... ..+.+.+|+.++++++||||+++++++.+ ..++||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES-----ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT-----HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh-----HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 467999999999999999999874 7889999986432 24678999999999999999999999874 378999
Q ss_pred EccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC-eEEEeecCcccccc
Q 041034 529 EYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE-AFVADFGTARLLHV 607 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~-~kL~DFGla~~~~~ 607 (701)
||+++|+|.+++........+++..+..++.|+++||+|||+.+..||+||||||+||+++.++. +||+|||+++....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987655445889999999999999999999932239999999999999998886 79999999976542
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------------
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------------- 649 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------------- 649 (701)
. .....||+.|+|||++.+..++.+. ||||+|+++++
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKC--DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHH--HHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHH
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHH--HHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHH
Confidence 2 2334699999999999887777665 99999999984
Q ss_pred ------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 ------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 ------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+|||++++++.|+...
T Consensus 234 ~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 234 ESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 78889999999999999887644
No 153
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.6e-35 Score=301.22 Aligned_cols=196 Identities=24% Similarity=0.337 Sum_probs=154.5
Q ss_pred HhhhcCCccceEEeeccceEEEEEEcC----CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAELP----DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK 521 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (701)
....++|++.+.||+|+||.||+|... .+..||+|++.... .....+.+.+|+.++++++||||+++++++. .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~ 87 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 87 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-c
Confidence 345678999999999999999999653 24579999987643 2344678899999999999999999999985 4
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
+..++||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 162 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 162 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---
T ss_pred CccEEEEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccc
Confidence 568899999999999999976532 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCC-CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 602 ARLLHVDSS-NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 602 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
++....... ......+++.|+|||.+.+..++.+. ||||+|+++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~~l~ell 211 (281)
T 1mp8_A 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS--DVWMFGVCMWEIL 211 (281)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHH--HHHHHHHHHHHHH
T ss_pred ccccCcccccccccCCCcccccChhhcccCCCCCcc--CchHHHHHHHHHH
Confidence 987653322 12334577899999998877777665 9999999999644
No 154
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.8e-35 Score=305.87 Aligned_cols=199 Identities=25% Similarity=0.347 Sum_probs=168.7
Q ss_pred HhhhcCCccceEEeeccceEEEEEEc------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeee
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFC 518 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 518 (701)
....++|++.+.||+|+||.||+|.. .+++.||||+++.... ....+.+.+|+.+++++ +||||+++++++
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 96 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGAC 96 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEEEEE
Confidence 34567899999999999999999963 3578899999986543 23357889999999999 899999999999
Q ss_pred eeCcEEEEEEEccCCCCHHHHHhcCCC---------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCC
Q 041034 519 LHKRCMFFIYEYMERGSLFYVLRDDDE---------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISS 583 (701)
Q Consensus 519 ~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp 583 (701)
.+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ ||+||||||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 173 (313)
T 1t46_A 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 173 (313)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence 999999999999999999999976532 12489999999999999999999999 999999999
Q ss_pred CcEEEcCCCCeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 584 NNILLNSNLEAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 584 ~NIll~~~~~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
+||+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.+. ||||+|+++++++
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~ell 241 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES--DVWSYGIFLWELF 241 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_pred ceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHH--HHHHHHHHHHHHH
Confidence 9999999999999999999876543322 1233577899999998877777665 9999999999643
No 155
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.3e-35 Score=298.98 Aligned_cols=194 Identities=24% Similarity=0.381 Sum_probs=167.4
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
..++|++.+.||+|+||.||+|...+++.||+|++...... .+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 35789999999999999999998878889999999875433 26788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++..... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.++....
T Consensus 82 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp ECCCTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 999999999999976532 588999999999999999999999 999999999999999999999999999986532
Q ss_pred CC-CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 608 DS-SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 608 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
.. .......+++.|+|||.+.+..++.+. ||||+|+++++++.
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~ 200 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKS--DVWSFGVLMWEVFS 200 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHHT
T ss_pred ccccccccccccccccChhhhcCCCccchh--chhhhHHHHHHHhc
Confidence 11 111223577889999998777776654 99999999997654
No 156
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.5e-34 Score=320.16 Aligned_cols=204 Identities=24% Similarity=0.347 Sum_probs=177.1
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++.+.........+.+.+|+.++++++||||+++++++.+....|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 478999999999999999999664 6999999999764332222346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCC-ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 528 YEYMERGSLFYVLRDDDE-AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
|||++||+|.+++..... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999876432 33589999999999999999999999 99999999999999999999999999998876
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
.........+||+.|+|||++.+..++.+. |+||+|+++|+|+.+.|..
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~--DiwSlGvilyelltG~~PF 389 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGPF 389 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHH--HHHHHHHHHHHHHHSSCSS
T ss_pred CCCcccccccCCccccChhhhcCCCCChHH--hcCcchHHHHHHHhCCCCC
Confidence 544444455899999999999888887765 9999999999999887543
No 157
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.5e-34 Score=298.31 Aligned_cols=194 Identities=33% Similarity=0.458 Sum_probs=170.1
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..+.|++.+.||+|+||.||+|.. .+++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST--THHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH--HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 456799999999999999999965 578999999997654332 25778999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+....
T Consensus 98 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999999999753 589999999999999999999999 99999999999999999999999999998776
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
..........||+.|+|||.+.+..++.+. ||||+|+++++++.
T Consensus 171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~ 214 (303)
T 3a7i_A 171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKA--DIWSLGITAIELAR 214 (303)
T ss_dssp TTBCCBCCCCSCGGGCCHHHHTTCCBCTHH--HHHHHHHHHHHHHH
T ss_pred ccccccCccCCCcCccCHHHHhcCCCCchh--hhHHHHHHHHHHcc
Confidence 544444556799999999999887777665 99999999996333
No 158
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.6e-35 Score=326.27 Aligned_cols=220 Identities=27% Similarity=0.437 Sum_probs=188.3
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
++...++|++.+.||+|+||.||+|.+. +++.||||+++..... .+.+.+|+.++++++||||+++++++.+.+.
T Consensus 215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 290 (495)
T 1opk_A 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 290 (495)
T ss_dssp CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc----hHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 3445678999999999999999999765 4889999999865432 4778999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 291 ~~lv~E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 366 (495)
T 1opk_A 291 FYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSR 366 (495)
T ss_dssp CEEEEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred EEEEEEccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccce
Confidence 9999999999999999986432 2589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCC-CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH---------------------------------
Q 041034 604 LLHVDSS-NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA--------------------------------- 649 (701)
Q Consensus 604 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~--------------------------------- 649 (701)
....... ......+++.|+|||.+....++.+. ||||+|+++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~s--DvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (495)
T 1opk_A 367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS--DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 444 (495)
T ss_dssp CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHH--HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTC
T ss_pred eccCCceeecCCCcCCcceeCHhHHhcCCCCcHH--hHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 7643221 11223456789999998877777665 99999999985
Q ss_pred ----------cccCCCCCCCCHHHHHHHhhcCCCc
Q 041034 650 ----------CLRSKPKSRPTMQRISQELEGKTPM 674 (701)
Q Consensus 650 ----------cl~~~P~~Rpt~~~i~~~l~~~~~~ 674 (701)
||+.+|.+|||+.++++.|+.....
T Consensus 445 ~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 445 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 8888999999999999999887643
No 159
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=307.61 Aligned_cols=197 Identities=17% Similarity=0.234 Sum_probs=166.8
Q ss_pred hhhcCCccceEEeeccceEEEEEE------cCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC---CCceeeeeee
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAE------LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR---HRNIVKLYGF 517 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~ 517 (701)
...++|.+.+.||+|+||.||+|. ..+++.||||++.... ..++.+|+.+++.++ |+||++++++
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~ 135 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSA 135 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence 446789999999999999999993 4468899999997643 256777888888886 9999999999
Q ss_pred eeeCcEEEEEEEccCCCCHHHHHhcCC--CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC-----
Q 041034 518 CLHKRCMFFIYEYMERGSLFYVLRDDD--EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS----- 590 (701)
Q Consensus 518 ~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~----- 590 (701)
+...+..++||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ |||||||||+|||++.
T Consensus 136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~ 212 (365)
T 3e7e_A 136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQ 212 (365)
T ss_dssp EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC
T ss_pred eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCc
Confidence 999999999999999999999997421 123699999999999999999999998 9999999999999998
Q ss_pred ------CCCeEEEeecCccccccC--CCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 591 ------NLEAFVADFGTARLLHVD--SSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 591 ------~~~~kL~DFGla~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
++.+||+|||+|+.+... ........||+.|+|||++.+..++.+. ||||+|+++|+|+.+.
T Consensus 213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~elltg~ 282 (365)
T 3e7e_A 213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQI--DYFGVAATVYCMLFGT 282 (365)
T ss_dssp ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHH--HHHHHHHHHHHHHHSS
T ss_pred cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccc--cHHHHHHHHHHHHhCC
Confidence 899999999999765422 2233445799999999999988877765 9999999999876654
No 160
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.3e-34 Score=309.62 Aligned_cols=198 Identities=19% Similarity=0.274 Sum_probs=167.8
Q ss_pred hhcCCccceEEeec--cceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 448 ATEDFHIRYCIGTG--GYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 448 ~~~~y~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
..++|++.+.||+| +||.||+|+.. +++.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 45789999999999 99999999664 7999999999875433 34567888999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.+++...... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMD-GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999999765322 589999999999999999999999 999999999999999999999999999865
Q ss_pred cccCC-------CCceeecccccccCCCCCCC--CcCChhhHHHHHHHHHHHHHccc
Q 041034 605 LHVDS-------SNRTLRAGTYGYIAPDQRLS--PPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 605 ~~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
..... .......||+.|+|||++.+ ..++.+ .||||+|+++++|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~--~DiwslG~il~el~~ 232 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAK--SDIYSVGITACELAN 232 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTH--HHHHHHHHHHHHHHH
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcH--hHHHHHHHHHHHHHH
Confidence 43221 11223468999999999887 345555 499999999886443
No 161
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.8e-33 Score=305.10 Aligned_cols=306 Identities=29% Similarity=0.348 Sum_probs=158.0
Q ss_pred CEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEEC
Q 041034 38 SITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYL 117 (701)
Q Consensus 38 ~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 117 (701)
+++.|++++|.+++ ++. .+++|++|++++|.+++. |.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 92 ~L~~L~l~~n~l~~-lp~----~~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 92 HLESLVASCNSLTE-LPE----LPQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TCSEEECCSSCCSS-CCC----CCTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCEEEccCCcCCc-ccc----ccCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 44444554444443 221 124455555555555431 111 1455556666655554 44 3555566666666
Q ss_pred CCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCC
Q 041034 118 SNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGT 197 (701)
Q Consensus 118 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 197 (701)
++|++++ +|.. .++|++|+|++|++++ +| .++++++|+.|++++|.+++ +|... ++|++|++++|+++ .
T Consensus 161 ~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~ 229 (454)
T 1jl5_A 161 DNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-E 229 (454)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-S
T ss_pred CCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-c
Confidence 6665554 2322 2355566666665554 23 35556666666666665554 22221 35566666666655 3
Q ss_pred CCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCC
Q 041034 198 IPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKL 277 (701)
Q Consensus 198 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l 277 (701)
+| .++.+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. +++|+.|++++|++++. |.. .
T Consensus 230 lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~ 296 (454)
T 1jl5_A 230 LP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---P 296 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---C
T ss_pred cc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---C
Confidence 44 25556666666666666654 3322 2456666666666655 3332 25566666666666542 111 1
Q ss_pred CCCcEEEccCccCCCCCcccccCc-cceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEE
Q 041034 278 SNLQYLNLSSNLLSGQIPFAIGKL-FNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLD 356 (701)
Q Consensus 278 ~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ 356 (701)
++|+.|++++|.+++ ++ .+ ++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|+.|+
T Consensus 297 ~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~ 363 (454)
T 1jl5_A 297 PNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLH 363 (454)
T ss_dssp TTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEE
T ss_pred CcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEE
Confidence 456666666666653 11 22 477788888888875 5553 467888888888887 4565 367788888
Q ss_pred cccccCcc--cCCCCccc-----------------cccccccCCCCC--cCCCcCC
Q 041034 357 LSHNNLSG--TIPMTLHP-----------------MFLDMSFNNLEG--EIPTYLR 391 (701)
Q Consensus 357 ls~N~l~g--~~p~~~~~-----------------~~l~ls~N~l~g--~~p~~~~ 391 (701)
+++|+++| .+|..+.. ..||+++|+++| .+|.++.
T Consensus 364 L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~sl~ 419 (454)
T 1jl5_A 364 VEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPESVE 419 (454)
T ss_dssp CCSSCCSSCCCCCTTCCEEECCC---------------------------------
T ss_pred CCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchhhHh
Confidence 88888887 67765421 246666666665 5555443
No 162
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.9e-35 Score=308.20 Aligned_cols=224 Identities=21% Similarity=0.342 Sum_probs=188.7
Q ss_pred HHHHHhhhcCCccceEEeeccceEEEEEEcC------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeee
Q 041034 442 YEDLINATEDFHIRYCIGTGGYGSVYKAELP------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLY 515 (701)
Q Consensus 442 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 515 (701)
.++++...++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.+++.++||||++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC--HHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC--HHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 3455667789999999999999999999543 367899999976433 33356789999999999999999999
Q ss_pred eeeeeCcEEEEEEEccCCCCHHHHHhcCCC-------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE
Q 041034 516 GFCLHKRCMFFIYEYMERGSLFYVLRDDDE-------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL 588 (701)
Q Consensus 516 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll 588 (701)
+++.+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ ||+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 999999999999999999999999875321 12578999999999999999999999 99999999999999
Q ss_pred cCCCCeEEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-----------------
Q 041034 589 NSNLEAFVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA----------------- 649 (701)
Q Consensus 589 ~~~~~~kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~----------------- 649 (701)
+.++.+||+|||+++....... ......+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~~g~~p~~~~~~~~~ 249 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS--DVWSFGVVLWEIATLAEQPYQGLSNEQV 249 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHHHTSCCTTTTSCHHHH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchh--hHHHHHHHHHHHHhcCCCccccCCHHHH
Confidence 9999999999999986643321 11223568899999998877777665 99999999984
Q ss_pred --------------------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 --------------------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 --------------------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
|+..+|.+|||+.|+++.|++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 250 LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 78889999999999999998754
No 163
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.2e-34 Score=295.36 Aligned_cols=212 Identities=18% Similarity=0.317 Sum_probs=178.7
Q ss_pred hcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC--cEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK--RCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 526 (701)
.++|++.+.||+|+||.||+|... ++.||||+++..... ....+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCC-HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 568999999999999999999874 889999999875433 34457799999999999999999999999877 77899
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS--IVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g--ivH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ + ++||||||+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 9999999999999987542 2589999999999999999999998 7 99999999999999999999999998765
Q ss_pred cccCCCCceeecccccccCCCCCCCCcCChh-hHHHHHHHHHHHHH----------------------------------
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQK-IIQDIILVSTTALA---------------------------------- 649 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~Di~slg~i~~~---------------------------------- 649 (701)
... ....||+.|+|||.+.+...... ..+||||+|+++++
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS 237 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCC
Confidence 332 22468999999999877655431 23599999999995
Q ss_pred ---------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 ---------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 ---------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
||+.+|.+|||++++++.|++.
T Consensus 238 ~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 6777777777777777777653
No 164
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.2e-34 Score=293.51 Aligned_cols=208 Identities=23% Similarity=0.338 Sum_probs=174.6
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||+|++....... .+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 3567999999999999999999654 57899999997654433 4678999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE---cCCCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL---NSNLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll---~~~~~~kL~DFGla~ 603 (701)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 999999999999987654 589999999999999999999999 99999999999999 788999999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC-CCCCCCHHHHHHHh
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK-PKSRPTMQRISQEL 668 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~-P~~Rpt~~~i~~~l 668 (701)
...... ......||+.|+|||.+.+. ++.+. ||||+|+++++|+.+. |...++..++...+
T Consensus 158 ~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~--Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 219 (277)
T 3f3z_A 158 RFKPGK-MMRTKVGTPYYVSPQVLEGL-YGPEC--DEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI 219 (277)
T ss_dssp ECCTTS-CBCCCCSCTTTCCHHHHTTC-BCTTH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred eccCcc-chhccCCCCCccChHHhccc-CCchh--hehhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 765332 33445799999999998664 55554 9999999999988775 33444444444443
No 165
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.4e-34 Score=304.68 Aligned_cols=217 Identities=23% Similarity=0.421 Sum_probs=180.7
Q ss_pred hhcCCccceEEeeccceEEEEEEc--------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeee
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL--------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFC 518 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 518 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 457899999999999999999965 246789999997654 234457789999999999 899999999999
Q ss_pred eeCcEEEEEEEccCCCCHHHHHhcCCC-------------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCc
Q 041034 519 LHKRCMFFIYEYMERGSLFYVLRDDDE-------------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNN 585 (701)
Q Consensus 519 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~N 585 (701)
.+.+..++||||+++|+|.+++..... ...+++..+..++.||+.||+|||++ ||+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 999999999999999999999986532 12488999999999999999999999 99999999999
Q ss_pred EEEcCCCCeEEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------
Q 041034 586 ILLNSNLEAFVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------- 649 (701)
Q Consensus 586 Ill~~~~~~kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------- 649 (701)
|+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.+. ||||+|+++++
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS--DVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHH--HHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHH--HHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 9999999999999999987653322 12233577889999998777776665 99999999985
Q ss_pred -----------------------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 -----------------------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 -----------------------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
||..+|.+||++.++++.|++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 266 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 6667788888888888877754
No 166
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.5e-33 Score=305.40 Aligned_cols=311 Identities=28% Similarity=0.352 Sum_probs=227.2
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEE
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLY 116 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 116 (701)
..++.|++++|.+++ ++.. .++|++|++++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|++|+
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIA 179 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEE
T ss_pred CCCcEEECCCCccCc-ccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEE
Confidence 679999999999885 3221 2789999999999997 67 59999999999999999996 56544 5999999
Q ss_pred CCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCC
Q 041034 117 LSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG 196 (701)
Q Consensus 117 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 196 (701)
|++|++++ +| .++.+++|++|++++|++++ +|... ++|++|++++|.++ .+| .+..+++|++|++++|++++
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc
Confidence 99999997 45 69999999999999999997 34332 58999999999998 566 48999999999999999996
Q ss_pred CCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCC
Q 041034 197 TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSK 276 (701)
Q Consensus 197 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~ 276 (701)
+|.. +++|++|++++|++++ +|.. .++|++|++++|++++. |.. .++|+.|++++|++++. +. +
T Consensus 252 -l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~~-~-- 315 (454)
T 1jl5_A 252 -LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-CD-L-- 315 (454)
T ss_dssp -CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-CC-C--
T ss_pred -cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-cC-C--
Confidence 4543 4789999999999996 5554 37899999999999983 321 26899999999999963 32 1
Q ss_pred CCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCC--CCCcccccc-----
Q 041034 277 LSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDG--TIPPEIGKI----- 349 (701)
Q Consensus 277 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l----- 349 (701)
.++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|.+++.+
T Consensus 316 ~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~ 387 (454)
T 1jl5_A 316 PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSH 387 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-
T ss_pred cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhccc
Confidence 2589999999999996 5654 589999999999999 5776 47899999999999999 899999888
Q ss_pred --------ccCCeEEcccccCcc--cCCCCccccccccccCCCCCcCCCcCCC
Q 041034 350 --------LLLQNLDLSHNNLSG--TIPMTLHPMFLDMSFNNLEGEIPTYLRD 392 (701)
Q Consensus 350 --------~~L~~l~ls~N~l~g--~~p~~~~~~~l~ls~N~l~g~~p~~~~~ 392 (701)
++|+.|++++|+++| .+|.++. .+.+.+|.+.+.+|.+...
T Consensus 388 ~~~i~~~~~~L~~L~ls~N~l~~~~~iP~sl~--~L~~~~~~~~~~~~~~~~~ 438 (454)
T 1jl5_A 388 LAEVPELPQNLKQLHVETNPLREFPDIPESVE--DLRMNSERVVDPYEFAHET 438 (454)
T ss_dssp -----------------------------------------------------
T ss_pred ccccccccCcCCEEECCCCcCCccccchhhHh--heeCcCcccCCccccCHHH
Confidence 889999999999998 8887654 4677888898887766543
No 167
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.9e-35 Score=299.27 Aligned_cols=198 Identities=24% Similarity=0.418 Sum_probs=166.2
Q ss_pred HHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 444 DLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 444 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
+++...++|++.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.+ +.
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 81 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EP 81 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCccc----HHHHHHHHHHHHhCCCcCcceEEEEEcC-CC
Confidence 344566889999999999999999998888889999999765432 3678899999999999999999999864 45
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++++|.+++.... ...+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.++
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 889999999999999997532 12589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCC-CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 604 LLHVDSS-NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 604 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
....... ......+++.|+|||.+.+..++.+. ||||+|+++++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~ 205 (279)
T 1qpc_A 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS--DVWSFGILLTEIVT 205 (279)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHH--HHHHHHHHHHHHHT
T ss_pred cccCcccccccCCCCccCccChhhhccCCCCchh--hhHHHHHHHHHHHh
Confidence 7643221 11223467889999998777766665 99999999996443
No 168
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.8e-35 Score=308.48 Aligned_cols=193 Identities=20% Similarity=0.313 Sum_probs=164.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|... +++.||||++...... ..+|++++.++ +||||+++++++.+.+..|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 4678999999999999999999654 6899999999765432 34678888887 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC----CCeEEEeecC
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN----LEAFVADFGT 601 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~----~~~kL~DFGl 601 (701)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||++.++ +.+||+|||+
T Consensus 93 lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999999997654 589999999999999999999999 99999999999998543 3599999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
++.............||+.|+|||++.+..++.+. ||||+|+++|+++.+.+
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~g~~ 218 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAAC--DIWSLGVLLYTMLTGYT 218 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHSSC
T ss_pred cccCcCCCCceeccCCCccccCHHHhcCCCCCCcc--CeeeHhHHHHHHhcCCC
Confidence 98776554445556799999999998776665554 99999999998666553
No 169
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-34 Score=306.93 Aligned_cols=205 Identities=25% Similarity=0.357 Sum_probs=165.1
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCcc--ChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETE--DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK 521 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (701)
+....++|++.+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 456678899999999999999999965 56889999998754221 122357889999999999999999999999999
Q ss_pred cEEEEEEEccCCCCHHHHHhcCC-------------------------------------CccCCCHHHHHHHHHHHHHH
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDD-------------------------------------EAIELNWTRRVNIVKSVAHA 564 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~qi~~~ 564 (701)
+..++||||+++|+|.+++.... ....+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999985210 01124677888999999999
Q ss_pred HHHHhcCCCCCeEecCCCCCcEEEcCCC--CeEEEeecCccccccCCC----CceeecccccccCCCCCCC--CcCChhh
Q 041034 565 LSYLHHDCTPSIVHRDISSNNILLNSNL--EAFVADFGTARLLHVDSS----NRTLRAGTYGYIAPDQRLS--PPVNQKI 636 (701)
Q Consensus 565 L~~LH~~~~~givH~Dlkp~NIll~~~~--~~kL~DFGla~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~ 636 (701)
|+|||++ +|+||||||+||+++.++ .+||+|||+|+.+..... ......||+.|+|||.+.+ ..++.+
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~- 256 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK- 256 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH-
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH-
Confidence 9999999 999999999999998766 899999999987643221 2344579999999999865 344444
Q ss_pred HHHHHHHHHHHHHcccCC
Q 041034 637 IQDIILVSTTALACLRSK 654 (701)
Q Consensus 637 ~~Di~slg~i~~~cl~~~ 654 (701)
.||||+|+++++++.+.
T Consensus 257 -~DiwslG~il~el~~g~ 273 (345)
T 3hko_A 257 -CDAWSAGVLLHLLLMGA 273 (345)
T ss_dssp -HHHHHHHHHHHHHHHSS
T ss_pred -HHHHHHHHHHHHHHHCC
Confidence 49999999999877665
No 170
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.2e-35 Score=305.82 Aligned_cols=214 Identities=23% Similarity=0.430 Sum_probs=174.5
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcE----EEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKV----VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+..... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 467999999999999999999653 4443 58888765432 223478899999999999999999999998765
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 7889999999999999987543 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 604 LLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 604 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
........ .....+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 243 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS--DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchh--hhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCcc
Confidence 76543322 2234568899999999888777765 99999999985
Q ss_pred -----------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 -----------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 -----------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||+.+|.+||++.++++.++...
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 77788999999999999887643
No 171
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.3e-34 Score=319.40 Aligned_cols=203 Identities=23% Similarity=0.309 Sum_probs=175.3
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .+|+.||+|++.............+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 457899999999999999999965 4799999999976432222224667899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+|+...
T Consensus 262 VmEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999999976542 2489999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
.. ......+||+.|+|||++.+..++.+. ||||+|+++|+|+.+.|..
T Consensus 338 ~~-~~~~~~~GT~~Y~APEvl~~~~~~~~~--DiwSLGvilyeLltG~~PF 385 (576)
T 2acx_A 338 EG-QTIKGRVGTVGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQSPF 385 (576)
T ss_dssp TT-CCEECCCSCGGGCCHHHHTTCEESSHH--HHHHHHHHHHHHHHSSCSS
T ss_pred cC-ccccccCCCccccCHHHHcCCCCCccc--hHHHHHHHHHHHHhCCCCC
Confidence 33 233445899999999999888777665 9999999999999887543
No 172
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-34 Score=297.69 Aligned_cols=209 Identities=26% Similarity=0.470 Sum_probs=175.6
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 468999999999999999999654 6889999998754322222346788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999997654 589999999999999999999999 999999999999999999999999999976542
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC-CCCCCCHHHHHHH
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK-PKSRPTMQRISQE 667 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~-P~~Rpt~~~i~~~ 667 (701)
. ......|++.|+|||.+.+..++.+. ||||+|+++++++.+. |...++..+..+.
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 223 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKV--DLWCAGVLCYEFLVGMPPFDSPSHTETHRR 223 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTH--HHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred c--ccccccCCCCcCCHHHhccCCCCccc--chhhHHHHHHHHHHCCCCCCCCCHhHHHHH
Confidence 2 23345799999999999888777665 9999999999988776 3333444444433
No 173
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.3e-34 Score=297.82 Aligned_cols=214 Identities=25% Similarity=0.411 Sum_probs=176.0
Q ss_pred hcCCccceEEeeccceEEEEEEcCC----CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeee-eCcE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPD----GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL-HKRC 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~ 523 (701)
..+|++.+.||+|+||.||+|...+ ...||+|.+.... .....+.+.+|+.++++++||||+++++++. .++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 4568899999999999999996532 2358999987643 3344678899999999999999999999854 5567
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+|+
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 8999999999999999976432 588999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCC----CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH------------------------------
Q 041034 604 LLHVDS----SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------ 649 (701)
Q Consensus 604 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------ 649 (701)
...... .......+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKS--DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 254 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHH--HHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC
Confidence 764322 122334578899999999887777665 99999999985
Q ss_pred -------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 -------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 -------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
|+..+|.+|||+.++++.|++.
T Consensus 255 ~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 255 EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 6677778888888888877653
No 174
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3e-34 Score=299.84 Aligned_cols=189 Identities=22% Similarity=0.350 Sum_probs=160.9
Q ss_pred cCC-ccceEEeeccceEEEEEEc-----CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee--C
Q 041034 450 EDF-HIRYCIGTGGYGSVYKAEL-----PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH--K 521 (701)
Q Consensus 450 ~~y-~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~ 521 (701)
++| ++.+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|++++++++||||+++++++.+ .
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA 107 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence 344 9999999999999998854 257899999998653 23446788999999999999999999999987 4
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred ceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccc
Confidence 6789999999999999999764 389999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCC---CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 602 ARLLHVDSS---NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 602 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
++....... ......+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~ 229 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS--DVWSFGVTLYE 229 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHH--HHHHHHHHHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHH--HHHHHHHHHHH
Confidence 987754322 12334578889999999877777655 99999999885
No 175
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-34 Score=298.09 Aligned_cols=193 Identities=26% Similarity=0.425 Sum_probs=152.3
Q ss_pred HhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
+...++|++.+.||+|+||.||+|... ..||+|+++.... .....+.+.+|+.++++++||||+++++++ .....+
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~ 95 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA 95 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence 445678999999999999999999864 3699999976543 344467899999999999999999999975 455689
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 96 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 96 IVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEEEecCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccc
Confidence 99999999999999965432 589999999999999999999999 9999999999999999999999999999865
Q ss_pred ccC--CCCceeecccccccCCCCCC---CCcCChhhHHHHHHHHHHHHH
Q 041034 606 HVD--SSNRTLRAGTYGYIAPDQRL---SPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 606 ~~~--~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~~Di~slg~i~~~ 649 (701)
... ........||+.|+|||.+. +.+++.+. ||||+|+++++
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Di~slG~il~e 217 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS--DVYAFGIVLYE 217 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHH--HHHHHHHHHHH
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCccc--chHHHHHHHHH
Confidence 421 22233456999999999886 44455554 99999999986
No 176
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.8e-34 Score=295.43 Aligned_cols=200 Identities=21% Similarity=0.322 Sum_probs=167.0
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|... +++.||+|++........ ....+.+|+..+..+ +||||+++++++.+++..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-HHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-HHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 3578999999999999999999664 799999999987544332 346788999999999 8999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCC-ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC-------------
Q 041034 526 FIYEYMERGSLFYVLRDDDE-AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN------------- 591 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~------------- 591 (701)
+||||+++++|.+++..... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999976421 12589999999999999999999999 99999999999999844
Q ss_pred ------CCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 592 ------LEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 592 ------~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
..+||+|||.+....... ...||+.|+|||.+.+..... ...||||+|+++++++.+.|.
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~-~~~Di~slG~il~~l~~~~~~ 230 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHL-PKADIFALALTVVCAAGAEPL 230 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTH-HHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCC-chhhHHHHHHHHHHHhcCCCC
Confidence 479999999998764322 235999999999987653322 235999999999998877653
No 177
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.1e-35 Score=305.61 Aligned_cols=215 Identities=22% Similarity=0.372 Sum_probs=177.4
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcE----EEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKV----VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+....... ..+.+.+|+.++++++||||+++++++. .+.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ--SFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS--CBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH--HHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 467999999999999999999653 4544 7888775443221 1245678999999999999999999986 456
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+|+
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHRG--ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSGG--GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHccc--cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 8899999999999999976532 588899999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 604 LLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 604 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
....... ......+|+.|+|||++.+..++.+. ||||+|+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 241 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS--DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI 241 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTT
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhh--HhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCc
Confidence 7754322 23445688899999999877777665 99999999985
Q ss_pred -----------cccCCCCCCCCHHHHHHHhhcCCC
Q 041034 650 -----------CLRSKPKSRPTMQRISQELEGKTP 673 (701)
Q Consensus 650 -----------cl~~~P~~Rpt~~~i~~~l~~~~~ 673 (701)
||..+|.+||++.++++.|+....
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 777889999999999999987553
No 178
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-34 Score=316.68 Aligned_cols=194 Identities=25% Similarity=0.354 Sum_probs=152.5
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee-----Cc
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH-----KR 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 522 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++.... .+....+++.+|+.+++.++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 47899999999999999999965 478999999997643 234446788999999999999999999999854 35
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
..|+||||+. ++|.+++.... .+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 7899999985 69999997654 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCC---------------------------CceeecccccccCCCCC-CCCcCChhhHHHHHHHHHHHHHccc
Q 041034 603 RLLHVDSS---------------------------NRTLRAGTYGYIAPDQR-LSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 603 ~~~~~~~~---------------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
+....... ..+..+||+.|+|||++ ....++.+. ||||+||++|+|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~--DiwSlG~il~ellt 279 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAI--DVWSIGCIFAELLN 279 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHH--HHHHHHHHHHHHHT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHh--HHHHHHHHHHHHHH
Confidence 87642211 22345789999999975 455566665 99999999998764
No 179
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-34 Score=295.75 Aligned_cols=197 Identities=26% Similarity=0.400 Sum_probs=162.5
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|.+.+.||+|+||.||+|.. .+++.||+|++........ .+.+.+|++++++++||||+++++++.+....++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP--MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSC--HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchh--HHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 46799999999999999999965 4689999999987543322 47789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCC-CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE---cCCCCeEEEeecCcc
Q 041034 528 YEYMERGSLFYVLRDDD-EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL---NSNLEAFVADFGTAR 603 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll---~~~~~~kL~DFGla~ 603 (701)
|||+++|+|.+++.... ....+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999886431 123589999999999999999999999 99999999999999 456889999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
...... ......||+.|+|||++.+ .++.+ .||||+|+++++++.+.
T Consensus 176 ~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~--~Di~slG~il~~ll~g~ 222 (285)
T 3is5_A 176 LFKSDE-HSTNAAGTALYMAPEVFKR-DVTFK--CDIWSAGVVMYFLLTGC 222 (285)
T ss_dssp C-----------CTTGGGCCHHHHTT-CCCHH--HHHHHHHHHHHHHHHSS
T ss_pred ecCCcc-cCcCcccccCcCChHHhcc-CCCcc--cCeehHHHHHHHHHhCC
Confidence 765332 2344579999999998754 45554 49999999999877765
No 180
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.8e-35 Score=320.67 Aligned_cols=217 Identities=28% Similarity=0.456 Sum_probs=176.7
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
++...++|++.+.||+|+||.||+|.+.++..||||+++..... .+.+.+|+.++++++||||+++++++.+ +..
T Consensus 179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~ 253 (452)
T 1fmk_A 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 253 (452)
T ss_dssp SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence 34456789999999999999999998887888999999865432 3678999999999999999999999876 668
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 329 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred EEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCcccee
Confidence 99999999999999997532 12589999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCC-CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH----------------------------------
Q 041034 605 LHVDSS-NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA---------------------------------- 649 (701)
Q Consensus 605 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~---------------------------------- 649 (701)
...... ......+++.|+|||.+....++.+. ||||+|+++++
T Consensus 330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~s--DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~ 407 (452)
T 1fmk_A 330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS--DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 407 (452)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSC
T ss_pred cCCCceecccCCcccccccCHhHHhcCCCCccc--cHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 643221 12233567889999998877777665 99999999986
Q ss_pred ---------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 ---------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 ---------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+|||++++++.|+...
T Consensus 408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 66677777777777777776554
No 181
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=307.59 Aligned_cols=191 Identities=25% Similarity=0.346 Sum_probs=159.5
Q ss_pred ccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEEEcc
Q 041034 453 HIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYM 531 (701)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 531 (701)
...+.||+|+||.||+|.. .+|+.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 3367899999999999965 5799999999986542 23577899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE--cCCCCeEEEeecCccccccCC
Q 041034 532 ERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL--NSNLEAFVADFGTARLLHVDS 609 (701)
Q Consensus 532 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll--~~~~~~kL~DFGla~~~~~~~ 609 (701)
++++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+++.+....
T Consensus 169 ~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 169 DGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999999887543 2589999999999999999999999 99999999999999 567899999999998765332
Q ss_pred CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 610 SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 610 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
......||+.|+|||++.+..++.+. ||||+|+++++++.+.
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~elltg~ 285 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGL 285 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHH--HHHHHHHHHHHHHHSS
T ss_pred -ccccccCCCcEeChhhccCCCCCcHH--hHHHHHHHHHHHHhCC
Confidence 23345799999999999887777765 9999999999866655
No 182
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.4e-34 Score=309.93 Aligned_cols=199 Identities=25% Similarity=0.380 Sum_probs=156.3
Q ss_pred hhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCcc-----ChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETE-----DSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
...++|.+.+.||+|+||.||+|.. .+++.||||++...... .......+.+|+.++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 3468899999999999999999955 56899999998764321 1122235789999999999999999999975
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC---CCeEEE
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN---LEAFVA 597 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~---~~~kL~ 597 (701)
.+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.+ +.+||+
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred cCceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 455899999999999999887654 589999999999999999999999 99999999999999754 459999
Q ss_pred eecCccccccCCCCceeecccccccCCCCCCC---CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 598 DFGTARLLHVDSSNRTLRAGTYGYIAPDQRLS---PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 598 DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
|||+|+..... .......||+.|+|||++.+ ..++.+ .||||+|+++++|+.+.+
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~--~DiwslG~il~~lltg~~ 342 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRA--VDCWSLGVILFICLSGYP 342 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHH--HHHHHHHHHHHHHHHSSC
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCch--hhhHhHHHHHHHHHHCCC
Confidence 99999876532 23344679999999999864 334444 599999999998766553
No 183
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.6e-34 Score=293.94 Aligned_cols=211 Identities=23% Similarity=0.374 Sum_probs=167.1
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||||++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 478999999999999999999664 7999999998754322223356789999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999997654 589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC-CCCCCCHHHHHHH
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK-PKSRPTMQRISQE 667 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~-P~~Rpt~~~i~~~ 667 (701)
.. ......+++.|+|||.+.+..+... ..|+||+|+++++++.+. |....+..++.+.
T Consensus 164 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~-~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 222 (276)
T 2h6d_A 164 GE-FLRTSCGSPNYAAPEVISGRLYAGP-EVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 222 (276)
T ss_dssp --------------CCTGGGTTSCCCHH-HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred Cc-ceecccCCccccCHHHHcCCCCCCc-cchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 32 2334568999999999887665322 359999999999987765 3333344444433
No 184
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=305.62 Aligned_cols=190 Identities=22% Similarity=0.379 Sum_probs=158.1
Q ss_pred hcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCC--CceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH--RNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++| |||+++++++.+.+..++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 467999999999999999999888899999999986543 34446788999999999986 999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
|||+ .+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+|+...
T Consensus 87 v~e~-~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VMEC-GNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EECC-CSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEeC-CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 9995 5779999998754 589999999999999999999999 999999999999997 6789999999998765
Q ss_pred cCCC--CceeecccccccCCCCCCC-----------CcCChhhHHHHHHHHHHHHH
Q 041034 607 VDSS--NRTLRAGTYGYIAPDQRLS-----------PPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 607 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~~Di~slg~i~~~ 649 (701)
.... ......||+.|+|||.+.+ ..++.+ .||||+|+++++
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~--~DiwslG~il~e 212 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK--SDVWSLGCILYY 212 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHH--HHHHHHHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCch--hhHHHHHHHHHH
Confidence 4322 2234579999999998754 344555 499999999985
No 185
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.3e-34 Score=306.60 Aligned_cols=189 Identities=23% Similarity=0.356 Sum_probs=152.3
Q ss_pred hcCCccc-eEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHh-cCCCCceeeeeeeeee----C
Q 041034 449 TEDFHIR-YCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLS-TVRHRNIVKLYGFCLH----K 521 (701)
Q Consensus 449 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~ 521 (701)
.++|.+. +.||+|+||.||+|.. .+++.||||++... ..+.+|+.++. ..+||||+++++++.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 4567776 7899999999999965 46899999999642 45677888874 4589999999999875 5
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC---CCCeEEEe
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---NLEAFVAD 598 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---~~~~kL~D 598 (701)
...|+||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ ||+||||||+|||++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 678999999999999999986532 2589999999999999999999999 9999999999999987 78999999
Q ss_pred ecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 599 FGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 599 FGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
||+++..... ......+||+.|+|||++.+..++.+. ||||+|+++|+++.
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~ell~ 258 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIMYILLC 258 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHH--HHHHHHHHHHHHHH
T ss_pred cccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcc--cHHHHHHHHHHHHh
Confidence 9999876432 223456799999999999888887765 99999999986433
No 186
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.7e-34 Score=291.35 Aligned_cols=198 Identities=24% Similarity=0.360 Sum_probs=169.6
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 3578999999999999999999654 7899999999755432 234778999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 999999999999987543 589999999999999999999999 99999999999999999999999999998764
Q ss_pred cCC--CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 607 VDS--SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 607 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
... .......||+.|+|||.+.+..+... ..||||+|+++++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~~Di~slG~il~~l~~g~ 205 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAE-PVDVWSCGIVLTAMLAGE 205 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHH-HHHHHHHHHHHHHHHHSS
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCC-cchHHHHHHHHHHHHhCC
Confidence 322 22334568999999999987665332 259999999999877765
No 187
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.8e-34 Score=310.39 Aligned_cols=195 Identities=26% Similarity=0.365 Sum_probs=162.9
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK----- 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ......+++.+|+.+++.++||||+++++++...
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 367899999999999999999965 468899999997643 2344467889999999999999999999999776
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
...|+||||+++ +|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIADS-DLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCSE-EHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCCc-CHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 579999999975 9999997654 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCC----------------------CceeecccccccCCCCC-CCCcCChhhHHHHHHHHHHHHHccc
Q 041034 602 ARLLHVDSS----------------------NRTLRAGTYGYIAPDQR-LSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 602 a~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
|+....... ..+..+||+.|+|||++ ....++.+. ||||+||++++|+.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~--DiwSlG~il~ell~ 247 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI--DIWSTGCIFAELLN 247 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHH--HHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCccc--ccchHHHHHHHHHh
Confidence 987653321 12456799999999985 445566555 99999999988774
No 188
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=4.7e-35 Score=299.95 Aligned_cols=200 Identities=29% Similarity=0.438 Sum_probs=166.6
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee--CcEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH--KRCMF 525 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 525 (701)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++.+ ....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 578999999999999999999654 7899999999865433 3446788999999999999999999998754 66899
Q ss_pred EEEEccCCCCHHHHHhcCC-CccCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEecCCCCCcEEEcCCCCeEEEee
Q 041034 526 FIYEYMERGSLFYVLRDDD-EAIELNWTRRVNIVKSVAHALSYLHHDCTPS-----IVHRDISSNNILLNSNLEAFVADF 599 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g-----ivH~Dlkp~NIll~~~~~~kL~DF 599 (701)
+||||+++++|.+++.... ....+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999997532 123489999999999999999999998 7 999999999999999999999999
Q ss_pred cCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
|.++.............||+.|+|||.+.+..++.+. ||||+|+++++++.+.
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~ 213 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKS--DIWSLGCLLYELCALM 213 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHH--HHHHHHHHHHHHHHSS
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchh--hHHHHHHHHHHHHHCC
Confidence 9998765433223345689999999999887777665 9999999999866554
No 189
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=297.74 Aligned_cols=223 Identities=23% Similarity=0.379 Sum_probs=182.5
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee----Cc
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH----KR 522 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~ 522 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC---HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 356899999999999999999965 579999999986532 3445788999999999999999999999873 44
Q ss_pred EEEEEEEccCCCCHHHHHhcC-CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 523 CMFFIYEYMERGSLFYVLRDD-DEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
..++||||+++|+|.+++... .....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 789999999999999998752 1123689999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCC---------ceeecccccccCCCCCCCCc---CChhhHHHHHHHHHHHHH--------------------
Q 041034 602 ARLLHVDSSN---------RTLRAGTYGYIAPDQRLSPP---VNQKIIQDIILVSTTALA-------------------- 649 (701)
Q Consensus 602 a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~~~~Di~slg~i~~~-------------------- 649 (701)
++........ .....||+.|+|||.+.+.. ++.+ .||||+|+++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~--~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 258 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDER--TDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTH--HHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCch--hhHHHHHHHHHHHHhCCCChhhhhcccchhhH
Confidence 8765321111 11234799999999987654 3444 599999999984
Q ss_pred ------------------------cccCCCCCCCCHHHHHHHhhcCCCccchh
Q 041034 650 ------------------------CLRSKPKSRPTMQRISQELEGKTPMKKGL 678 (701)
Q Consensus 650 ------------------------cl~~~P~~Rpt~~~i~~~l~~~~~~~~~~ 678 (701)
||..+|.+||++.++++.|+...+..+..
T Consensus 259 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~ 311 (317)
T 2buj_A 259 AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311 (317)
T ss_dssp HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC-
T ss_pred HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCC
Confidence 88889999999999999999887655443
No 190
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-34 Score=301.94 Aligned_cols=219 Identities=29% Similarity=0.418 Sum_probs=178.1
Q ss_pred hcCCccceEEeeccceEEEEEEcCC-----CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPD-----GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
.++|++.+.||+|+||.||+|.... +..||||+++.... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 5678889999999999999996532 24599999976542 3345678999999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 9999999999999999976432 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCCC---ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------------------------
Q 041034 604 LLHVDSSN---RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------- 649 (701)
Q Consensus 604 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------- 649 (701)
........ .....+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 273 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS--DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM 273 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHH--HHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCT
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchh--hhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcc
Confidence 76533221 1223467889999999877777765 99999999985
Q ss_pred ------------cccCCCCCCCCHHHHHHHhhcCCCccc
Q 041034 650 ------------CLRSKPKSRPTMQRISQELEGKTPMKK 676 (701)
Q Consensus 650 ------------cl~~~P~~Rpt~~~i~~~l~~~~~~~~ 676 (701)
||..+|.+||++.++++.|+.......
T Consensus 274 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 777889999999999998876554333
No 191
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.6e-34 Score=303.51 Aligned_cols=200 Identities=23% Similarity=0.361 Sum_probs=160.5
Q ss_pred hhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
...++|++.+.||+|+||.||+|.. .+++.||||+++..... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 4467899999999999999999954 57899999999765432 233466789999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc-----CCCCeEEEeec
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN-----SNLEAFVADFG 600 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~-----~~~~~kL~DFG 600 (701)
+||||+++ +|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||
T Consensus 110 lv~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99999985 9999998754 589999999999999999999999 999999999999994 45569999999
Q ss_pred CccccccCCCCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccCCCC
Q 041034 601 TARLLHVDSSNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 601 la~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
+|+.............||+.|+|||++.+.. ++.+. ||||+|+++++++.+.|.
T Consensus 183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~ell~g~~p 237 (329)
T 3gbz_A 183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSV--DIWSIACIWAEMLMKTPL 237 (329)
T ss_dssp HHHHHC-----------CCTTCCHHHHTTCCCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHH--HHHHHHHHHHHHHHCCCC
Confidence 9987765444455567899999999987644 55554 999999999999988754
No 192
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5e-34 Score=312.94 Aligned_cols=194 Identities=25% Similarity=0.321 Sum_probs=160.1
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK----- 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ......+++.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 357899999999999999999954 568999999997653 2344467889999999999999999999998654
Q ss_pred -cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 522 -RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 522 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
...|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 467999999987 57666643 388999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 601 TARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 601 la~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
+|+..... ......+||+.|+|||++.+..++.+. ||||+|+++++|+.+.
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwSlG~il~ell~g~ 260 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 260 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTH--HHHHHHHHHHHHHHSS
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHH--HHHHHHHHHHHHHhCC
Confidence 99876532 234456799999999999998888775 9999999998776544
No 193
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5e-34 Score=292.94 Aligned_cols=197 Identities=23% Similarity=0.363 Sum_probs=166.4
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccC---hHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETED---SAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
.++|++.+.||+|+||.||+|... +++.||+|+++...... ....+.+.+|+.++++++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999665 68999999987654321 11247789999999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC----CeEEEeec
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL----EAFVADFG 600 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~----~~kL~DFG 600 (701)
++||||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 99999999999999997643 589999999999999999999999 999999999999998876 89999999
Q ss_pred CccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 601 TARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 601 la~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
.+....... ......||+.|+|||.+.+..++.+. ||||+|+++++++.+.
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~ 208 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEA--DMWSIGVITYILLSGA 208 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSS
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcch--hhhhHHHHHHHHHHCC
Confidence 998764332 23345699999999999887777665 9999999999866654
No 194
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-34 Score=299.47 Aligned_cols=198 Identities=27% Similarity=0.427 Sum_probs=159.5
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC--CCCceeeeeeeeeeC-
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV--RHRNIVKLYGFCLHK- 521 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~- 521 (701)
-....++|++.+.||+|+||.||+|... ++.||||++.... ...+.+|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 3445678999999999999999999875 8999999986432 13344555555554 899999999999877
Q ss_pred ---cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCcEEEcCCCC
Q 041034 522 ---RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC-----TPSIVHRDISSNNILLNSNLE 593 (701)
Q Consensus 522 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~givH~Dlkp~NIll~~~~~ 593 (701)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+++ .++|+||||||+||+++.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 7899999999999999999764 4899999999999999999999651 338999999999999999999
Q ss_pred eEEEeecCccccccCCCC----ceeecccccccCCCCCCCCcCChh----hHHHHHHHHHHHHHcccC
Q 041034 594 AFVADFGTARLLHVDSSN----RTLRAGTYGYIAPDQRLSPPVNQK----IIQDIILVSTTALACLRS 653 (701)
Q Consensus 594 ~kL~DFGla~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~----~~~Di~slg~i~~~cl~~ 653 (701)
+||+|||+|+.+...... .....||+.|+|||++.+...... ..+||||+|+++|+++++
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 999999999876433222 123479999999999877655543 235999999999876544
No 195
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2e-34 Score=307.10 Aligned_cols=215 Identities=17% Similarity=0.273 Sum_probs=175.6
Q ss_pred hhcCCccceEEeeccceEEEEEEcCC------CcEEEEEEecCCCccChHH--------HHHHHHHHHHHhcCCCCceee
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPD------GKVVALKKLHQSETEDSAF--------VESFQNEARVLSTVRHRNIVK 513 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~--------~~~~~~E~~~l~~l~h~niv~ 513 (701)
..++|++.+.||+|+||.||+|.+.. ++.||||++.......... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 45689999999999999999997653 4789999987654211100 112345666778889999999
Q ss_pred eeeeeeeC----cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc
Q 041034 514 LYGFCLHK----RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN 589 (701)
Q Consensus 514 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~ 589 (701)
+++++... ...++||||+ +++|.+++..... .+++..+..++.||+.||+|||++ ||+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99998764 4589999999 9999999987532 589999999999999999999999 999999999999999
Q ss_pred --CCCCeEEEeecCccccccCCCC-------ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-----------
Q 041034 590 --SNLEAFVADFGTARLLHVDSSN-------RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA----------- 649 (701)
Q Consensus 590 --~~~~~kL~DFGla~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~----------- 649 (701)
.++.+||+|||+|+.+...... .....||+.|+|||++.+..++.+. ||||+|+++|+
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRG--DLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSCCTTGGG
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchh--hHHHHHHHHHHHHhCCCCcccc
Confidence 8899999999999876533221 1234599999999999888877765 99999999984
Q ss_pred -----------------------------------------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -----------------------------------------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -----------------------------------------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
||..+|.+||+++++.+.|+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 265 LKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp TTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 778899999999999988764
No 196
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.8e-34 Score=304.65 Aligned_cols=214 Identities=20% Similarity=0.238 Sum_probs=179.0
Q ss_pred cccHHHHHhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-----CCcee
Q 041034 439 KILYEDLINATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-----HRNIV 512 (701)
Q Consensus 439 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv 512 (701)
.+++++.....++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+..|+.+++.++ ||||+
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 344555556678999999999999999999965 56899999999743 233466788999999986 99999
Q ss_pred eeeeeeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC--
Q 041034 513 KLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS-- 590 (701)
Q Consensus 513 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~-- 590 (701)
++++++...+..++||||+ +++|.+++...... .+++..+..++.||+.||+|||++ ||+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN-GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTT
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccc
Confidence 9999999999999999999 88999999875432 589999999999999999999999 9999999999999975
Q ss_pred -----------------------CCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHH
Q 041034 591 -----------------------NLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTA 647 (701)
Q Consensus 591 -----------------------~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~ 647 (701)
++.+||+|||+|+..... .....||+.|+|||++.+..++.+. ||||+|+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il 249 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSS--DMWSFGCVL 249 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTH--HHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCcc--chHHHHHHH
Confidence 789999999999865322 2345799999999999988888776 999999999
Q ss_pred HHcccCCCCC-CCCHHHHHH
Q 041034 648 LACLRSKPKS-RPTMQRISQ 666 (701)
Q Consensus 648 ~~cl~~~P~~-Rpt~~~i~~ 666 (701)
|+++.+.+.. ..+..+.++
T Consensus 250 ~ell~g~~pf~~~~~~~~~~ 269 (360)
T 3llt_A 250 AELYTGSLLFRTHEHMEHLA 269 (360)
T ss_dssp HHHHHSSCSCCCSSHHHHHH
T ss_pred HHHHHCCCCCCCCcHHHHHH
Confidence 9999987543 334333333
No 197
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-34 Score=294.06 Aligned_cols=212 Identities=25% Similarity=0.372 Sum_probs=177.2
Q ss_pred CCccceEEeeccceEEEEEEcC-C---CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE-E
Q 041034 451 DFHIRYCIGTGGYGSVYKAELP-D---GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM-F 525 (701)
Q Consensus 451 ~y~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~ 525 (701)
.|.+.+.||+|+||.||+|... + +..||+|++.... .....+.+.+|+.++++++||||+++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4667799999999999999642 2 2379999987543 334467889999999999999999999999876654 9
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+.+|+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EEECCCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEEecccCCCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 99999999999999976432 588999999999999999999999 9999999999999999999999999999865
Q ss_pred ccC----CCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 606 HVD----SSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 606 ~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
... ........+++.|+|||...+..++.+. ||||+|+++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKS--DVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEY 252 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHH--HHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTT
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhh--chhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCcc
Confidence 432 1222344688999999999888877765 99999999985
Q ss_pred -----------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 -----------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 -----------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
|+..+|.+|||+.++++.|++.
T Consensus 253 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 253 CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 7777888888888888877653
No 198
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.2e-34 Score=307.05 Aligned_cols=189 Identities=21% Similarity=0.377 Sum_probs=158.4
Q ss_pred cCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC--CCceeeeeeeeeeCcEEEEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR--HRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 527 (701)
.+|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++...+..|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 46999999999999999999887899999999976543 3445678999999999996 59999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|| +.+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+|+.+..
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 56789999998754 588999999999999999999999 999999999999995 58999999999987653
Q ss_pred CCC--CceeecccccccCCCCCCC-----------CcCChhhHHHHHHHHHHHHH
Q 041034 608 DSS--NRTLRAGTYGYIAPDQRLS-----------PPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 608 ~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~~Di~slg~i~~~ 649 (701)
... ......||+.|+|||++.+ ..++.+ .||||+|+++|+
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~--~DiwSlGvil~e 259 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPK--SDVWSLGCILYY 259 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHH--HHHHHHHHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCCh--hhHHHHHHHHHH
Confidence 322 1234579999999998765 234544 499999999985
No 199
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.2e-34 Score=303.72 Aligned_cols=277 Identities=24% Similarity=0.277 Sum_probs=205.3
Q ss_pred HHHHHHhc--------CCCCcCCCC---CCCCCCCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCC
Q 041034 3 IERQALLN--------CGWWKDRIP---HNTSDHCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWN 71 (701)
Q Consensus 3 ~~~~~l~~--------~~~~~~~~~---~~~~d~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~ 71 (701)
.||+||++ ...|...|. ....++|.|.|++|+... . .+ .....++++.|+|++
T Consensus 27 ~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~---------~----~l---~~~~~~~l~~L~L~~ 90 (328)
T 4fcg_A 27 PYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATA---------D----LL---EDATQPGRVALELRS 90 (328)
T ss_dssp CHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHH---------H----HH---HHHTSTTCCEEEEES
T ss_pred hHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhH---------H----HH---hcccccceeEEEccC
Confidence 57899987 112233342 235678888888885211 0 00 012346788888888
Q ss_pred CcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCc
Q 041034 72 NNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP 151 (701)
Q Consensus 72 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 151 (701)
|.++ .+|+.++++++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..+..+++|++|+|++|++.+.+|
T Consensus 91 n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p 167 (328)
T 4fcg_A 91 VPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELP 167 (328)
T ss_dssp SCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCC
T ss_pred CCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccC
Confidence 8887 67778888889999999999888 78888888888999999888888 667788888888888888888887777
Q ss_pred ccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCc
Q 041034 152 QEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTS 231 (701)
Q Consensus 152 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~ 231 (701)
..+... ..+..+.++++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..+..+++
T Consensus 168 ~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~ 230 (328)
T 4fcg_A 168 EPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPK 230 (328)
T ss_dssp SCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTT
T ss_pred hhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCC
Confidence 765431 11233556777777777777777 667777777777777777777774 4556777788
Q ss_pred ccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCC
Q 041034 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSK 311 (701)
Q Consensus 232 L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 311 (701)
|++|+|++|++.+.+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.+++..
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~ 310 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPP 310 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCG
T ss_pred CCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCH
Confidence 88888888888777777788888888888888888778887788888888888888888888888888888888888777
Q ss_pred CcCC
Q 041034 312 NKLS 315 (701)
Q Consensus 312 N~l~ 315 (701)
|.+.
T Consensus 311 ~~~~ 314 (328)
T 4fcg_A 311 HLQA 314 (328)
T ss_dssp GGSC
T ss_pred HHHH
Confidence 6654
No 200
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=7e-34 Score=302.74 Aligned_cols=204 Identities=25% Similarity=0.408 Sum_probs=172.9
Q ss_pred HHHhhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCcc-----ChHHHHHHHHHHHHHhcC-CCCceeeeee
Q 041034 444 DLINATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETE-----DSAFVESFQNEARVLSTV-RHRNIVKLYG 516 (701)
Q Consensus 444 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 516 (701)
......++|++.+.||+|+||.||+|... +|+.||||++...... .....+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33455678999999999999999999764 7999999998765421 123356788999999999 7999999999
Q ss_pred eeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEE
Q 041034 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFV 596 (701)
Q Consensus 517 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL 596 (701)
++......++||||+++++|.+++.... .+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+||
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEE
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999997643 589999999999999999999999 9999999999999999999999
Q ss_pred EeecCccccccCCCCceeecccccccCCCCCCC------CcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 597 ADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLS------PPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 597 ~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
+|||++..+... .......||+.|+|||++.+ ..++.+. ||||+|+++|+|+.+.+.
T Consensus 242 ~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--Di~slG~il~ell~g~~p 304 (365)
T 2y7j_A 242 SDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEV--DLWACGVILFTLLAGSPP 304 (365)
T ss_dssp CCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTH--HHHHHHHHHHHHHHSSCS
T ss_pred EecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchh--hHHhHHHHHHHHHHCCCC
Confidence 999999876533 23344679999999998753 2344454 999999999998887643
No 201
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8e-35 Score=306.38 Aligned_cols=200 Identities=24% Similarity=0.354 Sum_probs=167.7
Q ss_pred HHHhhhcCCccceEEeeccceEEEEEEcC-CC-----cEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeee
Q 041034 444 DLINATEDFHIRYCIGTGGYGSVYKAELP-DG-----KVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYG 516 (701)
Q Consensus 444 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 516 (701)
+++...++|++.+.||+|+||.||+|... .+ +.||+|.+..... ....+.+.+|+.+++.+ +||||+++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 117 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH--ADEKEALMSELKIMSHLGQHENIVNLLG 117 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC--hHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 44556789999999999999999999653 23 4799999976542 33457789999999999 8999999999
Q ss_pred eeeeCcEEEEEEEccCCCCHHHHHhcCCC-----------ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCc
Q 041034 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDE-----------AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNN 585 (701)
Q Consensus 517 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~N 585 (701)
++.+.+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ ||+||||||+|
T Consensus 118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 194 (333)
T 2i1m_A 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194 (333)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccce
Confidence 99999999999999999999999875321 22578999999999999999999999 99999999999
Q ss_pred EEEcCCCCeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHc
Q 041034 586 ILLNSNLEAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALAC 650 (701)
Q Consensus 586 Ill~~~~~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~c 650 (701)
|+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.+. ||||+|++++++
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~el 259 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS--DVWSYGILLWEI 259 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHH
T ss_pred EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHH--HHHHHHHHHHHH
Confidence 99999999999999999876543322 2234578899999998877777665 999999999963
No 202
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.5e-34 Score=299.77 Aligned_cols=201 Identities=21% Similarity=0.368 Sum_probs=156.6
Q ss_pred HHHHhhhcCCccceEEeeccceEEEEEEcC----CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeee
Q 041034 443 EDLINATEDFHIRYCIGTGGYGSVYKAELP----DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFC 518 (701)
Q Consensus 443 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 518 (701)
+++....++|.+.+.||+|+||.||+|... .++.||+|+++..... ....+.+.+|+.++++++||||+++++++
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 344555788999999999999999999543 3458999999765432 34457789999999999999999999999
Q ss_pred eeCc-----EEEEEEEccCCCCHHHHHhcC---CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC
Q 041034 519 LHKR-----CMFFIYEYMERGSLFYVLRDD---DEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS 590 (701)
Q Consensus 519 ~~~~-----~~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~ 590 (701)
.+.. ..++||||+++++|.+++... .....+++..+..++.|++.||.|||++ ||+||||||+||+++.
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRD 182 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECT
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcC
Confidence 8755 359999999999999998532 1223689999999999999999999999 9999999999999999
Q ss_pred CCCeEEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 591 NLEAFVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 591 ~~~~kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
++.+||+|||+++....... ......+++.|+|||.+.+..++.+. ||||+|+++++
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~e 241 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKS--DVWAFGVTMWE 241 (313)
T ss_dssp TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHH--HHHHHHHHHHH
T ss_pred CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchh--hhHHHHHHHHH
Confidence 99999999999987643321 22334578899999999887777765 99999999996
No 203
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=293.29 Aligned_cols=199 Identities=26% Similarity=0.369 Sum_probs=164.2
Q ss_pred cCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (701)
++|.....||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 98 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM 98 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence 4566667999999999999965 5688999999976532 23477899999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC-CCCeEEEeecCcccccc
Q 041034 529 EYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS-NLEAFVADFGTARLLHV 607 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~-~~~~kL~DFGla~~~~~ 607 (701)
||+++++|.+++........+++..+..++.|++.||+|||++ |++||||||+||+++. ++.+||+|||.++....
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999998765444678999999999999999999999 9999999999999987 89999999999987654
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
.........||+.|+|||.+.+.........||||+|+++++++.+.
T Consensus 176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~ 222 (295)
T 2clq_A 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTS
T ss_pred CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 33333455799999999998664422223359999999999866654
No 204
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7e-34 Score=296.53 Aligned_cols=191 Identities=30% Similarity=0.443 Sum_probs=161.9
Q ss_pred hhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
...++|++.+.||+|+||.||+|... +++.||+|++..... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 34678999999999999999999664 689999999976532 266889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++++|.+++..... .+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||.+...
T Consensus 101 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEEECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 99999999999999874322 589999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
...........||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~ 217 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVA--DIWSLGITAIE 217 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTH--HHHHHHHHHHH
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccc--cHHHHHHHHHH
Confidence 5544444556799999999999887777765 99999999985
No 205
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.1e-34 Score=300.74 Aligned_cols=204 Identities=22% Similarity=0.313 Sum_probs=169.4
Q ss_pred cHHHHHhhhcCCccceEEeeccceEEEEEEc------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceee
Q 041034 441 LYEDLINATEDFHIRYCIGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVK 513 (701)
Q Consensus 441 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 513 (701)
...++....++|++.+.||+|+||.||+|.. .+++.||||+++.... ....+.+.+|+.+++++ +||||++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC--cHHHHHHHHHHHHHHhcccCCCeee
Confidence 3445556678999999999999999999963 3568899999976543 33456789999999999 6999999
Q ss_pred eeeeeeeCc-EEEEEEEccCCCCHHHHHhcCCCc-------------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEec
Q 041034 514 LYGFCLHKR-CMFFIYEYMERGSLFYVLRDDDEA-------------IELNWTRRVNIVKSVAHALSYLHHDCTPSIVHR 579 (701)
Q Consensus 514 l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~ 579 (701)
+++++...+ ..++||||+++++|.+++...... ..+++..+..++.|++.||+|||++ ||+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999987754 589999999999999999865421 1278999999999999999999999 99999
Q ss_pred CCCCCcEEEcCCCCeEEEeecCccccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 580 DISSNNILLNSNLEAFVADFGTARLLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 580 Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
||||+||+++.++.+||+|||+++........ .....+|+.|+|||++.+..++.+. ||||+|+++++++
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~ 244 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS--DVWSFGVLLWEIF 244 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchh--HHHHHHHHHHHHH
Confidence 99999999999999999999999876443322 2234578899999998877777665 9999999999644
No 206
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-34 Score=294.42 Aligned_cols=195 Identities=25% Similarity=0.396 Sum_probs=164.0
Q ss_pred hhcCCccce-EEeeccceEEEEEEcC---CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 448 ATEDFHIRY-CIGTGGYGSVYKAELP---DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 448 ~~~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
..++|.+.+ .||+|+||.||+|... +++.||||+++... .....+.+.+|+.++++++||||+++++++ ..+.
T Consensus 7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~ 83 (287)
T 1u59_A 7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 83 (287)
T ss_dssp CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSS
T ss_pred cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCC
Confidence 356777777 9999999999999653 57789999998653 334467899999999999999999999999 4566
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 158 (287)
T 1u59_A 84 LMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK 158 (287)
T ss_dssp EEEEEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccccee
Confidence 8999999999999999975432 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCCC---ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 604 LLHVDSSN---RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 604 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
........ .....+|+.|+|||.+.+..++.+. ||||+|++++++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~ellt 208 (287)
T 1u59_A 159 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS--DVWSYGVTMWEALS 208 (287)
T ss_dssp ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHH--HHHHHHHHHHHHHT
T ss_pred eeccCcceeeccccccccccccCHHHhccCCCCchh--hHHHHHHHHHHHHc
Confidence 76533221 1223468899999998777776665 99999999997554
No 207
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=301.43 Aligned_cols=203 Identities=27% Similarity=0.429 Sum_probs=161.9
Q ss_pred ccHHHHHhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeee
Q 041034 440 ILYEDLINATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGF 517 (701)
Q Consensus 440 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 517 (701)
+.+.++....++|++.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|+.+++++ +||||++++++
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST----THHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc----HHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 34455566788999999999999999999965 57899999999765433 26788999999998 79999999999
Q ss_pred eee------CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC
Q 041034 518 CLH------KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN 591 (701)
Q Consensus 518 ~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~ 591 (701)
+.. .+..++||||+++++|.+++.... ...+++..+..++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~ 165 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTEN 165 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTT
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCC
Confidence 987 467899999999999999998653 23589999999999999999999999 99999999999999999
Q ss_pred CCeEEEeecCccccccCCCCceeecccccccCCCCCC-----CCcCChhhHHHHHHHHHHHHHccc
Q 041034 592 LEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRL-----SPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 592 ~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
+.+||+|||++..............||+.|+|||++. +..++.+. ||||+|+++++++.
T Consensus 166 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Di~slG~il~~l~~ 229 (326)
T 2x7f_A 166 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKS--DLWSLGITAIEMAE 229 (326)
T ss_dssp CCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTH--HHHHHHHHHHHHHH
T ss_pred CCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccc--hHHHHHHHHHHHHh
Confidence 9999999999987654433344557999999999986 34455554 99999999996443
No 208
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.9e-34 Score=296.04 Aligned_cols=196 Identities=23% Similarity=0.365 Sum_probs=161.1
Q ss_pred HHhhhcCCccce-EEeeccceEEEEEEc---CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 445 LINATEDFHIRY-CIGTGGYGSVYKAEL---PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 445 ~~~~~~~y~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
+....++|.+.+ .||+|+||.||+|.+ .+++.||||+++.... +....+++.+|+.+++.++||||+++++++ .
T Consensus 11 ~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 11 VYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 334467888888 999999999999943 2468899999986543 234467899999999999999999999998 5
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
.+..++||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 162 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 162 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCC
Confidence 667899999999999999998754 589999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCCC---ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHc
Q 041034 601 TARLLHVDSSN---RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALAC 650 (701)
Q Consensus 601 la~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~c 650 (701)
+++........ .....+++.|+|||.+.+..++.+. ||||+|++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l 213 (291)
T 1xbb_A 163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS--DVWSFGVLMWEA 213 (291)
T ss_dssp TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHH--HHHHHHHHHHHH
T ss_pred cceeeccCCCcccccccCCCCceeeChHHhccCCCChhh--hHHHHHHHHHHH
Confidence 99876543221 1223467889999998777766654 999999999963
No 209
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=301.71 Aligned_cols=216 Identities=24% Similarity=0.436 Sum_probs=174.6
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcE----EEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKV----VALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
.++|++.+.||+|+||.||+|.. .+++. ||+|.+....... ..+.+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCC--CHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHH--HHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 46899999999999999999965 34554 5777776543222 2477899999999999999999999998765
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++|+||+++|+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 7899999999999999987543 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCCC--ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 604 LLHVDSSN--RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 604 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
........ .....+|+.|+|||++.+..++.+. ||||+|+++|+
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 243 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS--DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 243 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHH--HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcc
Confidence 76433221 2234567889999999888777765 99999999985
Q ss_pred -----------cccCCCCCCCCHHHHHHHhhcCCCc
Q 041034 650 -----------CLRSKPKSRPTMQRISQELEGKTPM 674 (701)
Q Consensus 650 -----------cl~~~P~~Rpt~~~i~~~l~~~~~~ 674 (701)
||..+|.+||++.|+++.|++....
T Consensus 244 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 244 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 7778899999999999998876543
No 210
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-34 Score=307.68 Aligned_cols=213 Identities=25% Similarity=0.416 Sum_probs=167.9
Q ss_pred cCCccceEEeeccceEEEEEEcC--CC--cEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee-CcEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAELP--DG--KVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH-KRCM 524 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 524 (701)
..|++.+.||+|+||.||+|... ++ ..||+|.++... +....+++.+|+.++++++||||+++++++.. ++..
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 34778899999999999999653 22 468999987543 23446789999999999999999999998654 5678
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.++++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 999999999999999976543 578999999999999999999999 999999999999999999999999999986
Q ss_pred cccCCC----CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-------------------------------
Q 041034 605 LHVDSS----NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA------------------------------- 649 (701)
Q Consensus 605 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~------------------------------- 649 (701)
...... ......+|+.|+|||.+.+..++.+. ||||+|+++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~ 319 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKS--DVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 319 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCT
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHH--HHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 643221 12234577899999998887777765 99999999995
Q ss_pred ------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 ------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 ------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
||..+|.+||++.++++.|+..
T Consensus 320 ~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 320 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 6777888888888888887653
No 211
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-35 Score=306.49 Aligned_cols=189 Identities=27% Similarity=0.380 Sum_probs=144.2
Q ss_pred hcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhc--CCCCceeeeeeeeeeCc----
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST--VRHRNIVKLYGFCLHKR---- 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---- 522 (701)
.++|++.+.||+|+||.||+|... ++.||||++.... ...+.+|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc------hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 367999999999999999999774 8899999986542 2556778888877 78999999999998776
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeEecCCCCCcEEEcCCCCe
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH--------HDCTPSIVHRDISSNNILLNSNLEA 594 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~givH~Dlkp~NIll~~~~~~ 594 (701)
..++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999764 4778889999999999999999 77 99999999999999999999
Q ss_pred EEEeecCccccccCCCC----ceeecccccccCCCCCCCCcCC----hhhHHHHHHHHHHHHHcc
Q 041034 595 FVADFGTARLLHVDSSN----RTLRAGTYGYIAPDQRLSPPVN----QKIIQDIILVSTTALACL 651 (701)
Q Consensus 595 kL~DFGla~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~----~~~~~Di~slg~i~~~cl 651 (701)
||+|||+|+........ .....||+.|+|||++.+.... .....||||+|+++|+++
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~ 212 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTG
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHH
Confidence 99999999776543322 2234699999999998765332 113459999998876533
No 212
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.1e-34 Score=301.02 Aligned_cols=209 Identities=21% Similarity=0.308 Sum_probs=172.9
Q ss_pred CcccHHHHHhhhcCCccc-eEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeee
Q 041034 438 GKILYEDLINATEDFHIR-YCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKL 514 (701)
Q Consensus 438 ~~~~~~~~~~~~~~y~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l 514 (701)
+.+.|+......++|.+. +.||+|+||.||+|... +++.||+|++....... .....+.+|+.+++.+. ||||+++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEE
Confidence 345566677788889988 89999999999999654 69999999998654322 22467889999999995 6999999
Q ss_pred eeeeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC---C
Q 041034 515 YGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---N 591 (701)
Q Consensus 515 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---~ 591 (701)
++++.+.+..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+||+++. +
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~ 170 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPL 170 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTB
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCC
Confidence 9999999999999999999999999865422 2589999999999999999999999 9999999999999987 7
Q ss_pred CCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 592 LEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 592 ~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
+.+||+|||+++...... ......||+.|+|||++.+..++.+. ||||+|+++++|+.+.
T Consensus 171 ~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~~ll~g~ 230 (327)
T 3lm5_A 171 GDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTAT--DMWNIGIIAYMLLTHT 230 (327)
T ss_dssp CCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSS
T ss_pred CcEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchh--hHHHHHHHHHHHHhCC
Confidence 899999999998765332 23345799999999999888777765 9999999999866654
No 213
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-34 Score=297.40 Aligned_cols=202 Identities=29% Similarity=0.398 Sum_probs=165.4
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCcc--ChHHHHHHHHHHHHHhcC---CCCceeeeeeeeeeC
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETE--DSAFVESFQNEARVLSTV---RHRNIVKLYGFCLHK 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 521 (701)
..++|++.+.||+|+||+||+|.. .+++.||||++...... .......+.+|+.+++.+ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999975 46899999998743311 111124556777777766 499999999999875
Q ss_pred c-----EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEE
Q 041034 522 R-----CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFV 596 (701)
Q Consensus 522 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL 596 (701)
. ..++||||++ ++|.+++...... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT-CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 4 5899999997 5999999875432 489999999999999999999999 9999999999999999999999
Q ss_pred EeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 597 ADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 597 ~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
+|||+|+...... ......||+.|+|||++.+..++.+. ||||+|+++++++.+.|..
T Consensus 162 ~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~~l~~g~~pf 219 (308)
T 3g33_A 162 ADFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPV--DMWSVGCIFAEMFRRKPLF 219 (308)
T ss_dssp CSCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTH--HHHHHHHHHHHTTTSSCSC
T ss_pred eeCccccccCCCc-ccCCccccccccCchHHcCCCCCchH--HHHHHHHHHHHHHhCCCCC
Confidence 9999998764332 33445799999999999888887775 9999999999999887543
No 214
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-34 Score=302.82 Aligned_cols=202 Identities=25% Similarity=0.365 Sum_probs=162.3
Q ss_pred HhhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccC--hHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETED--SAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR 522 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 522 (701)
....++|++.+.||+|+||.||+|... +++.||||++....... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344678999999999999999999765 58999999997643221 122346789999999999999999999999999
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
..++||||+++ +|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred ceEEEEEcCCC-CHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 99999999986 89988876432 578889999999999999999999 9999999999999999999999999999
Q ss_pred cccccCCCCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccCCC
Q 041034 603 RLLHVDSSNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
+.............||+.|+|||++.+.. ++.+. ||||+|+++++++.+.|
T Consensus 160 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~ell~g~~ 211 (346)
T 1ua2_A 160 KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGV--DMWAVGCILAELLLRVP 211 (346)
T ss_dssp STTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHH--HHHHHHHHHHHHHHSSC
T ss_pred eeccCCcccCCcccccccccCchHhhCCCCCCchh--hhHhHHHHHHHHHHCCC
Confidence 88765544455567999999999986543 45554 99999999998776654
No 215
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.6e-34 Score=302.21 Aligned_cols=199 Identities=24% Similarity=0.387 Sum_probs=165.9
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 578999999999999999999664 589999999876543 344456788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999988876544 589999999999999999999999 999999999999999999999999999987755
Q ss_pred CCCCceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
.........||+.|+|||.+.+. .++.+ .||||+|+++++++.+.|.
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--~Di~slG~il~~l~~g~~p 224 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKA--VDVWAIGCLVTEMFMGEPL 224 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTH--HHHHHHHHHHHHHHHSSCS
T ss_pred CccccCCCcCCccccCcccccCCCCcchH--HHHHHHHHHHHHHHhCCCC
Confidence 44445556799999999998765 44554 4999999999999888754
No 216
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.5e-34 Score=318.50 Aligned_cols=197 Identities=24% Similarity=0.410 Sum_probs=168.9
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||||++...........+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3567999999999999999999664 799999999976544333335788999999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE---cCCCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL---NSNLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll---~~~~~~kL~DFGla~ 603 (701)
||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||++ +.++.+||+|||+|+
T Consensus 104 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999987654 589999999999999999999999 99999999999999 467899999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
.+... .......||+.|+|||++.+ .++.+. ||||+|+++|+++.+.
T Consensus 178 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~--DiwslG~il~~ll~g~ 224 (484)
T 3nyv_A 178 HFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKC--DVWSTGVILYILLSGC 224 (484)
T ss_dssp HBCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHH--HHHHHHHHHHHHHHSS
T ss_pred Ecccc-cccccCCCCccccCceeecC-CCCCcc--eeHHHHHHHHHHHHCC
Confidence 76533 23344579999999999866 455554 9999999999755544
No 217
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1e-33 Score=293.89 Aligned_cols=189 Identities=25% Similarity=0.441 Sum_probs=162.8
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|.+.+.||+|+||.||+|... +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccc---hHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 3568999999999999999999654 79999999998654322 3568899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE---cCCCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL---NSNLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll---~~~~~~kL~DFGla~ 603 (701)
||||+++++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+++
T Consensus 84 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 999999999999987644 589999999999999999999999 99999999999999 778999999999997
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
..... ......||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~ 199 (304)
T 2jam_A 158 MEQNG--IMSTACGTPGYVAPEVLAQKPYSKAV--DCWSIGVITYI 199 (304)
T ss_dssp CCCCB--TTHHHHSCCCBCCTTTBSSCSCCHHH--HHHHHHHHHHH
T ss_pred ecCCC--ccccccCCCCccChHHhccCCCCchh--hHHHHHHHHHH
Confidence 65322 23345699999999999888777665 99999999985
No 218
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5e-35 Score=313.29 Aligned_cols=196 Identities=15% Similarity=0.168 Sum_probs=157.6
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHH---HHHhcCCCCceeeee-------e
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEA---RVLSTVRHRNIVKLY-------G 516 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~ 516 (701)
..++|++.+.||+|+||.||+|.. .+|+.||||++...........+.+.+|+ +++++++||||++++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 357899999999999999999976 46999999999865444444567889999 555566899999998 5
Q ss_pred eeeeCc-----------------EEEEEEEccCCCCHHHHHhcCCC----ccCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 041034 517 FCLHKR-----------------CMFFIYEYMERGSLFYVLRDDDE----AIELNWTRRVNIVKSVAHALSYLHHDCTPS 575 (701)
Q Consensus 517 ~~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g 575 (701)
++.+++ ..|+||||+ +|+|.+++..... ...+++..+..++.||+.||+|||++ |
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 555443 278999999 5799999976421 11244688889999999999999999 9
Q ss_pred eEecCCCCCcEEEcCCCCeEEEeecCccccccCCCCceeecccccccCCCCCCCC-----------cCChhhHHHHHHHH
Q 041034 576 IVHRDISSNNILLNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSP-----------PVNQKIIQDIILVS 644 (701)
Q Consensus 576 ivH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~~~Di~slg 644 (701)
|+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.+. ||||+|
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~--DvwSlG 300 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF--DAWALG 300 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH--HHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhh--hHHHHH
Confidence 9999999999999999999999999998642 23344567 999999998776 666665 999999
Q ss_pred HHHHHcccC
Q 041034 645 TTALACLRS 653 (701)
Q Consensus 645 ~i~~~cl~~ 653 (701)
+++|+++.+
T Consensus 301 ~il~elltg 309 (377)
T 3byv_A 301 LVIYWIWCA 309 (377)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHC
Confidence 999974443
No 219
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-33 Score=314.69 Aligned_cols=192 Identities=29% Similarity=0.462 Sum_probs=161.1
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccCh----------HHHHHHHHHHHHHhcCCCCceeeeee
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDS----------AFVESFQNEARVLSTVRHRNIVKLYG 516 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~ 516 (701)
..++|++.+.||+|+||.||+|... +++.||+|++........ ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999654 688999999986543211 23467899999999999999999999
Q ss_pred eeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC---C
Q 041034 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL---E 593 (701)
Q Consensus 517 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~---~ 593 (701)
++.+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999987654 589999999999999999999999 999999999999998775 6
Q ss_pred eEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 594 AFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 594 ~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
+||+|||+|+..... .......||+.|+|||++.+ .++.+. ||||+|+++|+
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~--DiwslG~il~~ 239 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKC--DVWSCGVIMYI 239 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHH--HHHHHHHHHHH
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchH--HHHHHHHHHHH
Confidence 999999999877543 23344579999999999864 455554 99999999996
No 220
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.7e-34 Score=314.95 Aligned_cols=191 Identities=24% Similarity=0.414 Sum_probs=161.9
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||+||+|... +++.||||++....... .....+.+|+.++++++||||+++++++.+....++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 3578999999999999999999654 78999999986533221 124678899999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc---CCCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN---SNLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~---~~~~~kL~DFGla~ 603 (701)
||||+++|+|.+.+.... .+++..+..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||+|+
T Consensus 99 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999999887654 589999999999999999999999 999999999999995 45689999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
..... .......||+.|+|||++.+. ++.+. ||||+|+++|+
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~--DiwslG~il~~ 214 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRGT-YDEKC--DVWSAGVILYI 214 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGSC-CCHHH--HHHHHHHHHHH
T ss_pred ECCCC-CccCCCcCCCCCCCHHHhCCC-CCchh--hHHHHHHHHHH
Confidence 76533 233445799999999998764 65554 99999999985
No 221
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.9e-33 Score=289.82 Aligned_cols=194 Identities=24% Similarity=0.358 Sum_probs=164.8
Q ss_pred cCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee----CcEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH----KRCM 524 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 524 (701)
..|++.+.||+|+||.||+|.. .++..||+|++...... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 3478889999999999999955 46889999998765433 3446788999999999999999999998875 4568
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCcEEEc-CCCCeEEEeecC
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS--IVHRDISSNNILLN-SNLEAFVADFGT 601 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g--ivH~Dlkp~NIll~-~~~~~kL~DFGl 601 (701)
++||||+++++|.+++.... .+++..+..++.|++.||+|||++ + |+||||||+||+++ .++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999997643 588999999999999999999998 7 99999999999997 789999999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
+..... .......||+.|+|||.+.+. ++.+ .||||+|+++++++.+.+
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~-~~~~--~Di~slG~~l~~l~~g~~ 227 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYEEK-YDES--VDVYAFGMCMLEMATSEY 227 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGGTC-CCTH--HHHHHHHHHHHHHHHSSC
T ss_pred cccccc--cccccccCCcCcCCHHHHhcc-CCCc--chHHHHHHHHHHHHhCCC
Confidence 976532 234455799999999988643 5554 499999999999888763
No 222
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=309.27 Aligned_cols=196 Identities=24% Similarity=0.348 Sum_probs=163.7
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc--EEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR--CMF 525 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 525 (701)
.++|++.+.||+|+||.||+|... +++.||||++........ .+.+.+|++++++++||||+++++++.+.. ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRP--VDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSC--HHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccch--HHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 467999999999999999999664 589999999976443322 467789999999999999999999998755 789
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE----cCCCCeEEEeecC
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL----NSNLEAFVADFGT 601 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll----~~~~~~kL~DFGl 601 (701)
+||||+++|+|.+++........+++..+..++.|++.||+|||++ ||+||||||+||++ +.++.+||+|||+
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998755444589999999999999999999999 99999999999999 7778899999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCC--------CcCChhhHHHHHHHHHHHHHccc
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLS--------PPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
|+...... ......||+.|+|||++.+ ..++. ..||||+|+++|+|+.
T Consensus 163 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--~~DiwSlG~il~el~t 218 (396)
T 4eut_A 163 ARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGA--TVDLWSIGVTFYHAAT 218 (396)
T ss_dssp CEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred ceEccCCC-ccccccCCccccCHHHhhccccccccccCCCc--HHHHHHHHHHHHHHHH
Confidence 98765432 2234569999999998754 22333 4599999999986444
No 223
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=301.07 Aligned_cols=235 Identities=22% Similarity=0.322 Sum_probs=174.9
Q ss_pred HhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeee----
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCL---- 519 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~---- 519 (701)
.....+|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~ 100 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 100 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence 33456899999999999999999965 478999999986543 334577899999999996 999999999983
Q ss_pred ----eCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCcEEEcCCCC
Q 041034 520 ----HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPS--IVHRDISSNNILLNSNLE 593 (701)
Q Consensus 520 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g--ivH~Dlkp~NIll~~~~~ 593 (701)
.....++||||+. |+|.+++........+++..+..++.||+.||+|||++ + |+||||||+||+++.++.
T Consensus 101 ~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~ 176 (337)
T 3ll6_A 101 ESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGT 176 (337)
T ss_dssp TSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSC
T ss_pred ccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCC
Confidence 4456899999996 69999887533333699999999999999999999998 7 999999999999999999
Q ss_pred eEEEeecCccccccCCCC------------ceeecccccccCCCCC---CCCcCChhhHHHHHHHHHHHHH---------
Q 041034 594 AFVADFGTARLLHVDSSN------------RTLRAGTYGYIAPDQR---LSPPVNQKIIQDIILVSTTALA--------- 649 (701)
Q Consensus 594 ~kL~DFGla~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~~~~Di~slg~i~~~--------- 649 (701)
+||+|||+++........ .....||+.|+|||++ .+..++.+. ||||+|+++++
T Consensus 177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~--Dv~slG~il~el~~g~~p~~ 254 (337)
T 3ll6_A 177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ--DIWALGCILYLLCFRQHPFE 254 (337)
T ss_dssp EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHH--HHHHHHHHHHHHHHSSCCC-
T ss_pred EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHH--hHHHHHHHHHHHHhCCCCCc
Confidence 999999999876532211 1134589999999998 444555554 99999999984
Q ss_pred ------------------------------cccCCCCCCCCHHHHHHHhhcCCCccchhhhhhHHHHhcc
Q 041034 650 ------------------------------CLRSKPKSRPTMQRISQELEGKTPMKKGLKEISISEMRNQ 689 (701)
Q Consensus 650 ------------------------------cl~~~P~~Rpt~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 689 (701)
||..+|.+||++.|+++.|+............++.++.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~~~~~~~~~~~ 324 (337)
T 3ll6_A 255 DGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQ 324 (337)
T ss_dssp -----------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCTTSCCHHHHTC
T ss_pred chhHHHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCCCccHHHHHHH
Confidence 8899999999999999998876543333333334444433
No 224
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.5e-34 Score=302.92 Aligned_cols=215 Identities=18% Similarity=0.249 Sum_probs=174.8
Q ss_pred hcCCccceEEeeccceEEEEEEcC----CCcEEEEEEecCCCccChH--------HHHHHHHHHHHHhcCCCCceeeeee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP----DGKVVALKKLHQSETEDSA--------FVESFQNEARVLSTVRHRNIVKLYG 516 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~ 516 (701)
.++|++.+.||+|+||.||+|... ++..||+|++......... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999664 5788999998865422110 1123667889999999999999999
Q ss_pred eeee----CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC
Q 041034 517 FCLH----KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL 592 (701)
Q Consensus 517 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~ 592 (701)
++.. ....++||||+ +++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9987 77899999999 999999997654 689999999999999999999999 999999999999998877
Q ss_pred --CeEEEeecCccccccCCCC-------ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------
Q 041034 593 --EAFVADFGTARLLHVDSSN-------RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------- 649 (701)
Q Consensus 593 --~~kL~DFGla~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------- 649 (701)
.+||+|||+|+.+...... .....||+.|+|||++.+..++.+. ||||+|+++|+
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRS--DVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHH--HHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchh--hHHHHHHHHHHHHhCCCCccccccc
Confidence 9999999999876432211 1345799999999999888777765 99999999984
Q ss_pred --------------------------------------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 --------------------------------------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 --------------------------------------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+||+++++++.|+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 267 PVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred cHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 78889999999999999988755
No 225
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-33 Score=291.56 Aligned_cols=211 Identities=16% Similarity=0.293 Sum_probs=174.7
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeee-eeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFC-LHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++...... +.+.+|+.+++.++|++++..++++ .+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 457899999999999999999965 57899999987654432 3578899999999988777666555 6678889
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE---cCCCCeEEEeecCc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL---NSNLEAFVADFGTA 602 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll---~~~~~~kL~DFGla 602 (701)
+||||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+|
T Consensus 82 lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 8899999975433 589999999999999999999999 99999999999999 78899999999999
Q ss_pred cccccCCC-------CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------
Q 041034 603 RLLHVDSS-------NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------- 649 (701)
Q Consensus 603 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------- 649 (701)
+....... ......||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRD--DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchh--HHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 87654322 12345799999999999888877665 99999999984
Q ss_pred -----------------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 -----------------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 -----------------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
|+..+|.+|||++++++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred cccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 7888999999999999988753
No 226
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.7e-34 Score=294.68 Aligned_cols=194 Identities=25% Similarity=0.330 Sum_probs=160.2
Q ss_pred hhcCCccceEEeeccceEEEEEEcCC----CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPD----GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC 523 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 523 (701)
..++|++.+.||+|+||.||+|.... +..||+|.+..... ....+.+.+|+.+++.++||||+++++++.++ .
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~ 86 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT--LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-P 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC--HHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-S
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC--chHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-C
Confidence 46789999999999999999996432 34699999986532 33457899999999999999999999998754 4
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
.++||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.++
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 6899999999999999976432 489999999999999999999999 99999999999999999999999999998
Q ss_pred ccccCCC-CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 604 LLHVDSS-NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 604 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
....... ......+++.|+|||.+.+..++.+. ||||+|+++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~ll 208 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTAS--DVWMFAVCMWEIL 208 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchh--ccHHHHHHHHHHH
Confidence 7653322 22334578899999998777777665 9999999998643
No 227
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.6e-33 Score=291.93 Aligned_cols=193 Identities=26% Similarity=0.458 Sum_probs=158.3
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee-------
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH------- 520 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 520 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 56799999999999999999965 47999999999642 2345778999999999999999999998765
Q ss_pred ------CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCe
Q 041034 521 ------KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEA 594 (701)
Q Consensus 521 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~ 594 (701)
....++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENL--NQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSCG--GGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhcccc--ccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCE
Confidence 4578999999999999999986432 578899999999999999999999 99999999999999999999
Q ss_pred EEEeecCccccccC--------------CCCceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHccc
Q 041034 595 FVADFGTARLLHVD--------------SSNRTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 595 kL~DFGla~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~ 652 (701)
||+|||.++..... ........||+.|+|||.+.+. .++.+ .||||+|+++++++.
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEK--IDMYSLGIIFFEMIY 226 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTH--HHHHHHHHHHHHHHS
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcch--hhHHHHHHHHHHHHh
Confidence 99999999876422 1122345689999999998754 45554 499999999998664
No 228
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-33 Score=289.60 Aligned_cols=210 Identities=16% Similarity=0.298 Sum_probs=178.1
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeee-eeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFC-LHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++...... +.+.+|+.+++.++|++++..+.++ .+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 357899999999999999999965 57999999998765433 4578899999999988766655554 5677889
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE---cCCCCeEEEeecCc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL---NSNLEAFVADFGTA 602 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll---~~~~~~kL~DFGla 602 (701)
+||||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 8899999975432 589999999999999999999999 99999999999999 48899999999999
Q ss_pred cccccCCC-------CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------
Q 041034 603 RLLHVDSS-------NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------- 649 (701)
Q Consensus 603 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------- 649 (701)
+....... ......||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRD--DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcch--hhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccc
Confidence 87654332 12345799999999999888877665 99999999984
Q ss_pred -----------------------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -----------------------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -----------------------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
||..+|.+||+++++++.|+.
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred ccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 888899999999999988875
No 229
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=8.2e-34 Score=297.86 Aligned_cols=195 Identities=27% Similarity=0.436 Sum_probs=160.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcE--EEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKV--VALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 524 (701)
.++|++.+.||+|+||.||+|... +++. ||+|.++.... ....+.+.+|+.+++++ +||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc--hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 478999999999999999999654 5664 49998875432 22346789999999999 899999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCC-------------CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC
Q 041034 525 FFIYEYMERGSLFYVLRDDD-------------EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN 591 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~ 591 (701)
++||||+++++|.+++.... ....+++..+..++.|++.||+|||++ ||+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997653 123689999999999999999999999 99999999999999999
Q ss_pred CCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 592 LEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 592 ~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
+.+||+|||+++..... .......+++.|+|||++.+..++.+. ||||+|+++++++
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~ell 235 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNS--DVWSYGVLLWEIV 235 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHH--HHHHHHHHHHHHH
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchh--cchHHHHHHHHHH
Confidence 99999999999754322 122334578899999998777766665 9999999999643
No 230
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.5e-34 Score=323.23 Aligned_cols=217 Identities=28% Similarity=0.461 Sum_probs=180.7
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
++...++|++.+.||+|+||.||+|.+.+++.||||+++..... .+.+.+|++++++++||||+++++++.+ +..
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 44556789999999999999999998887888999999865432 3678999999999999999999999876 668
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred eEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 99999999999999997532 12488999999999999999999999 999999999999999999999999999987
Q ss_pred cccCC-CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH----------------------------------
Q 041034 605 LHVDS-SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA---------------------------------- 649 (701)
Q Consensus 605 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~---------------------------------- 649 (701)
..... .......++..|+|||++....++.+. ||||+|+++|+
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~s--DvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~ 490 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS--DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 490 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchh--hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 64221 111223467889999998877777665 99999999996
Q ss_pred ---------cccCCCCCCCCHHHHHHHhhcCC
Q 041034 650 ---------CLRSKPKSRPTMQRISQELEGKT 672 (701)
Q Consensus 650 ---------cl~~~P~~Rpt~~~i~~~l~~~~ 672 (701)
||..+|.+|||++++++.|+...
T Consensus 491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 491 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 66667777777777777766554
No 231
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-33 Score=323.69 Aligned_cols=214 Identities=22% Similarity=0.325 Sum_probs=181.1
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|... +++.||||++++.........+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999654 6889999999764322222246678899999988 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++|+|.++++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+..
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999998654 589999999999999999999999 9999999999999999999999999999875
Q ss_pred ccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHHHhh
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQELE 669 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~~l~ 669 (701)
..........+||+.|+|||++.+..++.+. ||||+|+++|+|+.+.|. ...+..++.+.+.
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~--DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 555 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSV--DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccc--eEechHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 5444555567899999999999888887776 999999999999998754 3344444444443
No 232
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=300.50 Aligned_cols=193 Identities=25% Similarity=0.398 Sum_probs=151.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHH--HHHHHhcCCCCceeeeeeeee-----e
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQN--EARVLSTVRHRNIVKLYGFCL-----H 520 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--E~~~l~~l~h~niv~l~~~~~-----~ 520 (701)
..++|++.+.||+|+||.||+|+. +++.||||++..... ..+.. |+..+..++||||+++++++. .
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~------~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR------QNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH------HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch------hhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 357899999999999999999976 689999999975431 33333 444455689999999997543 2
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCC------CCCeEecCCCCCcEEEcCCCCe
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC------TPSIVHRDISSNNILLNSNLEA 594 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~givH~Dlkp~NIll~~~~~~ 594 (701)
....++||||+++|+|.+++.... .++..+..++.|++.||+|||+++ .++|+||||||+||+++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 346799999999999999997653 588999999999999999999762 2289999999999999999999
Q ss_pred EEEeecCccccccCCC--------CceeecccccccCCCCCCCCcCC-----hhhHHHHHHHHHHHHHcc
Q 041034 595 FVADFGTARLLHVDSS--------NRTLRAGTYGYIAPDQRLSPPVN-----QKIIQDIILVSTTALACL 651 (701)
Q Consensus 595 kL~DFGla~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~-----~~~~~Di~slg~i~~~cl 651 (701)
||+|||+|+.+..... ......||+.|+|||++.+.... .....||||+|+++|+++
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell 229 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHH
Confidence 9999999987643211 12234699999999998763221 122459999999987543
No 233
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-33 Score=313.44 Aligned_cols=190 Identities=28% Similarity=0.420 Sum_probs=157.9
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||+|++........ ....+.+|+.+++.++||||+++++++.+....|+|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C-TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 567999999999999999999664 689999999986543221 136788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC---CCCeEEEeecCccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---NLEAFVADFGTARL 604 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---~~~~kL~DFGla~~ 604 (701)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++. ++.+||+|||+|+.
T Consensus 115 ~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999887654 589999999999999999999999 9999999999999976 45599999999987
Q ss_pred cccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 605 LHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 605 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
..... ......||+.|+|||++.+ .++.+. ||||+|+++|+
T Consensus 189 ~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~--DiwslG~il~~ 229 (494)
T 3lij_A 189 FENQK-KMKERLGTAYYIAPEVLRK-KYDEKC--DVWSIGVILFI 229 (494)
T ss_dssp CBTTB-CBCCCCSCTTTCCHHHHTT-CBCTHH--HHHHHHHHHHH
T ss_pred CCCCc-cccccCCCcCeeCHHHHcc-cCCCch--hHHHHHHHHHH
Confidence 75432 3344579999999998764 455554 99999999985
No 234
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.8e-34 Score=296.03 Aligned_cols=196 Identities=27% Similarity=0.423 Sum_probs=160.0
Q ss_pred hhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
...++|++.+.||+|+||.||+|... +++.||+|++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CC---HHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH---HHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence 34678999999999999999999665 58999999987653322 467889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+||||+++++|.+++..... .+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEECCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEEEeCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 99999999999999875332 589999999999999999999999 9999999999999999999999999998654
Q ss_pred ccCCCCceeecccccccCCCCCC-----CCcCChhhHHHHHHHHHHHHHccc
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRL-----SPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
...........||+.|+|||.+. ...++.+ .||||+|+++++++.
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~--~Di~slG~il~~l~~ 217 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYK--ADIWSLGITLIEMAQ 217 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTH--HHHHHHHHHHHHHHH
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchh--hhHHHHHHHHHHHhc
Confidence 32222233456999999999873 4445554 499999999996443
No 235
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.4e-34 Score=293.48 Aligned_cols=190 Identities=25% Similarity=0.407 Sum_probs=155.6
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC-cEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK-RCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .++.||||+++... ..+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 457899999999999999999977 48899999997543 246789999999999999999999987554 47899
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLH 606 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~ 606 (701)
||||+++++|.+++..... ..+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||+++...
T Consensus 93 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 9999999999999976432 2378999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 607 VDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 607 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
.. .....+++.|+|||.+.+..++.+. ||||+|++++++++
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~t 209 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKS--DVWSFGILLWEIYS 209 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHH--HHHHHHHHHHHHHT
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchh--cHHHHHHHHHHHHh
Confidence 32 2234578899999998877777665 99999999997543
No 236
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.1e-34 Score=295.75 Aligned_cols=196 Identities=25% Similarity=0.429 Sum_probs=153.9
Q ss_pred hcCCccceEEeeccceEEEEEEc--CCCc--EEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL--PDGK--VVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~--~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
.++|++.+.||+|+||.||+|.+ .+++ .||||+++..........+.+.+|+.++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 46899999999999999999964 2333 68999998765444455688999999999999999999999998765 8
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhccC--CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 899999999999999976432 589999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCC---ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHccc
Q 041034 605 LHVDSSN---RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 605 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
....... .....+|+.|+|||.+.+..++.+. ||||+|+++++++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~ 219 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS--DTWMFGVTLWEMFT 219 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHH--HHHHHHHHHHHHHT
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchh--hHHHHHHHHHHHHh
Confidence 6543321 2234578889999998777766654 99999999996443
No 237
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.2e-33 Score=300.83 Aligned_cols=195 Identities=26% Similarity=0.338 Sum_probs=169.3
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 468999999999999999999654 68999999998653 344467889999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.... .+++..+..++.|++.||+|||+++ ||+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999997654 5899999999999999999999732 899999999999999999999999999976542
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
. ......||+.|+|||++.+..++.+. ||||+|+++++++.+.
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~ 227 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQS--DIWSMGLSLVEMAVGR 227 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHH--HHHHHHHHHHHHHHTS
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchh--hHHHHHHHHHHHHhCC
Confidence 2 22345799999999999888777765 9999999999888765
No 238
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.7e-33 Score=298.29 Aligned_cols=206 Identities=24% Similarity=0.362 Sum_probs=165.1
Q ss_pred cHHHHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCc--------cChHHHHHHHHHHHHHhcCCCCcee
Q 041034 441 LYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSET--------EDSAFVESFQNEARVLSTVRHRNIV 512 (701)
Q Consensus 441 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~E~~~l~~l~h~niv 512 (701)
.++++....++|++.+.||+|+||.||+|...+++.||||++..... .+....+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 46678888999999999999999999999888899999999865432 2234457899999999999999999
Q ss_pred eeeeeeee-----CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEE
Q 041034 513 KLYGFCLH-----KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNIL 587 (701)
Q Consensus 513 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIl 587 (701)
++++++.. ....++||||++ |+|.+++..... .+++..+..++.||+.||+|||++ ||+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999854 346899999998 588888875432 589999999999999999999999 9999999999999
Q ss_pred EcCCCCeEEEeecCccccccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 588 LNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 588 l~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.+. ||||+|+++++++.+.+
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~~l~~g~~ 232 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLV--DMWSAGCVMAEMFNRKA 232 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHH--HHHHHHHHHHHHHHSSC
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHh--HHHhHHHHHHHHHhCCC
Confidence 999999999999999865432 22344578999999998876 4455554 99999999998777653
No 239
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=296.14 Aligned_cols=195 Identities=24% Similarity=0.428 Sum_probs=163.8
Q ss_pred hcCCccceEEeeccceEEEEEEc-----CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc-
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-----PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR- 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~- 522 (701)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 46789999999999999999973 368899999997643 234578899999999999999999999987654
Q ss_pred -EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 523 -CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 523 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
..++||||+++++|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 68999999999999999987542 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCC---ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccC
Q 041034 602 ARLLHVDSSN---RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 602 a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~ 653 (701)
++........ .....++..|+|||.+.+..++.+. ||||+|+++++++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~el~tg 244 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVAS--DVWSFGVVLYELFTY 244 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHH--HHHHHHHHHHHHHHT
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchh--hHHHHHHHHHHHHhc
Confidence 9877543321 1223567789999998877766654 999999998865543
No 240
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-33 Score=299.14 Aligned_cols=193 Identities=26% Similarity=0.373 Sum_probs=159.4
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc-----
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR----- 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 522 (701)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+++.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 57899999999999999999965 579999999997643 23445678899999999999999999999987653
Q ss_pred -EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 523 -CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 523 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
..|+||||+ +++|.++++.. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 77999999763 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
|+..... .....+|+.|+|||++.+ ..++.+. ||||+|+++++++.+.|
T Consensus 175 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~ell~g~~ 224 (367)
T 1cm8_A 175 ARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTV--DIWSVGCIMAEMITGKT 224 (367)
T ss_dssp CEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTH--HHHHHHHHHHHHHHSSC
T ss_pred ccccccc---cCcCcCCCCcCCHHHHhCCCCCChhh--hHHHHHHHHHHHHhCCC
Confidence 9876432 334578999999998876 4566655 99999999998766543
No 241
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=290.90 Aligned_cols=213 Identities=22% Similarity=0.303 Sum_probs=172.3
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCcc-ChHHHHHHHHHHHHHhcCCCCceeeeeeeee--eCcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETE-DSAFVESFQNEARVLSTVRHRNIVKLYGFCL--HKRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 524 (701)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999764 6889999999764321 1223577899999999999999999999984 45678
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||++++ +.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999886 7777765432 2689999999999999999999999 999999999999999999999999999987
Q ss_pred cccCC--CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH---------------------------------
Q 041034 605 LHVDS--SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA--------------------------------- 649 (701)
Q Consensus 605 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~--------------------------------- 649 (701)
..... .......||+.|+|||+..+.........||||+|+++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGP 238 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCH
Confidence 64322 1223456899999999987654433334599999999985
Q ss_pred --------cccCCCCCCCCHHHHHH
Q 041034 650 --------CLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 650 --------cl~~~P~~Rpt~~~i~~ 666 (701)
|+..+|.+|||++|+++
T Consensus 239 ~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 239 PLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 77777888888888775
No 242
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-33 Score=301.44 Aligned_cols=199 Identities=28% Similarity=0.408 Sum_probs=158.1
Q ss_pred hhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeeeCc--
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLHKR-- 522 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-- 522 (701)
...++|++.+.||+|+||.||+|.. .+++.||||++..... .....+++.+|+.+++.+. ||||+++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--C-CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 3467899999999999999999954 5799999999875432 3344577889999999997 999999999997544
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
..|+||||+++ +|.+++... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+|
T Consensus 85 ~~~lv~e~~~~-~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYMET-DLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCSE-EHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccCc-CHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 78999999974 999998764 488999999999999999999999 9999999999999999999999999999
Q ss_pred cccccC---------------------CCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 603 RLLHVD---------------------SSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 603 ~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
+.+... ....+..+||+.|+|||++.+ ..++.+. ||||+|+++++|+.+.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~--DiwSlG~il~ell~g~~p 230 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGI--DMWSLGCILGEILCGKPI 230 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChh--hHHHHHHHHHHHHhCCCC
Confidence 865321 112234579999999999876 4555554 999999999999988754
No 243
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=319.47 Aligned_cols=212 Identities=25% Similarity=0.392 Sum_probs=171.4
Q ss_pred hcCCccce-EEeeccceEEEEEEcC---CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE
Q 041034 449 TEDFHIRY-CIGTGGYGSVYKAELP---DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 449 ~~~y~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 524 (701)
.+++.+.+ .||+|+||.||+|.+. ++..||||+++..... ...+.+.+|++++++++||||+++++++.. +..
T Consensus 334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~ 410 (613)
T 2ozo_A 334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EAL 410 (613)
T ss_dssp TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSE
T ss_pred ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCe
Confidence 34455555 7999999999999553 4667999999865332 235789999999999999999999999976 568
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 411 ~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~ 485 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKA 485 (613)
T ss_dssp EEEEECCTTCBHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred EEEEEeCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccc
Confidence 999999999999999975432 589999999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCC---ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------
Q 041034 605 LHVDSSN---RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------- 649 (701)
Q Consensus 605 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------- 649 (701)
....... .....+++.|+|||++.+..++.++ ||||+|+++|+
T Consensus 486 ~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~s--DvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~ 563 (613)
T 2ozo_A 486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS--DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 563 (613)
T ss_dssp CC--------------CCTTSCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTT
T ss_pred ccCCCceeeeccCCCCccceeCHhhhcCCCCCcHH--HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence 6433221 1223456899999999877777765 99999999986
Q ss_pred -----------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -----------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -----------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
||..+|.+||++.++++.|+.
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 667777777777777777654
No 244
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7e-34 Score=298.37 Aligned_cols=217 Identities=25% Similarity=0.383 Sum_probs=177.0
Q ss_pred hhcCCccceEEeeccceEEEEEEc------CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL------PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .....++.+|+.++++++||||+++++++.+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS--EQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc--hhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 457899999999999999999974 2477899999975432 33456789999999999999999999999999
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCC----ccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC---CCCe
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDE----AIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---NLEA 594 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---~~~~ 594 (701)
...++||||+++++|.+++..... ...+++..+..++.|++.||+|||++ ||+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999986532 13588999999999999999999999 9999999999999984 4469
Q ss_pred EEEeecCccccccCCC--CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-----------------------
Q 041034 595 FVADFGTARLLHVDSS--NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA----------------------- 649 (701)
Q Consensus 595 kL~DFGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~----------------------- 649 (701)
||+|||+++....... ......+|+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 260 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT--DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchh--hHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc
Confidence 9999999976543221 22334678999999998777777665 99999999995
Q ss_pred --------------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 --------------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 --------------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
||..+|.+||++.++++.++..
T Consensus 261 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 261 GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 6667788888888888877654
No 245
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-34 Score=304.51 Aligned_cols=201 Identities=26% Similarity=0.348 Sum_probs=166.5
Q ss_pred hcCCccceEEeeccceEEEEEEc----CCCcEEEEEEecCCCcc-ChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCc
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL----PDGKVVALKKLHQSETE-DSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKR 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 522 (701)
.++|++.+.||+|+||.||+|+. .+++.||||+++..... .....+.+.+|+.+++.+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999966 36899999998754311 111234567899999999 6999999999999999
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 9999999999999999997654 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccccCC-CCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 603 RLLHVDS-SNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 603 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
+.+.... .......||+.|+|||++.+.........||||+|+++|+|+.+.+
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~ 260 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence 8664322 2233457999999999987644333334599999999999887764
No 246
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=301.27 Aligned_cols=207 Identities=17% Similarity=0.260 Sum_probs=173.8
Q ss_pred hcCCccceEEeeccceEEEEEEcC---------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceee------
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP---------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVK------ 513 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------ 513 (701)
.++|++.+.||+|+||.||+|... +++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 468999999999999999999665 3789999998754 35678999999999999988
Q ss_pred ---------eeeeeee-CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCC
Q 041034 514 ---------LYGFCLH-KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISS 583 (701)
Q Consensus 514 ---------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp 583 (701)
+++++.. ....++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ ||+||||||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp 187 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTA 187 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCG
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCH
Confidence 5666665 67899999999 999999998652 23699999999999999999999999 999999999
Q ss_pred CcEEEcCCC--CeEEEeecCccccccCCC-------CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH-----
Q 041034 584 NNILLNSNL--EAFVADFGTARLLHVDSS-------NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA----- 649 (701)
Q Consensus 584 ~NIll~~~~--~~kL~DFGla~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~----- 649 (701)
+||+++.++ .+||+|||+++.+..... ......||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 188 ~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~g~ 265 (352)
T 2jii_A 188 ENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRS--DLQSLGYCMLKWLYGF 265 (352)
T ss_dssp GGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSC
T ss_pred HHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchh--hHHHHHHHHHHHHhCC
Confidence 999999998 999999999987653322 11334799999999999888777765 99999999985
Q ss_pred -----------------------------------------------cccCCCCCCCCHHHHHHHhhc
Q 041034 650 -----------------------------------------------CLRSKPKSRPTMQRISQELEG 670 (701)
Q Consensus 650 -----------------------------------------------cl~~~P~~Rpt~~~i~~~l~~ 670 (701)
||..+|.+||+++++++.|++
T Consensus 266 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 266 LPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp CTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred CCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 677888888888888888765
No 247
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.6e-33 Score=294.86 Aligned_cols=194 Identities=27% Similarity=0.375 Sum_probs=164.1
Q ss_pred HhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhc--CCCCceeeeeeeeeeCc-
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLST--VRHRNIVKLYGFCLHKR- 522 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~- 522 (701)
....++|++.+.||+|+||.||+|.. +++.||||++.... .+.+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 44567899999999999999999987 58999999986432 3567788888877 78999999999998775
Q ss_pred ---EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCeEecCCCCCcEEEcCC
Q 041034 523 ---CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH--------HDCTPSIVHRDISSNNILLNSN 591 (701)
Q Consensus 523 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~givH~Dlkp~NIll~~~ 591 (701)
..++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred ccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 799999999999999999764 4899999999999999999999 77 99999999999999999
Q ss_pred CCeEEEeecCccccccCCCC----ceeecccccccCCCCCCCCcCC----hhhHHHHHHHHHHHHHcccC
Q 041034 592 LEAFVADFGTARLLHVDSSN----RTLRAGTYGYIAPDQRLSPPVN----QKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 592 ~~~kL~DFGla~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~----~~~~~Di~slg~i~~~cl~~ 653 (701)
+.+||+|||+++........ .....||+.|+|||++.+.... .....||||+|+++|+++++
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 99999999999876543321 2334699999999998765322 11346999999999998876
No 248
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.9e-33 Score=289.49 Aligned_cols=199 Identities=24% Similarity=0.355 Sum_probs=169.6
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCcc------ChHHHHHHHHHHHHHhcCC-CCceeeeeeeee
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETE------DSAFVESFQNEARVLSTVR-HRNIVKLYGFCL 519 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 519 (701)
..++|++.+.||+|+||.||+|... +++.||||++...... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4678999999999999999999664 6899999999765321 1234567889999999996 999999999999
Q ss_pred eCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEee
Q 041034 520 HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADF 599 (701)
Q Consensus 520 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DF 599 (701)
+.+..++||||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999997643 589999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccCCCCceeecccccccCCCCCC------CCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRL------SPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
|.+....... ......|++.|+|||.+. ...++.+ .||||+|+++++++.+.+
T Consensus 169 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--~Di~slG~~l~~l~~g~~ 227 (298)
T 1phk_A 169 GFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKE--VDMWSTGVIMYTLLAGSP 227 (298)
T ss_dssp TTCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTH--HHHHHHHHHHHHHHHSSC
T ss_pred cchhhcCCCc-ccccccCCccccCHHHhccccccccccCCcc--cccHhHHHHHHHHHHCCC
Confidence 9998765332 334457999999999874 3334444 499999999999888764
No 249
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.6e-33 Score=294.04 Aligned_cols=197 Identities=20% Similarity=0.334 Sum_probs=160.9
Q ss_pred hcCCccc-eEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEE
Q 041034 449 TEDFHIR-YCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 449 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 525 (701)
.+.|++. +.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++.++ +||||+++++++.+.+..+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI---RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC---HHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh---HHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 4678885 7899999999999965 468999999997654322 46788999999985 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC---eEEEeecCc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE---AFVADFGTA 602 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~---~kL~DFGla 602 (701)
+||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 9999999999999997654 589999999999999999999999 9999999999999988765 999999999
Q ss_pred cccccCCC-------CceeecccccccCCCCCCC-----CcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 603 RLLHVDSS-------NRTLRAGTYGYIAPDQRLS-----PPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 603 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
+....... ......||+.|+|||++.. ..++.+ .||||+|+++++++.+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~--~DiwslG~il~~l~~g~~p 225 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKR--CDLWSLGVILYILLSGYPP 225 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTT--HHHHHHHHHHHHHHHSSCS
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcc--cccHhHHHHHHHHHHCCCC
Confidence 86542211 1223459999999998864 234444 4999999999998887643
No 250
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=296.55 Aligned_cols=197 Identities=25% Similarity=0.376 Sum_probs=159.3
Q ss_pred cCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIY 528 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 528 (701)
++|++.+.||+|+||.||+|... +++.||+|++....... ....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc--cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 57999999999999999999664 78999999997543221 1124557999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccC
Q 041034 529 EYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVD 608 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~ 608 (701)
||+++ +|.+++..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLDK-DLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCSE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccccc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 99975 99998876543 589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 609 SSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
........||+.|+|||++.+ ..++.+. ||||+|+++++|+.+.+.
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~~l~~g~~p 200 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQI--DMWGVGCIFYEMATGRPL 200 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred ccccccccCcccccChhhhcCCCCCCcHH--HHHHHHHHHHHHHhCCCC
Confidence 444455678999999999876 4455554 999999999999988743
No 251
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3e-33 Score=289.54 Aligned_cols=199 Identities=26% Similarity=0.374 Sum_probs=166.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 368999999999999999999664 7899999998764322 22236788999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||++ ++|.+++...... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.++....
T Consensus 81 ~e~~~-~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhhhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 5999998765322 588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccCCC
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
.........+|+.|+|||.+.+.. ++.+ .||||+|+++++++++.+
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--~Di~slG~~l~~l~~g~~ 202 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTA--VDIWSLGCIFAEMVTRRA 202 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTH--HHHHHHHHHHHHHHHSSC
T ss_pred CccccCcccccccccCcHHhhccccCChH--HHHHHHHHHHHHHHhCCC
Confidence 433344457899999999987655 4444 499999999999988764
No 252
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3e-33 Score=292.93 Aligned_cols=193 Identities=25% Similarity=0.390 Sum_probs=156.0
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCcc-----ChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETE-----DSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++...... .......+.+|+.++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 356899999999999999999965 46899999998764321 112234578999999999999999999998766
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC---eEEEe
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE---AFVAD 598 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~---~kL~D 598 (701)
. .++||||+++++|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 899999999999999987644 589999999999999999999999 9999999999999987654 99999
Q ss_pred ecCccccccCCCCceeecccccccCCCCCC---CCcCChhhHHHHHHHHHHHHHc
Q 041034 599 FGTARLLHVDSSNRTLRAGTYGYIAPDQRL---SPPVNQKIIQDIILVSTTALAC 650 (701)
Q Consensus 599 FGla~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~~Di~slg~i~~~c 650 (701)
||+++..... .......||+.|+|||++. ...++.+ .||||+|+++++|
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~--~Di~slG~il~~l 212 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRA--VDCWSLGVILFIC 212 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTH--HHHHHHHHHHHHH
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCch--hhHHHHHHHHHHH
Confidence 9999876422 1223346899999999863 3444444 4999999999863
No 253
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.7e-33 Score=294.47 Aligned_cols=199 Identities=25% Similarity=0.417 Sum_probs=165.6
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee-------
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH------- 520 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 520 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 47899999999999999999966 579999999987654332 223567899999999999999999999887
Q ss_pred -CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEee
Q 041034 521 -KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADF 599 (701)
Q Consensus 521 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DF 599 (701)
.+..++||||+++ ++.+.+..... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3468999999986 78777765433 589999999999999999999999 9999999999999999999999999
Q ss_pred cCccccccC----CCCceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 600 GTARLLHVD----SSNRTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 600 Gla~~~~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
|+|+.+... ........||+.|+|||++.+. .++.+. ||||+|+++++++++.|.
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~--DiwslG~il~ell~g~~p 228 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI--DLWGAGCIMAEMWTRSPI 228 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHh--HHHHHHHHHHHHHhCCCC
Confidence 999876422 1223345689999999988764 345554 999999999999887754
No 254
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.1e-33 Score=296.35 Aligned_cols=194 Identities=24% Similarity=0.302 Sum_probs=158.2
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc-----
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR----- 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 522 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 57899999999999999999955 4689999999976432 3344577889999999999999999999987654
Q ss_pred -EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 523 -CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 523 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
..++||||+++ +|.+++.. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 78888853 488999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
|+..... .......||+.|+|||++.+..++.+. ||||+|+++++++.+.+
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwslG~il~el~~g~~ 224 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMIKGGV 224 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTH--HHHHHHHHHHHHHHSSC
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchH--hHHHHHHHHHHHHhCCC
Confidence 9876432 223345799999999999888887765 99999999999888764
No 255
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-33 Score=319.10 Aligned_cols=186 Identities=25% Similarity=0.385 Sum_probs=154.1
Q ss_pred eEEeeccceEEEEEEc---CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEEEEccC
Q 041034 456 YCIGTGGYGSVYKAEL---PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFIYEYME 532 (701)
Q Consensus 456 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 532 (701)
+.||+|+||.||+|.+ ..++.||||+++.... +....+++.+|+.++++++||||+++++++.. +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 4799999999999944 2467899999976533 23345789999999999999999999999865 45889999999
Q ss_pred CCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccCCC--
Q 041034 533 RGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVDSS-- 610 (701)
Q Consensus 533 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~-- 610 (701)
+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 453 ~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999997654 589999999999999999999999 999999999999999999999999999987654322
Q ss_pred -CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 611 -NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 611 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
......+|+.|+|||++.+..++.+. ||||+|+++++++
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~s--DvwSlGv~l~ell 566 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKS--DVWSFGVLMWEAF 566 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHH--HHHHHHHHHHHHH
Confidence 12233467889999999887777765 9999999999633
No 256
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=294.97 Aligned_cols=286 Identities=23% Similarity=0.258 Sum_probs=199.2
Q ss_pred CCCCCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCccc
Q 041034 22 TSDHCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGT 101 (701)
Q Consensus 22 ~~d~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 101 (701)
....|.|.|+ |+. ++++++. +|. .-.++|++|+|++|.+++..+..|.++++|++|+|++|++++.
T Consensus 26 ~~~~C~~~~~-c~~---------~~~~l~~-iP~---~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (353)
T 2z80_A 26 ASLSCDRNGI-CKG---------SSGSLNS-IPS---GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTI 91 (353)
T ss_dssp -CCEECTTSE-EEC---------CSTTCSS-CCT---TCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cCCCCCCCeE-eeC---------CCCCccc-ccc---cccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCcc
Confidence 4566788776 542 3444442 322 2236888999999998877777888899999999999999888
Q ss_pred CCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCc-ccccCCCCCcEEEceec-ccCCCcCcccc
Q 041034 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP-QEIGNLKSLIWLSVMYN-TVGGPIPSTLF 179 (701)
Q Consensus 102 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~ 179 (701)
.|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+ ..|.++++|++|++++| .++...+..+.
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 171 (353)
T 2z80_A 92 EEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA 171 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT
T ss_pred CHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHcc
Confidence 88888888999999999998887666668888888888888888886554 46777788888888777 45555566677
Q ss_pred cccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEE
Q 041034 180 RLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAEL 259 (701)
Q Consensus 180 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L 259 (701)
++++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|++|++++|.+++..+..+..
T Consensus 172 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~------- 244 (353)
T 2z80_A 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST------- 244 (353)
T ss_dssp TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-----------
T ss_pred CCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-------
Confidence 7777777777777777666667777777777777777665433333344666666666666666543332211
Q ss_pred EcCCCCCccccCcccCCCCCCcEEEccCccCCC----CCcccccCccceeeecCCCCcCCCCCCCc-ccCCCCCCeeecc
Q 041034 260 DLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSG----QIPFAIGKLFNLVSLDLSKNKLSGSFPTG-IGNCTELQHLALN 334 (701)
Q Consensus 260 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~ 334 (701)
....+.++.++|++|.+++ .+|..+..+++|+.|+|++|+++ .+|.. +..+++|++|+|+
T Consensus 245 --------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 245 --------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp ----------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred --------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEee
Confidence 1123445566666666654 35666777888888888888887 45555 4788888888888
Q ss_pred CCccCCCCC
Q 041034 335 HNSLDGTIP 343 (701)
Q Consensus 335 ~N~l~~~~p 343 (701)
+|++.+..|
T Consensus 310 ~N~~~~~~~ 318 (353)
T 2z80_A 310 TNPWDCSCP 318 (353)
T ss_dssp SSCBCCCHH
T ss_pred CCCccCcCC
Confidence 888886544
No 257
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.2e-33 Score=289.24 Aligned_cols=201 Identities=24% Similarity=0.331 Sum_probs=152.3
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.++...++.++||||+++++++.+.+..++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 457899999999999999999965 57899999999765432 2223445555666888999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcC-CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 527 IYEYMERGSLFYVLRDD-DEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
||||+++ +|.+++... .....+++..+..++.|++.||+|||+++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999975 888777542 11236899999999999999999999742 8999999999999999999999999999876
Q ss_pred ccCCCCceeecccccccCCCCC----CCCcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQR----LSPPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
.... ......||+.|+|||++ .+..++.+. ||||+|+++++++.+.+
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~--Di~slG~il~~l~~g~~ 211 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKS--DIWSLGITMIELAILRF 211 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHH--HHHHHHHHHHHHHHTSC
T ss_pred cccc-cccccCCCccccChhhcChhhcCcCCCcHH--HHHHHHHHHHHHHHCCC
Confidence 5332 23334799999999995 444555554 99999999999877664
No 258
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.7e-33 Score=300.77 Aligned_cols=194 Identities=8% Similarity=0.046 Sum_probs=147.2
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHH---HHHhcCCCCceeeee-------ee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEA---RVLSTVRHRNIVKLY-------GF 517 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 517 (701)
..+|++.+.||+|+||.||+|.. .+++.||||++...........+.+.+|+ .+++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 45699999999999999999965 47899999999987654455567788885 45555 799988855 33
Q ss_pred eeeC-----------------cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHH------HHHHHHHHHHHHHHhcCCCC
Q 041034 518 CLHK-----------------RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRR------VNIVKSVAHALSYLHHDCTP 574 (701)
Q Consensus 518 ~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~~~ 574 (701)
+..+ ...|+||||++ |+|.+++..... .+++..+ ..++.||+.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 3322 34899999998 799999986432 2344555 67889999999999999
Q ss_pred CeEecCCCCCcEEEcCCCCeEEEeecCccccccCCCCceeecccccccCCCCCCC--CcCChhhHHHHHHHHHHHHHccc
Q 041034 575 SIVHRDISSNNILLNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLS--PPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 575 givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
||+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.+. ||||+|+++|+|+.
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~--DiwSlG~il~ellt 288 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHAL--NAWQLGLSIYRVWC 288 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHH--HHHHHHHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccc--cHHHHHHHHHHHHh
Confidence 999999999999999999999999999986532 2224567799999999977 5566555 99999999998766
Q ss_pred CC
Q 041034 653 SK 654 (701)
Q Consensus 653 ~~ 654 (701)
+.
T Consensus 289 g~ 290 (371)
T 3q60_A 289 LF 290 (371)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 259
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.9e-33 Score=297.67 Aligned_cols=199 Identities=25% Similarity=0.386 Sum_probs=169.1
Q ss_pred hcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChH--------------HHHHHHHHHHHHhcCCCCceeee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSA--------------FVESFQNEARVLSTVRHRNIVKL 514 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~--------------~~~~~~~E~~~l~~l~h~niv~l 514 (701)
.++|++.+.||+|+||.||+|.. +++.||||++......... ..+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 57899999999999999999987 8999999998754322111 12678999999999999999999
Q ss_pred eeeeeeCcEEEEEEEccCCCCHHHH------HhcCCCccCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCcEE
Q 041034 515 YGFCLHKRCMFFIYEYMERGSLFYV------LRDDDEAIELNWTRRVNIVKSVAHALSYLHH-DCTPSIVHRDISSNNIL 587 (701)
Q Consensus 515 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~givH~Dlkp~NIl 587 (701)
++++.+.+..++||||+++++|.++ +.... ...+++..+..++.|++.||+|||+ + ||+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 54421 2369999999999999999999998 8 9999999999999
Q ss_pred EcCCCCeEEEeecCccccccCCCCceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHcccCCC
Q 041034 588 LNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 588 l~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
++.++.+||+|||.+...... ......||+.|+|||.+.+. .++. ...||||+|+++++++.+.+
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~-~~~Di~slG~il~~l~~g~~ 250 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNG-AKVDIWSLGICLYVMFYNVV 250 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEH-HHHHHHHHHHHHHHHHHSSC
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCc-chhhHHHHHHHHHHHHhCCC
Confidence 999999999999999876432 33445799999999999877 4443 23599999999999887764
No 260
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1e-32 Score=302.75 Aligned_cols=210 Identities=17% Similarity=0.300 Sum_probs=179.7
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCC-CceeeeeeeeeeCcEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH-RNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l 526 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++...... .++.+|+++++.++| +++..+..++...+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 47899999999999999999965 57999999988765433 346789999999986 666677777778889999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE---cCCCCeEEEeecCcc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL---NSNLEAFVADFGTAR 603 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll---~~~~~~kL~DFGla~ 603 (701)
||||+ +++|.+++..... .+++..++.|+.||+.||+|||++ +||||||||+|||+ +.++.+||+|||+|+
T Consensus 81 vme~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 8899999975433 589999999999999999999999 99999999999999 688999999999998
Q ss_pred ccccCCCC-------ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH---------------------------
Q 041034 604 LLHVDSSN-------RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA--------------------------- 649 (701)
Q Consensus 604 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~--------------------------- 649 (701)
.+...... .....||+.|+|||.+.+..++.+. ||||||+++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~s--DvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRD--DLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHH--HHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHH--HHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc
Confidence 77543321 2245799999999999988887765 99999999984
Q ss_pred ----------------------cccCCCCCCCCHHHHHHHhhcC
Q 041034 650 ----------------------CLRSKPKSRPTMQRISQELEGK 671 (701)
Q Consensus 650 ----------------------cl~~~P~~Rpt~~~i~~~l~~~ 671 (701)
||..+|.+||++.+|.+.|+..
T Consensus 233 ~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 233 VATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 8889999999999999987654
No 261
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=295.64 Aligned_cols=223 Identities=23% Similarity=0.421 Sum_probs=180.1
Q ss_pred cHHHHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 441 LYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 441 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
..+++....++|++.+.||+|+||.||+|...+ .||+|+++...... ...+.+.+|+.++++++||||+++++++.+
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 100 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMS 100 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence 345556667899999999999999999997643 59999987653322 123557789999999999999999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
.+..++||||+++++|.+++.... ..+++..+..++.|++.||+|||++ |++||||||+||+++ ++.+||+|||
T Consensus 101 ~~~~~iv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg 174 (319)
T 2y4i_B 101 PPHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFG 174 (319)
T ss_dssp SSCEEEECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCS
T ss_pred CCceEEEeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecC
Confidence 999999999999999999997643 2588999999999999999999999 999999999999998 6799999999
Q ss_pred CccccccC-----CCCceeecccccccCCCCCCCC---------cCChhhHHHHHHHHHHHHH-----------------
Q 041034 601 TARLLHVD-----SSNRTLRAGTYGYIAPDQRLSP---------PVNQKIIQDIILVSTTALA----------------- 649 (701)
Q Consensus 601 la~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~---------~~~~~~~~Di~slg~i~~~----------------- 649 (701)
+++..... ........||+.|+|||.+... .++.+ .||||+|+++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~--~Di~slG~il~el~~g~~p~~~~~~~~~~ 252 (319)
T 2y4i_B 175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH--SDVFALGTIWYELHAREWPFKTQPAEAII 252 (319)
T ss_dssp CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHH--HHHHHHHHHHHHHHHSSCSSSSCCHHHHH
T ss_pred CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCch--hhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 98765321 1222334689999999987642 23444 599999999984
Q ss_pred --------------------------cccCCCCCCCCHHHHHHHhhcCCCc
Q 041034 650 --------------------------CLRSKPKSRPTMQRISQELEGKTPM 674 (701)
Q Consensus 650 --------------------------cl~~~P~~Rpt~~~i~~~l~~~~~~ 674 (701)
||..+|.+|||+.++++.|+.....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 253 WQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp HHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred HHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 8889999999999999999987644
No 262
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-32 Score=298.93 Aligned_cols=195 Identities=22% Similarity=0.304 Sum_probs=166.3
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC------CCCceeeeeeeeee
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV------RHRNIVKLYGFCLH 520 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~ 520 (701)
...+|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+++++.+ .|+||+++++++..
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 356799999999999999999955 46899999999754 23346677888888776 57799999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC--eEEEe
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE--AFVAD 598 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~--~kL~D 598 (701)
....++||||+. ++|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CCeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 999999999996 599999876542 2489999999999999999999999 9999999999999999887 99999
Q ss_pred ecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 599 FGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 599 FGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
||+|+.... ......||+.|+|||++.+..++.+. ||||+|+++++|+++.|.
T Consensus 246 FG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~--DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 246 FGSSCYEHQ---RVYTYIQSRFYRAPEVILGARYGMPI--DMWSLGCILAELLTGYPL 298 (429)
T ss_dssp CTTCEETTC---CCCSSCSCGGGCCHHHHHTBCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred cccceecCC---cccccCCCCCccChHHHhCCCCCchH--HHHhHHHHHHHHHhCCCC
Confidence 999976532 22345799999999999888887765 999999999999888753
No 263
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.4e-33 Score=292.48 Aligned_cols=202 Identities=24% Similarity=0.383 Sum_probs=150.1
Q ss_pred hhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
...++|++.+.||+|+||.||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++...+..+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 44678999999999999999999664 6899999998754322 23467889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcC-----CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 526 FIYEYMERGSLFYVLRDD-----DEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
+||||+++++|.+++... .....+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 999999999999998641 1123589999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCC-----CceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 601 TARLLHVDSS-----NRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 601 la~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
.++....... ......||+.|+|||.+.+ ..++.+ .||||+|+++++++.+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~--~Di~slG~il~~l~~g~~ 225 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK--ADIWSFGITAIELATGAA 225 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTH--HHHHHHHHHHHHHHHSSC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCch--hhHHHHHHHHHHHHhCCC
Confidence 9976643221 1233469999999998764 334444 499999999999887653
No 264
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.5e-33 Score=289.65 Aligned_cols=203 Identities=21% Similarity=0.358 Sum_probs=163.7
Q ss_pred cHHHHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC--CCceeeeeeee
Q 041034 441 LYEDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR--HRNIVKLYGFC 518 (701)
Q Consensus 441 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~ 518 (701)
.++.+....++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 34444555678999999999999999999888899999999976543 2344678899999999997 59999999999
Q ss_pred eeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEe
Q 041034 519 LHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVAD 598 (701)
Q Consensus 519 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~D 598 (701)
.+.+..++||| +.+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++++ +.+||+|
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEee
Confidence 99999999999 55779999998754 589999999999999999999999 9999999999999964 8999999
Q ss_pred ecCccccccCCC--CceeecccccccCCCCCCC-----------CcCChhhHHHHHHHHHHHHHcccCC
Q 041034 599 FGTARLLHVDSS--NRTLRAGTYGYIAPDQRLS-----------PPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 599 FGla~~~~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
||+++....... ......||+.|+|||.+.+ ..++.+ .||||+|+++++++.+.
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~--~Di~slG~il~el~~g~ 236 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK--SDVWSLGCILYYMTYGK 236 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHH--HHHHHHHHHHHHHHHSS
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCch--HHHHHHHHHHHHHHhCC
Confidence 999987653322 1234568999999999865 234444 49999999999866554
No 265
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=100.00 E-value=7.7e-33 Score=287.58 Aligned_cols=251 Identities=25% Similarity=0.312 Sum_probs=169.4
Q ss_pred CCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCccc--CC
Q 041034 26 CNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGT--IP 103 (701)
Q Consensus 26 c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--~p 103 (701)
|.|.++.|+..+ ++ .++. ...++|++|+|++|.++...+..|.++++|++|+|++|.++.. .|
T Consensus 7 C~~~~l~c~~~~-----------l~-~ip~---~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 7 CSGTEIRCNSKG-----------LT-SVPT---GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp EETTEEECCSSC-----------CS-SCCS---CCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred eCCCEEEcCCCC-----------cc-cCCC---CCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 788888887432 22 1222 2236788888888888855555678888888888888888733 35
Q ss_pred cccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCc-ccccCCCCCcEEEceecccCCCcCccccccc
Q 041034 104 KEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLP-QEIGNLKSLIWLSVMYNTVGGPIPSTLFRLT 182 (701)
Q Consensus 104 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 182 (701)
..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+.+..+..+..++
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 150 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 150 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCT
T ss_pred cccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCc
Confidence 66777888888888888887 355567788888888888888876654 5667777777777777777666666666666
Q ss_pred ccceeEeeecccCC-CCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEc
Q 041034 183 NLERLFLGCNQFNG-TIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261 (701)
Q Consensus 183 ~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 261 (701)
+|++|+|++|.+++ .+|..+..+++|++|++++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.|+|
T Consensus 151 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 230 (306)
T 2z66_A 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 230 (306)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEEC
T ss_pred CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeEC
Confidence 66666666666665 45566666666666666666666555666666666666666666666655555556666666666
Q ss_pred CCCCCccccCcccCCCC-CCcEEEccCccCCC
Q 041034 262 SDNKIRGIIPDELSKLS-NLQYLNLSSNLLSG 292 (701)
Q Consensus 262 ~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~ 292 (701)
++|++++..|..+..++ +|+.|+|++|.+++
T Consensus 231 ~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 231 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp TTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 66666666665565553 56666666666654
No 266
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5e-33 Score=296.01 Aligned_cols=194 Identities=26% Similarity=0.351 Sum_probs=148.2
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK----- 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (701)
..++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+++.+|+.+++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 357899999999999999999954 5789999999976432 334457788999999999999999999998654
Q ss_pred -cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 522 -RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 522 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
...|+||||+ +++|.+++... .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 67999988653 589999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 601 TARLLHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 601 la~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
+|+..... .....||+.|+|||.+.+ ..++.+. ||||+|+++++++.+.|
T Consensus 178 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~ell~g~~ 228 (367)
T 2fst_X 178 LARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTV--DIWSVGCIMAELLTGRT 228 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTH--HHHHHHHHHHHHHHSSC
T ss_pred cccccccc---CCCcCcCcCccChHHHcCCcCCCchh--hHHHHHHHHHHHHhCCC
Confidence 99875422 334579999999999876 4556555 99999999998877764
No 267
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-32 Score=283.02 Aligned_cols=212 Identities=24% Similarity=0.392 Sum_probs=173.9
Q ss_pred hhhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
...++|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch-HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 44678999999999999999999664 68999999987644322 22467889999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC---CCeEEEeecCc
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN---LEAFVADFGTA 602 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~---~~~kL~DFGla 602 (701)
+||||+++++|.+++.... .+++..+..++.|++.||+|||++ |++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999999887544 589999999999999999999999 99999999999999754 47999999999
Q ss_pred cccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC-CCCCHHHHHHHhh
Q 041034 603 RLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK-SRPTMQRISQELE 669 (701)
Q Consensus 603 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~-~Rpt~~~i~~~l~ 669 (701)
+...... ......+|+.|+|||.+.+. ++.+ .||||+|+++++++.+.+. .-.+..++.+.+.
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~--~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 235 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEK--CDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCHHHHTTC-CCTH--HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eeecCCC-ccccccCcccccChHHhcCC-CCCc--hhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 8764332 22334689999999988664 4444 4999999999998887643 3334445544443
No 268
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=1.3e-32 Score=290.24 Aligned_cols=201 Identities=24% Similarity=0.342 Sum_probs=163.1
Q ss_pred hhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHH-HhcCCCCceeeeeeeeeeCcEE
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARV-LSTVRHRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~ 524 (701)
...++|++.+.||+|+||.||+|.. .+|+.||||++....... ...++..|..+ ++.++||||+++++++.+.+..
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH--HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH--HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 4567899999999999999999965 579999999997654322 23455556555 7888999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcC-CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 525 FFIYEYMERGSLFYVLRDD-DEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
++||||+++ +|.+++... .....+++..+..++.||+.||+|||++. ||+||||||+||+++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999986 998888642 11236899999999999999999999632 89999999999999999999999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCC----CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLS----PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
..... .......||+.|+|||++.+ ..++.+ .||||+|+++|+++.+.+
T Consensus 203 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--~Di~slG~il~el~tg~~ 255 (340)
T 3an0_A 203 YLVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVK--SDIWSLGITMIELAILRF 255 (340)
T ss_dssp HHSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHH--HHHHHHHHHHHHHHHTSC
T ss_pred ecccc-cccccCCCCccccCccccccccccCCCCch--hhHHHHHHHHHHHHHCCC
Confidence 76422 12223469999999998643 345555 499999999999887764
No 269
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=1.9e-32 Score=290.66 Aligned_cols=275 Identities=22% Similarity=0.226 Sum_probs=190.9
Q ss_pred cEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccc
Q 041034 65 QYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144 (701)
Q Consensus 65 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 144 (701)
...++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 34 ~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 110 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred eEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCC
Confidence 34677888887 5566554 58899999999998777778888999999999999988887888888888888888888
Q ss_pred cCCCCCcccccCCCCCcEEEceecccCCCcC-cccccccccceeEeeec-ccCCCCCCCCCCccccCccccccccccCCc
Q 041034 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIP-STLFRLTNLERLFLGCN-QFNGTIPREIGNLKNLTHLSIITNKLTGAI 222 (701)
Q Consensus 145 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 222 (701)
++++..+..|.++++|++|++++|.+++..+ ..+..+++|++|++++| .+++..+..+.++++|++|++++|++++..
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 190 (353)
T 2z80_A 111 YLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYE 190 (353)
T ss_dssp CCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred cCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccC
Confidence 8887666667777777777777777765444 35666666666666666 344444455555555555555555555555
Q ss_pred cccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccc---c
Q 041034 223 PSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAI---G 299 (701)
Q Consensus 223 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~---~ 299 (701)
|..+..+++|++|++++|+++.. .+..+..+++|+.|++++|.+++..+..+ .
T Consensus 191 ~~~l~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~ 246 (353)
T 2z80_A 191 PKSLKSIQNVSHLILHMKQHILL------------------------LEIFVDVTSSVECLELRDTDLDTFHFSELSTGE 246 (353)
T ss_dssp TTTTTTCSEEEEEEEECSCSTTH------------------------HHHHHHHTTTEEEEEEESCBCTTCCCC------
T ss_pred HHHHhccccCCeecCCCCccccc------------------------hhhhhhhcccccEEECCCCcccccccccccccc
Confidence 55555555555555555555432 22222334444555555554444332222 1
Q ss_pred CccceeeecCCCCcCCC----CCCCcccCCCCCCeeeccCCccCCCCCcc-ccccccCCeEEcccccCcccCC
Q 041034 300 KLFNLVSLDLSKNKLSG----SFPTGIGNCTELQHLALNHNSLDGTIPPE-IGKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 300 ~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~g~~p 367 (701)
....++.++|++|.+++ .+|..+..+++|+.|+|++|+++ .+|.. ++.+++|++|+|++|+++|.+|
T Consensus 247 ~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 247 TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 23456666777776665 47888999999999999999999 56665 5899999999999999999887
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.98 E-value=3.4e-32 Score=286.49 Aligned_cols=187 Identities=24% Similarity=0.364 Sum_probs=136.6
Q ss_pred hhcCCccce-EEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee----C
Q 041034 448 ATEDFHIRY-CIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH----K 521 (701)
Q Consensus 448 ~~~~y~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~ 521 (701)
..++|.+.+ .||+|+||.||+|... +++.||||++.... ....+....++.++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 467899855 6999999999999664 69999999996532 111222334566799999999999876 4
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC---CCCeEEEe
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---NLEAFVAD 598 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---~~~~kL~D 598 (701)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 568999999999999999986542 3589999999999999999999999 9999999999999976 45699999
Q ss_pred ecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 599 FGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 599 FGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
||+++..... ......||+.|+|||.+.+..++.+. ||||+|+++++
T Consensus 175 fg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~~ 221 (336)
T 3fhr_A 175 FGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIMYI 221 (336)
T ss_dssp CTTCEEC------------------------CHHHHHH--HHHHHHHHHHH
T ss_pred cccceecccc--ccccCCCCcCccChhhhCCCCCCchh--hHHHHHHHHHH
Confidence 9999866432 23345789999999999777766654 99999999985
No 271
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.98 E-value=3.1e-32 Score=289.03 Aligned_cols=196 Identities=25% Similarity=0.430 Sum_probs=162.8
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK----- 521 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 521 (701)
..++|++.+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||||+++++++...
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 4578999999999999999999654 68999999997543 334457788999999999999999999988754
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
...++||||++ ++|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999997 4999998763 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCC----------ceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 602 ARLLHVDSSN----------RTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 602 a~~~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
++........ .....||+.|+|||++.+ ..++.+. ||||+|+++++++.+.|
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~--Di~slG~il~~l~~g~~ 221 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAM--DVWSCGCILAELFLRRP 221 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHH--HHHHHHHHHHHHHHSSC
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchh--hHHHHHHHHHHHHhCCC
Confidence 9876432211 122468999999998654 4555554 99999999998776653
No 272
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.98 E-value=9.7e-33 Score=314.83 Aligned_cols=197 Identities=24% Similarity=0.333 Sum_probs=162.2
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcC----CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELP----DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH 520 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 520 (701)
.....++|++.+.||+|+||.||+|.+. .+..||+|+++... .....+.+.+|+.++++++||||+++++++.+
T Consensus 385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 462 (656)
T 2j0j_A 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462 (656)
T ss_dssp TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 3445678999999999999999999653 24679999987643 23445789999999999999999999999854
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
+..++||||+++|+|.++++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 463 -~~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 463 -NPVWIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred -CceEEEEEcCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecC
Confidence 568999999999999999976432 589999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCC-CceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc
Q 041034 601 TARLLHVDSS-NRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL 651 (701)
Q Consensus 601 la~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl 651 (701)
+|+....... ......+|+.|+|||.+.+..++.+. ||||+|+++++++
T Consensus 537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~--DiwSlG~il~ell 586 (656)
T 2j0j_A 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSAS--DVWMFGVCMWEIL 586 (656)
T ss_dssp CCCSCCC----------CCGGGCCHHHHHHCCCCHHH--HHHHHHHHHHHHH
T ss_pred CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchh--hHHHHHHHHHHHH
Confidence 9987643322 12234577899999998877777665 9999999999644
No 273
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.98 E-value=2.4e-32 Score=283.83 Aligned_cols=277 Identities=25% Similarity=0.234 Sum_probs=160.4
Q ss_pred EEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCC--CccccCCccccceeeccc
Q 041034 66 YLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGT--TPIEIGSLRNLEELYLRS 143 (701)
Q Consensus 66 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~ 143 (701)
.+++++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 5666666665 3444332 4666666666666644444566666666666666666522 134444455555555555
Q ss_pred ccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCC-CCCCCccccCccccccccccCCc
Q 041034 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP-REIGNLKNLTHLSIITNKLTGAI 222 (701)
Q Consensus 144 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~ 222 (701)
|.++. +|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..
T Consensus 88 n~i~~-------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 88 NGVIT-------------------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp CSEEE-------------------------EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECS
T ss_pred Ccccc-------------------------ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccc
Confidence 55542 22334444555555555555554333 34555566666666666666555
Q ss_pred cccccCCCcccEEEeccCCCCC-CCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCc
Q 041034 223 PSTLGHLTSLLYLDLSFNQLHS-FIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKL 301 (701)
Q Consensus 223 p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 301 (701)
|..+..+++|++|++++|.+++ ..|..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..+..+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 5556666666666666666655 455566666666666666666666666666666666667776666666555566666
Q ss_pred cceeeecCCCCcCCCCCCCcccCCC-CCCeeeccCCccCCCCC--ccccccccCCeEEcccccCcccCCCCc
Q 041034 302 FNLVSLDLSKNKLSGSFPTGIGNCT-ELQHLALNHNSLDGTIP--PEIGKILLLQNLDLSHNNLSGTIPMTL 370 (701)
Q Consensus 302 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p--~~~~~l~~L~~l~ls~N~l~g~~p~~~ 370 (701)
++|+.|+|++|++++..|..+..++ +|++|+|++|++++.-+ .....+...+.+.+..+.+.|..|..+
T Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp TTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred ccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhh
Confidence 6666666666666666666666663 66666666666665322 112223334444455555555555443
No 274
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.98 E-value=6.2e-32 Score=283.85 Aligned_cols=190 Identities=18% Similarity=0.324 Sum_probs=164.4
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeee--CcEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLH--KRCM 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~ 524 (701)
.++|++.+.||+|+||.||+|.. .+++.||||+++... .+.+.+|+.++++++ ||||+++++++.+ ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 47899999999999999999954 578999999997543 367889999999997 9999999999987 6678
Q ss_pred EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC-CeEEEeecCcc
Q 041034 525 FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL-EAFVADFGTAR 603 (701)
Q Consensus 525 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~-~~kL~DFGla~ 603 (701)
++||||+++++|.++++ .+++..+..++.|++.||+|||++ ||+||||||+||+++.++ .+||+|||+|+
T Consensus 109 ~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999999885 378899999999999999999999 999999999999999776 89999999998
Q ss_pred ccccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
...... ......+|+.|+|||.+.+ ..++.+. ||||+|+++++|+.+.+.
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~--DiwslG~il~~ll~g~~p 230 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSL--DMWSLGCMLASMIFRKEP 230 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHH--HHHHHHHHHHHHHHTCSS
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchh--hHHHHHHHHHHHHhCCCC
Confidence 765332 3344579999999999876 4455554 999999999999988743
No 275
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.98 E-value=3.5e-32 Score=286.63 Aligned_cols=194 Identities=19% Similarity=0.336 Sum_probs=166.2
Q ss_pred hcCCccceEEeeccceEEEEEEc--CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCC------ceeeeeeeeee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL--PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR------NIVKLYGFCLH 520 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~ 520 (701)
.++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+.+++.++|+ +++++++++.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 57899999999999999999965 36889999999753 23457788999999888655 59999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC----------
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---------- 590 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---------- 590 (701)
.+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ ||+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 7899999976542 2588999999999999999999999 9999999999999987
Q ss_pred ---------CCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 591 ---------NLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 591 ---------~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
++.+||+|||+++..... .....||+.|+|||++.+..++.+. ||||+|+++++++.+.+.
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~g~~p 233 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPC--DVWSIGCILIEYYLGFTV 233 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred cccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcch--hhHHHHHHHHHHHhCCCC
Confidence 678999999999865322 2345799999999999888777765 999999999999888643
No 276
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.98 E-value=1.3e-32 Score=288.39 Aligned_cols=201 Identities=28% Similarity=0.418 Sum_probs=165.0
Q ss_pred hhhcCCccceEEeeccceEEEEEEc--CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC---CCCceeeeeeeee--
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL--PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV---RHRNIVKLYGFCL-- 519 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~-- 519 (701)
.+.++|++.+.||+|+||.||+|.. .+++.||+|++........ ....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc-CCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 4568899999999999999999976 4688999999875432211 113455677766665 8999999999987
Q ss_pred ---eCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEE
Q 041034 520 ---HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFV 596 (701)
Q Consensus 520 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL 596 (701)
.....++||||++ |+|.+++...... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 5567899999998 5999999765432 489999999999999999999999 9999999999999999999999
Q ss_pred EeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 597 ADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 597 ~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
+|||.++...... ......||+.|+|||.+.+..++.+. ||||+|+++++++.+.+.
T Consensus 162 ~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~--Di~slG~il~~l~~g~~p 218 (326)
T 1blx_A 162 ADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPV--DLWSVGCIFAEMFRRKPL 218 (326)
T ss_dssp CSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred ecCcccccccCCC-CccccccccceeCHHHHhcCCCCcch--hHHHHHHHHHHHHcCCCC
Confidence 9999998764322 23345789999999999887777665 999999999988776643
No 277
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=6.4e-33 Score=289.01 Aligned_cols=213 Identities=23% Similarity=0.338 Sum_probs=168.5
Q ss_pred HhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccCh---HHHHHHHHHHHHHhcC----CCCceeeeeee
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTV----RHRNIVKLYGF 517 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l----~h~niv~l~~~ 517 (701)
....++|++.+.||+|+||.||+|.. .+++.||||++........ .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 44567899999999999999999966 4689999999976543221 1123456788888888 89999999999
Q ss_pred eeeCcEEEEEEEc-cCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc-CCCCeE
Q 041034 518 CLHKRCMFFIYEY-MERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN-SNLEAF 595 (701)
Q Consensus 518 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~-~~~~~k 595 (701)
+.+.+..++|||| +.+++|.+++.... .+++..+..++.|++.||+|||++ ||+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 78999999998644 589999999999999999999999 999999999999999 889999
Q ss_pred EEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------
Q 041034 596 VADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------- 649 (701)
Q Consensus 596 L~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------- 649 (701)
|+|||+++..... ......||+.|+|||.+.+..+... ..||||+|+++++
T Consensus 181 l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~-~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (312)
T 2iwi_A 181 LIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHAL-PATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVS 257 (312)
T ss_dssp ECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHH-HHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSC
T ss_pred EEEcchhhhcccC--cccccCCcccccCceeeecCCCCCc-cchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCC
Confidence 9999999876532 2344569999999998876655432 2599999999985
Q ss_pred ---------cccCCCCCCCCHHHHHHH
Q 041034 650 ---------CLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 650 ---------cl~~~P~~Rpt~~~i~~~ 667 (701)
||..+|.+||+++|+++.
T Consensus 258 ~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 258 PDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 777888888888888763
No 278
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.98 E-value=3.7e-32 Score=291.67 Aligned_cols=197 Identities=24% Similarity=0.338 Sum_probs=159.7
Q ss_pred HhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee----
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH---- 520 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 520 (701)
....++|++.+.||+|+||.||+|.. .+++.||||++...... ..+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 75 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDE 75 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC---
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCcc
Confidence 45678999999999999999999954 57999999999765322 2479999999999999999999844
Q ss_pred ----------------------------------CcEEEEEEEccCCCCHHHHHhcC-CCccCCCHHHHHHHHHHHHHHH
Q 041034 521 ----------------------------------KRCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRRVNIVKSVAHAL 565 (701)
Q Consensus 521 ----------------------------------~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L 565 (701)
....++||||+++ +|.+.+... .....+++..+..++.||+.||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 3348899999985 887777542 1123689999999999999999
Q ss_pred HHHhcCCCCCeEecCCCCCcEEEc-CCCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCc-CChhhHHHHHHH
Q 041034 566 SYLHHDCTPSIVHRDISSNNILLN-SNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILV 643 (701)
Q Consensus 566 ~~LH~~~~~givH~Dlkp~NIll~-~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~sl 643 (701)
+|||++ ||+||||||+||+++ .++.+||+|||+|+...... ......+|+.|+|||.+.+.. ++.+. ||||+
T Consensus 155 ~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~--Diwsl 228 (383)
T 3eb0_A 155 GFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSI--DLWSI 228 (383)
T ss_dssp HHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHH--HHHHH
T ss_pred HHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcch--hhhhH
Confidence 999998 999999999999998 68899999999998764333 233457899999999887654 55554 99999
Q ss_pred HHHHHHcccCCCC
Q 041034 644 STTALACLRSKPK 656 (701)
Q Consensus 644 g~i~~~cl~~~P~ 656 (701)
|+++++|+.+.|.
T Consensus 229 G~il~ell~g~~p 241 (383)
T 3eb0_A 229 GCVFGELILGKPL 241 (383)
T ss_dssp HHHHHHHHHSSCS
T ss_pred HHHHHHHHhCCCC
Confidence 9999998887653
No 279
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.98 E-value=2.5e-32 Score=294.55 Aligned_cols=196 Identities=24% Similarity=0.328 Sum_probs=164.1
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC--------CCceeeeeeeee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR--------HRNIVKLYGFCL 519 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~ 519 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 47899999999999999999954 56899999999753 334577889999999985 788999999987
Q ss_pred ----eCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCC---
Q 041034 520 ----HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNL--- 592 (701)
Q Consensus 520 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~--- 592 (701)
.....++||||+ ++++.+.+..... ..+++..+..++.||+.||+|||+++ ||+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIKSNY-QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 556899999999 5577666654322 25899999999999999999999854 899999999999998775
Q ss_pred ----------------------------------------------CeEEEeecCccccccCCCCceeecccccccCCCC
Q 041034 593 ----------------------------------------------EAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQ 626 (701)
Q Consensus 593 ----------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~ 626 (701)
.+||+|||.|+..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 8999999999876432 234579999999999
Q ss_pred CCCCcCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 627 RLSPPVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 627 ~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
+.+..++.++ ||||+|+++|+|+.+.+..
T Consensus 265 ~~~~~~~~~~--DiwslG~il~elltg~~pf 293 (397)
T 1wak_A 265 LIGSGYNTPA--DIWSTACMAFELATGDYLF 293 (397)
T ss_dssp HHTSCCCTHH--HHHHHHHHHHHHHHSSCSC
T ss_pred hcCCCCCcHH--HHHHHHHHHHHHhhCCCCC
Confidence 9888877765 9999999999999987544
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=3e-33 Score=292.55 Aligned_cols=195 Identities=22% Similarity=0.286 Sum_probs=162.3
Q ss_pred HhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccCh---HHHHHHHHHHHHHhcCC--CCceeeeeeeee
Q 041034 446 INATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDS---AFVESFQNEARVLSTVR--HRNIVKLYGFCL 519 (701)
Q Consensus 446 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 519 (701)
....++|++.+.||+|+||.||+|.. .+++.||||++........ ...+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 44567899999999999999999954 5789999999976543210 11244677999999996 599999999999
Q ss_pred eCcEEEEEEEccCC-CCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc-CCCCeEEE
Q 041034 520 HKRCMFFIYEYMER-GSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN-SNLEAFVA 597 (701)
Q Consensus 520 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~-~~~~~kL~ 597 (701)
+++..++||||+.+ ++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 99999999999986 89999997644 589999999999999999999999 999999999999999 78999999
Q ss_pred eecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 598 DFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 598 DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
|||+++..... ......||+.|+|||++.+..+... ..||||+|+++++
T Consensus 193 Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~~Di~slG~il~e 241 (320)
T 3a99_A 193 DFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGR-SAAVWSLGILLYD 241 (320)
T ss_dssp CCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHH-HHHHHHHHHHHHH
T ss_pred eCccccccccc--cccCCCCCccCCChHHhccCCCCCc-cchHHhHHHHHHH
Confidence 99999876532 2334569999999998876655332 2499999999996
No 281
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.8e-32 Score=296.37 Aligned_cols=198 Identities=26% Similarity=0.417 Sum_probs=150.0
Q ss_pred hcCCcc-ceEEeeccceEEEEEEcC---CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee--Cc
Q 041034 449 TEDFHI-RYCIGTGGYGSVYKAELP---DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH--KR 522 (701)
Q Consensus 449 ~~~y~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 522 (701)
.+.|.+ .++||+|+||.||+|... +++.||||++...... ..+.+|+.++++++||||+++++++.. ..
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 345666 557999999999999754 5789999999765432 467899999999999999999999954 67
Q ss_pred EEEEEEEccCCCCHHHHHhcCC------CccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE----cCCC
Q 041034 523 CMFFIYEYMERGSLFYVLRDDD------EAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL----NSNL 592 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll----~~~~ 592 (701)
..++||||+++ +|.+++.... ....+++..+..++.||+.||+|||++ ||+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 89999999975 8888775321 122489999999999999999999999 99999999999999 6779
Q ss_pred CeEEEeecCccccccCC---CCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 593 EAFVADFGTARLLHVDS---SNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 593 ~~kL~DFGla~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
.+||+|||+|+...... .......||+.|+|||++.+.. ++.+. ||||+|+++|+|+.+.|..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~--DiwSlG~il~ell~g~~pf 236 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAI--DIWAIGCIFAELLTSEPIF 236 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHH--HHHHHHHHHHHHHHSSCTT
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchh--hhHHHHHHHHHHHhCCCCC
Confidence 99999999998765322 2233457999999999987744 55554 9999999999999887543
No 282
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.97 E-value=9.4e-32 Score=286.48 Aligned_cols=196 Identities=26% Similarity=0.402 Sum_probs=164.8
Q ss_pred hhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC----
Q 041034 447 NATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK---- 521 (701)
Q Consensus 447 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 521 (701)
...++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++...
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc
Confidence 3456899999999999999999965 468899999997543 334457889999999999999999999998765
Q ss_pred -cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 522 -RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 522 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
...++||||+++ +|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~iv~e~~~~-~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 102 MKDVYIVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp CCCEEEEEECCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred cceEEEEEcccCc-CHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 368999999975 999998764 489999999999999999999999 99999999999999999999999999
Q ss_pred CccccccCCCC---ceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHcccCC
Q 041034 601 TARLLHVDSSN---RTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 601 la~~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
+++........ .....||+.|+|||++.+. .++.+. ||||+|+++++++.+.
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~--DiwslG~il~ell~g~ 229 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI--DIWSVGCILAEMLSNR 229 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHH--HHHHHHHHHHHHHHSS
T ss_pred ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcch--hHHHHHHHHHHHHHCC
Confidence 99876533221 2345799999999986543 355554 9999999999877665
No 283
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=2e-32 Score=294.48 Aligned_cols=195 Identities=23% Similarity=0.321 Sum_probs=157.3
Q ss_pred hcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCc------
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKR------ 522 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 522 (701)
..+|++.+.||+|+||.||+|+...+..||+|++...... ..+|+.+++.++||||+++++++....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 4579999999999999999998877777999988764322 246999999999999999999986533
Q ss_pred EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc-CCCCeEEEeecC
Q 041034 523 CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN-SNLEAFVADFGT 601 (701)
Q Consensus 523 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~-~~~~~kL~DFGl 601 (701)
..++||||++++.+............+++..+..++.||+.||+|||++ ||+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3889999998754433332211223689999999999999999999999 999999999999999 789999999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccCCCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
|+...... ......+|+.|+|||.+.+.. ++.+. ||||+|+++|+|+.+.|.
T Consensus 189 a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwSlG~il~ell~g~~p 241 (394)
T 4e7w_A 189 AKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNI--DIWSTGCVMAELMQGQPL 241 (394)
T ss_dssp CEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred cccccCCC-CCcccccCcCccCHHHHcCCCCCCcHH--HHHHHHHHHHHHHhCCCC
Confidence 98764333 233457899999999886653 55554 999999999998877643
No 284
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.7e-32 Score=296.34 Aligned_cols=191 Identities=22% Similarity=0.329 Sum_probs=150.8
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 526 (701)
...+|.+.+.||+|+||+||.....+++.||||++...... .+.+|+.+++++ +||||+++++++.+....|+
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 34568999999999999976555557899999999764432 346799999999 79999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC-----CCCeEEEeecC
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS-----NLEAFVADFGT 601 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~-----~~~~kL~DFGl 601 (701)
||||+++ +|.+++..... ...+..+..++.||+.||+|||++ +|+||||||+||+++. ...+||+|||+
T Consensus 96 v~E~~~g-~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 96 AIELCAA-TLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEECCSE-EHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEECCCC-CHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 9999974 99999986543 244456678999999999999999 9999999999999953 34688999999
Q ss_pred ccccccCC---CCceeecccccccCCCCCCC---CcCChhhHHHHHHHHHHHHHccc
Q 041034 602 ARLLHVDS---SNRTLRAGTYGYIAPDQRLS---PPVNQKIIQDIILVSTTALACLR 652 (701)
Q Consensus 602 a~~~~~~~---~~~~~~~gt~~y~aPE~~~~---~~~~~~~~~Di~slg~i~~~cl~ 652 (701)
|+...... .......||+.|+|||++.+ ..++.+ .||||+|++++++++
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~--~DiwSlG~il~ellt 224 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYT--VDIFSAGCVFYYVIS 224 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTH--HHHHHHHHHHHHHHT
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcH--HHHHHHHHHHHHHHc
Confidence 98765332 22334579999999999874 333334 499999999998665
No 285
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=7.5e-32 Score=282.88 Aligned_cols=199 Identities=24% Similarity=0.292 Sum_probs=143.1
Q ss_pred hhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHH-HHhcCCCCceeeeeeeeeeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEAR-VLSTVRHRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~ 525 (701)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .....++..|+. +++.++||||+++++++.+.+..+
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 357899999999999999999966 4789999999986542 223345556665 778889999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcC--CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 526 FIYEYMERGSLFYVLRDD--DEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
+||||+++ +|.+++... .....+++..+..++.|++.||.|||++. ||+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99999986 888777631 11225899999999999999999999742 89999999999999999999999999998
Q ss_pred ccccCCCCceeecccccccCCCCCC----CCcCChhhHHHHHHHHHHHHHcccCC
Q 041034 604 LLHVDSSNRTLRAGTYGYIAPDQRL----SPPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 604 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
...... ......||+.|+|||.+. +..++.+ .||||+|+++++++.+.
T Consensus 175 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--~Di~slG~il~~l~~g~ 226 (327)
T 3aln_A 175 QLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVR--SDVWSLGITLYELATGR 226 (327)
T ss_dssp C-------------------------------CCSH--HHHHHHHHHHHHHHHSC
T ss_pred eccccc-ccccCCCCccccCceeeccccCcCCCCch--hhHHHHHHHHHHHHHCC
Confidence 764332 223347999999999983 4445555 49999999999755543
No 286
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=284.98 Aligned_cols=191 Identities=27% Similarity=0.383 Sum_probs=159.2
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE----
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC---- 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 523 (701)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 47899999999999999999965 469999999997644 234456788999999999999999999999987653
Q ss_pred --EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 524 --MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 524 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
.++||||++ ++|.+++.. .+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 599999997 488877643 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSK 654 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~ 654 (701)
++..... .....+|+.|+|||.+.+ ..++.+. ||||+|+++++++.+.
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~--Di~slG~il~el~~g~ 221 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTV--DIWSVGCIMAEMLTGK 221 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTH--HHHHHHHHHHHHHHSS
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchh--hHHHHHHHHHHHHhCC
Confidence 9865422 334578999999998876 4555554 9999999999877654
No 287
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=1.4e-31 Score=285.80 Aligned_cols=192 Identities=27% Similarity=0.387 Sum_probs=160.5
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEE---
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCM--- 524 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 524 (701)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 57899999999999999999955 4689999999976543 344567889999999999999999999999876654
Q ss_pred ---EEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 525 ---FFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 525 ---~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+|||+
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588888743 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCC
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKP 655 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P 655 (701)
++..... .....||+.|+|||.+.+ ..++.+. ||||+|+++++++.+.+
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwslG~il~el~~g~~ 240 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTV--DIWSVGCIMAEMLTGKT 240 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTH--HHHHHHHHHHHHHHSSC
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHH--hHHHHHHHHHHHHhCCC
Confidence 9865432 334578999999998876 5566655 99999999998777653
No 288
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=6.5e-36 Score=329.35 Aligned_cols=349 Identities=21% Similarity=0.175 Sum_probs=272.5
Q ss_pred CCEEEEEecccccccccCCcccCCCCCCcEEECCCCccee----eCCcccCCCCCCCEEECcCCcCcccCCccc-CCCC-
Q 041034 37 GSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSG----SIPPQIGSLSNLKYLNLRWNNLTGTIPKEI-GSLR- 110 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~- 110 (701)
.++++|+++++.++.......+..+++|++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3578899998888754333336778999999999999875 456778888999999999999986544433 3455
Q ss_pred ---CCCEEECCCCCCCC----CCccccCCccccceeecccccCCCCCccccc-----CCCCCcEEEceecccCCCc----
Q 041034 111 ---NLEVLYLSNNSLHG----TTPIEIGSLRNLEELYLRSNKLSGVLPQEIG-----NLKSLIWLSVMYNTVGGPI---- 174 (701)
Q Consensus 111 ---~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~---- 174 (701)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|.+++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 79999999999984 4578889999999999999998765444333 3568999999999998754
Q ss_pred CcccccccccceeEeeecccCCCCCCCCC-----CccccCccccccccccCC----ccccccCCCcccEEEeccCCCCCC
Q 041034 175 PSTLFRLTNLERLFLGCNQFNGTIPREIG-----NLKNLTHLSIITNKLTGA----IPSTLGHLTSLLYLDLSFNQLHSF 245 (701)
Q Consensus 175 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~l~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~ 245 (701)
+..+..+++|++|++++|.++...+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|.+++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 55667789999999999998765444443 256899999999999874 577788889999999999998764
Q ss_pred C-----CcccCCCCcccEEEcCCCCCccc----cCcccCCCCCCcEEEccCccCCCCCcccccCc-----cceeeecCCC
Q 041034 246 I-----PLEIGNFSALAELDLSDNKIRGI----IPDELSKLSNLQYLNLSSNLLSGQIPFAIGKL-----FNLVSLDLSK 311 (701)
Q Consensus 246 ~-----~~~~~~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~ 311 (701)
. +..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++..+..+... ++|+.|+|++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 2 23334688999999999999865 56777889999999999999976555444432 6899999999
Q ss_pred CcCCCC----CCCcccCCCCCCeeeccCCccCCCCCccccc-----cccCCeEEcccccCcc----cCCCCc----cccc
Q 041034 312 NKLSGS----FPTGIGNCTELQHLALNHNSLDGTIPPEIGK-----ILLLQNLDLSHNNLSG----TIPMTL----HPMF 374 (701)
Q Consensus 312 N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~l~ls~N~l~g----~~p~~~----~~~~ 374 (701)
|.+++. +|..+..+++|+.|+|++|++++..+..+.. .++|+.|++++|++++ .+|..+ ....
T Consensus 323 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~ 402 (461)
T 1z7x_W 323 CSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRE 402 (461)
T ss_dssp SCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCE
T ss_pred CCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccE
Confidence 999865 5666777899999999999998665555543 6789999999999986 566543 2357
Q ss_pred cccccCCCCCc
Q 041034 375 LDMSFNNLEGE 385 (701)
Q Consensus 375 l~ls~N~l~g~ 385 (701)
+|+++|++++.
T Consensus 403 L~l~~N~i~~~ 413 (461)
T 1z7x_W 403 LDLSNNCLGDA 413 (461)
T ss_dssp EECCSSSCCHH
T ss_pred EECCCCCCCHH
Confidence 89999998753
No 289
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=2.1e-31 Score=282.70 Aligned_cols=194 Identities=24% Similarity=0.345 Sum_probs=163.3
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CC-cEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCc------eeeeeeeeee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DG-KVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN------IVKLYGFCLH 520 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~ 520 (701)
.++|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|+.+++.++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 578999999999999999999653 44 68999999753 233567888999999987655 8999999999
Q ss_pred CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEE------------
Q 041034 521 KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILL------------ 588 (701)
Q Consensus 521 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll------------ 588 (701)
.+..++||||+ ++++.+++..... ..+++..+..++.||+.||+|||++ ||+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 5577777765432 2589999999999999999999999 99999999999999
Q ss_pred -------cCCCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 589 -------NSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 589 -------~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.+. ||||+|+++++++.+.+.
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~g~~p 238 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPC--DVWSIGCILFEYYRGFTL 238 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCcc--chHHHHHHHHHHHhCCCC
Confidence 56789999999999865322 2345799999999999888877765 999999999998887643
No 290
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=5e-32 Score=293.86 Aligned_cols=195 Identities=25% Similarity=0.359 Sum_probs=157.9
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC------
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK------ 521 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 521 (701)
..+|++.+.||+|+||.||+|... +++.||||++..... ...+|+++++.++||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 346899999999999999999664 699999999876432 234699999999999999999988542
Q ss_pred cEEEEEEEccCCCCHHHHHhcC-CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC-CCeEEEee
Q 041034 522 RCMFFIYEYMERGSLFYVLRDD-DEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN-LEAFVADF 599 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~-~~~kL~DF 599 (701)
...++||||+++ ++.+.+... .....+++..+..++.||+.||+|||++ ||+||||||+|||++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 246799999986 676665431 1123689999999999999999999998 99999999999999965 56899999
Q ss_pred cCccccccCCCCceeecccccccCCCCCCCC-cCChhhHHHHHHHHHHHHHcccCCCCC
Q 041034 600 GTARLLHVDSSNRTLRAGTYGYIAPDQRLSP-PVNQKIIQDIILVSTTALACLRSKPKS 657 (701)
Q Consensus 600 Gla~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~Di~slg~i~~~cl~~~P~~ 657 (701)
|+|+.+.... ......||+.|+|||++.+. .++.+. ||||+|+++|+|+.+.|..
T Consensus 202 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~--DiwSlG~il~ell~G~~pf 257 (420)
T 1j1b_A 202 GSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSI--DVWSAGCVLAELLLGQPIF 257 (420)
T ss_dssp TTCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHH--HHHHHHHHHHHHHHSSCSS
T ss_pred hhhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchh--hhHHHHHHHHHHHhCCCCC
Confidence 9998764332 23345789999999998664 455554 9999999999999887543
No 291
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=3.2e-34 Score=316.68 Aligned_cols=239 Identities=25% Similarity=0.263 Sum_probs=160.7
Q ss_pred cCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCc
Q 041034 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161 (701)
Q Consensus 82 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 161 (701)
...+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~---------- 97 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV---------- 97 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE----------
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC----------
Confidence 3344477777777777777767777777777777777777776554 6667777777777776653321
Q ss_pred EEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCC
Q 041034 162 WLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQ 241 (701)
Q Consensus 162 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 241 (701)
.++|+.|+|++|.+++..+.. +++|++|+|++|.+++..|..++.+++|++|+|++|.
T Consensus 98 -------------------~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 155 (487)
T 3oja_A 98 -------------------GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNE 155 (487)
T ss_dssp -------------------CTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSC
T ss_pred -------------------CCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCC
Confidence 145555555555555443332 3456666666666666666666667777777777777
Q ss_pred CCCCCCcccC-CCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCC
Q 041034 242 LHSFIPLEIG-NFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPT 320 (701)
Q Consensus 242 l~~~~~~~~~-~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 320 (701)
+++.+|..+. .+++|+.|+|++|.|++..+ +..+++|+.|+|++|.+++..| .+..+++|+.|+|++|.|++ +|.
T Consensus 156 l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 156 IDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp CCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECT
T ss_pred CCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cch
Confidence 7776666654 56777777777777775532 3347777777777777775433 47777777777777777774 666
Q ss_pred cccCCCCCCeeeccCCccC-CCCCccccccccCCeEEcc
Q 041034 321 GIGNCTELQHLALNHNSLD-GTIPPEIGKILLLQNLDLS 358 (701)
Q Consensus 321 ~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~ls 358 (701)
.+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 232 ~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred hhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 7777778888888888877 5666777777777777665
No 292
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.2e-31 Score=308.71 Aligned_cols=183 Identities=28% Similarity=0.404 Sum_probs=155.2
Q ss_pred hcCCccceEEeeccceEEEEEEcC--CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcE---
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP--DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRC--- 523 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 523 (701)
.++|++.+.||+|+||.||+|.+. +++.||||++.... .....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 478999999999999999999664 68999999987543 33445778999999999999999999999987654
Q ss_pred --EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecC
Q 041034 524 --MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGT 601 (701)
Q Consensus 524 --~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGl 601 (701)
.|+||||+++++|.+++.. .+++..++.++.||+.||.|||++ ||+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999987754 489999999999999999999999 99999999999999875 999999999
Q ss_pred ccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 602 ARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 602 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
++..... ....||+.|+|||++.+.. +. .+||||+|+++++
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~--~sDi~slG~~l~~ 268 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTGP-TV--ATDIYTVGRTLAA 268 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHCS-CH--HHHHHHHHHHHHH
T ss_pred chhcccC----CccCCCccccCHHHHcCCC-CC--ceehhhhHHHHHH
Confidence 9876432 3457999999999886654 33 4599999999985
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=2e-32 Score=288.34 Aligned_cols=192 Identities=17% Similarity=0.170 Sum_probs=155.3
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCcc-----ChHHHHHHHHHHHHHhcCC---------------
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETE-----DSAFVESFQNEARVLSTVR--------------- 507 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~--------------- 507 (701)
..++|++.+.||+|+||+||+|+. +|+.||||++...... .....+.+.+|+.+++.++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 357899999999999999999987 6899999999865421 1223467888999888886
Q ss_pred -----------CCceeeeeeeeee-------------CcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHH
Q 041034 508 -----------HRNIVKLYGFCLH-------------KRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAH 563 (701)
Q Consensus 508 -----------h~niv~l~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~ 563 (701)
||||+++++++.+ .+..|+||||+++|++.+.+.+. .+++..+..++.||+.
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~----~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK----LSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT----CCCHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc----CCCHHHHHHHHHHHHH
Confidence 5555555555554 67899999999999776666442 4899999999999999
Q ss_pred HHHHHh-cCCCCCeEecCCCCCcEEEcCCC--------------------CeEEEeecCccccccCCCCceeeccccccc
Q 041034 564 ALSYLH-HDCTPSIVHRDISSNNILLNSNL--------------------EAFVADFGTARLLHVDSSNRTLRAGTYGYI 622 (701)
Q Consensus 564 ~L~~LH-~~~~~givH~Dlkp~NIll~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~gt~~y~ 622 (701)
||+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~ 244 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSM 244 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeeccc
Confidence 999999 88 999999999999999887 8999999999876432 347999999
Q ss_pred CCCCCCCCcCChhhHHHHHHHHHH-HHHcccCCC
Q 041034 623 APDQRLSPPVNQKIIQDIILVSTT-ALACLRSKP 655 (701)
Q Consensus 623 aPE~~~~~~~~~~~~~Di~slg~i-~~~cl~~~P 655 (701)
|||++.+.. +.+ .||||++.+ .+++|.+.+
T Consensus 245 aPE~~~g~~-~~~--~Diwsl~~~~~~~~~~g~~ 275 (336)
T 2vuw_A 245 DEDLFTGDG-DYQ--FDIYRLMKKENNNRWGEYH 275 (336)
T ss_dssp CSGGGCCCS-SHH--HHHHHHHHHHHTTCTTSCC
T ss_pred ChhhhcCCC-ccc--eehhhhhCCCCcccccccC
Confidence 999998766 444 599998776 666776654
No 294
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=3.1e-31 Score=282.07 Aligned_cols=203 Identities=21% Similarity=0.280 Sum_probs=153.1
Q ss_pred HHHHhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeC
Q 041034 443 EDLINATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHK 521 (701)
Q Consensus 443 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 521 (701)
.......++|++.+.||+|+||.||+|.. .+++.||||++....... ....+|+..++.++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR----NRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC----CHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc----HHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 34456678999999999999999999966 468999999987654332 3456778888889999999999998653
Q ss_pred c-------EEEEEEEccCCCCHHHHHhc-CCCccCCCHHHHHHHHHHHHHHHHHHh--cCCCCCeEecCCCCCcEEEcC-
Q 041034 522 R-------CMFFIYEYMERGSLFYVLRD-DDEAIELNWTRRVNIVKSVAHALSYLH--HDCTPSIVHRDISSNNILLNS- 590 (701)
Q Consensus 522 ~-------~~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~givH~Dlkp~NIll~~- 590 (701)
+ ..++||||+++ ++.+.+.. ......+++..+..++.|++.||.||| ++ ||+||||||+||+++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 3 38899999987 55544432 122236889999999999999999999 77 9999999999999996
Q ss_pred CCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCc-CChhhHHHHHHHHHHHHHcccCCCC
Q 041034 591 NLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPP-VNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 591 ~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
++.+||+|||+|+...... ......||+.|+|||++.+.. ++.+. ||||+|+++++++.+.+.
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~--Di~slG~il~ell~g~~p 231 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAV--DIWSVGCIFAEMMLGEPI 231 (360)
T ss_dssp TTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHH--HHHHHHHHHHHHHHSSCS
T ss_pred CCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHH--HHHHHHHHHHHHHhCCCC
Confidence 8999999999998765433 233457899999999886554 55554 999999999999888744
No 295
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=279.20 Aligned_cols=196 Identities=21% Similarity=0.317 Sum_probs=143.9
Q ss_pred hhcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 526 (701)
..++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.++..+++.++||||+++++++.+.+..++
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 4578999999999999999999664 7899999999865432 2223444555667888899999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhc-CCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHH-DCTPSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
||||+ ++.+..+..... ..+++..+..++.|++.||+|||+ . |++||||||+||+++.++.+||+|||+++..
T Consensus 102 v~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 556666654322 258999999999999999999998 5 8999999999999999999999999999776
Q ss_pred ccCCCCceeecccccccCCCCCC-----CCcCChhhHHHHHHHHHHHHHcccC
Q 041034 606 HVDSSNRTLRAGTYGYIAPDQRL-----SPPVNQKIIQDIILVSTTALACLRS 653 (701)
Q Consensus 606 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~~Di~slg~i~~~cl~~ 653 (701)
.... ......||+.|+|||.+. ...++.+ .||||+|+++++++.+
T Consensus 176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~--~Di~slG~il~~l~~g 225 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIR--ADVWSLGISLVELATG 225 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTH--HHHHHHHHHHHHHHHS
T ss_pred cCCc-cccccCCCccccChhhcccccccccCCccc--cchhhHHHHHHHHHhC
Confidence 4332 233456999999999985 3344444 4999999999964443
No 296
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=3.2e-31 Score=272.34 Aligned_cols=237 Identities=25% Similarity=0.248 Sum_probs=123.1
Q ss_pred CCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCC-CCCCCccccCCcccccee
Q 041034 61 FPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNS-LHGTTPIEIGSLRNLEEL 139 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L 139 (701)
.++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+ ++...+..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3556666666666665555556666666666666666665555566666666666666664 554445555555555555
Q ss_pred ecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCcccccccccc
Q 041034 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLT 219 (701)
Q Consensus 140 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 219 (701)
+|++|++++..|..|.++++|+ +|+|++|++++..+..++.+++|++|+|++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~------------------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQ------------------------YLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCC------------------------EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCC------------------------EEECCCCcccccCHhHhccCCCccEEECCCCccc
Confidence 5555555544444444444444 4444444444333334444444555555555544
Q ss_pred CCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCccccc
Q 041034 220 GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIG 299 (701)
Q Consensus 220 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 299 (701)
+..+..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|++++|.+....+.. .
T Consensus 167 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~ 245 (285)
T 1ozn_A 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-P 245 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-H
T ss_pred ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-H
Confidence 443444555555555555555555544555555555555555555555444444555555555555555554332211 1
Q ss_pred CccceeeecCCCCcCCCCCCCcc
Q 041034 300 KLFNLVSLDLSKNKLSGSFPTGI 322 (701)
Q Consensus 300 ~l~~L~~L~Ls~N~l~~~~p~~~ 322 (701)
-+..++.+..+.|.+....|..+
T Consensus 246 ~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 246 LWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHHhcccccCccccCCchHh
Confidence 11223344444444444444433
No 297
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=1.8e-31 Score=285.27 Aligned_cols=195 Identities=22% Similarity=0.356 Sum_probs=163.6
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-----------CCceeeeee
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-----------HRNIVKLYG 516 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~ 516 (701)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.++++++ ||||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 46899999999999999999965 578999999997532 33467888999998886 899999999
Q ss_pred eeeeCc----EEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc---
Q 041034 517 FCLHKR----CMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN--- 589 (701)
Q Consensus 517 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~--- 589 (701)
++...+ ..++||||+ +++|.+++...... .+++..+..++.||+.||+|||+++ ||+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhhcc-CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 998654 789999999 88999999864332 5899999999999999999999853 899999999999994
Q ss_pred ---CCCCeEEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 590 ---SNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 590 ---~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
..+.+||+|||+|+..... .....||+.|+|||++.+..++.+. ||||+|+++|+++++.+.
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~--Di~slG~il~el~~g~~p 234 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGA--DIWSTACLIFELITGDFL 234 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHH--HHHHHHHHHHHHHHSSCC
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchH--hHHHHHHHHHHHHhCCCC
Confidence 3458999999999876432 2334799999999999888777665 999999999988877643
No 298
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.2e-30 Score=273.21 Aligned_cols=234 Identities=23% Similarity=0.233 Sum_probs=158.7
Q ss_pred CCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEE
Q 041034 85 LSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLS 164 (701)
Q Consensus 85 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 164 (701)
.+++++|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 578899999999998 67777888999999999999988 77888888888888888888888 5677777777777777
Q ss_pred ceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCC
Q 041034 165 VMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHS 244 (701)
Q Consensus 165 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 244 (701)
|++|.+.+.+|..+... ..+..+.++++|++|+|++|+++ .+|..+..+++|++|+|++|++++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 77776666666554431 11223455666777777777666 556666666666666666666665
Q ss_pred CCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccC
Q 041034 245 FIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGN 324 (701)
Q Consensus 245 ~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 324 (701)
+|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+++
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 4445666666666666666666666666666666666666666665555555555555555555555555555555555
Q ss_pred CCCCCeeeccCCcc
Q 041034 325 CTELQHLALNHNSL 338 (701)
Q Consensus 325 l~~L~~L~L~~N~l 338 (701)
+++|+.+++..|.+
T Consensus 300 L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 300 LPANCIILVPPHLQ 313 (328)
T ss_dssp SCTTCEEECCGGGS
T ss_pred ccCceEEeCCHHHH
Confidence 55555555555444
No 299
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=2e-31 Score=290.38 Aligned_cols=193 Identities=21% Similarity=0.307 Sum_probs=149.3
Q ss_pred cCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEEEE
Q 041034 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFFIY 528 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 528 (701)
+.|.+.+.||+|+||+||.+...+|+.||||++.... .+.+.+|+.+++++ +||||+++++++.+.+..++||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 3455678899999999987766679999999986532 35678899999876 8999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCcc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCC-------------
Q 041034 529 EYMERGSLFYVLRDDDEAI----ELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSN------------- 591 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~------------- 591 (701)
||+. |+|.+++....... ..++..+..++.||+.||+|||++ ||+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 59999998653211 113335678999999999999999 99999999999999754
Q ss_pred CCeEEEeecCccccccCCCC----ceeecccccccCCCCCCC-------CcCChhhHHHHHHHHHHHHHccc-CC
Q 041034 592 LEAFVADFGTARLLHVDSSN----RTLRAGTYGYIAPDQRLS-------PPVNQKIIQDIILVSTTALACLR-SK 654 (701)
Q Consensus 592 ~~~kL~DFGla~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~~~~Di~slg~i~~~cl~-~~ 654 (701)
+.+||+|||+|+........ .....||+.|+|||++.+ ..++.+ .||||+|++++++++ +.
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--~DiwSlG~il~ellt~g~ 237 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRS--IDIFSMGCVFYYILSKGK 237 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTH--HHHHHHHHHHHHHHTTSC
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchh--hhhHhHHHHHHHHHhCCC
Confidence 48999999999877543221 234579999999998865 344444 499999999999887 44
No 300
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.8e-31 Score=272.79 Aligned_cols=224 Identities=25% Similarity=0.244 Sum_probs=124.2
Q ss_pred cEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccc
Q 041034 65 QYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144 (701)
Q Consensus 65 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 144 (701)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 35566666655 334322 245666666666665555555555555555555555555544444555555555555444
Q ss_pred c-CCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcc
Q 041034 145 K-LSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 145 ~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 223 (701)
. +. ...|..+..+++|++|++++|++++..|..+.++++|++|++++|++++..+
T Consensus 91 ~~l~------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLR------------------------SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TTCC------------------------CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcc------------------------ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCH
Confidence 3 33 3333444455555556666666655555566666666666666666665555
Q ss_pred ccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccc
Q 041034 224 STLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFN 303 (701)
Q Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 303 (701)
..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 55666666666666666666544445555556666666666655555555555555555555555555444444555555
Q ss_pred eeeecCCCCcCC
Q 041034 304 LVSLDLSKNKLS 315 (701)
Q Consensus 304 L~~L~Ls~N~l~ 315 (701)
|+.|+|++|.+.
T Consensus 227 L~~L~l~~N~~~ 238 (285)
T 1ozn_A 227 LQYLRLNDNPWV 238 (285)
T ss_dssp CCEEECCSSCEE
T ss_pred cCEEeccCCCcc
Confidence 555555555444
No 301
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=2e-30 Score=266.23 Aligned_cols=187 Identities=13% Similarity=0.115 Sum_probs=159.6
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
.++|++.+.||+|+||.||+|... +++.||||++......+....+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999664 5899999999887666666678899999999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.++++.. ....++.+++.|++.||+|||++ ||+||||||+||+++.++.+||+++|.
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~------ 175 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPAT------ 175 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccc------
Confidence 9999999999999542 34567889999999999999999 999999999999999999999985543
Q ss_pred CCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH--------------------------------------
Q 041034 608 DSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA-------------------------------------- 649 (701)
Q Consensus 608 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~-------------------------------------- 649 (701)
++| ++.+ .||||+|+++|+
T Consensus 176 --------------~~~-------~~~~--~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T 3uqc_A 176 --------------MPD-------ANPQ--DDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDI 232 (286)
T ss_dssp --------------CTT-------CCHH--HHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTS
T ss_pred --------------cCC-------CCch--hHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCC
Confidence 222 3333 388888888774
Q ss_pred ----------cccCCCCCCCCHHHHHHHhhcCCC
Q 041034 650 ----------CLRSKPKSRPTMQRISQELEGKTP 673 (701)
Q Consensus 650 ----------cl~~~P~~Rpt~~~i~~~l~~~~~ 673 (701)
||+.||.+| |+.|+++.|++...
T Consensus 233 ~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 233 PFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp CHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 788888888 88888888876543
No 302
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=5.8e-31 Score=274.96 Aligned_cols=195 Identities=25% Similarity=0.345 Sum_probs=156.8
Q ss_pred hcCCccceEEeeccceEEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeee--------
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL-------- 519 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-------- 519 (701)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS---HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC---hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 578999999999999999999665 58999999987543 344678899999999999999999998873
Q ss_pred ------eCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc-CCC
Q 041034 520 ------HKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN-SNL 592 (701)
Q Consensus 520 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~-~~~ 592 (701)
+....++||||++ |+|.+++... .+++..+..++.|++.||+|||++ ||+||||||+||+++ +++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 5999998653 488999999999999999999999 999999999999997 567
Q ss_pred CeEEEeecCccccccCC---CCceeecccccccCCCCCCC-CcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 593 EAFVADFGTARLLHVDS---SNRTLRAGTYGYIAPDQRLS-PPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 593 ~~kL~DFGla~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
.+||+|||+++...... .......+|+.|+|||.+.+ ..++.+. ||||+|+++++++.+.+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~--Di~slG~il~el~~g~~p 224 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI--DMWAAGCIFAEMLTGKTL 224 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHH--HHHHHHHHHHHHHHSSCS
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchh--hhHhHHHHHHHHHhCCCC
Confidence 99999999998764321 12233457999999998765 4455554 999999999999988743
No 303
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.1e-30 Score=283.04 Aligned_cols=246 Identities=27% Similarity=0.266 Sum_probs=114.3
Q ss_pred cEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccc
Q 041034 65 QYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN 144 (701)
Q Consensus 65 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 144 (701)
+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 44555555544 3343332 35555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeec-ccCCCCCCCCCCccccCccccccccccCCcc
Q 041034 145 KLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCN-QFNGTIPREIGNLKNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 145 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 223 (701)
++++..+..|.++++|++|+|++|.++...+..|.++++|+.|+|++| .+....+..|.++++|++|+|++|+++
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~---- 209 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK---- 209 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS----
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc----
Confidence 555444444555555555555555544444444444444444444442 222222223444444444444444443
Q ss_pred ccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccc
Q 041034 224 STLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFN 303 (701)
Q Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 303 (701)
+. | .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..|..+++
T Consensus 210 --------------------~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 210 --------------------DM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp --------------------SC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred --------------------cc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 31 1 2333444444444444444444444444444444444444444444444444444
Q ss_pred eeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccC
Q 041034 304 LVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLD 339 (701)
Q Consensus 304 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 339 (701)
|+.|+|++|+|++..+..+..+++|+.|+|++|.+.
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 444444444444333334444444444444444443
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=4e-30 Score=281.09 Aligned_cols=106 Identities=25% Similarity=0.273 Sum_probs=50.7
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 34455555555555444444555555555555555554444444555555555555555554444444444444444444
Q ss_pred ccccCCCCCcccccCCCCCcEEEcee
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMY 167 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~ 167 (701)
++|+++...+..|.++++|+.|+|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~ 169 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGE 169 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCC
T ss_pred CCCcccccCHHHhhhCcccCEeCCCC
Confidence 44444444333444444444444443
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=3.3e-30 Score=281.77 Aligned_cols=248 Identities=24% Similarity=0.297 Sum_probs=173.7
Q ss_pred CCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEce
Q 041034 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVM 166 (701)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 166 (701)
....++.++++++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4568888888888 5666554 688999999999988888888899999999999999888878888888888888888
Q ss_pred ecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccc-cccCCccccccCCCcccEEEeccCCCCCC
Q 041034 167 YNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITN-KLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245 (701)
Q Consensus 167 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 245 (701)
+|.++...+..|..+++|++|+|++|+++...+..|.++++|++|+|++| .+....+..|.++++|++|+|++|+++.
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE- 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-
Confidence 88887776667777777777777777777666667777777777777763 3443334456666777777777776665
Q ss_pred CCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCC
Q 041034 246 IPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNC 325 (701)
Q Consensus 246 ~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 325 (701)
+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 33 35566666666666666666666666666666666666666665555555556666666666666655444455555
Q ss_pred CCCCeeeccCCccC
Q 041034 326 TELQHLALNHNSLD 339 (701)
Q Consensus 326 ~~L~~L~L~~N~l~ 339 (701)
++|+.|+|++|.+.
T Consensus 279 ~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 279 HHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECCSSCEE
T ss_pred cCCCEEEcCCCCcc
Confidence 55555555555544
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.4e-30 Score=282.72 Aligned_cols=254 Identities=22% Similarity=0.220 Sum_probs=197.7
Q ss_pred CCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEce
Q 041034 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVM 166 (701)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 166 (701)
....++.+++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~------- 124 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLAS------- 124 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT-------
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCccc-------
Confidence 3567777777777 4555443 57777777777777766767777777777777777766555555555554
Q ss_pred ecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEecc-CCCCCC
Q 041034 167 YNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSF-NQLHSF 245 (701)
Q Consensus 167 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~ 245 (701)
|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++ |.+...
T Consensus 125 -----------------L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i 187 (452)
T 3zyi_A 125 -----------------LNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYI 187 (452)
T ss_dssp -----------------CCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE
T ss_pred -----------------CCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcccc
Confidence 55555555555544445566666666666666666655556677777888888887 445444
Q ss_pred CCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCC
Q 041034 246 IPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNC 325 (701)
Q Consensus 246 ~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 325 (701)
.+..|.++++|+.|+|++|+|++. | .+..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..|..|..+
T Consensus 188 ~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 265 (452)
T 3zyi_A 188 SEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGL 265 (452)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred ChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCC
Confidence 455788999999999999999965 4 58899999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCC
Q 041034 326 TELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMT 369 (701)
Q Consensus 326 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~ 369 (701)
++|+.|+|++|+|++..+..+..+++|+.|+|++|++.+.....
T Consensus 266 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 266 ASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp TTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred CCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 99999999999999888888999999999999999999887654
No 307
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=5.2e-31 Score=295.22 Aligned_cols=200 Identities=25% Similarity=0.343 Sum_probs=169.5
Q ss_pred hcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeeee------C
Q 041034 449 TEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCLH------K 521 (701)
Q Consensus 449 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~ 521 (701)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.++++++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 47899999999999999999965 468999999987643 33446788999999999999999999998765 6
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCC---eEEEe
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLE---AFVAD 598 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~---~kL~D 598 (701)
+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. ||+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 67899999999999999998765544688899999999999999999999 9999999999999997765 89999
Q ss_pred ecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCC
Q 041034 599 FGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPK 656 (701)
Q Consensus 599 FGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~ 656 (701)
||.++...... ......||+.|+|||.+.+..++.+. ||||+|+++|+++.+.+.
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ks--DIwSLGviLyeLltG~~P 222 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTV--DYWSFGTLAFECITGFRP 222 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTH--HHHHHHHHHHHHHSSCSS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchh--HHHHHHHHHHHHHHCCCC
Confidence 99998765332 33445799999999999888887775 999999999998887544
No 308
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=2e-30 Score=278.04 Aligned_cols=213 Identities=22% Similarity=0.310 Sum_probs=173.3
Q ss_pred HHHhhhcCCccceEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CC-----ceeeeee
Q 041034 444 DLINATEDFHIRYCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HR-----NIVKLYG 516 (701)
Q Consensus 444 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~ 516 (701)
+-....++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+.+++.++ |+ +|+++++
T Consensus 48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence 3344578999999999999999999965 46889999999753 233567788888888875 44 5999999
Q ss_pred eeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEc--CCCCe
Q 041034 517 FCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLN--SNLEA 594 (701)
Q Consensus 517 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~--~~~~~ 594 (701)
++...+..++||||+++ +|.+++...... .+++..+..++.|++.||.|||.+ ..||+||||||+|||++ .++.+
T Consensus 124 ~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~ 200 (382)
T 2vx3_A 124 HFMFRNHLCLVFEMLSY-NLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI 200 (382)
T ss_dssp EEEETTEEEEEEECCCC-BHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred eeccCCceEEEEecCCC-CHHHHHhhcCcC-CCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence 99999999999999965 999999865422 589999999999999999999953 23999999999999995 47889
Q ss_pred EEEeecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcccCCCCC-CCCHHHHHHHh
Q 041034 595 FVADFGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACLRSKPKS-RPTMQRISQEL 668 (701)
Q Consensus 595 kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl~~~P~~-Rpt~~~i~~~l 668 (701)
||+|||+|+..... .....||+.|+|||++.+.+++.+. ||||+|+++++++.+.|.. ..+..+.+..+
T Consensus 201 kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~--DiwSlG~il~elltg~~pf~~~~~~~~~~~i 270 (382)
T 2vx3_A 201 KIVDFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAI--DMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270 (382)
T ss_dssp EECCCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHH--HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred EEEeccCceecccc---cccccCCccccChHHHcCCCCCcHH--HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999876432 2345799999999999888887665 9999999999999998544 34444444443
No 309
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=4e-34 Score=315.06 Aligned_cols=329 Identities=21% Similarity=0.185 Sum_probs=266.5
Q ss_pred CCEEEEEeccccccccc---CCcccCCCCCCcEEECCCCcceeeCCccc-CCCC----CCCEEECcCCcCcc----cCCc
Q 041034 37 GSITHIELVECSIKGEL---GSLNFSCFPNLQYLNLWNNNLSGSIPPQI-GSLS----NLKYLNLRWNNLTG----TIPK 104 (701)
Q Consensus 37 ~~v~~l~l~~~~~~~~~---~~~~~~~~~~L~~L~L~~n~l~~~~~~~~-~~l~----~L~~L~L~~n~l~~----~~p~ 104 (701)
.+++.|++++|++++.. -...+..+++|++|+|++|.+....+..+ ..++ +|++|+|++|+++. .+|.
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 107 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS 107 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH
Confidence 46889999999987421 11245678999999999999986544333 3344 79999999999984 5688
Q ss_pred ccCCCCCCCEEECCCCCCCCCCccccC-----CccccceeecccccCCCCC----cccccCCCCCcEEEceecccCCCcC
Q 041034 105 EIGSLRNLEVLYLSNNSLHGTTPIEIG-----SLRNLEELYLRSNKLSGVL----PQEIGNLKSLIWLSVMYNTVGGPIP 175 (701)
Q Consensus 105 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~ 175 (701)
.+..+++|++|+|++|.+++..+..+. ..++|++|+|++|++++.. +..+..+++|++|++++|.++...+
T Consensus 108 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 187 (461)
T 1z7x_W 108 TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGV 187 (461)
T ss_dssp HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHH
Confidence 999999999999999999765444433 3568999999999998743 6677788999999999999876655
Q ss_pred ccccc-----ccccceeEeeecccCCC----CCCCCCCccccCccccccccccCCc-----cccccCCCcccEEEeccCC
Q 041034 176 STLFR-----LTNLERLFLGCNQFNGT----IPREIGNLKNLTHLSIITNKLTGAI-----PSTLGHLTSLLYLDLSFNQ 241 (701)
Q Consensus 176 ~~~~~-----l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~-----p~~l~~l~~L~~L~L~~N~ 241 (701)
..+.. .++|++|+|++|.+++. ++..+..+++|++|++++|.+++.. +..+..+++|++|++++|.
T Consensus 188 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~ 267 (461)
T 1z7x_W 188 RVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG 267 (461)
T ss_dssp HHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCC
Confidence 55543 56999999999999874 4677788899999999999998643 3334468999999999999
Q ss_pred CCCC----CCcccCCCCcccEEEcCCCCCccccCcccCC-----CCCCcEEEccCccCCCC----CcccccCccceeeec
Q 041034 242 LHSF----IPLEIGNFSALAELDLSDNKIRGIIPDELSK-----LSNLQYLNLSSNLLSGQ----IPFAIGKLFNLVSLD 308 (701)
Q Consensus 242 l~~~----~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~-----l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~ 308 (701)
+++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|++++|.+++. ++..+..+++|+.|+
T Consensus 268 l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~ 347 (461)
T 1z7x_W 268 ITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQ 347 (461)
T ss_dssp CCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEE
T ss_pred CCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEE
Confidence 9875 4666777999999999999998765544443 36999999999999876 456677789999999
Q ss_pred CCCCcCCCCCCCcccC-----CCCCCeeeccCCccCC----CCCccccccccCCeEEcccccCccc
Q 041034 309 LSKNKLSGSFPTGIGN-----CTELQHLALNHNSLDG----TIPPEIGKILLLQNLDLSHNNLSGT 365 (701)
Q Consensus 309 Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~l~ls~N~l~g~ 365 (701)
|++|.+++..+..+.. .++|++|+|++|++++ .+|..+..+++|++|++++|++++.
T Consensus 348 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 348 ISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred ccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 9999998765554443 6799999999999986 7888999999999999999999854
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=6.7e-32 Score=281.10 Aligned_cols=248 Identities=23% Similarity=0.237 Sum_probs=139.6
Q ss_pred cCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCC-CCCccccC-------CccccceeecccccCCCCCccc
Q 041034 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLH-GTTPIEIG-------SLRNLEELYLRSNKLSGVLPQE 153 (701)
Q Consensus 82 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~ 153 (701)
++..++|++|++++|.+ .+|..+... |+.|+|++|+++ ..+|..+. .+++|++|+|++|++++..|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34445566666666666 445544432 666666666663 33343333 4566666666666666666655
Q ss_pred c--cCCCCCcEEEceecccCCCcCcccccc-----cccceeEeeecccCCCCCCCCCCccccCccccccccccCC--ccc
Q 041034 154 I--GNLKSLIWLSVMYNTVGGPIPSTLFRL-----TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA--IPS 224 (701)
Q Consensus 154 ~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~p~ 224 (701)
+ ..+++|++|+|++|.+++. |..+..+ ++|++|+|++|++++..|..++.+++|++|+|++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 5666666666666666655 5555555 6666666666666666666666666666666666666543 222
Q ss_pred cc--cCCCcccEEEeccCCCCCC--CC-cccCCCCcccEEEcCCCCCccccC-cccCCCCCCcEEEccCccCCCCCcccc
Q 041034 225 TL--GHLTSLLYLDLSFNQLHSF--IP-LEIGNFSALAELDLSDNKIRGIIP-DELSKLSNLQYLNLSSNLLSGQIPFAI 298 (701)
Q Consensus 225 ~l--~~l~~L~~L~L~~N~l~~~--~~-~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~ 298 (701)
.+ ..+++|++|+|++|+|++. ++ ..+..+++|+.|+|++|+|++..| ..+..+++|+.|+|++|.|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 5566666666666666531 11 222345566666666666665543 33444555666666666555 444444
Q ss_pred cCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccC
Q 041034 299 GKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLD 339 (701)
Q Consensus 299 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 339 (701)
. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 3 4555555555555543 33 555555555555555554
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=6.7e-32 Score=281.09 Aligned_cols=250 Identities=24% Similarity=0.209 Sum_probs=209.3
Q ss_pred ccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCC-CCCccccc-------CCCCCcEEEceecccCCCcCc
Q 041034 105 EIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLS-GVLPQEIG-------NLKSLIWLSVMYNTVGGPIPS 176 (701)
Q Consensus 105 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~ 176 (701)
.++..++|+.|++++|.+ .+|..+... |+.|+|++|+++ ..+|..+. ++++|++|+|++|.+++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 456678899999999999 667666554 999999999994 55666665 789999999999999998888
Q ss_pred cc--ccccccceeEeeecccCCCCCCCCCCc-----cccCccccccccccCCccccccCCCcccEEEeccCCCCCC--CC
Q 041034 177 TL--FRLTNLERLFLGCNQFNGTIPREIGNL-----KNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF--IP 247 (701)
Q Consensus 177 ~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~ 247 (701)
.+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .+
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8899999999999999977 7778777 8999999999999988889999999999999999998774 23
Q ss_pred ccc--CCCCcccEEEcCCCCCccc--cC-cccCCCCCCcEEEccCccCCCCCc-ccccCccceeeecCCCCcCCCCCCCc
Q 041034 248 LEI--GNFSALAELDLSDNKIRGI--IP-DELSKLSNLQYLNLSSNLLSGQIP-FAIGKLFNLVSLDLSKNKLSGSFPTG 321 (701)
Q Consensus 248 ~~~--~~~~~L~~L~L~~N~l~~~--~p-~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~ 321 (701)
..+ ..+++|+.|+|++|+|++. ++ ..+..+++|+.|+|++|.+++.+| ..+..+++|+.|+|++|+|+ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 333 7889999999999999842 22 344678899999999999998775 45666889999999999998 78887
Q ss_pred ccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcc
Q 041034 322 IGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSG 364 (701)
Q Consensus 322 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 364 (701)
+. ++|++|+|++|+|++. |. +..+++|++|++++|++++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 76 8899999999999866 65 8889999999999999875
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=5.3e-32 Score=282.53 Aligned_cols=266 Identities=23% Similarity=0.248 Sum_probs=181.6
Q ss_pred CcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeeccc
Q 041034 64 LQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRS 143 (701)
Q Consensus 64 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 143 (701)
++.++++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4455666666665555555666677777777777776666677777777777777777765443 66666666666666
Q ss_pred ccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcc
Q 041034 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 144 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 223 (701)
|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..|
T Consensus 90 n~l~~l~-----------------------------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 90 NYVQELL-----------------------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp SEEEEEE-----------------------------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGG
T ss_pred Ccccccc-----------------------------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccc
Confidence 6665321 1245555555555555443332 3456667777777776666
Q ss_pred ccccCCCcccEEEeccCCCCCCCCcccC-CCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCcc
Q 041034 224 STLGHLTSLLYLDLSFNQLHSFIPLEIG-NFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLF 302 (701)
Q Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 302 (701)
..+..+++|++|+|++|.+++..+..+. .+++|+.|+|++|.|++.. ....+++|+.|+|++|.+++. |..+..++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~ 214 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcc-hhhhcccC
Confidence 6677777777777777777776555553 5677778888888777552 233477888888888888754 44577788
Q ss_pred ceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccC-CCCCccccccccCCeEEcccc-cCcccCC
Q 041034 303 NLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLD-GTIPPEIGKILLLQNLDLSHN-NLSGTIP 367 (701)
Q Consensus 303 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~ls~N-~l~g~~p 367 (701)
+|+.|+|++|+++ .+|..+..+++|+.|+|++|++. +.+|..+..+++|+.|++++| .++|..|
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 8888888888887 56777888888888888888888 677788888888888888844 4555444
No 313
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=1.4e-29 Score=261.93 Aligned_cols=165 Identities=23% Similarity=0.389 Sum_probs=138.8
Q ss_pred hcCCccc-eEEeeccceEEEEEEc-CCCcEEEEEEecCCCccChHHHHHHHHHHHHH-hcCCCCceeeeeeeeee----C
Q 041034 449 TEDFHIR-YCIGTGGYGSVYKAEL-PDGKVVALKKLHQSETEDSAFVESFQNEARVL-STVRHRNIVKLYGFCLH----K 521 (701)
Q Consensus 449 ~~~y~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~ 521 (701)
.++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|+.++ +..+||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4667777 7899999999999965 57899999999642 4567788887 66689999999999887 6
Q ss_pred cEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC---CCCeEEEe
Q 041034 522 RCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS---NLEAFVAD 598 (701)
Q Consensus 522 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~---~~~~kL~D 598 (701)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 789999999999999999987542 2589999999999999999999999 9999999999999998 78999999
Q ss_pred ecCccccccCCCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 599 FGTARLLHVDSSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 599 FGla~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
||+|..... ..++.+ .||||+|+++++
T Consensus 164 fg~a~~~~~----------------------~~~~~~--~DiwslG~il~e 190 (299)
T 3m2w_A 164 FGFAKETTG----------------------EKYDKS--CDMWSLGVIMYI 190 (299)
T ss_dssp CTTCEECTT----------------------CGGGGH--HHHHHHHHHHHH
T ss_pred ccccccccc----------------------ccCCch--hhHHHHHHHHHH
Confidence 999975421 123333 488888888885
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=5e-32 Score=282.71 Aligned_cols=267 Identities=22% Similarity=0.182 Sum_probs=187.5
Q ss_pred CEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEEC
Q 041034 38 SITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYL 117 (701)
Q Consensus 38 ~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 117 (701)
++...+++.+.+...+. ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|
T Consensus 11 ~l~i~~ls~~~l~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALA-SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHH-HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHH-HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 34445556665543222 235667899999999999998888899999999999999999997765 999999999999
Q ss_pred CCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCC
Q 041034 118 SNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGT 197 (701)
Q Consensus 118 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 197 (701)
++|++++.. ..++|++|++++|++++..+.. +++|++|++++|.+++..+..+..+++|++|+|++|++++.
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 999998543 3489999999999998765543 46677888888888777777777777777777777777766
Q ss_pred CCCCC-CCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCC
Q 041034 198 IPREI-GNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSK 276 (701)
Q Consensus 198 ~~~~~-~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~ 276 (701)
.+..+ ..+++|++|+|++|.+++. |. ...+++|++|+|++|++++. |..+..+++|+.|+|++|+|+ .+|..+..
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~ 235 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRF 235 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCC
T ss_pred cHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhc
Confidence 55555 3566677777777776644 22 22366666666666666653 334666666666666666666 34555666
Q ss_pred CCCCcEEEccCccCC-CCCcccccCccceeeecCCC-CcCCCCCC
Q 041034 277 LSNLQYLNLSSNLLS-GQIPFAIGKLFNLVSLDLSK-NKLSGSFP 319 (701)
Q Consensus 277 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p 319 (701)
+++|+.|++++|.++ +.+|..+..+++|+.|++++ +.++|..|
T Consensus 236 l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 666666666666666 45555556666666666652 33444333
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=3e-29 Score=282.59 Aligned_cols=264 Identities=28% Similarity=0.310 Sum_probs=186.7
Q ss_pred CcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeeccc
Q 041034 64 LQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRS 143 (701)
Q Consensus 64 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 143 (701)
++.|++++|+++ .+|..+. ++|++|+|++|.|+. +|. .+++|++|+|++|++++ +|. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcC
Confidence 556777777776 5555554 677777777777763 443 45677777777777764 332 567777777777
Q ss_pred ccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcc
Q 041034 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 144 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 223 (701)
|++++..+ .+++|+.|++++|.+++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.|++ +|
T Consensus 111 N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 111 NPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC
T ss_pred CcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc
Confidence 77775433 45677777777777765 3332 3678888888888774 343 23567788888888875 44
Q ss_pred ccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccc
Q 041034 224 STLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFN 303 (701)
Q Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 303 (701)
..+++|+.|+|++|+|++ +|.. +++|+.|++++|.|+. +|.. +++|+.|+|++|.|++ +| ..+++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~ 242 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSE 242 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCc
Confidence 446778888888888887 4432 4678888888888874 4432 4778888888888885 45 34578
Q ss_pred eeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCCCcc
Q 041034 304 LVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPMTLH 371 (701)
Q Consensus 304 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~ 371 (701)
|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++|.+|..+.
T Consensus 243 L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 243 LKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp CCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred CcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 888888888888 4665 5678888888888888 7788888888888888888888887776543
No 316
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.7e-30 Score=281.21 Aligned_cols=192 Identities=17% Similarity=0.172 Sum_probs=144.4
Q ss_pred hhcCCccceEEeeccceEEEEEE-cCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCC-Cceeeee----------
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH-RNIVKLY---------- 515 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~---------- 515 (701)
....|...+.||+|+||.||+|. ..+|+.||||++...........+.+.+|+.+++.++| ++...+.
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 34567888999999999999996 45799999999985544443445778999999999987 3221111
Q ss_pred -----------eeeee-----CcEEEEEEEccCCCCHHHHHhcC----CCccCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 041034 516 -----------GFCLH-----KRCMFFIYEYMERGSLFYVLRDD----DEAIELNWTRRVNIVKSVAHALSYLHHDCTPS 575 (701)
Q Consensus 516 -----------~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~g 575 (701)
.++.. ....+++|+++ +++|.++++.. .....+++..+..++.||+.||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 11111 12357778876 56999988521 1223578889999999999999999999 9
Q ss_pred eEecCCCCCcEEEcCCCCeEEEeecCccccccCCCCceeecccccccCCCCC----------CCCcCChhhHHHHHHHHH
Q 041034 576 IVHRDISSNNILLNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR----------LSPPVNQKIIQDIILVST 645 (701)
Q Consensus 576 ivH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~~~Di~slg~ 645 (701)
|+||||||+|||++.++.+||+|||+|+..... .....| +.|+|||++ ....++.+. ||||+|+
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~--DvwSlGv 305 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAF--DTWTLGL 305 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHH--HHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchh--hHHHHHH
Confidence 999999999999999999999999999875433 334567 999999998 444455554 9999999
Q ss_pred HHHH
Q 041034 646 TALA 649 (701)
Q Consensus 646 i~~~ 649 (701)
++|+
T Consensus 306 il~e 309 (413)
T 3dzo_A 306 AIYW 309 (413)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9995
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.2e-29 Score=283.73 Aligned_cols=283 Identities=25% Similarity=0.301 Sum_probs=235.0
Q ss_pred CCCCCCcceeE--------eCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEEC
Q 041034 22 TSDHCNWVGIT--------CDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNL 93 (701)
Q Consensus 22 ~~d~c~w~gv~--------c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 93 (701)
+.++|.|.|.. |. ...++.|++++++++ .++... .++|+.|+|++|.|+ .+|. .+++|++|+|
T Consensus 18 ~~~~~~~~~r~~~~~~~~~c~-~~~l~~L~ls~n~L~-~lp~~l---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L 88 (622)
T 3g06_A 18 AAPAEESRGRAAVVQKMRACL-NNGNAVLNVGESGLT-TLPDCL---PAHITTLVIPDNNLT-SLPA---LPPELRTLEV 88 (622)
T ss_dssp TCCGGGHHHHHHHHHHHHHHH-HHCCCEEECCSSCCS-CCCSCC---CTTCSEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred cCCcchhccccccCccccccc-CCCCcEEEecCCCcC-ccChhh---CCCCcEEEecCCCCC-CCCC---cCCCCCEEEc
Confidence 45789997632 32 235889999999998 455422 289999999999998 4565 5789999999
Q ss_pred cCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCC
Q 041034 94 RWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGP 173 (701)
Q Consensus 94 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 173 (701)
++|+|++ +|. .+++|++|+|++|++++..+ .+++|+.|+|++|+++++ |.. +++|++|+|++|.+++.
T Consensus 89 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~l 156 (622)
T 3g06_A 89 SGNQLTS-LPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLASL 156 (622)
T ss_dssp CSCCCSC-CCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSCC
T ss_pred CCCcCCc-CCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCCc
Confidence 9999995 554 77999999999999996544 678999999999999974 443 48999999999999864
Q ss_pred cCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCC
Q 041034 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNF 253 (701)
Q Consensus 174 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 253 (701)
|. .+++|+.|++++|++++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++. +|. .+
T Consensus 157 -~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~ 220 (622)
T 3g06_A 157 -PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LP 220 (622)
T ss_dssp -CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CC
T ss_pred -CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CC
Confidence 33 34789999999999996 55 456889999999999996 4543 4789999999999997 453 35
Q ss_pred CcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeec
Q 041034 254 SALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLAL 333 (701)
Q Consensus 254 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 333 (701)
++|+.|+|++|+|++ +| ..+++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 899999999999996 55 45689999999999999 4555 5789999999999999 78999999999999999
Q ss_pred cCCccCCCCCccccccc
Q 041034 334 NHNSLDGTIPPEIGKIL 350 (701)
Q Consensus 334 ~~N~l~~~~p~~~~~l~ 350 (701)
++|++++.+|..+..++
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 99999999888887765
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.8e-30 Score=289.18 Aligned_cols=206 Identities=14% Similarity=0.085 Sum_probs=147.3
Q ss_pred EeeccceEEEEE-EcCCCcEEEEEEecCCCcc-------ChHHHHHHHHHHHHHhcC-CCCceeeeeeeeeeCcEEEEEE
Q 041034 458 IGTGGYGSVYKA-ELPDGKVVALKKLHQSETE-------DSAFVESFQNEARVLSTV-RHRNIVKLYGFCLHKRCMFFIY 528 (701)
Q Consensus 458 lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 528 (701)
.+.|+.|.+..+ +.--|+.||+|++...... .....+++.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 456666666655 3335889999999765321 123356799999999999 6999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccC
Q 041034 529 EYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVD 608 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~ 608 (701)
||++|++|.+++.+.. +++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+||+|||+|+....+
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999998765 45554 4899999999999999 9999999999999999999999999999987665
Q ss_pred CCCceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHHcc----------cCCCCCCCCHHHHHHHhhcCCCcc
Q 041034 609 SSNRTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALACL----------RSKPKSRPTMQRISQELEGKTPMK 675 (701)
Q Consensus 609 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~cl----------~~~P~~Rpt~~~i~~~l~~~~~~~ 675 (701)
.......+||+.|+|||++.+.. ... .|+|++|++.+.|+ ...|..++++..+...+....+.+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~~-~~~--~d~~s~g~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~ 466 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAENK-SWN--GFWRSAPVHPFNLPQPWSNWLYAVWQEPVERWNFVLLLALFEKKAKLP 466 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC--------------------CCCCTTHHHHHHHHHTSCGGGCSHHHHHHHHHTGGGSC
T ss_pred CccccCceechhhccHHHhCCCC-CCc--ccccccccchhhhccccchhHHHhhcCCCCCCcHHHHHHHHhCCCCCC
Confidence 55566678999999999997653 333 39999999877654 346777888888888776655443
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=2.1e-30 Score=286.12 Aligned_cols=219 Identities=23% Similarity=0.175 Sum_probs=146.1
Q ss_pred CCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccce
Q 041034 59 SCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138 (701)
Q Consensus 59 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 138 (701)
..+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 345689999999999999888999999999999999999998776 9999999999999999986443 389999
Q ss_pred eecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCC-CccccCcccccccc
Q 041034 139 LYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIG-NLKNLTHLSIITNK 217 (701)
Q Consensus 139 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~ 217 (701)
|+|++|.+++..+.. +++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++.+|..+. .+++|++|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 999999999876543 45666777777776666666666666666666666666655555443 45555555555555
Q ss_pred ccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCC
Q 041034 218 LTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLS 291 (701)
Q Consensus 218 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 291 (701)
|++..+ +..+++|++|+|++|.|++. |..+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.+.
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred cccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 554311 22344555555555555442 2224444444444444444443 3334444444444444444444
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.96 E-value=2.7e-28 Score=248.32 Aligned_cols=218 Identities=26% Similarity=0.326 Sum_probs=128.2
Q ss_pred CCCCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccC
Q 041034 23 SDHCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTI 102 (701)
Q Consensus 23 ~d~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 102 (701)
.|+|.|.|+.|.-.+.++.+++++++++. +|..+. ++|++|+|++|++++..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~--------------------------ip~~~~--~~l~~L~l~~n~l~~~~ 53 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTA--------------------------IPSNIP--ADTKKLDLQSNKLSSLP 53 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSS--------------------------CCSCCC--TTCSEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCc--------------------------cCCCCC--CCCCEEECcCCCCCeeC
Confidence 47999999988644444455555555442 333222 34455555555554444
Q ss_pred CcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCccccccc
Q 041034 103 PKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLT 182 (701)
Q Consensus 103 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 182 (701)
+..|.++++|++|+|++|+++...+..|..+++|++|+|++|++++..+..|.++++|++|++++|.+++..+..|..++
T Consensus 54 ~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 133 (270)
T 2o6q_A 54 SKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLT 133 (270)
T ss_dssp TTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCc
Confidence 44455555555555555555444444444555555555555555544444555555555555555555555555555666
Q ss_pred ccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcC
Q 041034 183 NLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLS 262 (701)
Q Consensus 183 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~ 262 (701)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 66666666666665555556666666777777776666656666677777777777777776555566777777777777
Q ss_pred CCCCcc
Q 041034 263 DNKIRG 268 (701)
Q Consensus 263 ~N~l~~ 268 (701)
+|.+..
T Consensus 214 ~N~~~c 219 (270)
T 2o6q_A 214 ENPWDC 219 (270)
T ss_dssp SSCBCC
T ss_pred CCCeeC
Confidence 777653
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=3.1e-27 Score=241.37 Aligned_cols=206 Identities=26% Similarity=0.287 Sum_probs=116.4
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 45677777777777666666677777777777777776666666667777777777777776666666666666666666
Q ss_pred ccccCCCCCcccccCCCCCcEEEceecccCCC-cCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccC
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGP-IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTG 220 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 220 (701)
++|++++..+..+..+++|++|++++|.+++. +|..+..+++|+ +|++++|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~------------------------~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLE------------------------HLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCC------------------------EEECCSSCCCE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCC------------------------EEECCCCCCCc
Confidence 66666655554555555555555555554432 233444444444 44444444443
Q ss_pred CccccccCCCccc----EEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCC
Q 041034 221 AIPSTLGHLTSLL----YLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSG 292 (701)
Q Consensus 221 ~~p~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 292 (701)
..+..+..+++|+ .|++++|.+++..+..+. ..+|+.|+|++|+|++..+..|..+++|+.|+|++|.+++
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 3333333333333 555555555553333332 2355555555555555444445555555555555555554
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=4.4e-27 Score=240.22 Aligned_cols=227 Identities=26% Similarity=0.265 Sum_probs=117.7
Q ss_pred EECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccC
Q 041034 67 LNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKL 146 (701)
Q Consensus 67 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 146 (701)
++..+.++. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444555554 3444332 3566666666666655555666666666666666666555555555555555555555555
Q ss_pred CCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCC-cccc
Q 041034 147 SGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA-IPST 225 (701)
Q Consensus 147 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~p~~ 225 (701)
++..+. .|.++++|++|++++|++++..+..++.+++|++|++++|.+++. +|..
T Consensus 89 ~~~~~~------------------------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 89 QSLALG------------------------AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp CEECTT------------------------TTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CccChh------------------------hhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchh
Confidence 443333 344444444444555554444444455555555555555555542 3555
Q ss_pred ccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCc-EEEccCccCCCCCcccccCccce
Q 041034 226 LGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQ-YLNLSSNLLSGQIPFAIGKLFNL 304 (701)
Q Consensus 226 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L 304 (701)
+..+++|++|+|++|++++..+..+..+++|+ .|. .|++++|.+++..+..+. ..+|
T Consensus 145 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---------------------~l~l~L~ls~n~l~~~~~~~~~-~~~L 202 (276)
T 2z62_A 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP---------------------LLNLSLDLSLNPMNFIQPGAFK-EIRL 202 (276)
T ss_dssp GGGCTTCCEEECCSSCCCEECGGGGHHHHTCT---------------------TCCEEEECCSSCCCEECTTSSC-SCCE
T ss_pred hccCCCCCEEECCCCCCCcCCHHHhhhhhhcc---------------------ccceeeecCCCcccccCccccC-CCcc
Confidence 66666666666666666655444444444444 000 444444444433332222 2245
Q ss_pred eeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCC
Q 041034 305 VSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTI 342 (701)
Q Consensus 305 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 342 (701)
+.|+|++|++++..+..+..+++|+.|+|++|++++..
T Consensus 203 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 203 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp EEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred cEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 55555555555444444455555666666666655443
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=2.2e-27 Score=241.81 Aligned_cols=138 Identities=28% Similarity=0.380 Sum_probs=62.2
Q ss_pred ccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEE
Q 041034 205 LKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLN 284 (701)
Q Consensus 205 l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 284 (701)
+++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 108 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 33333333333333333333333444444444444444443333344444444444444444444444444444444444
Q ss_pred ccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCcccccc
Q 041034 285 LSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKI 349 (701)
Q Consensus 285 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 349 (701)
+++|.+++..+..+..+++|+.|+|++|.+.+. +++|+.|++..|+++|.+|.+++.+
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 444444444444444444555555555544432 2345555555555555555555544
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1e-25 Score=229.23 Aligned_cols=202 Identities=29% Similarity=0.312 Sum_probs=138.0
Q ss_pred CCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEce
Q 041034 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVM 166 (701)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 166 (701)
+++++++++++++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+++...+..|.++++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4678888888888 4565553 678888888888887777788888888888888888887766667777777777777
Q ss_pred ecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCC
Q 041034 167 YNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFI 246 (701)
Q Consensus 167 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 246 (701)
+|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 77777666666666677777777777666666666666666666666666666555555566666666666666666555
Q ss_pred CcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCC
Q 041034 247 PLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLS 291 (701)
Q Consensus 247 ~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 291 (701)
+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 555555666666666666665554445555555666666655554
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=1.6e-26 Score=235.43 Aligned_cols=187 Identities=32% Similarity=0.326 Sum_probs=97.8
Q ss_pred CCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCc
Q 041034 202 IGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQ 281 (701)
Q Consensus 202 ~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 281 (701)
+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 34444444444444444431 2344455555555555555554444445555555555555555544444455555555
Q ss_pred EEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEccccc
Q 041034 282 YLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNN 361 (701)
Q Consensus 282 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~ 361 (701)
.|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|+|++|++++..|..++.+++|+.|++++|+
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 55555555554444444555555555555555554444445555555555555555555555555555555555555555
Q ss_pred CcccCCCCccccccccccCCCCCcCCCcCCCC
Q 041034 362 LSGTIPMTLHPMFLDMSFNNLEGEIPTYLRDN 393 (701)
Q Consensus 362 l~g~~p~~~~~~~l~ls~N~l~g~~p~~~~~~ 393 (701)
++|.+|. ..+++++.|+++|.+|.++...
T Consensus 217 ~~~~~~~---l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 217 WDCTCPG---IRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp BCCCTTT---THHHHHHHHHTGGGBBCTTSCB
T ss_pred ccccCcH---HHHHHHHHHhCCCcccCccccc
Confidence 5555542 2345555666666666554433
No 326
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.94 E-value=6.9e-29 Score=264.00 Aligned_cols=130 Identities=21% Similarity=0.173 Sum_probs=86.9
Q ss_pred EEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCC----cccCCCC-CCCEEECCCCCCCCCCccccCCc-----cc
Q 041034 66 YLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIP----KEIGSLR-NLEVLYLSNNSLHGTTPIEIGSL-----RN 135 (701)
Q Consensus 66 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l-----~~ 135 (701)
+++|+.|++++.+|..+...++|++|+|++|.+++..+ +.|..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 45677888887777777766778888888888876665 6677777 78888888888877766666664 77
Q ss_pred cceeecccccCCCCCcccccC----C-CCCcEEEceecccCCCcCccccc-----ccccceeEeeecccC
Q 041034 136 LEELYLRSNKLSGVLPQEIGN----L-KSLIWLSVMYNTVGGPIPSTLFR-----LTNLERLFLGCNQFN 195 (701)
Q Consensus 136 L~~L~L~~n~l~~~~~~~~~~----l-~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~ 195 (701)
|++|+|++|++++..+..+.. + ++|++|+|++|.+++..+..+.. .++|++|+|++|+++
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 777777777777665554333 2 56666666666665554444332 135555555555555
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=3e-25 Score=227.87 Aligned_cols=202 Identities=23% Similarity=0.211 Sum_probs=98.6
Q ss_pred CCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccce
Q 041034 59 SCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEE 138 (701)
Q Consensus 59 ~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 138 (701)
+.+++++.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..+. +.+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCE
Confidence 34445555555555554 2333332 3455555555555544444555555555555555554432221 33344444
Q ss_pred eecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccc
Q 041034 139 LYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218 (701)
Q Consensus 139 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 218 (701)
|+|++|+++ .+|..+..+++|++|+|++|++++..+..|.++++|++|+|++|+|
T Consensus 82 L~Ls~N~l~-------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l 136 (290)
T 1p9a_G 82 LDLSHNQLQ-------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136 (290)
T ss_dssp EECCSSCCS-------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCC
Confidence 444444333 2233344444555555555555544444455555555555555555
Q ss_pred cCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCC
Q 041034 219 TGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLS 291 (701)
Q Consensus 219 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 291 (701)
++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 137 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 5444444555555555555555555544444455555555555555555 34444444555555555555554
No 328
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=9.4e-28 Score=255.23 Aligned_cols=223 Identities=22% Similarity=0.159 Sum_probs=129.0
Q ss_pred EEecccccccccCCcccCCCCCCcEEECCCCcceeeCC----cccCCCC-CCCEEECcCCcCcccCCcccCCC-----CC
Q 041034 42 IELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIP----PQIGSLS-NLKYLNLRWNNLTGTIPKEIGSL-----RN 111 (701)
Q Consensus 42 l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~ 111 (701)
.+++.++++|.++. .+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..|..+ ++
T Consensus 3 ~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35566666665543 23444557777777777776555 5666677 77777777777776666666554 77
Q ss_pred CCEEECCCCCCCCCCccccCCc-----cccceeecccccCCCCCccccc----C-CCCCcEEEceecccCCCcCcc----
Q 041034 112 LEVLYLSNNSLHGTTPIEIGSL-----RNLEELYLRSNKLSGVLPQEIG----N-LKSLIWLSVMYNTVGGPIPST---- 177 (701)
Q Consensus 112 L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~----~-l~~L~~L~L~~N~l~~~~~~~---- 177 (701)
|++|+|++|++++..+..+... ++|++|+|++|++++..+..+. . .++|++|+|++|.+++..+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 7777777777776666544333 6777777777777766554433 3 257777777777776543332
Q ss_pred ccccc-ccceeEeeecccCCCCCCCCCC----c-cccCccccccccccCC----ccccccC-CCcccEEEeccCCCCCCC
Q 041034 178 LFRLT-NLERLFLGCNQFNGTIPREIGN----L-KNLTHLSIITNKLTGA----IPSTLGH-LTSLLYLDLSFNQLHSFI 246 (701)
Q Consensus 178 ~~~l~-~L~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~l~~N~l~~~----~p~~l~~-l~~L~~L~L~~N~l~~~~ 246 (701)
+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|.|++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 23333 6666666666666544433322 2 3555566666655542 2333333 235555555555555432
Q ss_pred C----cccCCCCcccEEEcCCCC
Q 041034 247 P----LEIGNFSALAELDLSDNK 265 (701)
Q Consensus 247 ~----~~~~~~~~L~~L~L~~N~ 265 (701)
+ ..+..+++|+.|+|++|.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~ 264 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDI 264 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCC
Confidence 2 122344445555555554
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=1.8e-25 Score=224.89 Aligned_cols=190 Identities=25% Similarity=0.251 Sum_probs=99.7
Q ss_pred CCCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCC
Q 041034 24 DHCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIP 103 (701)
Q Consensus 24 d~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 103 (701)
+||.|.|++|... . +.++++++.++ .+|..+. ++|++|+|++|++++..+
T Consensus 3 ~Cp~~~gC~C~~~--~-------------------------~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~ 52 (251)
T 3m19_A 3 TCETVTGCTCNEG--K-------------------------KEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSD 52 (251)
T ss_dssp -CHHHHSSEEEGG--G-------------------------TEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC--C-------------------------eEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCH
Confidence 5889999999521 1 23444455544 3343333 456666666666665555
Q ss_pred cccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccc
Q 041034 104 KEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTN 183 (701)
Q Consensus 104 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 183 (701)
..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+..|..+++
T Consensus 53 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 132 (251)
T 3m19_A 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTK 132 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCc
Confidence 56666666666666666666555555666666666666666665555555555555555555555444444444444444
Q ss_pred cceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCC
Q 041034 184 LERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLH 243 (701)
Q Consensus 184 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 243 (701)
|++|+|++|++++..+..|+.+++|++|+|++|++++..+..+..+++|++|+|++|++.
T Consensus 133 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 133 LKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 444554444444443334444444444444444444433334444444444444444443
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=3.6e-25 Score=227.28 Aligned_cols=202 Identities=24% Similarity=0.185 Sum_probs=145.5
Q ss_pred eCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCC
Q 041034 33 CDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNL 112 (701)
Q Consensus 33 c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 112 (701)
|....+++.+++.+++++. ++. .-.++++.|+|++|.+++..+..|..+++|++|+|++|.+++..+. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~---~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPP---DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCS---CCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCCc-CCC---CCCCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 4445578888888888874 333 2237899999999999999899999999999999999999976543 789999
Q ss_pred CEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeec
Q 041034 113 EVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCN 192 (701)
Q Consensus 113 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 192 (701)
++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 66778889999999999999998877777777777777777777776665555556666666666666
Q ss_pred ccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCC
Q 041034 193 QFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQL 242 (701)
Q Consensus 193 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 242 (701)
++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 655444444445555555555555554 3344444444444444444444
No 331
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.92 E-value=1.8e-28 Score=278.72 Aligned_cols=322 Identities=13% Similarity=0.029 Sum_probs=171.0
Q ss_pred CCCCcEEECCCCcceee----CCcccCCCCCCCEEECcCCcCc----ccCCcccCCCCCCCEEECCCCCCCCCCccccCC
Q 041034 61 FPNLQYLNLWNNNLSGS----IPPQIGSLSNLKYLNLRWNNLT----GTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS 132 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 132 (701)
+++|++|+|++|.+++. ++..+..+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ ++..+..
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 34444444444444332 2222333444444444444443 1222233344445555554444443 3333444
Q ss_pred ccccceeecccccCC---CCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCC-CCCCCcccc
Q 041034 133 LRNLEELYLRSNKLS---GVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP-REIGNLKNL 208 (701)
Q Consensus 133 l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L 208 (701)
+++|++|+++.+... +..+..+..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 444444444432111 1222334444455555544432 24456667778888888888888664333 335677788
Q ss_pred Ccccccccccc-CCccccccCCCcccEEEec-----------cCCCCCCCCc-ccCCCCcccEEEcCCCCCccccCcccC
Q 041034 209 THLSIITNKLT-GAIPSTLGHLTSLLYLDLS-----------FNQLHSFIPL-EIGNFSALAELDLSDNKIRGIIPDELS 275 (701)
Q Consensus 209 ~~L~l~~N~l~-~~~p~~l~~l~~L~~L~L~-----------~N~l~~~~~~-~~~~~~~L~~L~L~~N~l~~~~p~~l~ 275 (701)
++|+++ |.+. +.++..+..+++|++|+|+ .|.+++.... ....+++|+.|+++.|.+++..+..+.
T Consensus 321 ~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~ 399 (592)
T 3ogk_B 321 EVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIG 399 (592)
T ss_dssp CEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHH
T ss_pred CEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHH
Confidence 888887 3333 2333344566777778777 3555542222 223467777777777777766555555
Q ss_pred C-CCCCcEEEcc----CccCCCC-----CcccccCccceeeecCCCCc--CCCCCCCccc-CCCCCCeeeccCCccCC-C
Q 041034 276 K-LSNLQYLNLS----SNLLSGQ-----IPFAIGKLFNLVSLDLSKNK--LSGSFPTGIG-NCTELQHLALNHNSLDG-T 341 (701)
Q Consensus 276 ~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~L~~N~l~~-~ 341 (701)
. +++|+.|+++ .|.+++. ++..+.++++|+.|+++.|. +++..+..+. .+++|+.|+|++|++++ .
T Consensus 400 ~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 479 (592)
T 3ogk_B 400 TYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEG 479 (592)
T ss_dssp HHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHH
T ss_pred hhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHH
Confidence 4 6777777775 5666653 23334556677777776432 5444333333 25667777777777664 2
Q ss_pred CCccccccccCCeEEcccccCccc-CCCC----ccccccccccCCCCCc
Q 041034 342 IPPEIGKILLLQNLDLSHNNLSGT-IPMT----LHPMFLDMSFNNLEGE 385 (701)
Q Consensus 342 ~p~~~~~l~~L~~l~ls~N~l~g~-~p~~----~~~~~l~ls~N~l~g~ 385 (701)
++..+..+++|+.|+|++|++++. ++.. -...+|++++|++++.
T Consensus 480 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 480 LMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 344445666777777777776543 2211 1123567777776654
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=232.89 Aligned_cols=224 Identities=21% Similarity=0.151 Sum_probs=169.5
Q ss_pred CCCEEECcCCcCcccCC-c--ccCCCCCCCEEECCCCCCCCCCcccc--CCccccceeecccccCCCCCc----ccccCC
Q 041034 87 NLKYLNLRWNNLTGTIP-K--EIGSLRNLEVLYLSNNSLHGTTPIEI--GSLRNLEELYLRSNKLSGVLP----QEIGNL 157 (701)
Q Consensus 87 ~L~~L~L~~n~l~~~~p-~--~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 157 (701)
.++.|.+.++.++...- . .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 46777777766652210 0 12234668888888888887777777 778888888888888876544 345577
Q ss_pred CCCcEEEceecccCCCcCcccccccccceeEeeecccCCC--C--CCCCCCccccCccccccccccCCccc----cccCC
Q 041034 158 KSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGT--I--PREIGNLKNLTHLSIITNKLTGAIPS----TLGHL 229 (701)
Q Consensus 158 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~l 229 (701)
++|++|+|++|.+++..+..+..+++|++|+|++|++.+. + +..++.+++|++|+|++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 8888888888888888788888888888888888887642 1 2334778889999999999873 232 25678
Q ss_pred CcccEEEeccCCCCCCCCcccCCC---CcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceee
Q 041034 230 TSLLYLDLSFNQLHSFIPLEIGNF---SALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVS 306 (701)
Q Consensus 230 ~~L~~L~L~~N~l~~~~~~~~~~~---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 306 (701)
++|++|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 899999999999998878777766 69999999999999 5677664 7899999999999864 33 577889999
Q ss_pred ecCCCCcCCC
Q 041034 307 LDLSKNKLSG 316 (701)
Q Consensus 307 L~Ls~N~l~~ 316 (701)
|+|++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999874
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=6.9e-25 Score=218.85 Aligned_cols=178 Identities=19% Similarity=0.242 Sum_probs=91.3
Q ss_pred CCCEEECcCCcCcccCCcccCCCCCCCEEECCCCC-CCCCCccccCCccccceeeccc-ccCCCCCcccccCCCCCcEEE
Q 041034 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNS-LHGTTPIEIGSLRNLEELYLRS-NKLSGVLPQEIGNLKSLIWLS 164 (701)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 164 (701)
+|++|+|++|++++..+..|.++++|++|+|++|+ ++...+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 66777777777766666566666666666666665 6655555566666666666665 555544444444444444444
Q ss_pred ceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccC---ccccccc-cccCCccccccCCCccc-EEEecc
Q 041034 165 VMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLT---HLSIITN-KLTGAIPSTLGHLTSLL-YLDLSF 239 (701)
Q Consensus 165 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~p~~l~~l~~L~-~L~L~~ 239 (701)
+++| ++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++
T Consensus 112 l~~n------------------------~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 112 IFNT------------------------GLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEEE------------------------CCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCC------------------------CCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 4444 4443 222 33344443 4444444 44443334444444455 555555
Q ss_pred CCCCCCCCcccCCCCcccEEEcCCCC-CccccCcccCCC-CCCcEEEccCccCC
Q 041034 240 NQLHSFIPLEIGNFSALAELDLSDNK-IRGIIPDELSKL-SNLQYLNLSSNLLS 291 (701)
Q Consensus 240 N~l~~~~~~~~~~~~~L~~L~L~~N~-l~~~~p~~l~~l-~~L~~L~L~~N~l~ 291 (701)
|+++...+..+.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|+++
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 5544322222222 445555555552 444444444444 44555555444444
No 334
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=2e-27 Score=250.10 Aligned_cols=267 Identities=16% Similarity=0.145 Sum_probs=164.8
Q ss_pred CCCcceeEeCCCCCEEEEEecccccccccCCcccCCC--CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCccc-
Q 041034 25 HCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCF--PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGT- 101 (701)
Q Consensus 25 ~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~- 101 (701)
|..|.++.|+ ...++.++++++.+.+. .+..+ +.++.|++++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~-~~~~~~l~l~~~~~~~~----~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASD-ESLWQTLDLTGKNLHPD----VTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTC-STTSSEEECTTCBCCHH----HHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcC-chhheeeccccccCCHH----HHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 3469888876 33466677766655421 23333 5666677776666655444 44566666666666666654
Q ss_pred CCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccc-cCCCC-CcccccCCCCCcEEEceec-ccCCCcCccc
Q 041034 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSN-KLSGV-LPQEIGNLKSLIWLSVMYN-TVGGPIPSTL 178 (701)
Q Consensus 102 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~ 178 (701)
+|..+..+++|++|+|++|++++..+..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++.
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~----- 184 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK----- 184 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-----
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-----
Confidence 5556666666666666666666555556666666666666666 45432 3444444455555555554 44332
Q ss_pred ccccccceeEeeecccCCCCCCCCCCcc-ccCccccccc--ccc-CCccccccCCCcccEEEeccCC-CCCCCCcccCCC
Q 041034 179 FRLTNLERLFLGCNQFNGTIPREIGNLK-NLTHLSIITN--KLT-GAIPSTLGHLTSLLYLDLSFNQ-LHSFIPLEIGNF 253 (701)
Q Consensus 179 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N--~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~ 253 (701)
.++..+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+
T Consensus 185 ------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 185 ------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp ------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred ------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 0233344455 5566666665 333 3455566677788888888887 666666677777
Q ss_pred CcccEEEcCCCC-CccccCcccCCCCCCcEEEccCccCCCCCcccccCc-cceeeecCCCCcCCCCCCCcccC
Q 041034 254 SALAELDLSDNK-IRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKL-FNLVSLDLSKNKLSGSFPTGIGN 324 (701)
Q Consensus 254 ~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~ 324 (701)
++|+.|+|++|. +.......+..+++|+.|++++| ++.. .+..+ .+|..|++++|++++..|..+++
T Consensus 247 ~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 247 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 888888888884 33222235777888888888888 4422 33334 34777788999999888887765
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=9.2e-25 Score=217.96 Aligned_cols=197 Identities=20% Similarity=0.179 Sum_probs=139.7
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCc-CcccCCcccCCCCCCCEEECCC-CCCCCCCccccCCcccccee
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNN-LTGTIPKEIGSLRNLEVLYLSN-NSLHGTTPIEIGSLRNLEEL 139 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L 139 (701)
++|++|+|++|++++..+..|+.+++|++|+|++|. ++++.+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 489999999999998888899999999999999997 9988888999999999999999 99998888899999999999
Q ss_pred ecccccCCCCCcccccCCCCCc---EEEceec-ccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccC-ccccc
Q 041034 140 YLRSNKLSGVLPQEIGNLKSLI---WLSVMYN-TVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLT-HLSII 214 (701)
Q Consensus 140 ~L~~n~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~ 214 (701)
+|++|++++ +|. |..+++|+ +|++++| .+++..+..|..+++ |+ +|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~------------------------L~~~L~l~ 164 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCN------------------------ETLTLKLY 164 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBS------------------------SEEEEECC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhc------------------------ceeEEEcC
Confidence 999999987 454 66666665 5555555 554444444444444 44 45555
Q ss_pred cccccCCccccccCCCcccEEEeccCC-CCCCCCcccCCC-CcccEEEcCCCCCccccCcccCCCCCCcEEEccCc
Q 041034 215 TNKLTGAIPSTLGHLTSLLYLDLSFNQ-LHSFIPLEIGNF-SALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSN 288 (701)
Q Consensus 215 ~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 288 (701)
+|+++...+..+.. ++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|+|++..+. .+++|+.|+++++
T Consensus 165 ~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 165 NNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp SCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 55544222222222 556666666663 655445555666 6666666666666643222 3455666666554
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=1.9e-27 Score=255.33 Aligned_cols=256 Identities=21% Similarity=0.231 Sum_probs=162.4
Q ss_pred eCCcccCCCCCCCEEECcCCcCcccCC----cccCCCCCCCEEECCCCC---CCCCCcccc-------CCccccceeecc
Q 041034 77 SIPPQIGSLSNLKYLNLRWNNLTGTIP----KEIGSLRNLEVLYLSNNS---LHGTTPIEI-------GSLRNLEELYLR 142 (701)
Q Consensus 77 ~~~~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~Ls~N~---l~~~~~~~~-------~~l~~L~~L~L~ 142 (701)
.++..+..+++|++|+|++|.+++..+ ..|..+++|++|+|++|. +++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 345556666777777777777765433 345667777777777753 333444333 455666666666
Q ss_pred cccCCC----CCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccc
Q 041034 143 SNKLSG----VLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKL 218 (701)
Q Consensus 143 ~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 218 (701)
+|.+++ .+|..+..+++|++|+|++|.++...+..+... |.. +..|++.+. .++|++|+|++|++
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~--l~~~~~~~~-------~~~L~~L~L~~n~l 171 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQE--LAVNKKAKN-------APPLRSIICGRNRL 171 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHH--HHHHHHHHT-------CCCCCEEECCSSCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHH--Hhhhhhccc-------CCCCcEEECCCCCC
Confidence 666665 344555555556666666555543322222211 000 001111110 05666666666666
Q ss_pred c-CCcc---ccccCCCcccEEEeccCCCCC-----CCCcccCCCCcccEEEcCCCCCc----cccCcccCCCCCCcEEEc
Q 041034 219 T-GAIP---STLGHLTSLLYLDLSFNQLHS-----FIPLEIGNFSALAELDLSDNKIR----GIIPDELSKLSNLQYLNL 285 (701)
Q Consensus 219 ~-~~~p---~~l~~l~~L~~L~L~~N~l~~-----~~~~~~~~~~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L 285 (701)
+ +.+| ..+..+++|++|+|++|+++. ..|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|
T Consensus 172 ~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 172 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred CcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 5 2333 356667778888888887772 33446777888888888888886 567777888888888888
Q ss_pred cCccCCCC----Cccccc--CccceeeecCCCCcCCC----CCCCcc-cCCCCCCeeeccCCccCCCCC
Q 041034 286 SSNLLSGQ----IPFAIG--KLFNLVSLDLSKNKLSG----SFPTGI-GNCTELQHLALNHNSLDGTIP 343 (701)
Q Consensus 286 ~~N~l~~~----~~~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~p 343 (701)
++|.+++. ++..+. .+++|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..+
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 88888765 455553 37888889999888886 477777 567899999999999987664
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.92 E-value=1.3e-26 Score=243.92 Aligned_cols=253 Identities=23% Similarity=0.277 Sum_probs=171.4
Q ss_pred CcEEECCCCcceeeCCcccCCC--CCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCC-CccccCCccccceee
Q 041034 64 LQYLNLWNNNLSGSIPPQIGSL--SNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGT-TPIEIGSLRNLEELY 140 (701)
Q Consensus 64 L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~ 140 (701)
++.|++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. .+..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 455555555544 2333444 4555555555555544433 33455555555555555433 444444455555555
Q ss_pred cccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeec-ccCC-CCCCCCCCccccCccccccc-c
Q 041034 141 LRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCN-QFNG-TIPREIGNLKNLTHLSIITN-K 217 (701)
Q Consensus 141 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~-~~~~~~~~l~~L~~L~l~~N-~ 217 (701)
|++|+++ +..+..++.+++|++|+|++| .+++ .++..+.++++|++|++++| .
T Consensus 125 L~~~~l~------------------------~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~ 180 (336)
T 2ast_B 125 LEGLRLS------------------------DPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180 (336)
T ss_dssp CTTCBCC------------------------HHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTT
T ss_pred CcCcccC------------------------HHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCC
Confidence 5555444 444445555556666666666 4543 24445667788888888888 8
Q ss_pred ccCC-ccccccCCC-cccEEEeccC--CCC-CCCCcccCCCCcccEEEcCCCC-CccccCcccCCCCCCcEEEccCcc-C
Q 041034 218 LTGA-IPSTLGHLT-SLLYLDLSFN--QLH-SFIPLEIGNFSALAELDLSDNK-IRGIIPDELSKLSNLQYLNLSSNL-L 290 (701)
Q Consensus 218 l~~~-~p~~l~~l~-~L~~L~L~~N--~l~-~~~~~~~~~~~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~-l 290 (701)
+++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|+|++|. +++..+..+..+++|+.|++++|. +
T Consensus 181 l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~ 260 (336)
T 2ast_B 181 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDI 260 (336)
T ss_dssp CCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTC
T ss_pred cChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCC
Confidence 8764 577788899 9999999999 565 4466677889999999999999 887888899999999999999995 3
Q ss_pred CCCCcccccCccceeeecCCCCcCCCCCCCcccCC-CCCCeeeccCCccCCCCCccccc
Q 041034 291 SGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNC-TELQHLALNHNSLDGTIPPEIGK 348 (701)
Q Consensus 291 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~ 348 (701)
+......+..+++|+.|++++| ++. ..+..+ ..|..|++++|++++..|..++.
T Consensus 261 ~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 261 IPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 3222236788999999999999 442 234444 34888899999999999988774
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=9.3e-28 Score=257.74 Aligned_cols=247 Identities=21% Similarity=0.211 Sum_probs=181.0
Q ss_pred cCCcccCCCCCCCEEECCCCCCCCCCc----cccCCccccceeecccccC---CCCCcccc-------cCCCCCcEEEce
Q 041034 101 TIPKEIGSLRNLEVLYLSNNSLHGTTP----IEIGSLRNLEELYLRSNKL---SGVLPQEI-------GNLKSLIWLSVM 166 (701)
Q Consensus 101 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~n~l---~~~~~~~~-------~~l~~L~~L~L~ 166 (701)
.++..+..+++|++|+|++|+++...+ ..+..+++|++|+|++|.+ ++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 456677788889999999998886644 3466788888888888644 34445444 344555555555
Q ss_pred ecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcccc----ccCC---------Cccc
Q 041034 167 YNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPST----LGHL---------TSLL 233 (701)
Q Consensus 167 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~----l~~l---------~~L~ 233 (701)
+|.+++.... .+|..+..+++|++|+|++|.+++..+.. +..+ ++|+
T Consensus 103 ~n~l~~~~~~--------------------~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 103 DNAFGPTAQE--------------------PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp SCCCCTTTHH--------------------HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred CCcCCHHHHH--------------------HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCc
Confidence 5555441000 23334444455555555555554322222 2222 8999
Q ss_pred EEEeccCCCC-CCCC---cccCCCCcccEEEcCCCCCc--c---ccCcccCCCCCCcEEEccCccCC----CCCcccccC
Q 041034 234 YLDLSFNQLH-SFIP---LEIGNFSALAELDLSDNKIR--G---IIPDELSKLSNLQYLNLSSNLLS----GQIPFAIGK 300 (701)
Q Consensus 234 ~L~L~~N~l~-~~~~---~~~~~~~~L~~L~L~~N~l~--~---~~p~~l~~l~~L~~L~L~~N~l~----~~~~~~~~~ 300 (701)
+|+|++|+++ +.++ ..+..+++|+.|+|++|+|+ | ..|..+..+++|+.|+|++|.++ +.+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 9999999998 3344 35678899999999999998 3 45558899999999999999996 577888999
Q ss_pred ccceeeecCCCCcCCCC----CCCcc--cCCCCCCeeeccCCccCC----CCCccc-cccccCCeEEcccccCcccCC
Q 041034 301 LFNLVSLDLSKNKLSGS----FPTGI--GNCTELQHLALNHNSLDG----TIPPEI-GKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 301 l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~l~ls~N~l~g~~p 367 (701)
+++|+.|+|++|.+++. +|..+ +.+++|++|+|++|++++ .+|..+ .++++|+.|++++|++++..|
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999999999875 56666 448999999999999997 488887 668999999999999998765
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=3.4e-25 Score=230.17 Aligned_cols=225 Identities=20% Similarity=0.191 Sum_probs=155.5
Q ss_pred CCCCEEECCCCCCCCCCcc---ccCCccccceeecccccCCCCCcccc--cCCCCCcEEEceecccCCCcC----ccccc
Q 041034 110 RNLEVLYLSNNSLHGTTPI---EIGSLRNLEELYLRSNKLSGVLPQEI--GNLKSLIWLSVMYNTVGGPIP----STLFR 180 (701)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~ 180 (701)
..++.|.+.++.++...-. .+..+++|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3467777777766532111 12234568888888888877777777 777788888888888776544 33456
Q ss_pred ccccceeEeeecccCCCCCCCCCCccccCccccccccccCC--c--cccccCCCcccEEEeccCCCCCCCCc----ccCC
Q 041034 181 LTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGA--I--PSTLGHLTSLLYLDLSFNQLHSFIPL----EIGN 252 (701)
Q Consensus 181 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~~~----~~~~ 252 (701)
+++|++|+|++|++++..+..++.+++|++|+|++|++.+. + +..+..+++|++|+|++|+++.. +. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhc
Confidence 77788888888888777777777788888888888876542 2 22335677788888888887642 22 2456
Q ss_pred CCcccEEEcCCCCCccccCcccCCC---CCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCC
Q 041034 253 FSALAELDLSDNKIRGIIPDELSKL---SNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQ 329 (701)
Q Consensus 253 ~~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 329 (701)
+++|+.|+|++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 6778888888888877767666665 57888888888887 5566554 6788888888888753 33 56677788
Q ss_pred eeeccCCccCC
Q 041034 330 HLALNHNSLDG 340 (701)
Q Consensus 330 ~L~L~~N~l~~ 340 (701)
.|+|++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 88888887763
No 340
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=2.6e-28 Score=277.43 Aligned_cols=299 Identities=14% Similarity=0.060 Sum_probs=190.3
Q ss_pred CCCCCCEEECcCCcCccc----CCcccCCCCCCCEEECCCCCCCCC----CccccCCccccceeecccccCCCCCccccc
Q 041034 84 SLSNLKYLNLRWNNLTGT----IPKEIGSLRNLEVLYLSNNSLHGT----TPIEIGSLRNLEELYLRSNKLSGVLPQEIG 155 (701)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 155 (701)
.+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++. ++..+.++++|++|+|++|.+.+ +|..+.
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~ 240 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFK 240 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHh
Confidence 344444444444444333 122233344455555555444421 12223344455555555554443 334444
Q ss_pred CCCCCcEEEceecccC---CCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcc-ccccCCCc
Q 041034 156 NLKSLIWLSVMYNTVG---GPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP-STLGHLTS 231 (701)
Q Consensus 156 ~l~~L~~L~L~~N~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~ 231 (701)
++++|+.|+++.+... +..+..+..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++
T Consensus 241 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 241 AAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp HCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 4555555555432211 2223344555566666665542 23566777888999999999999876443 44688999
Q ss_pred ccEEEeccCCCCC-CCCcccCCCCcccEEEcC-----------CCCCcccc-CcccCCCCCCcEEEccCccCCCCCcccc
Q 041034 232 LLYLDLSFNQLHS-FIPLEIGNFSALAELDLS-----------DNKIRGII-PDELSKLSNLQYLNLSSNLLSGQIPFAI 298 (701)
Q Consensus 232 L~~L~L~~N~l~~-~~~~~~~~~~~L~~L~L~-----------~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 298 (701)
|++|+++ |.+.. .++..+..+++|+.|+|+ .|.+++.. +..+..+++|+.|+++.|.+++..+..+
T Consensus 320 L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l 398 (592)
T 3ogk_B 320 LEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESI 398 (592)
T ss_dssp CCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHH
T ss_pred CCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHH
Confidence 9999999 44443 334444678999999999 46777542 2234568999999999999998777777
Q ss_pred cC-ccceeeecCC----CCcCCCC-----CCCcccCCCCCCeeeccCC--ccCCCCCccccc-cccCCeEEcccccCccc
Q 041034 299 GK-LFNLVSLDLS----KNKLSGS-----FPTGIGNCTELQHLALNHN--SLDGTIPPEIGK-ILLLQNLDLSHNNLSGT 365 (701)
Q Consensus 299 ~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~~p~~~~~-l~~L~~l~ls~N~l~g~ 365 (701)
+. +++|+.|+++ .|.+++. ++..+..+++|++|+|++| .+++..+..++. +++|++|+|++|++++.
T Consensus 399 ~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 478 (592)
T 3ogk_B 399 GTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE 478 (592)
T ss_dssp HHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH
T ss_pred HhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH
Confidence 65 8899999996 7788864 3334677899999999854 366655555554 78999999999999862
Q ss_pred -CCCC----ccccccccccCCCCCc
Q 041034 366 -IPMT----LHPMFLDMSFNNLEGE 385 (701)
Q Consensus 366 -~p~~----~~~~~l~ls~N~l~g~ 385 (701)
++.. -....|++++|++++.
T Consensus 479 ~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 479 GLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHhcCcccCeeeccCCCCcHH
Confidence 3322 2245899999998754
No 341
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=7.8e-26 Score=251.74 Aligned_cols=180 Identities=17% Similarity=0.208 Sum_probs=134.1
Q ss_pred ccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccCh-----HHHHHHHHHHHHHhcCCCCceeeeeeeeeeCcEEEEE
Q 041034 453 HIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDS-----AFVESFQNEARVLSTVRHRNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 527 (701)
...+.||+|+||.||+|.. .++.+|+|+......... ...+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999955 578899998765443322 2245689999999999999999766666677778999
Q ss_pred EEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcccccc
Q 041034 528 YEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHV 607 (701)
Q Consensus 528 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~ 607 (701)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+|+....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999865 457999999999999999 9999999999999998 999999999998753
Q ss_pred CCCC-------ceeecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 608 DSSN-------RTLRAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 608 ~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
.... .....||+.|+|||++...........|+|+...-.++
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~ 530 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMK 530 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHH
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 2211 12457999999999987632222222377876554443
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=1.5e-23 Score=210.75 Aligned_cols=183 Identities=22% Similarity=0.290 Sum_probs=146.7
Q ss_pred cccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEc
Q 041034 182 TNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDL 261 (701)
Q Consensus 182 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 261 (701)
.+.+.++++++.++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35667777777777 4555554 57888888888888777777888888888888888888877777888888888888
Q ss_pred CCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCC
Q 041034 262 SDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGT 341 (701)
Q Consensus 262 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 341 (701)
++|+|++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888877777788888888888888888877666778888888888888888876666788888888888888888877
Q ss_pred CCccccccccCCeEEcccccCcccCC
Q 041034 342 IPPEIGKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 342 ~p~~~~~l~~L~~l~ls~N~l~g~~p 367 (701)
.+..+..+++|+.|+|++|+++|..+
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 77788888888888888888887733
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.5e-23 Score=204.47 Aligned_cols=185 Identities=24% Similarity=0.278 Sum_probs=153.8
Q ss_pred CCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCc
Q 041034 25 HCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPK 104 (701)
Q Consensus 25 ~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 104 (701)
.|.|.+|.|+..+ ++ .+ .....++|++|+|++|++++..+..|+.+++|++|+|++|++++..+.
T Consensus 6 ~C~~~~v~c~~~~-----------l~-~~---p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQG-----------RT-SV---PTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSSC-----------CS-SC---CSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCCC-----------cc-CC---CCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 4789999997543 21 11 123356899999999999977777789999999999999999977777
Q ss_pred ccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCccccccccc
Q 041034 105 EIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNL 184 (701)
Q Consensus 105 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 184 (701)
.|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|+.|++++|.+++..+..+..+++|
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 150 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc
Confidence 88999999999999999998877788999999999999999998888888899999999999999988777778888899
Q ss_pred ceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCc
Q 041034 185 ERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTS 231 (701)
Q Consensus 185 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~ 231 (701)
+.|+|++|.+.+. +++|++|+++.|+++|.+|+.++.++.
T Consensus 151 ~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 151 QYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cEEEecCCCeecC-------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 9999998877643 457888888888888888888776654
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=3e-23 Score=219.27 Aligned_cols=239 Identities=18% Similarity=0.172 Sum_probs=116.5
Q ss_pred EEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCc-cccCCccccce-eeccc
Q 041034 66 YLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTP-IEIGSLRNLEE-LYLRS 143 (701)
Q Consensus 66 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~-L~L~~ 143 (701)
+++.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+| ..|.++++|.+ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4666666666 455544 2466777777777765555566677777777777776654333 34555655543 44445
Q ss_pred ccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcc
Q 041034 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 144 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 223 (701)
|+++.+.|..|.++++|++|++++|.+....+..+....++..|++.++ |++....+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~-----------------------~~i~~l~~ 146 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN-----------------------INIHTIER 146 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC-----------------------TTCCEECT
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc-----------------------cccccccc
Confidence 5555555555555555555555555554444444444444444444321 23332222
Q ss_pred ccccCCC-cccEEEeccCCCCCCCCcccCCCCcccEEEcCC-CCCccccCcccCCCCCCcEEEccCccCCCCCcccccCc
Q 041034 224 STLGHLT-SLLYLDLSFNQLHSFIPLEIGNFSALAELDLSD-NKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKL 301 (701)
Q Consensus 224 ~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 301 (701)
..|..+. .++.|+|++|+|+.+ |.......+|+.|++++ |.++.+.++.|..+++|+.|+|++|+|+...+..+.++
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L 225 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL 225 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTC
T ss_pred cchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccc
Confidence 3333332 344555555555542 22222334555555543 33443333345555555555555555553333333333
Q ss_pred cceeeecCCCCcCCCCCCCcccCCCCCCeeeccC
Q 041034 302 FNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNH 335 (701)
Q Consensus 302 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 335 (701)
.+|+.+++ ++++ .+|. +.++++|+.+++++
T Consensus 226 ~~L~~l~~--~~l~-~lP~-l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 226 KKLRARST--YNLK-KLPT-LEKLVALMEASLTY 255 (350)
T ss_dssp CEEECTTC--TTCC-CCCC-TTTCCSCCEEECSC
T ss_pred hHhhhccC--CCcC-cCCC-chhCcChhhCcCCC
Confidence 33333322 1122 3442 44455555555543
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.2e-23 Score=218.09 Aligned_cols=192 Identities=29% Similarity=0.418 Sum_probs=85.9
Q ss_pred CCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEE
Q 041034 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWL 163 (701)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 163 (701)
.+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 34555555555555543 22 34555555555555555554333 55555555555555555432 134444444444
Q ss_pred EceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCC
Q 041034 164 SVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLH 243 (701)
Q Consensus 164 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 243 (701)
++++|.+++.. .+..+++|++|++++|++++..+ ++.+++|++|++++|++++..+ +..+++|+.|++++|+++
T Consensus 113 ~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 44444443321 14444444444444444443222 3344444444444444443222 444444444444444444
Q ss_pred CCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCC
Q 041034 244 SFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLS 291 (701)
Q Consensus 244 ~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 291 (701)
+..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|.++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 4222 3344444444444444443321 344444444444444443
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.6e-23 Score=217.21 Aligned_cols=195 Identities=29% Similarity=0.397 Sum_probs=172.3
Q ss_pred cCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccc
Q 041034 58 FSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137 (701)
Q Consensus 58 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 137 (701)
++.+++|++|++++|.++. ++ .+..+++|++|+|++|.+++..+ +..+++|++|+|++|++++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 4457889999999999985 44 68899999999999999996655 99999999999999999864 3689999999
Q ss_pred eeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCcccccccc
Q 041034 138 ELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNK 217 (701)
Q Consensus 138 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 217 (701)
+|+|++|++++.. .+..+++|++|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|++|++++|+
T Consensus 111 ~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 9999999999753 38999999999999999987655 8899999999999999997544 8999999999999999
Q ss_pred ccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCcc
Q 041034 218 LTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRG 268 (701)
Q Consensus 218 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~ 268 (701)
+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 997654 8899999999999999998653 8899999999999999985
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=2e-23 Score=220.63 Aligned_cols=224 Identities=17% Similarity=0.137 Sum_probs=173.8
Q ss_pred CCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCC-cccCCCCCCCE-EECCCCCCCCCCccccCCccccce
Q 041034 61 FPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIP-KEIGSLRNLEV-LYLSNNSLHGTTPIEIGSLRNLEE 138 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~~~~~~~l~~L~~ 138 (701)
.+++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+| .+|.++++|+. ++++.|+++...|..|..+++|++
T Consensus 29 ~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~ 108 (350)
T 4ay9_X 29 PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 108 (350)
T ss_dssp CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCE
T ss_pred CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccc
Confidence 3689999999999997777789999999999999999876655 57899998875 677789999999999999999999
Q ss_pred eecccccCCCCCcccccCCCCCcEEEcee-cccCCCcCccccccc-ccceeEeeecccCCCCCCCCCCccccCcccccc-
Q 041034 139 LYLRSNKLSGVLPQEIGNLKSLIWLSVMY-NTVGGPIPSTLFRLT-NLERLFLGCNQFNGTIPREIGNLKNLTHLSIIT- 215 (701)
Q Consensus 139 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~- 215 (701)
|++++|+++...+..+....++..|++.+ |.+....+..|..+. .++.|+|++|+|+.. |.......+|++|++++
T Consensus 109 L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~ 187 (350)
T 4ay9_X 109 LLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDN 187 (350)
T ss_dssp EEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTC
T ss_pred ccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccC
Confidence 99999999988888888888999999976 567666666677664 588889999998854 44444556788888864
Q ss_pred ccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCcc
Q 041034 216 NKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNL 289 (701)
Q Consensus 216 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 289 (701)
|.++...++.|..+++|++|||++|+|+...+..| .+|+.|.+.++.--..+|. +..+++|+.++++++.
T Consensus 188 n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 188 NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred CcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 66665555677888888888888888887544444 4445555444433335563 7777888888877654
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=3.4e-22 Score=194.77 Aligned_cols=157 Identities=28% Similarity=0.255 Sum_probs=77.0
Q ss_pred ccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEcc
Q 041034 207 NLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLS 286 (701)
Q Consensus 207 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 286 (701)
+|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 45555555555554444444455555555555555554444444455555555555555554444444555555555555
Q ss_pred CccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccC
Q 041034 287 SNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTI 366 (701)
Q Consensus 287 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~ 366 (701)
+|.+++..+..+..+++|+.|+|++|++++..+..+..+++|++|+|++|.+.+. ++.|++|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCcee
Confidence 5555544444444455555555555555543333344455555555555544432 223444455555555554
Q ss_pred CCCc
Q 041034 367 PMTL 370 (701)
Q Consensus 367 p~~~ 370 (701)
|..+
T Consensus 182 p~~~ 185 (208)
T 2o6s_A 182 RNSA 185 (208)
T ss_dssp BCTT
T ss_pred eccC
Confidence 4443
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2.6e-22 Score=223.26 Aligned_cols=189 Identities=29% Similarity=0.343 Sum_probs=108.7
Q ss_pred CCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecc
Q 041034 63 NLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLR 142 (701)
Q Consensus 63 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 142 (701)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 46666666666665 454442 56666666666666 344 334566666666666654 333 333 55555555
Q ss_pred cccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCc
Q 041034 143 SNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAI 222 (701)
Q Consensus 143 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 222 (701)
+|+|++ +| . .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +
T Consensus 129 ~N~l~~-lp------------------------~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 129 NNQLTM-LP------------------------E---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp SSCCSC-CC------------------------C---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CC------------------------C---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-c
Confidence 555554 22 2 23455555555555553 333 34556666666666654 4
Q ss_pred cccccCCCcccEEEeccCCCCCCCCcccCCCCcc-------cEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCc
Q 041034 223 PSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSAL-------AELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIP 295 (701)
Q Consensus 223 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L-------~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 295 (701)
|. |. ++|++|+|++|+|+. +|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~~-lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLES-LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCSS-CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCCc-hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 44 43 566666666666664 444 433 55 77777777777 466666677777777777777777777
Q ss_pred ccccCccc
Q 041034 296 FAIGKLFN 303 (701)
Q Consensus 296 ~~~~~l~~ 303 (701)
..+..+..
T Consensus 248 ~~l~~l~~ 255 (571)
T 3cvr_A 248 ESLSQQTA 255 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 66665443
No 350
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.88 E-value=9.7e-26 Score=256.26 Aligned_cols=342 Identities=15% Similarity=0.098 Sum_probs=158.8
Q ss_pred CEEEEEecccccccccCCcccCCCCCCcEEECCCC-cceee-CCcccCCCCCCCEEECcCCcCcccCCccc----CCCCC
Q 041034 38 SITHIELVECSIKGELGSLNFSCFPNLQYLNLWNN-NLSGS-IPPQIGSLSNLKYLNLRWNNLTGTIPKEI----GSLRN 111 (701)
Q Consensus 38 ~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l~~ 111 (701)
++++|++++|.+++.........+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 44555555554443221111113455555555555 33321 22223345555555555555543332222 23445
Q ss_pred CCEEECCCCCCCCCCccc----cCCccccceeecccc-cCCCCCcccccCCCCCcEEEceecc-----------------
Q 041034 112 LEVLYLSNNSLHGTTPIE----IGSLRNLEELYLRSN-KLSGVLPQEIGNLKSLIWLSVMYNT----------------- 169 (701)
Q Consensus 112 L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~N~----------------- 169 (701)
|++|+|++|. ....... +..+++|++|+|++| .+.+ ++..+..+++|+.|+++.+.
T Consensus 186 L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 186 LVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred CcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 5555555554 1111111 122355555555555 2222 44444445555555433321
Q ss_pred ---------cC----CCcCcccccccccceeEeeecccCCCC-CCCCCCccccCccccccccccCC-ccccccCCCcccE
Q 041034 170 ---------VG----GPIPSTLFRLTNLERLFLGCNQFNGTI-PREIGNLKNLTHLSIITNKLTGA-IPSTLGHLTSLLY 234 (701)
Q Consensus 170 ---------l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~-~p~~l~~l~~L~~ 234 (701)
+. +.++..+..+++|+.|+|++|.+++.. +..+..+++|++|++++| ++.. ++.....+++|++
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 00 011222224455666666555544321 112334555666666555 3221 1111223556666
Q ss_pred EEec---------cCCCCCCCCcccC-CCCcccEEEcCCCCCccccCcccC-CCCCCcEEEcc--C----ccCCCCC---
Q 041034 235 LDLS---------FNQLHSFIPLEIG-NFSALAELDLSDNKIRGIIPDELS-KLSNLQYLNLS--S----NLLSGQI--- 294 (701)
Q Consensus 235 L~L~---------~N~l~~~~~~~~~-~~~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~--~----N~l~~~~--- 294 (701)
|+++ .|.+++.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.+++..
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 6652 2333332222222 256666666666666654444443 36667777766 3 4444211
Q ss_pred --cccccCccceeeecCCCCcCCCCCCCcccC-CCCCCeeeccCCccCCCCCccc-cccccCCeEEcccccCcccCCCC-
Q 041034 295 --PFAIGKLFNLVSLDLSKNKLSGSFPTGIGN-CTELQHLALNHNSLDGTIPPEI-GKILLLQNLDLSHNNLSGTIPMT- 369 (701)
Q Consensus 295 --~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~l~ls~N~l~g~~p~~- 369 (701)
+..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+..
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~ 501 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLAN 501 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHT
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHH
Confidence 11244556677777755 555444444443 6667777777777654434333 45667777777777764332211
Q ss_pred ----ccccccccccCCCC
Q 041034 370 ----LHPMFLDMSFNNLE 383 (701)
Q Consensus 370 ----~~~~~l~ls~N~l~ 383 (701)
-....|++++|+++
T Consensus 502 ~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 502 ASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp GGGGGGSSEEEEESSCCB
T ss_pred HHhCCCCCEEeeeCCCCC
Confidence 11235666666653
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=3.3e-22 Score=203.91 Aligned_cols=154 Identities=16% Similarity=0.163 Sum_probs=121.0
Q ss_pred HHHHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccCh---------------HHHHHHHHHHHHHhcCC
Q 041034 443 EDLINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDS---------------AFVESFQNEARVLSTVR 507 (701)
Q Consensus 443 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~E~~~l~~l~ 507 (701)
..+......|.+.+.||+|+||.||+|...+|+.||+|+++....... .....+.+|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455667788899999999999999777799999999975432110 23567899999999999
Q ss_pred CCceeeeeeeeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEE
Q 041034 508 HRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNIL 587 (701)
Q Consensus 508 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIl 587 (701)
| +++.+++.. +..++||||+++++|.+ +.. .....++.|++.||.|||++ ||+||||||+||+
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 5 677765543 45699999999999988 422 12346999999999999999 9999999999999
Q ss_pred EcCCCCeEEEeecCccccccCCCCceeecccccccCCCCC
Q 041034 588 LNSNLEAFVADFGTARLLHVDSSNRTLRAGTYGYIAPDQR 627 (701)
Q Consensus 588 l~~~~~~kL~DFGla~~~~~~~~~~~~~~gt~~y~aPE~~ 627 (701)
++ ++.+||+|||+|+. +..|.|||.+
T Consensus 226 l~-~~~vkl~DFG~a~~-------------~~~~~a~e~l 251 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE-------------VGEEGWREIL 251 (282)
T ss_dssp EE-TTEEEECCCTTCEE-------------TTSTTHHHHH
T ss_pred EE-CCcEEEEECCCCeE-------------CCCCCHHHHH
Confidence 99 99999999999963 3346777764
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=2.5e-22 Score=223.38 Aligned_cols=189 Identities=24% Similarity=0.354 Sum_probs=105.5
Q ss_pred CCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEee
Q 041034 111 NLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLG 190 (701)
Q Consensus 111 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 190 (701)
+|+.|+|++|++++ +|..+ +++|++|+|++|+|+. +| .. +++|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~-ip---~~------------------------l~~L~~L~Ls 108 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALIS-LP---EL------------------------PASLEYLDAC 108 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSC-CC---CC------------------------CTTCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcc-cc---cc------------------------cCCCCEEEcc
Confidence 56666666666654 33333 2455555555555552 22 12 3445555555
Q ss_pred ecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCcccc
Q 041034 191 CNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGII 270 (701)
Q Consensus 191 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 270 (701)
+|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +
T Consensus 109 ~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 109 DNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp SSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-c
Confidence 555554 333 333 55555555555554 333 34566666666666665 333 34566666666666665 4
Q ss_pred CcccCCCCCCcEEEccCccCCCCCcccccCccce-------eeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCC
Q 041034 271 PDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNL-------VSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIP 343 (701)
Q Consensus 271 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 343 (701)
|. |. ++|+.|+|++|.|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 44 44 56666666666666 4444 433 45 77777777776 466666667777777777777776666
Q ss_pred cccccccc
Q 041034 344 PEIGKILL 351 (701)
Q Consensus 344 ~~~~~l~~ 351 (701)
..+..++.
T Consensus 248 ~~l~~l~~ 255 (571)
T 3cvr_A 248 ESLSQQTA 255 (571)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhc
Confidence 66665443
No 353
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.86 E-value=8.8e-25 Score=248.35 Aligned_cols=325 Identities=17% Similarity=0.157 Sum_probs=233.3
Q ss_pred CCEEEEEeccc-ccccccCCcccCCCCCCcEEECCCCcceeeCCccc----CCCCCCCEEECcCCc--Cccc-CCcccCC
Q 041034 37 GSITHIELVEC-SIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQI----GSLSNLKYLNLRWNN--LTGT-IPKEIGS 108 (701)
Q Consensus 37 ~~v~~l~l~~~-~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~----~~l~~L~~L~L~~n~--l~~~-~p~~~~~ 108 (701)
.++++|++.+| .++.......+..+++|++|+|++|.+++..+..+ ..+++|++|+|++|. ++.. ++..+.+
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~ 209 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTR 209 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHh
Confidence 47899999988 44432111223468999999999999887554433 467899999999997 3311 2222345
Q ss_pred CCCCCEEECCCC-CCCCCCccccCCccccceeeccccc--------------------------CCCC----CcccccCC
Q 041034 109 LRNLEVLYLSNN-SLHGTTPIEIGSLRNLEELYLRSNK--------------------------LSGV----LPQEIGNL 157 (701)
Q Consensus 109 l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~L~~n~--------------------------l~~~----~~~~~~~l 157 (701)
+++|++|+|++| .+.+ ++..+..+++|++|+++.+. +... ++..+..+
T Consensus 210 ~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~ 288 (594)
T 2p1m_B 210 CPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVC 288 (594)
T ss_dssp CTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHH
T ss_pred CCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhh
Confidence 799999999999 4443 66677788888888865542 2211 33333467
Q ss_pred CCCcEEEceecccCCCcCc-ccccccccceeEeeecccCCC-CCCCCCCccccCccccc---------cccccCCccccc
Q 041034 158 KSLIWLSVMYNTVGGPIPS-TLFRLTNLERLFLGCNQFNGT-IPREIGNLKNLTHLSII---------TNKLTGAIPSTL 226 (701)
Q Consensus 158 ~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~---------~N~l~~~~p~~l 226 (701)
++|+.|+|++|.+++.... .+..+++|+.|++++| ++.. ++.....+++|++|+++ .+.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 8999999999997654332 3567899999999988 4422 22223357889999883 456665433334
Q ss_pred c-CCCcccEEEeccCCCCCCCCcccC-CCCcccEEEcC--C----CCCccc-----cCcccCCCCCCcEEEccCccCCCC
Q 041034 227 G-HLTSLLYLDLSFNQLHSFIPLEIG-NFSALAELDLS--D----NKIRGI-----IPDELSKLSNLQYLNLSSNLLSGQ 293 (701)
Q Consensus 227 ~-~l~~L~~L~L~~N~l~~~~~~~~~-~~~~L~~L~L~--~----N~l~~~-----~p~~l~~l~~L~~L~L~~N~l~~~ 293 (701)
. .+++|++|+++.|.+++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++|+.|+|++ .+++.
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 3 489999999999999876555554 58999999999 4 666632 222366789999999987 77766
Q ss_pred CcccccC-ccceeeecCCCCcCCCCCCCcc-cCCCCCCeeeccCCccCCCCCc-cccccccCCeEEcccccCcc
Q 041034 294 IPFAIGK-LFNLVSLDLSKNKLSGSFPTGI-GNCTELQHLALNHNSLDGTIPP-EIGKILLLQNLDLSHNNLSG 364 (701)
Q Consensus 294 ~~~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~l~ls~N~l~g 364 (701)
.+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|++++|+++.
T Consensus 447 ~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 447 VFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 5666665 8899999999999986655555 6689999999999999654433 44568999999999999853
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=1.4e-21 Score=219.77 Aligned_cols=188 Identities=26% Similarity=0.387 Sum_probs=103.7
Q ss_pred CcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeeccc
Q 041034 64 LQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRS 143 (701)
Q Consensus 64 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 143 (701)
+..+.+..+.+....+ +..|++|+.|+|++|.+... | .|..+++|+.|+|++|++++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4445566666654433 45667777777777777643 3 46777777777777777776554 66777777777777
Q ss_pred ccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcc
Q 041034 144 NKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIP 223 (701)
Q Consensus 144 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 223 (701)
|.+++. ..+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|
T Consensus 97 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 777653 2455666666666666665542 2355555555555555555533 334444444444444444444333
Q ss_pred ccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCc
Q 041034 224 STLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIR 267 (701)
Q Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~ 267 (701)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 44444444444444444442 12344444444444444444
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=2.9e-21 Score=217.26 Aligned_cols=194 Identities=29% Similarity=0.388 Sum_probs=124.8
Q ss_pred CCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEc
Q 041034 86 SNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSV 165 (701)
Q Consensus 86 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 165 (701)
..+..+.++.+.+.+..+ +..+++|+.|+|++|.+... + .+..+++|+.|+|++|++++..| +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 345555666666665433 45566677777777776643 2 46667777777777777766544 666777777777
Q ss_pred eecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCC
Q 041034 166 MYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSF 245 (701)
Q Consensus 166 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 245 (701)
++|.+.+. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|++. ..+..+++|+.|+|++|+|++.
T Consensus 95 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 77776553 2566667777777777776643 3466667777777777777654 4566667777777777777665
Q ss_pred CCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCc
Q 041034 246 IPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIP 295 (701)
Q Consensus 246 ~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 295 (701)
.| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++...
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCC
T ss_pred hh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcc
Confidence 44 66677777777777777653 346667777777777777665433
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=2e-20 Score=185.01 Aligned_cols=159 Identities=28% Similarity=0.317 Sum_probs=110.0
Q ss_pred CCCCCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCccc
Q 041034 22 TSDHCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGT 101 (701)
Q Consensus 22 ~~d~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 101 (701)
+.+.|+|.+|.|...+ ++ .++. ...++|++|+|++|.|++..|..|..+++|++|+|++|+|+..
T Consensus 15 ~~~~Cs~~~v~c~~~~-----------l~-~ip~---~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKR-----------HA-SVPA---GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp TTCEEETTEEECTTSC-----------CS-SCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCEEeCCEeEccCCC-----------cC-ccCC---CCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 5678999999997432 21 1222 2236778888888888877777778888888888888888766
Q ss_pred CCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccc
Q 041034 102 IPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRL 181 (701)
Q Consensus 102 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 181 (701)
.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|.+++..+..|..+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 6666777888888888888887766666777777777777777777 455666666666666666666665555555556
Q ss_pred cccceeEeeecccCC
Q 041034 182 TNLERLFLGCNQFNG 196 (701)
Q Consensus 182 ~~L~~L~L~~N~l~~ 196 (701)
++|+.|+|++|.+.+
T Consensus 159 ~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 159 SSLTHAYLFGNPWDC 173 (229)
T ss_dssp TTCCEEECTTSCBCT
T ss_pred CCCCEEEeeCCCccC
Confidence 666666666665553
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=3.7e-21 Score=197.55 Aligned_cols=171 Identities=29% Similarity=0.406 Sum_probs=86.7
Q ss_pred CCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEE
Q 041034 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWL 163 (701)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 163 (701)
.+++|++|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. .
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~----------- 106 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--S----------- 106 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--G-----------
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--h-----------
Confidence 455555555555555533 2 25555555555555555554333 45555555555555555431 1
Q ss_pred EceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCC
Q 041034 164 SVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLH 243 (701)
Q Consensus 164 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 243 (701)
.+..+++|++|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|+++
T Consensus 107 -------------~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~ 169 (291)
T 1h6t_A 107 -------------SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 169 (291)
T ss_dssp -------------GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred -------------hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccc
Confidence 133444444444444444432 2344444555555555555433 34555555666666666555
Q ss_pred CCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCC
Q 041034 244 SFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSG 292 (701)
Q Consensus 244 ~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 292 (701)
+..+ +..+++|+.|+|++|.|++. | .+..+++|+.|++++|.++.
T Consensus 170 ~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 170 DIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred cchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 5433 55555666666666655542 2 25555556666666655553
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=1.3e-20 Score=185.09 Aligned_cols=156 Identities=20% Similarity=0.211 Sum_probs=107.0
Q ss_pred ccccccccccCCccccccCCCcccEEEeccCCCCCCCC-cccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCc
Q 041034 210 HLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIP-LEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSN 288 (701)
Q Consensus 210 ~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 288 (701)
.+++++|.++. +|..+. ..+++|+|++|+|++..+ ..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555542 343332 234566666666666533 34566677777777777777666666777777777777777
Q ss_pred cCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCC
Q 041034 289 LLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPM 368 (701)
Q Consensus 289 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 368 (701)
.+++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+++|.++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 77766666677777777777777777776677777777777777777777777777777777888888888888776664
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=2e-20 Score=183.73 Aligned_cols=155 Identities=23% Similarity=0.293 Sum_probs=109.2
Q ss_pred ccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCcc
Q 041034 210 HLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNL 289 (701)
Q Consensus 210 ~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 289 (701)
.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4555555555 3344333 456777777777776656667777777777777777776667777777777777777777
Q ss_pred CCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCC
Q 041034 290 LSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 290 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 367 (701)
|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..+
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 775555556777777777777777777777777777778888888888777666677777888888888888876654
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.1e-20 Score=200.34 Aligned_cols=180 Identities=24% Similarity=0.181 Sum_probs=133.5
Q ss_pred ceeEeeecccCCCCCCCCCCccccCccccccccccCCcccccc-CCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCC
Q 041034 185 ERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLG-HLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSD 263 (701)
Q Consensus 185 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~ 263 (701)
+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..+. .+++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777777776 3555443 3477778888887776666676 778888888888888877667777888888888888
Q ss_pred CCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcc---cCCCCCCeeeccCCccCC
Q 041034 264 NKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGI---GNCTELQHLALNHNSLDG 340 (701)
Q Consensus 264 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~ 340 (701)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+ ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 88877777777888888888888888887777778888888888888888875333333 567888888888888886
Q ss_pred CCCcccccccc--CCeEEcccccCcccCC
Q 041034 341 TIPPEIGKILL--LQNLDLSHNNLSGTIP 367 (701)
Q Consensus 341 ~~p~~~~~l~~--L~~l~ls~N~l~g~~p 367 (701)
..+..+..++. |+.|+|++|++.+...
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 55567777776 4788999998887654
No 361
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=9e-22 Score=227.00 Aligned_cols=258 Identities=22% Similarity=0.187 Sum_probs=102.0
Q ss_pred HHHHHHHhc------CCCCcCCCC--CCCCCCCCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCc
Q 041034 2 EIERQALLN------CGWWKDRIP--HNTSDHCNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNN 73 (701)
Q Consensus 2 ~~~~~~l~~------~~~~~~~~~--~~~~d~c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~ 73 (701)
+.+|++|+. +..|+...+ ...+..+.|.+++++. ++++.++|..+.+... + ...|+.++|+.|.
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-~------~~~l~~l~Ls~~~ 202 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEA-N------QALLQHKKLSQYS 202 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcc-h------hhHhhcCccCccc
Confidence 346777764 123444332 2334567898888874 5788888877776542 1 1234555666655
Q ss_pred ceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCccc
Q 041034 74 LSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQE 153 (701)
Q Consensus 74 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 153 (701)
|.+ ++++.|.+. ..|+.|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..
T Consensus 203 i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 265 (727)
T 4b8c_D 203 IDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAE 265 (727)
T ss_dssp ----------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGG
T ss_pred ccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChh
Confidence 542 244445554 55566666677777777777666 44445556667777777777776 55666
Q ss_pred ccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCc-c
Q 041034 154 IGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTS-L 232 (701)
Q Consensus 154 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~-L 232 (701)
|+++++|++|+|++|.|+ .+|..|.++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +
T Consensus 266 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~ 343 (727)
T 4b8c_D 266 IKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTG 343 (727)
T ss_dssp GGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHH
T ss_pred hhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhh
Confidence 677777777777777776 55666777777777777777776 55666777777777777777777777766654322 2
Q ss_pred cEEEeccCCCCCCCCcccCCCCcccEEEcCCC--------CCccccCcccCCCCCCcEEEccCccCCC
Q 041034 233 LYLDLSFNQLHSFIPLEIGNFSALAELDLSDN--------KIRGIIPDELSKLSNLQYLNLSSNLLSG 292 (701)
Q Consensus 233 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N--------~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 292 (701)
..|+|++|.+++.+|.. |+.|+++.| .+.+..+..+..+..+....+++|-+.+
T Consensus 344 ~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 344 LIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp HHHHHHHCCCCCCCCCC-----------------------------------------------CCCG
T ss_pred hHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 34667777777766643 445555555 3444444455566667777778887753
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.3e-20 Score=193.36 Aligned_cols=173 Identities=26% Similarity=0.341 Sum_probs=124.1
Q ss_pred cCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccc
Q 041034 58 FSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLE 137 (701)
Q Consensus 58 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 137 (701)
++.+++|+.|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCC
Confidence 45678899999999999854 3 48889999999999999997655 99999999999999999863 3489999999
Q ss_pred eeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCcccccccc
Q 041034 138 ELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNK 217 (701)
Q Consensus 138 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 217 (701)
+|+|++|++++. ..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|++++..+ +..+++|++|++++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 999999999874 4567777777777777777654 445566666666666666654433 5555555555555555
Q ss_pred ccCCccccccCCCcccEEEeccCCCCC
Q 041034 218 LTGAIPSTLGHLTSLLYLDLSFNQLHS 244 (701)
Q Consensus 218 l~~~~p~~l~~l~~L~~L~L~~N~l~~ 244 (701)
|++. | .+..+++|+.|++++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 5532 2 24445555555555555443
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.83 E-value=1.4e-22 Score=226.63 Aligned_cols=217 Identities=20% Similarity=0.162 Sum_probs=161.4
Q ss_pred CCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccce
Q 041034 107 GSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLER 186 (701)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 186 (701)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|......|.. +..+.+.+.+|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhccc
Confidence 45667777777777775 56667777777777777555421111110 1122245667778888888888
Q ss_pred eE-eeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCC
Q 041034 187 LF-LGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNK 265 (701)
Q Consensus 187 L~-L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~ 265 (701)
|+ ++.|.+ .+|..+.+++|.++...+ ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 88 677654 357778888888875433 248889999999988 565 8889999999999999
Q ss_pred CccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCC-CCcccCCCCCCeeeccCCccCCCCCc
Q 041034 266 IRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSF-PTGIGNCTELQHLALNHNSLDGTIPP 344 (701)
Q Consensus 266 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~ 344 (701)
|+ .+|..++.+++|+.|+|++|.|++ +| .++.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++..|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 98 778889999999999999999986 56 7888999999999999998776 88899999999999999999876553
Q ss_pred c---ccccccCCeEEc
Q 041034 345 E---IGKILLLQNLDL 357 (701)
Q Consensus 345 ~---~~~l~~L~~l~l 357 (701)
. +..+++|+.|++
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 344778888864
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=1.2e-20 Score=200.20 Aligned_cols=108 Identities=27% Similarity=0.254 Sum_probs=49.1
Q ss_pred CCEEECcCCcCcccCCcccC-CCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEce
Q 041034 88 LKYLNLRWNNLTGTIPKEIG-SLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVM 166 (701)
Q Consensus 88 L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 166 (701)
++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44455555554444444444 44455555555554444444444444444444444444444434344444444444444
Q ss_pred ecccCCCcCcccccccccceeEeeecccC
Q 041034 167 YNTVGGPIPSTLFRLTNLERLFLGCNQFN 195 (701)
Q Consensus 167 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 195 (701)
+|.+++..|..|..+++|+.|+|++|+|+
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 44443333334444444444444444444
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=6.8e-20 Score=181.15 Aligned_cols=155 Identities=25% Similarity=0.309 Sum_probs=97.1
Q ss_pred CccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCc
Q 041034 209 THLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSN 288 (701)
Q Consensus 209 ~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 288 (701)
+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34455555554 3333332 55666666666666655556666666666666666665555555566666666666666
Q ss_pred cCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCC
Q 041034 289 LLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 289 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 367 (701)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++|..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 666555555666666666666666666 566666667777777777777765555566667777777777777776654
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=5.1e-20 Score=180.80 Aligned_cols=134 Identities=22% Similarity=0.277 Sum_probs=93.0
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 56777777777777666667777777777777777777777777777777777777777777666666667777777777
Q ss_pred ccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccC
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 195 (701)
++|++++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 777777666666666666666666666666655555666666666666666554
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=6.5e-23 Score=229.36 Aligned_cols=218 Identities=21% Similarity=0.161 Sum_probs=148.7
Q ss_pred cCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCc
Q 041034 82 IGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLI 161 (701)
Q Consensus 82 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 161 (701)
+..+++|+.|+|++|+++ .+|+.++++++|+.|++++|......| ..+..+.+.+..|..++++++|+
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~-----------~ll~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTII-----------LLMRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHH-----------HHHHHHCTGGGHHHHHHHHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHH-----------HHHHhcccccCCHHHHHHHHhcc
Confidence 367899999999999998 789999999999999997765210011 01112233445566666666666
Q ss_pred EEE-ceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccC
Q 041034 162 WLS-VMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFN 240 (701)
Q Consensus 162 ~L~-L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N 240 (701)
.|+ ++.|.+ ..|+.+.+++|.++...+ ..|+.|+|++|+|++ +|. ++.+++|++|+|++|
T Consensus 413 ~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 413 AVDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HHCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cCcchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 665 444433 356666666666664322 136777777777775 455 777777777777777
Q ss_pred CCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCC-cccccCccceeeecCCCCcCCCCCC
Q 041034 241 QLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQI-PFAIGKLFNLVSLDLSKNKLSGSFP 319 (701)
Q Consensus 241 ~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p 319 (701)
+|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++|+.|+|++|.|++.. |..++.+++|+.|+|++|.+++..|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 777 467777777777777777777776 45 6777777777888777777665 7777777778888888887776544
Q ss_pred Cc---ccCCCCCCeeec
Q 041034 320 TG---IGNCTELQHLAL 333 (701)
Q Consensus 320 ~~---~~~l~~L~~L~L 333 (701)
.. +..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 22 223677777764
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=6.1e-20 Score=180.25 Aligned_cols=133 Identities=25% Similarity=0.264 Sum_probs=71.3
Q ss_pred CCcEEECCCCcceeeCC-cccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 63 NLQYLNLWNNNLSGSIP-PQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 63 ~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
.++.|+|++|.|++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 44556666666555433 23555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccC
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFN 195 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 195 (701)
++|++++..|..|.++++|+.|+|++|.+++..|..|..+++|+.|+|++|.+.
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 555555555555555555555555555554444444444444444444444444
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1.6e-20 Score=216.59 Aligned_cols=153 Identities=26% Similarity=0.304 Sum_probs=104.2
Q ss_pred cCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCC
Q 041034 174 IPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNF 253 (701)
Q Consensus 174 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 253 (701)
.+..+..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|.|+ .+|..|+.+
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 292 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC 292 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC
Confidence 3445556666666666666666 45555566777888888888877 67777888888888888888888 467778888
Q ss_pred CcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccc-eeeecCCCCcCCCCCCCcccCCCCCCeee
Q 041034 254 SALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFN-LVSLDLSKNKLSGSFPTGIGNCTELQHLA 332 (701)
Q Consensus 254 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 332 (701)
++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|.. |+.|+
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~ 365 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIE 365 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeE
Confidence 88888888888887 66777888888888888888888888877755432 234788888888887764 45566
Q ss_pred ccCC
Q 041034 333 LNHN 336 (701)
Q Consensus 333 L~~N 336 (701)
+++|
T Consensus 366 l~~n 369 (727)
T 4b8c_D 366 INTD 369 (727)
T ss_dssp ----
T ss_pred eecc
Confidence 6666
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=1e-20 Score=191.16 Aligned_cols=171 Identities=26% Similarity=0.336 Sum_probs=101.9
Q ss_pred CCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEE
Q 041034 84 SLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWL 163 (701)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 163 (701)
.+.+++.+++++|.+++.. .+..+++|++|++++|+++.. + .+..+++|++|+|++|++++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3556677777777777543 466777777777777777643 3 56667777777777777765544 5556666666
Q ss_pred EceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCC
Q 041034 164 SVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLH 243 (701)
Q Consensus 164 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 243 (701)
+|++|++++..+ +.. ++|++|+|++|++++. +.+..+++|++|+|++|+++
T Consensus 91 ~L~~N~l~~l~~--------------------------~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 91 SVNRNRLKNLNG--------------------------IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp ECCSSCCSCCTT--------------------------CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--------------------------ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCC
Confidence 655555544211 111 4455555555555532 23555566666666666665
Q ss_pred CCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCC
Q 041034 244 SFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQ 293 (701)
Q Consensus 244 ~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 293 (701)
+. + .+..+++|+.|+|++|+|++. ..+..+++|+.|++++|.+++.
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 53 2 455566666666666666654 4566666666666666666544
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.5e-19 Score=182.04 Aligned_cols=140 Identities=23% Similarity=0.273 Sum_probs=107.3
Q ss_pred CCccceEEeeccceEEEEEEc-CCCcE--EEEEEecCCCccC---------------------hHHHHHHHHHHHHHhcC
Q 041034 451 DFHIRYCIGTGGYGSVYKAEL-PDGKV--VALKKLHQSETED---------------------SAFVESFQNEARVLSTV 506 (701)
Q Consensus 451 ~y~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~---------------------~~~~~~~~~E~~~l~~l 506 (701)
-|++.+.||+|+||.||+|.. .+|+. ||||+++...... ......+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999976 67888 9999876542110 11124678999999999
Q ss_pred CCCce--eeeeeeeeeCcEEEEEEEccCC-C----CHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHh-cCCCCCeEe
Q 041034 507 RHRNI--VKLYGFCLHKRCMFFIYEYMER-G----SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLH-HDCTPSIVH 578 (701)
Q Consensus 507 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~~~givH 578 (701)
.|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +. ||+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88754 334432 346899999942 3 67666432 223456789999999999999 88 9999
Q ss_pred cCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 579 RDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 579 ~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999988 9999999999754
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=4.4e-20 Score=186.53 Aligned_cols=171 Identities=25% Similarity=0.304 Sum_probs=120.5
Q ss_pred CCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCcccccee
Q 041034 60 CFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL 139 (701)
Q Consensus 60 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 139 (701)
.+.++..+++++|.++... .+..+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3456778899999998654 58889999999999999984 45 78999999999999999997766 9999999999
Q ss_pred ecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCcccccccccc
Q 041034 140 YLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLT 219 (701)
Q Consensus 140 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 219 (701)
+|++|++++..+ +.. ++|+.|+|++|.+++. ..+..+++|+.|+|++|++++.
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~---------------------- 143 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI---------------------- 143 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC----------------------
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC----------------------
Confidence 999999997533 222 7777777777777653 2355555555555555555432
Q ss_pred CCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccc
Q 041034 220 GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGI 269 (701)
Q Consensus 220 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~ 269 (701)
+ .+..+++|++|+|++|++++. ..+..+++|+.|++++|.+++.
T Consensus 144 ---~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 ---V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ---G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ---h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 1 344455555555555555553 3455555555555555555543
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=7.5e-19 Score=169.40 Aligned_cols=152 Identities=18% Similarity=0.205 Sum_probs=77.5
Q ss_pred ccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEE
Q 041034 205 LKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLN 284 (701)
Q Consensus 205 l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 284 (701)
+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|+.|++++|++++..|..++.+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 344444444444444 222 34444555555555554432 12444555555555555555554555555555555555
Q ss_pred ccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCc
Q 041034 285 LSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLS 363 (701)
Q Consensus 285 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 363 (701)
+++|.+++..|..+..+++|+.|++++|.+.+.+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|++.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 55555555455555555555555555555222333 45555666666666666653 22 4555666666666666654
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=7e-19 Score=169.59 Aligned_cols=156 Identities=20% Similarity=0.260 Sum_probs=137.3
Q ss_pred ccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcc
Q 041034 177 TLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSAL 256 (701)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 256 (701)
....+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 4477899999999999998 555 68999999999999997763 3478999999999999999999888999999999
Q ss_pred cEEEcCCCCCccccCcccCCCCCCcEEEccCcc-CCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccC
Q 041034 257 AELDLSDNKIRGIIPDELSKLSNLQYLNLSSNL-LSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNH 335 (701)
Q Consensus 257 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 335 (701)
+.|+|++|++++..|..+..+++|+.|++++|. ++ .+| .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 999999999999888999999999999999998 65 555 68999999999999999996 44 789999999999999
Q ss_pred CccCC
Q 041034 336 NSLDG 340 (701)
Q Consensus 336 N~l~~ 340 (701)
|++.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 99864
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=6.9e-19 Score=168.84 Aligned_cols=132 Identities=24% Similarity=0.299 Sum_probs=77.4
Q ss_pred CccccccccccCCccccccCCCcccEEEeccCCCCCCCCc-ccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccC
Q 041034 209 THLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPL-EIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSS 287 (701)
Q Consensus 209 ~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 287 (701)
++|++++|+++ .+|..+.. +|++|+|++|+|++..+. .|..+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666664 44444432 566666666666654443 355666666666666666665566666666666666666
Q ss_pred ccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCC
Q 041034 288 NLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIP 343 (701)
Q Consensus 288 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 343 (701)
|+|++..+..|..+++|+.|+|++|+|++..|..+..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 66665555555556666666666666665555555555666666666665555433
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.6e-18 Score=166.33 Aligned_cols=130 Identities=30% Similarity=0.366 Sum_probs=67.1
Q ss_pred ceeEeeecccCCCCCCCCCCccccCccccccccccCCccc-cccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCC
Q 041034 185 ERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPS-TLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSD 263 (701)
Q Consensus 185 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~ 263 (701)
+.+++++|+++ .+|..+.. +|++|++++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 44555555553 33433322 455555555555544332 245555555555555555555455555555555555555
Q ss_pred CCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCC
Q 041034 264 NKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGS 317 (701)
Q Consensus 264 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 317 (701)
|+|++..|..|..+++|+.|+|++|+|++..|..+..+++|+.|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 555555555555555555555555555555555555555555555555555543
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.3e-18 Score=180.22 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=46.4
Q ss_pred CCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCc-EEEccCccCCCCCcccccCccceeee
Q 041034 229 LTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQ-YLNLSSNLLSGQIPFAIGKLFNLVSL 307 (701)
Q Consensus 229 l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L 307 (701)
+++|+.|+|++|+++.+.+..|.++++|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ .++...+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344555555554444444444444555555555444 4434444444444454 444444 3433333444444444444
Q ss_pred cCCCCcCCCCCCCcccCCCCCCee
Q 041034 308 DLSKNKLSGSFPTGIGNCTELQHL 331 (701)
Q Consensus 308 ~Ls~N~l~~~~p~~~~~l~~L~~L 331 (701)
++++|+++..-+.+|.++++|+.|
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEE
T ss_pred EeCCCccCccchhhhcCCcchhhh
Confidence 444444443333344444444443
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.6e-19 Score=187.41 Aligned_cols=283 Identities=13% Similarity=0.079 Sum_probs=181.6
Q ss_pred CCCCcEEECCCCcceeeCCcccCC-CCCCCEEECcCCcCc--ccCCcccCCCCCCCEEECCCCCCCCCCccccCC-----
Q 041034 61 FPNLQYLNLWNNNLSGSIPPQIGS-LSNLKYLNLRWNNLT--GTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS----- 132 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~----- 132 (701)
+++++.|.++++ +...-...+.. +++|++|||++|++. ...+..+ +.++.+.+..|.+ .+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhccccccc
Confidence 345667766543 21111112222 667777777777776 2222222 2244455555532 2344555
Q ss_pred ---ccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecc----cCCCCCCCCCCc
Q 041034 133 ---LRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQ----FNGTIPREIGNL 205 (701)
Q Consensus 133 ---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l 205 (701)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++.+|.+....+..|.++.++..+.++.+. ........|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 67777777776 6666666667777777777777776666666666666666555554421 122223334444
Q ss_pred cccC-ccccccccccCCccccc----cCCCcccEEEeccCCCCCCCCccc-CCCCcccEEEcCCCCCccccCcccCCCCC
Q 041034 206 KNLT-HLSIITNKLTGAIPSTL----GHLTSLLYLDLSFNQLHSFIPLEI-GNFSALAELDLSDNKIRGIIPDELSKLSN 279 (701)
Q Consensus 206 ~~L~-~L~l~~N~l~~~~p~~l----~~l~~L~~L~L~~N~l~~~~~~~~-~~~~~L~~L~L~~N~l~~~~p~~l~~l~~ 279 (701)
..|+ .+.+.... .++..+ ....++..+.+.++-... ....+ ..+++|+.|+|++|+++.+.+.+|.++++
T Consensus 176 ~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~-~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~ 251 (329)
T 3sb4_A 176 EPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNA-DFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY 251 (329)
T ss_dssp CCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHH-HHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT
T ss_pred cccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHH-HHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC
Confidence 4444 22222211 111111 134566777776653221 11111 23789999999999999888889999999
Q ss_pred CcEEEccCccCCCCCcccccCcccee-eecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEc
Q 041034 280 LQYLNLSSNLLSGQIPFAIGKLFNLV-SLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDL 357 (701)
Q Consensus 280 L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l 357 (701)
|+.|+|.+| ++...+.+|.++.+|+ .|++.+ .++..-+.+|.+|++|+.|++++|+++..-+..|.++++|+.++.
T Consensus 252 L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 252 LLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999998 8767778899999999 999998 787667789999999999999999999777789999999999874
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.72 E-value=1.9e-16 Score=169.32 Aligned_cols=270 Identities=9% Similarity=0.026 Sum_probs=139.0
Q ss_pred CCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceee
Q 041034 61 FPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELY 140 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 140 (701)
+..++.+.+.+ .++.+...+|.+. +|+.++|..| ++.+...+|.+ .+|+.+.|.+ .++.+.+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35566666643 3444555566654 5777776655 55555556666 3577777764 55555556666666677777
Q ss_pred cccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccC
Q 041034 141 LRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTG 220 (701)
Q Consensus 141 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 220 (701)
|.+|+++.+...+|. ..+|+.+.|..+ +......+|.++++|+.++|..| ++.....+|.+ .+|+.+.+ .|.++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 666666655555555 356666666532 44444555556666666665543 33333444444 45555555 333443
Q ss_pred CccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccC
Q 041034 221 AIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGK 300 (701)
Q Consensus 221 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 300 (701)
..+.+|.++++|+.+++.+|.+.. +.+..+.+.+|.++++|+.++|. |.++.....+|.+
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~ 321 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGG 321 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTT
T ss_pred EChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcC
Confidence 444455555555555555544430 00002333444445555555554 2244333344444
Q ss_pred ccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccc-cCCeEEcccccC
Q 041034 301 LFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKIL-LLQNLDLSHNNL 362 (701)
Q Consensus 301 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~ls~N~l 362 (701)
+.+|+.|+|..| ++..-+.+|.++ +|+.|++++|.+....+..|..++ .++.|++..|.+
T Consensus 322 c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 322 NRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred CCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 555555555332 333334445555 555555555555433344444442 455555555443
No 380
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70 E-value=8.7e-18 Score=175.45 Aligned_cols=142 Identities=11% Similarity=0.124 Sum_probs=100.8
Q ss_pred cCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCcc--------------C-hHH----HHHHHHHHHHHhcCCCCc
Q 041034 450 EDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETE--------------D-SAF----VESFQNEARVLSTVRHRN 510 (701)
Q Consensus 450 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~-~~~----~~~~~~E~~~l~~l~h~n 510 (701)
.=|++...||+|++|.||+|...+|+.||||+++..... . ... .-...+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 349999999999999999999889999999987643211 0 000 111234666666664443
Q ss_pred eeeeeeeeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcC
Q 041034 511 IVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNS 590 (701)
Q Consensus 511 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~ 590 (701)
+....-+... ..++||||++|++|.++... .....++.|++.+|.|||++ |||||||||.|||+++
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 3221111111 23699999999888654321 12356889999999999999 9999999999999987
Q ss_pred CC----------CeEEEeecCcccc
Q 041034 591 NL----------EAFVADFGTARLL 605 (701)
Q Consensus 591 ~~----------~~kL~DFGla~~~ 605 (701)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999988654
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=2.7e-17 Score=154.06 Aligned_cols=133 Identities=25% Similarity=0.205 Sum_probs=83.2
Q ss_pred CCCCcEEECCCCcce-eeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCcccccee
Q 041034 61 FPNLQYLNLWNNNLS-GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL 139 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 139 (701)
.++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 356777777777776 56666667777777777777777654 566667777777777777766566666666677777
Q ss_pred ecccccCCCCC-cccccCCCCCcEEEceecccCCCcC---cccccccccceeEeeecccC
Q 041034 140 YLRSNKLSGVL-PQEIGNLKSLIWLSVMYNTVGGPIP---STLFRLTNLERLFLGCNQFN 195 (701)
Q Consensus 140 ~L~~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~ 195 (701)
+|++|++++.. +..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777666542 2455555555555555555554433 34455555555555555544
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=1.4e-16 Score=150.59 Aligned_cols=134 Identities=24% Similarity=0.262 Sum_probs=95.6
Q ss_pred CCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcc
Q 041034 26 CNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKE 105 (701)
Q Consensus 26 c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 105 (701)
|.|.++.|+.. +++. ++ ....++|+.|++++|++++..+..|+.+++|++|+|++|++++..+..
T Consensus 7 C~~~~l~~~~~-----------~l~~-~p---~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSK-----------GLTS-VP---TGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSS-----------CCSS-CC---TTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCC-----------CCcc-CC---CCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 67888887633 2221 21 223467788888888887666666777888888888888887766667
Q ss_pred cCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCc
Q 041034 106 IGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPI 174 (701)
Q Consensus 106 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 174 (701)
|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.+..
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 778888888888888887777667777778888888888777666666677777777777777666544
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.69 E-value=4.7e-16 Score=166.31 Aligned_cols=228 Identities=12% Similarity=0.066 Sum_probs=174.6
Q ss_pred cCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCC
Q 041034 53 LGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGS 132 (701)
Q Consensus 53 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 132 (701)
++...|... +|+.+.+..+ ++.+...+|.+. +|+.++|.. .++.+.+.+|.++++|+.++|++|+++.+....|.
T Consensus 127 I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~- 201 (401)
T 4fdw_A 127 IPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV- 201 (401)
T ss_dssp ECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-
T ss_pred ehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-
Confidence 455567774 7999999876 777777888885 799999986 78778888999999999999999999977777777
Q ss_pred ccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccc
Q 041034 133 LRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLS 212 (701)
Q Consensus 133 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 212 (701)
.++|+.+.|..+ +..+...+|.++++|+.+.+..| ++.....+|.+ ++|+.+.| .|.++.....+|.++++|+.+.
T Consensus 202 ~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~ 277 (401)
T 4fdw_A 202 YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVT 277 (401)
T ss_dssp TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEE
T ss_pred ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEE
Confidence 589999999854 88788899999999999999875 66566667777 89999999 5667767788999999999999
Q ss_pred ccccccc-----CCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccC
Q 041034 213 IITNKLT-----GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSS 287 (701)
Q Consensus 213 l~~N~l~-----~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 287 (701)
+.+|.+. ...+.+|.+|++|+.++|. +.++.+...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++
T Consensus 278 l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~ 354 (401)
T 4fdw_A 278 TYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEG 354 (401)
T ss_dssp EESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECC
T ss_pred eCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcC
Confidence 9998775 3445566666667776666 3455555556666666666666433 444555556665 666666666
Q ss_pred ccCCC
Q 041034 288 NLLSG 292 (701)
Q Consensus 288 N~l~~ 292 (701)
|.+..
T Consensus 355 n~~~~ 359 (401)
T 4fdw_A 355 TTPPQ 359 (401)
T ss_dssp SSCCB
T ss_pred CCCcc
Confidence 55543
No 384
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=6.6e-17 Score=151.39 Aligned_cols=132 Identities=21% Similarity=0.218 Sum_probs=68.7
Q ss_pred CCCcEEEceecccC-CCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEE
Q 041034 158 KSLIWLSVMYNTVG-GPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLD 236 (701)
Q Consensus 158 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 236 (701)
++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 44455555555666666666655543 4455555555555555555554555555555555555
Q ss_pred eccCCCCCCCC-cccCCCCcccEEEcCCCCCccccC---cccCCCCCCcEEEccCccCC
Q 041034 237 LSFNQLHSFIP-LEIGNFSALAELDLSDNKIRGIIP---DELSKLSNLQYLNLSSNLLS 291 (701)
Q Consensus 237 L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~ 291 (701)
|++|++++..+ ..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555555311 344455555555555555553333 24444555555555555444
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=2.2e-16 Score=149.18 Aligned_cols=133 Identities=27% Similarity=0.277 Sum_probs=80.4
Q ss_pred ccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCC
Q 041034 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSK 311 (701)
Q Consensus 232 L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 311 (701)
.+.+++++|+++. +|..+ .++|+.|++++|++++..+..|..+++|+.|++++|.+++..+..+..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3455555555554 23222 24566666666666655555556666666666666666655555556666666666666
Q ss_pred CcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCC
Q 041034 312 NKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 312 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 367 (701)
|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|+++|.+|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 66665555556666666666776666665444445666677777777777766555
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=1.7e-16 Score=152.03 Aligned_cols=132 Identities=25% Similarity=0.309 Sum_probs=93.9
Q ss_pred cEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCC
Q 041034 233 LYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKN 312 (701)
Q Consensus 233 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 312 (701)
+++++++|.++. +|..+ .++|+.|+|++|+|+ .+|..|..+++|+.|+|++|.|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~~-ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCc-CCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 456666666665 44433 246777777777776 45666777777777777777777666667777777777777777
Q ss_pred cCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCCC
Q 041034 313 KLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIPM 368 (701)
Q Consensus 313 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 368 (701)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+....
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 77766666777777888888888888765555677788888888888888776553
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=3.7e-17 Score=149.79 Aligned_cols=128 Identities=22% Similarity=0.206 Sum_probs=88.8
Q ss_pred CCCCcEEECCCCcce-eeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCcccccee
Q 041034 61 FPNLQYLNLWNNNLS-GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEEL 139 (701)
Q Consensus 61 ~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 139 (701)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 366777788887777 66777777777778888877777755 567777777777777777776666666677777777
Q ss_pred ecccccCCCC-CcccccCCCCCcEEEceecccCCCcC---cccccccccceeEee
Q 041034 140 YLRSNKLSGV-LPQEIGNLKSLIWLSVMYNTVGGPIP---STLFRLTNLERLFLG 190 (701)
Q Consensus 140 ~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~ 190 (701)
+|++|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777753 33566666666666666666655544 345556666666554
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=6.4e-17 Score=148.23 Aligned_cols=127 Identities=24% Similarity=0.201 Sum_probs=88.3
Q ss_pred CcccEEEeccCCCC-CCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeec
Q 041034 230 TSLLYLDLSFNQLH-SFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLD 308 (701)
Q Consensus 230 ~~L~~L~L~~N~l~-~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 308 (701)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55667777777766 45666666677777777777777655 5566777777777777777766666666677777777
Q ss_pred CCCCcCCCC-CCCcccCCCCCCeeeccCCccCCCCC---ccccccccCCeEEcc
Q 041034 309 LSKNKLSGS-FPTGIGNCTELQHLALNHNSLDGTIP---PEIGKILLLQNLDLS 358 (701)
Q Consensus 309 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~ls 358 (701)
+++|.+++. .|..+..+++|++|++++|++++..+ ..++.+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777652 33667777777777777777776554 467777777777765
No 389
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.5e-16 Score=150.97 Aligned_cols=108 Identities=23% Similarity=0.332 Sum_probs=52.0
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
++|++|+|++|.|+ .+|..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 34455555555554 33444445555555555555555444444555555555555555555444444444444555555
Q ss_pred ccccCCCCCcccccCCCCCcEEEceeccc
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTV 170 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 170 (701)
++|+++...+..|..+++|+.|+|++|.+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 54444444444444444444444444444
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=1.3e-17 Score=160.84 Aligned_cols=153 Identities=22% Similarity=0.287 Sum_probs=88.5
Q ss_pred CccccceeecccccCCCCCcc------cccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCc
Q 041034 132 SLRNLEELYLRSNKLSGVLPQ------EIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNL 205 (701)
Q Consensus 132 ~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 205 (701)
....++.++++.|.+++..|. .|..+++|++|++++|.+++ +| .+..+++|+.|++++|+++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555555555555555444 55556666666666666655 33 5666666666666666665 445555555
Q ss_pred cccCccccccccccCCccccccCCCcccEEEeccCCCCCCCC-cccCCCCcccEEEcCCCCCccccCcc----------c
Q 041034 206 KNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIP-LEIGNFSALAELDLSDNKIRGIIPDE----------L 274 (701)
Q Consensus 206 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~----------l 274 (701)
++|++|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+++..|.. +
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 666666666666664 33 45666666666666666665322 34566666666666666666554432 4
Q ss_pred CCCCCCcEEEccCccCC
Q 041034 275 SKLSNLQYLNLSSNLLS 291 (701)
Q Consensus 275 ~~l~~L~~L~L~~N~l~ 291 (701)
..+++|+.|+ +|.++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 5555666554 44444
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=7.9e-18 Score=162.33 Aligned_cols=133 Identities=21% Similarity=0.267 Sum_probs=68.7
Q ss_pred CCCCCCEEECcCCcCcccCCc------ccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCC
Q 041034 84 SLSNLKYLNLRWNNLTGTIPK------EIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNL 157 (701)
Q Consensus 84 ~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 157 (701)
....++.++++.+.++|..|. .|..+++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555555555555555544 55566666666666666654 33 5555666666666666655 334444444
Q ss_pred CCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCC-CCCCCccccCccccccccccCC
Q 041034 158 KSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIP-REIGNLKNLTHLSIITNKLTGA 221 (701)
Q Consensus 158 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~ 221 (701)
++|++|++++|.+++. | .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++.
T Consensus 93 ~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 93 DTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 5555555555555442 2 34455555555555555543211 2344444455555555544443
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1.8e-15 Score=142.71 Aligned_cols=132 Identities=22% Similarity=0.214 Sum_probs=92.7
Q ss_pred ccCCCcccEEEeccCCCCCCCCcccCCC-CcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccce
Q 041034 226 LGHLTSLLYLDLSFNQLHSFIPLEIGNF-SALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNL 304 (701)
Q Consensus 226 l~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 304 (701)
+..+++|+.|++++|+++.. |. +..+ ++|+.|+|++|.|++. ..+..+++|+.|+|++|.+++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 45566777777777777753 43 3333 3777777777777754 467777777777777777775544445777777
Q ss_pred eeecCCCCcCCCCCCC--cccCCCCCCeeeccCCccCCCCCcc----ccccccCCeEEcccccCc
Q 041034 305 VSLDLSKNKLSGSFPT--GIGNCTELQHLALNHNSLDGTIPPE----IGKILLLQNLDLSHNNLS 363 (701)
Q Consensus 305 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~l~ls~N~l~ 363 (701)
+.|+|++|+++ .+|. .+..+++|+.|++++|+++ .+|.. ++.+++|+.||+++|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 4555 6777788888888888887 45553 778888888888887764
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2.5e-15 Score=141.81 Aligned_cols=109 Identities=24% Similarity=0.305 Sum_probs=57.4
Q ss_pred cCCCCCCcEEECCCCcceeeCCcccCCCC-CCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCcccc
Q 041034 58 FSCFPNLQYLNLWNNNLSGSIPPQIGSLS-NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNL 136 (701)
Q Consensus 58 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 136 (701)
+..+++|+.|++++|.++. +|. +..+. +|++|+|++|.+++. +.|..+++|++|+|++|++++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 3445556666666666653 233 33333 666666666666644 455566666666666666654444444555566
Q ss_pred ceeecccccCCCCCcc--cccCCCCCcEEEceecccC
Q 041034 137 EELYLRSNKLSGVLPQ--EIGNLKSLIWLSVMYNTVG 171 (701)
Q Consensus 137 ~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~ 171 (701)
++|+|++|+++. +|. .+..+++|+.|++++|.++
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC
Confidence 666666665543 222 4444444444444444443
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=1.4e-13 Score=147.58 Aligned_cols=295 Identities=13% Similarity=0.033 Sum_probs=177.1
Q ss_pred ccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccC
Q 041034 52 ELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIG 131 (701)
Q Consensus 52 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 131 (701)
.++...|..+.+|+.+.|.. .++.+...+|.++++|+.++|..+ ++.+...+|.++++|+.+.+..+ +......+|.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeee
Confidence 36677899999999999975 477677788999999999999765 66566778999999998887654 4334444555
Q ss_pred CccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCcc
Q 041034 132 SLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHL 211 (701)
Q Consensus 132 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 211 (701)
+...++....... ......+|.++++|+.+.+..+ +.......|.++++|+.+.+..| ++.....+|.++..|+.+
T Consensus 138 ~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i 213 (394)
T 4fs7_A 138 GCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENM 213 (394)
T ss_dssp TCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBC
T ss_pred cccccccccCccc--cccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhcccccccee
Confidence 5543333322222 2233456666666776666543 23344455666666666666554 333444556666666665
Q ss_pred cccccccc---------------------CCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCcccc
Q 041034 212 SIITNKLT---------------------GAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGII 270 (701)
Q Consensus 212 ~l~~N~l~---------------------~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~ 270 (701)
.+..+... ......+..+.+|+.+.+..+.. ......|..+..++.+....+.+.
T Consensus 214 ~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~--- 289 (394)
T 4fs7_A 214 EFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP--- 289 (394)
T ss_dssp CCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---
T ss_pred ecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeec---
Confidence 55444321 12223344455555555554432 223344555555555555444322
Q ss_pred CcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccc
Q 041034 271 PDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKIL 350 (701)
Q Consensus 271 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 350 (701)
...|..+.+|+.+.+.++ ++.....+|.++.+|+.++|.++ ++..-..+|.++++|+.+++..| ++..-..+|.++.
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 235666667777777554 44344556667777777777543 55344556777777777777665 5544455677777
Q ss_pred cCCeEEcccc
Q 041034 351 LLQNLDLSHN 360 (701)
Q Consensus 351 ~L~~l~ls~N 360 (701)
+|+.+++..+
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 7777776543
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=1.9e-13 Score=146.39 Aligned_cols=301 Identities=14% Similarity=0.113 Sum_probs=218.6
Q ss_pred CEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCc--------------------
Q 041034 38 SITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNN-------------------- 97 (701)
Q Consensus 38 ~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-------------------- 97 (701)
.++++.+.. +++ .++...|..+++|+.++|.++ ++.+...+|.++++|+.+.+..+-
T Consensus 72 ~L~~i~lp~-~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~ 148 (394)
T 4fs7_A 72 KVTEIKIPS-TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPE 148 (394)
T ss_dssp TEEEEECCT-TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCT
T ss_pred CceEEEeCC-Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCc
Confidence 577777753 344 567778999999999999765 666677789999988887775431
Q ss_pred -CcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCc
Q 041034 98 -LTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPS 176 (701)
Q Consensus 98 -l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 176 (701)
+..+...+|.++++|+.+.+.++- ..+....|.++++|+.+.+..| +..+...+|.+...|+.+.+..+.. .+..
T Consensus 149 ~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~--~i~~ 224 (394)
T 4fs7_A 149 GVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY--YLGD 224 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC--EECT
T ss_pred cccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCce--Eeeh
Confidence 111223456677777777776543 3355566777777777777665 5555566777777777776655433 1223
Q ss_pred ccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcc
Q 041034 177 TLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSAL 256 (701)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L 256 (701)
.+...++|+.+.+..+ ++......+..+..|+.+.+..+... .....|..+..++.+....+.+. ...|..+.+|
T Consensus 225 ~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L 299 (394)
T 4fs7_A 225 FALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSL 299 (394)
T ss_dssp TTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTC
T ss_pred hhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccc
Confidence 3444567777777543 33344567888889999999877554 66678889999999998877643 3568889999
Q ss_pred cEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCC
Q 041034 257 AELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHN 336 (701)
Q Consensus 257 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 336 (701)
+.+.+.++ ++.+...+|.++++|+.++|.++ ++.....+|.++.+|+.+++..| ++..-..+|.++++|+.+++..+
T Consensus 300 ~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 300 TEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 99999865 67677788999999999999755 76566778999999999999877 76566778999999999999865
Q ss_pred ccCCCCCccccccccCCeE
Q 041034 337 SLDGTIPPEIGKILLLQNL 355 (701)
Q Consensus 337 ~l~~~~p~~~~~l~~L~~l 355 (701)
++ .+...|.++++|+.+
T Consensus 377 -~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 377 -LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp -GG-GGGGGBCTTCEEEEE
T ss_pred -CE-EhhheecCCCCCcEE
Confidence 33 345677777777754
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=4.1e-14 Score=132.44 Aligned_cols=105 Identities=30% Similarity=0.312 Sum_probs=56.9
Q ss_pred ccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCC
Q 041034 232 LLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSK 311 (701)
Q Consensus 232 L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 311 (701)
.+.+++++|.++. +|..+ .++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4556666666655 34333 25556666666666655555555555555555555555544444445555555555555
Q ss_pred CcCCCCCCCcccCCCCCCeeeccCCccC
Q 041034 312 NKLSGSFPTGIGNCTELQHLALNHNSLD 339 (701)
Q Consensus 312 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 339 (701)
|+|++..+..|..+++|++|+|++|+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5555444444555555555555555554
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=5.4e-14 Score=131.64 Aligned_cols=105 Identities=26% Similarity=0.278 Sum_probs=64.7
Q ss_pred EEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeeccccc
Q 041034 66 YLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNK 145 (701)
Q Consensus 66 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 145 (701)
.|++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 45555555552 444332 566666666666666666666666666666666666666555556666666666666666
Q ss_pred CCCCCcccccCCCCCcEEEceecccCCC
Q 041034 146 LSGVLPQEIGNLKSLIWLSVMYNTVGGP 173 (701)
Q Consensus 146 l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 173 (701)
|++..+..|.++++|+.|+|++|.+...
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 6665555566666666666666665543
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=9.9e-14 Score=130.30 Aligned_cols=104 Identities=29% Similarity=0.336 Sum_probs=68.5
Q ss_pred EEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeeccccc
Q 041034 66 YLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNK 145 (701)
Q Consensus 66 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 145 (701)
.+++++|++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666664 4555443 667777777777776666677777777777777777776655556667777777777777
Q ss_pred CCCCCcccccCCCCCcEEEceecccCC
Q 041034 146 LSGVLPQEIGNLKSLIWLSVMYNTVGG 172 (701)
Q Consensus 146 l~~~~~~~~~~l~~L~~L~L~~N~l~~ 172 (701)
|++..+..|..+++|+.|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 766555556666666666666666654
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.4e-13 Score=129.38 Aligned_cols=104 Identities=30% Similarity=0.343 Sum_probs=61.0
Q ss_pred cEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCC
Q 041034 233 LYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKN 312 (701)
Q Consensus 233 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 312 (701)
+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 566666666654 444432 56666666666666666666666666666666666666544444555566666666666
Q ss_pred cCCCCCCCcccCCCCCCeeeccCCccC
Q 041034 313 KLSGSFPTGIGNCTELQHLALNHNSLD 339 (701)
Q Consensus 313 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 339 (701)
+|++..+..|..+++|++|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 665443334555555555555555555
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.39 E-value=6.3e-12 Score=134.59 Aligned_cols=299 Identities=11% Similarity=0.120 Sum_probs=195.1
Q ss_pred ccCCcccCCCC-CCcEEECCCCcceeeCCcccCCCCCCCEEECcCCc---CcccCCcccCCCCCCCEEECCCCCCCCCCc
Q 041034 52 ELGSLNFSCFP-NLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNN---LTGTIPKEIGSLRNLEVLYLSNNSLHGTTP 127 (701)
Q Consensus 52 ~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 127 (701)
.++...|..+. .|+.+.+..+ ++.+...+|.++++|+.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++.+..
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 35666787764 5999999754 777778889999999999998764 66566778888999998888755 555666
Q ss_pred cccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccc
Q 041034 128 IEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKN 207 (701)
Q Consensus 128 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 207 (701)
..|..+.+|+.+.+..+ +..+...+|.+..+|+.+.+..+ +.......|. ..+|+.+.+..+-.. ....+|..+.+
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~ 206 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFA 206 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTT
T ss_pred hhhhhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccc
Confidence 78888999999998754 44466678888888998888655 4333344444 467888887654332 44556666666
Q ss_pred cCccccccccccCCcccc--------------ccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcc
Q 041034 208 LTHLSIITNKLTGAIPST--------------LGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDE 273 (701)
Q Consensus 208 L~~L~l~~N~l~~~~p~~--------------l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~ 273 (701)
++......+..... ... +.....+..+.+. +.+..+...+|.++..|+.+.+.++..+ +...+
T Consensus 207 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~a 283 (394)
T 4gt6_A 207 LSTITSDSESYPAI-DNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGA 283 (394)
T ss_dssp CCEEEECCSSSCBS-SSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTT
T ss_pred cceecccccccccc-cceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcc
Confidence 66665554433211 111 1111223333332 2233333456677777777777655443 55566
Q ss_pred cCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCC
Q 041034 274 LSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQ 353 (701)
Q Consensus 274 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 353 (701)
|.++++|+.+.+. +.++.....+|.++.+|+.++|..+ ++..-..+|.+|++|+.+.|..+ ++..-..+|.++++|+
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALN 360 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCC
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCC
Confidence 7777777777775 4455445566777777777777654 54344566777777777777644 5544456677777777
Q ss_pred eEEcccccC
Q 041034 354 NLDLSHNNL 362 (701)
Q Consensus 354 ~l~ls~N~l 362 (701)
.+++.+|..
T Consensus 361 ~i~~~~~~~ 369 (394)
T 4gt6_A 361 NIEYSGSRS 369 (394)
T ss_dssp EEEESSCHH
T ss_pred EEEECCcee
Confidence 777777643
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=4.5e-15 Score=157.10 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=20.6
Q ss_pred CCCCEEECCCCCCCCCCccccCCc-----cccceeecccccCC
Q 041034 110 RNLEVLYLSNNSLHGTTPIEIGSL-----RNLEELYLRSNKLS 147 (701)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~L~~n~l~ 147 (701)
++|+.|+|++|.++......+... ++|++|+|++|.++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~ 114 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLD 114 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCC
Confidence 556677777777664333333222 45556666655554
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.3e-12 Score=137.51 Aligned_cols=108 Identities=25% Similarity=0.280 Sum_probs=58.0
Q ss_pred CCcceeEeCCCCCEEEEEecccccccccCCcccCCCCCCcEEECCC-CcceeeCCcccCCCCCCCEEECcCCcCcccCCc
Q 041034 26 CNWVGITCDYKGSITHIELVECSIKGELGSLNFSCFPNLQYLNLWN-NNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPK 104 (701)
Q Consensus 26 c~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~ 104 (701)
|.|..|.|...+ ++++ +|. +..+++|+.|+|++ |.|++..+..|+.|++|++|+|++|+|++..|.
T Consensus 8 C~~~~v~~~~~n----------~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCTRDG----------ALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECCSSC----------CCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcCCCC----------CCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 777777665321 2332 333 44555555555553 555555555555555555555555555555555
Q ss_pred ccCCCCCCCEEECCCCCCCCCCccccCCccccceeecccccCC
Q 041034 105 EIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNKLS 147 (701)
Q Consensus 105 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 147 (701)
.|.+|++|++|+|++|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555555555555555555544444444443 555555555544
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=4e-15 Score=157.53 Aligned_cols=65 Identities=22% Similarity=0.171 Sum_probs=42.3
Q ss_pred CCCCCEEECcCCcCcccCCcccCC-----CCCCCEEECCCCCCCCCCcccc-CCccccceeecccccCCCC
Q 041034 85 LSNLKYLNLRWNNLTGTIPKEIGS-----LRNLEVLYLSNNSLHGTTPIEI-GSLRNLEELYLRSNKLSGV 149 (701)
Q Consensus 85 l~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~ 149 (701)
+++|++|+|++|.++......+.. .++|++|+|++|.++......+ ..+++|++|+|++|+++..
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~ 141 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPE 141 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHH
Confidence 356888888888887544333322 2688888888888865433333 2456677777777776543
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.34 E-value=1.6e-12 Score=136.63 Aligned_cols=131 Identities=20% Similarity=0.123 Sum_probs=61.6
Q ss_pred EEeccC-CCCCCCCcccCCCCcccEEEcCC-CCCccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCC
Q 041034 235 LDLSFN-QLHSFIPLEIGNFSALAELDLSD-NKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKN 312 (701)
Q Consensus 235 L~L~~N-~l~~~~~~~~~~~~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 312 (701)
++++++ +|++ +|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 4444 333 44555555555553 5555444445555555555555555555555555555555555555555
Q ss_pred cCCCCCCCcccCCCCCCeeeccCCccCCCCC-ccccccccCCeEEcccccCcccCCC
Q 041034 313 KLSGSFPTGIGNCTELQHLALNHNSLDGTIP-PEIGKILLLQNLDLSHNNLSGTIPM 368 (701)
Q Consensus 313 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~g~~p~ 368 (701)
+|++..+..+..++ |+.|+|++|++...-. .+|..........+..+++++.-|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 55533333333333 5555555555553211 1222222222333444555555444
No 405
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.33 E-value=2.5e-12 Score=129.47 Aligned_cols=148 Identities=14% Similarity=0.080 Sum_probs=114.9
Q ss_pred HHhhhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeeeCcE
Q 041034 445 LINATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLHKRC 523 (701)
Q Consensus 445 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 523 (701)
+......|.+...++.|+.+.||++... ++.+++|+........ ...+.+|+.+++.+. +..++++++++.+.+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 3445578988888998999999999764 6889999987532111 135788999998884 6778899999998899
Q ss_pred EEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------
Q 041034 524 MFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC------------------------------- 572 (701)
Q Consensus 524 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------- 572 (701)
.|+||||++|.++.+.+.. ......++.+++++|+.||+..
T Consensus 85 ~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred eEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 9999999999999876321 1123468899999999999810
Q ss_pred -------------------------CCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 573 -------------------------TPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 573 -------------------------~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998765567999998753
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.31 E-value=6.8e-11 Score=126.52 Aligned_cols=279 Identities=9% Similarity=0.070 Sum_probs=206.7
Q ss_pred ceeeCCcccCCCC-CCCEEECcCCcCcccCCcccCCCCCCCEEECCCCC---CCCCCccccCCccccceeecccccCCCC
Q 041034 74 LSGSIPPQIGSLS-NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNS---LHGTTPIEIGSLRNLEELYLRSNKLSGV 149 (701)
Q Consensus 74 l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 149 (701)
++.+...+|.++. .|+.+.+-.+ ++.+-..+|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 4455667788874 6999999754 776778899999999999998874 66666788999999999988765 5667
Q ss_pred CcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCC
Q 041034 150 LPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHL 229 (701)
Q Consensus 150 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 229 (701)
...+|.+..+|+.+.+..+ +.......|..+.+|+.+.+..+ ++.....+|.. ..|+.+.+..+-.. ....+|..+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c 204 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSEC 204 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTC
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhc
Confidence 7788999999999999743 44555678889999999999765 44344556654 57888888765433 556778888
Q ss_pred CcccEEEeccCCCCCCCCcc-------------cCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCccCCCCCcc
Q 041034 230 TSLLYLDLSFNQLHSFIPLE-------------IGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNLLSGQIPF 296 (701)
Q Consensus 230 ~~L~~L~L~~N~l~~~~~~~-------------~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 296 (701)
.++.......+......-.. +.....+..+.+. +.+..+...+|.++.+|+.+.+.++..+ ....
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~ 282 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTG 282 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCc
Confidence 99999888776654321111 1122334444443 3344455678999999999999876553 5567
Q ss_pred cccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCc
Q 041034 297 AIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLS 363 (701)
Q Consensus 297 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 363 (701)
+|.++.+|+.+.+. +.++..-..+|.++.+|+.++|..+ ++..-..+|..+.+|+.+.|..+ ++
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~ 346 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT 346 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC
Confidence 88899999999996 4566555678999999999999865 65455678999999999999754 44
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.20 E-value=2.3e-11 Score=122.19 Aligned_cols=140 Identities=15% Similarity=0.111 Sum_probs=102.7
Q ss_pred hhcCCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCc--eeeeeeeeeeCcEEE
Q 041034 448 ATEDFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN--IVKLYGFCLHKRCMF 525 (701)
Q Consensus 448 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~ 525 (701)
...+|.+....+.|..+.||++...+|+.+++|...... ...+.+|+.+++.+.+.+ +++++++...++..+
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~ 91 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW 91 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred hcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence 344555544434566699999987778889999976541 145678899888885433 567888888888899
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC--------------------------------- 572 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------------------- 572 (701)
+||||++|.++. ... .+ ...++.++++.|..||+..
T Consensus 92 ~v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE 160 (264)
T ss_dssp EEEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCG
T ss_pred EEEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhh
Confidence 999999998874 211 11 2256788888888888741
Q ss_pred ----------------------CCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 573 ----------------------TPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 573 ----------------------~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
...++|+|++|.||+++++..+.|+|||.|..
T Consensus 161 ~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 161 EHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp GGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776667999998754
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.10 E-value=4.2e-09 Score=111.87 Aligned_cols=285 Identities=13% Similarity=0.089 Sum_probs=132.2
Q ss_pred CCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCCCCCccccCCccccceeec
Q 041034 62 PNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYL 141 (701)
Q Consensus 62 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 141 (701)
.+|+.+.+.. .++.+...+|.++.+|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++.+...+|.. .+|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 4455555532 344444455555555555555432 443444455544 4555544432 33233333333 24555555
Q ss_pred ccccCCCCCcccccCCCCCcEEEceecccCCCcCcccccccccceeEeeecccCC------------CCCCCCCCccccC
Q 041034 142 RSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGPIPSTLFRLTNLERLFLGCNQFNG------------TIPREIGNLKNLT 209 (701)
Q Consensus 142 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------~~~~~~~~l~~L~ 209 (701)
..+ +..+...+|.+. +|..+.+.. .++......|..+.+++.+.+..+.... .....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 433 222222333332 233333222 1222233344444444444443322110 1111122223333
Q ss_pred ccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCCCccccCcccCCCCCCcEEEccCcc
Q 041034 210 HLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNKIRGIIPDELSKLSNLQYLNLSSNL 289 (701)
Q Consensus 210 ~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 289 (701)
.+.+..+. .......+..+.+|+.+.+..+ +.......|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+
T Consensus 198 ~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 33332221 1123344555566666665443 33334445556666666666554 44444555666666666666543
Q ss_pred CCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEccc
Q 041034 290 LSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSH 359 (701)
Q Consensus 290 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~ 359 (701)
+......+|.++.+|+.+.+.++.++..-..+|.++.+|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 33333445566666666666666665444556666666666666543 4433344566666666666543
No 409
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.08 E-value=1.8e-10 Score=121.55 Aligned_cols=144 Identities=19% Similarity=0.291 Sum_probs=107.2
Q ss_pred ccceEEeeccceEEEEEEcCCCcEEEEEEec--CCCccChHHHHHHHHHHHHHhcCC--CCceeeeeeeeeeC---cEEE
Q 041034 453 HIRYCIGTGGYGSVYKAELPDGKVVALKKLH--QSETEDSAFVESFQNEARVLSTVR--HRNIVKLYGFCLHK---RCMF 525 (701)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~ 525 (701)
...+.++.|.++.||++... +..+++|+.. ..... .....+.+|+.+++.+. +..+++++.++.+. +..|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS-SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 34678899999999999875 4678888876 33211 11256788999999887 45688899888776 4589
Q ss_pred EEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 041034 526 FIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC--------------------------------- 572 (701)
Q Consensus 526 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------------------- 572 (701)
+||||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999999997774321 113677888899999999999999731
Q ss_pred ----------------------CCCeEecCCCCCcEEEcCCCC--eEEEeecCccc
Q 041034 573 ----------------------TPSIVHRDISSNNILLNSNLE--AFVADFGTARL 604 (701)
Q Consensus 573 ----------------------~~givH~Dlkp~NIll~~~~~--~kL~DFGla~~ 604 (701)
...++|+|++|.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999987753 58999998864
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.06 E-value=3.8e-09 Score=112.21 Aligned_cols=285 Identities=13% Similarity=0.089 Sum_probs=199.4
Q ss_pred CEEEEEecccccccccCCcccCCCCCCcEEECCCCcceeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEEC
Q 041034 38 SITHIELVECSIKGELGSLNFSCFPNLQYLNLWNNNLSGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYL 117 (701)
Q Consensus 38 ~v~~l~l~~~~~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 117 (701)
.++.+.+.. +++ .++...|..+.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++.+...+|.. .+|+.+.+
T Consensus 47 ~i~~v~ip~-~vt-~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 47 RISEVRVNS-GIT-SIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GCSEEEECT-TEE-EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred CCEEEEeCC-Ccc-ChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 355555532 333 467778999999999999754 776777788887 6888887644 55455566765 48999999
Q ss_pred CCCCCCCCCccccCCccccceeecccccCCCCCcccccCCCCCcEEEceecccCCC------------cCcccccccccc
Q 041034 118 SNNSLHGTTPIEIGSLRNLEELYLRSNKLSGVLPQEIGNLKSLIWLSVMYNTVGGP------------IPSTLFRLTNLE 185 (701)
Q Consensus 118 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------~~~~~~~l~~L~ 185 (701)
..+ ++......|.+. +|+.+.+..+ ++.+...+|.+...++.+.+..+..... ....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 865 333444455543 5666666543 4555667788888888887765433211 112233344455
Q ss_pred eeEeeecccCCCCCCCCCCccccCccccccccccCCccccccCCCcccEEEeccCCCCCCCCcccCCCCcccEEEcCCCC
Q 041034 186 RLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLGHLTSLLYLDLSFNQLHSFIPLEIGNFSALAELDLSDNK 265 (701)
Q Consensus 186 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~ 265 (701)
.+.+..+. .......+....+|+.+.+..+ +......++.++.+|+.+.+..+ ++.+....|.++.+|+.+.+..+
T Consensus 198 ~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 55443322 2234456677788888887655 44455677888999999999876 66666778889999999999754
Q ss_pred CccccCcccCCCCCCcEEEccCccCCCCCcccccCccceeeecCCCCcCCCCCCCcccCCCCCCeeeccCC
Q 041034 266 IRGIIPDELSKLSNLQYLNLSSNLLSGQIPFAIGKLFNLVSLDLSKNKLSGSFPTGIGNCTELQHLALNHN 336 (701)
Q Consensus 266 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 336 (701)
+......+|.++++|+.+.+.++.++.....+|.++.+|+.+.|..+ ++..-..+|.++++|+.+.+..+
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 66566678999999999999999888666788999999999999765 66455678999999999988654
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.06 E-value=1.7e-11 Score=128.63 Aligned_cols=84 Identities=19% Similarity=0.359 Sum_probs=52.7
Q ss_pred CCCcccEEEeccCCCCCCCCccc---CCCCcccEEEcCCCCCccc----cCcccCCCCCCcEEEccCccCCCCCcccccC
Q 041034 228 HLTSLLYLDLSFNQLHSFIPLEI---GNFSALAELDLSDNKIRGI----IPDELSKLSNLQYLNLSSNLLSGQIPFAIGK 300 (701)
Q Consensus 228 ~l~~L~~L~L~~N~l~~~~~~~~---~~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 300 (701)
.+++|++|+|++|.+.+..+..+ ..+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 35677777777777664322222 2467888888888887764 3334456678888888888877543333332
Q ss_pred -ccceeeecCCCCc
Q 041034 301 -LFNLVSLDLSKNK 313 (701)
Q Consensus 301 -l~~L~~L~Ls~N~ 313 (701)
+ ...+++++++
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 1 3557777776
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.02 E-value=4.1e-11 Score=125.66 Aligned_cols=162 Identities=19% Similarity=0.189 Sum_probs=76.1
Q ss_pred ccccccccceeEeeecccCCCCCCCCCCccccCccccccccccCCcccccc--CCCcccEEEecc--CCCCCCCCcccCC
Q 041034 177 TLFRLTNLERLFLGCNQFNGTIPREIGNLKNLTHLSIITNKLTGAIPSTLG--HLTSLLYLDLSF--NQLHSFIPLEIGN 252 (701)
Q Consensus 177 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~--~l~~L~~L~L~~--N~l~~~~~~~~~~ 252 (701)
.+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+...
T Consensus 167 ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~----- 238 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD----- 238 (362)
T ss_dssp HHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC-----
T ss_pred HHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh-----
Confidence 3445566777777665211 1222 22 56666676666665533322332 466666666642 22111000
Q ss_pred CCcccEEEcCCCCCccccCccc--CCCCCCcEEEccCccCCCCCccccc---CccceeeecCCCCcCCCC----CCCccc
Q 041034 253 FSALAELDLSDNKIRGIIPDEL--SKLSNLQYLNLSSNLLSGQIPFAIG---KLFNLVSLDLSKNKLSGS----FPTGIG 323 (701)
Q Consensus 253 ~~~L~~L~L~~N~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~ 323 (701)
+.+ +...+ ..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.+++. ++..+.
T Consensus 239 -------------~~~-l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~ 304 (362)
T 2ra8_A 239 -------------MNV-FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVD 304 (362)
T ss_dssp -------------GGG-TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHH
T ss_pred -------------HHH-HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcc
Confidence 000 00001 1244555555555555432222221 355666666666666542 333344
Q ss_pred CCCCCCeeeccCCccCCCCCccccccccCCeEEccccc
Q 041034 324 NCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNN 361 (701)
Q Consensus 324 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~ 361 (701)
.+++|+.|+|++|.++...-..+...- ...+++++|+
T Consensus 305 ~l~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 305 KIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHTTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCSBC
T ss_pred cCCcceEEECCCCcCCHHHHHHHHHHc-CCEEEecCCc
Confidence 556777777777766532222222210 2556777765
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.89 E-value=5.3e-12 Score=125.55 Aligned_cols=92 Identities=24% Similarity=0.202 Sum_probs=50.5
Q ss_pred cCCCCCCCE--EECcCCcCc---ccCCcccCCCCCCCEEECCCCCCCCC--CccccCCccccceeecccccCCCCCcccc
Q 041034 82 IGSLSNLKY--LNLRWNNLT---GTIPKEIGSLRNLEVLYLSNNSLHGT--TPIEIGSLRNLEELYLRSNKLSGVLPQEI 154 (701)
Q Consensus 82 ~~~l~~L~~--L~L~~n~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 154 (701)
|...+.|+. ++++.|... +.++....++++|+.|+|++|+|++. +|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 334444544 556666432 22222224566777777777777763 345556677777777777777654 223
Q ss_pred cCCC--CCcEEEceecccCCCcC
Q 041034 155 GNLK--SLIWLSVMYNTVGGPIP 175 (701)
Q Consensus 155 ~~l~--~L~~L~L~~N~l~~~~~ 175 (701)
..++ +|++|+|++|.+.+.+|
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhcccCCcceEEccCCcCccccC
Confidence 3333 55666666665554433
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.72 E-value=3.8e-08 Score=101.83 Aligned_cols=137 Identities=19% Similarity=0.206 Sum_probs=102.4
Q ss_pred CCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCC----CceeeeeeeeeeCcEEEE
Q 041034 451 DFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH----RNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 451 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~l 526 (701)
.+...+.++.|....||++ ++.+++|+.... .....+.+|..+++.+.+ ..+++++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 5566788999999999998 667889976432 223568899998888865 234556555 45689
Q ss_pred EEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCC---------------------------------
Q 041034 527 IYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCT--------------------------------- 573 (701)
Q Consensus 527 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--------------------------------- 573 (701)
||||++|.++.+.... .++..++..++.+++..++.||+...
T Consensus 105 vme~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 9999999888643321 35667777888888888888885421
Q ss_pred ---------------------------CCeEecCCCCCcEEEcCCCCeEEEeecCcccc
Q 041034 574 ---------------------------PSIVHRDISSNNILLNSNLEAFVADFGTARLL 605 (701)
Q Consensus 574 ---------------------------~givH~Dlkp~NIll~~~~~~kL~DFGla~~~ 605 (701)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998666799999998653
No 415
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.64 E-value=5e-08 Score=100.13 Aligned_cols=137 Identities=23% Similarity=0.246 Sum_probs=100.7
Q ss_pred ceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCc--eeeeeeeeeeCc---EEEEEE
Q 041034 455 RYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRN--IVKLYGFCLHKR---CMFFIY 528 (701)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~ 528 (701)
++.++.|....||++. +.+++|+.... .....+.+|+++++.+. +.. +++++.+..... ..|+||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 5668999999999873 56889986432 23467889999998873 322 455555544333 348999
Q ss_pred EccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 041034 529 EYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD------------------------------------- 571 (701)
Q Consensus 529 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~------------------------------------- 571 (701)
||++|.++.+.... .++..++..++.+++..++.||+.
T Consensus 96 ~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 99999888653321 367777888899999999999861
Q ss_pred ------------------CCCCeEecCCCCCcEEEcC--CCCeEEEeecCcccc
Q 041034 572 ------------------CTPSIVHRDISSNNILLNS--NLEAFVADFGTARLL 605 (701)
Q Consensus 572 ------------------~~~givH~Dlkp~NIll~~--~~~~kL~DFGla~~~ 605 (701)
..+.++|+|++|.||++++ ...+.|+||+.+..-
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1135899999999999988 456789999998653
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.55 E-value=5.7e-07 Score=92.22 Aligned_cols=138 Identities=17% Similarity=0.102 Sum_probs=97.1
Q ss_pred cceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCC---ceeeeeeeee-eCcEEEEEEE
Q 041034 454 IRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR---NIVKLYGFCL-HKRCMFFIYE 529 (701)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e 529 (701)
..+.++.|....||+. ++.+++|+... ......+.+|.++++.+.+. .+++++.++. ..+..++|||
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 3567888998999998 56788887432 23356789999999998642 3667777764 4456789999
Q ss_pred ccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 041034 530 YMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHD-------------------------------------- 571 (701)
Q Consensus 530 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-------------------------------------- 571 (701)
|++|.++.+..-. .++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9999887653211 134445555556666666555542
Q ss_pred -------------------CCCCeEecCCCCCcEEEcC---CCCe-EEEeecCcccc
Q 041034 572 -------------------CTPSIVHRDISSNNILLNS---NLEA-FVADFGTARLL 605 (701)
Q Consensus 572 -------------------~~~givH~Dlkp~NIll~~---~~~~-kL~DFGla~~~ 605 (701)
..+.++|+|++|.||+++. ++.+ .|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999987 4565 79999988653
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.54 E-value=5.4e-09 Score=103.88 Aligned_cols=139 Identities=24% Similarity=0.239 Sum_probs=90.9
Q ss_pred CCCCcceeEeCCCC-CEEEEEecc---cccccccC-----------------------CcccCCCCCCcE--EECCCCcc
Q 041034 24 DHCNWVGITCDYKG-SITHIELVE---CSIKGELG-----------------------SLNFSCFPNLQY--LNLWNNNL 74 (701)
Q Consensus 24 d~c~w~gv~c~~~~-~v~~l~l~~---~~~~~~~~-----------------------~~~~~~~~~L~~--L~L~~n~l 74 (701)
..|.|.|+.|+..+ +|+.+.... .++.+.+. -..|...+.|.. ++++.|..
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 45889999998654 454433322 22222222 111233344444 56677743
Q ss_pred e---eeCCcccCCCCCCCEEECcCCcCcc--cCCcccCCCCCCCEEECCCCCCCCCCccccCCcc--ccceeecccccCC
Q 041034 75 S---GSIPPQIGSLSNLKYLNLRWNNLTG--TIPKEIGSLRNLEVLYLSNNSLHGTTPIEIGSLR--NLEELYLRSNKLS 147 (701)
Q Consensus 75 ~---~~~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~n~l~ 147 (701)
. +.++....++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.
T Consensus 156 ~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 156 SCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 2 2223333568999999999999998 4567778999999999999999976 3344444 9999999999998
Q ss_pred CCCcc-------cccCCCCCcEEE
Q 041034 148 GVLPQ-------EIGNLKSLIWLS 164 (701)
Q Consensus 148 ~~~~~-------~~~~l~~L~~L~ 164 (701)
+..|. .+..+++|+.||
T Consensus 234 ~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 234 DTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGCSSHHHHHHHHHHHCTTCCEES
T ss_pred cccCcchhHHHHHHHHCcccCeEC
Confidence 76552 344555555554
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.52 E-value=3.9e-07 Score=91.69 Aligned_cols=136 Identities=18% Similarity=0.193 Sum_probs=99.3
Q ss_pred eEEeeccce-EEEEEEcC-CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeeeCcEEEEEEEccC
Q 041034 456 YCIGTGGYG-SVYKAELP-DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLHKRCMFFIYEYME 532 (701)
Q Consensus 456 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 532 (701)
+.+..|..+ .||+.... ++..+++|+-... ....+.+|..+++.+. +--++++++++.+.+..|+|||+++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 445556555 69998664 5678999986543 2356788999988874 4447789999999999999999999
Q ss_pred CCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 041034 533 RGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDC---------------------------------------- 572 (701)
Q Consensus 533 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---------------------------------------- 572 (701)
|.++.+...... .....+..+++..|..||...
T Consensus 104 G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 988877654321 223346667777777777531
Q ss_pred ---------------CCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 573 ---------------TPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 573 ---------------~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
.+.++|+|+.|.||++++++.+-|+||+.+..
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12379999999999999877677999998854
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.49 E-value=1.6e-08 Score=95.50 Aligned_cols=89 Identities=19% Similarity=0.212 Sum_probs=43.8
Q ss_pred CCCCCCcEEECCCC-ccee----eCCcccCCCCCCCEEECcCCcCccc----CCcccCCCCCCCEEECCCCCCCCC----
Q 041034 59 SCFPNLQYLNLWNN-NLSG----SIPPQIGSLSNLKYLNLRWNNLTGT----IPKEIGSLRNLEVLYLSNNSLHGT---- 125 (701)
Q Consensus 59 ~~~~~L~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~---- 125 (701)
...+.|++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|...
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 44556666666666 5542 1233344455566666666665431 223333445566666666655432
Q ss_pred CccccCCccccceeec--ccccCC
Q 041034 126 TPIEIGSLRNLEELYL--RSNKLS 147 (701)
Q Consensus 126 ~~~~~~~l~~L~~L~L--~~n~l~ 147 (701)
+...+...++|++|+| ++|.++
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHhCCCceEEEecCCCCCCC
Confidence 1223334444555555 445444
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.49 E-value=5.2e-07 Score=91.41 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=60.2
Q ss_pred ccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCC---ceeeeeeeeeeCcEEEEEEE
Q 041034 453 HIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR---NIVKLYGFCLHKRCMFFIYE 529 (701)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e 529 (701)
...+.|+.|.++.||++...+|+.++||+........ ...+.+|++.++.+++. .+++++++. ..++|||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~---~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcch---hHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 4467899999999999988889999999975432211 25678999999999764 577888763 3589999
Q ss_pred ccCCCCH
Q 041034 530 YMERGSL 536 (701)
Q Consensus 530 ~~~~gsL 536 (701)
|++++++
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999864
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=1.5e-08 Score=95.80 Aligned_cols=119 Identities=17% Similarity=0.160 Sum_probs=77.6
Q ss_pred eCCcccCCCCCCCEEECcCC-cCccc----CCcccCCCCCCCEEECCCCCCCCCC----ccccCCccccceeecccccCC
Q 041034 77 SIPPQIGSLSNLKYLNLRWN-NLTGT----IPKEIGSLRNLEVLYLSNNSLHGTT----PIEIGSLRNLEELYLRSNKLS 147 (701)
Q Consensus 77 ~~~~~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~n~l~ 147 (701)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|+|.... ...+...++|++|+|++|.++
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 44556777889999999999 88742 3455677789999999999987432 233445577888888888887
Q ss_pred CC----CcccccCCCCCcEEEc--eecccCCCc----CcccccccccceeEeeecccC
Q 041034 148 GV----LPQEIGNLKSLIWLSV--MYNTVGGPI----PSTLFRLTNLERLFLGCNQFN 195 (701)
Q Consensus 148 ~~----~~~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 195 (701)
.. +..++...++|++|+| ++|.++... ...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 43 3445555666777777 666665432 222333355555555555543
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.40 E-value=1.1e-06 Score=92.25 Aligned_cols=77 Identities=10% Similarity=0.110 Sum_probs=57.8
Q ss_pred CccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCC--ceeeeeeeeeeC-cEEEEEE
Q 041034 452 FHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR--NIVKLYGFCLHK-RCMFFIY 528 (701)
Q Consensus 452 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~-~~~~lv~ 528 (701)
....+.++.|....+|++.. +++.+++|..... ..+.+|+.+++.+... .+++++.++.+. +..|+||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 44567889999999999975 5788999987532 2477888888888643 356777776654 5689999
Q ss_pred EccCCCCHH
Q 041034 529 EYMERGSLF 537 (701)
Q Consensus 529 e~~~~gsL~ 537 (701)
||++|.++.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.21 E-value=1.1e-06 Score=92.32 Aligned_cols=80 Identities=11% Similarity=0.036 Sum_probs=55.1
Q ss_pred ceEE-eeccceEEEEEEcC-------CCcEEEEEEecCCC---ccChHHHHHHHHHHHHHhcCC-C--Cceeeeeeeeee
Q 041034 455 RYCI-GTGGYGSVYKAELP-------DGKVVALKKLHQSE---TEDSAFVESFQNEARVLSTVR-H--RNIVKLYGFCLH 520 (701)
Q Consensus 455 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~ 520 (701)
.+.| +.|....+|++... +++.+++|+..... ... ...+.+|+.+++.+. + -.+++++.++.+
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~---~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~ 101 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP---TYRLDHQFEVIRLVGELTDVPVPRVRWIETT 101 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS---CCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc---hhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence 4667 78888999998654 26789999875432 100 134677888888774 2 357788887765
Q ss_pred C---cEEEEEEEccCCCCHH
Q 041034 521 K---RCMFFIYEYMERGSLF 537 (701)
Q Consensus 521 ~---~~~~lv~e~~~~gsL~ 537 (701)
. +..|+||||++|.++.
T Consensus 102 ~~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 102 GDVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp STTTSSCEEEEECCCCBCCC
T ss_pred CCccCCceEEEEecCCCChh
Confidence 4 3568999999987654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.10 E-value=6e-06 Score=85.91 Aligned_cols=141 Identities=18% Similarity=0.294 Sum_probs=80.1
Q ss_pred eEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC--CCceeeeee------eeeeCcEEEEE
Q 041034 456 YCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR--HRNIVKLYG------FCLHKRCMFFI 527 (701)
Q Consensus 456 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lv 527 (701)
+.|+.|..+.||++...+| .+++|+..... ..+..|..+++.+. .-.+++++. +....+..++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~-------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE-------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH-------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH-------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 4566677899999976554 58999887521 23334555555442 113344443 12346678999
Q ss_pred EEccCCCCHH-----------H---HHhcC---C--C-c-----cCCCHHHH----------------------------
Q 041034 528 YEYMERGSLF-----------Y---VLRDD---D--E-A-----IELNWTRR---------------------------- 554 (701)
Q Consensus 528 ~e~~~~gsL~-----------~---~l~~~---~--~-~-----~~l~~~~~---------------------------- 554 (701)
|||++|.++. + .++.. . . . ....|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986432 0 11110 0 0 0 01122211
Q ss_pred ---HHHHHHHHHHHHHHhc----------CCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 555 ---VNIVKSVAHALSYLHH----------DCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 555 ---~~i~~qi~~~L~~LH~----------~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
..+..++..++++|++ .....++|+|++|.||+++.++.+.|+||+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111223445666653 1244899999999999998888999999998753
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.05 E-value=6.1e-06 Score=87.93 Aligned_cols=79 Identities=10% Similarity=0.087 Sum_probs=50.2
Q ss_pred cceEEeeccceEEEEEEcC-CCcEEEEEEecCCCc-cC---hHHHHHHHHHHHHHhcCCC---CceeeeeeeeeeCcEEE
Q 041034 454 IRYCIGTGGYGSVYKAELP-DGKVVALKKLHQSET-ED---SAFVESFQNEARVLSTVRH---RNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~ 525 (701)
..+.+|.|..+.||++... +++.|+||...+... .. ....+++..|.++++.+.. ..+++++.+ +.+..+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 3567899999999999654 468899998764321 00 0112456778888887632 345566654 334457
Q ss_pred EEEEccCCC
Q 041034 526 FIYEYMERG 534 (701)
Q Consensus 526 lv~e~~~~g 534 (701)
+||||+++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.99 E-value=3.2e-05 Score=78.95 Aligned_cols=139 Identities=17% Similarity=0.213 Sum_probs=93.0
Q ss_pred cceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC---CCceeeeeeeeeeCcEEEEEEEc
Q 041034 454 IRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR---HRNIVKLYGFCLHKRCMFFIYEY 530 (701)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~ 530 (701)
..+.|+.|....+|+... +++.+++|+..... ...+..|...|+.+. ...++++++++...+..++||||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~------~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERSY------RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGGG------HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCccc------HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 456789999999999986 46788899876431 366788988888874 36788999988888889999999
Q ss_pred cCCCCHH--------H---HHhcCCC--c-----------------cCCCHHHHH---HHHH----------------HH
Q 041034 531 MERGSLF--------Y---VLRDDDE--A-----------------IELNWTRRV---NIVK----------------SV 561 (701)
Q Consensus 531 ~~~gsL~--------~---~l~~~~~--~-----------------~~l~~~~~~---~i~~----------------qi 561 (701)
+++..+. + .++.... . ..-+|.... ++.. ++
T Consensus 113 l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l 192 (312)
T 3jr1_A 113 LNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLI 192 (312)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHH
T ss_pred ccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 9987542 1 1222111 0 012454321 1111 11
Q ss_pred HHH-HHHHhc-CCCCCeEecCCCCCcEEEcCCCCeEEEeec
Q 041034 562 AHA-LSYLHH-DCTPSIVHRDISSNNILLNSNLEAFVADFG 600 (701)
Q Consensus 562 ~~~-L~~LH~-~~~~givH~Dlkp~NIll~~~~~~kL~DFG 600 (701)
+.. ...|.. ...+.+||+|+.+.|++++.++ +.|+||.
T Consensus 193 ~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 193 VQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 223421 2256899999999999999887 8899984
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.91 E-value=2.5e-06 Score=78.51 Aligned_cols=82 Identities=10% Similarity=0.096 Sum_probs=36.4
Q ss_pred CCCEEECcCCcCcccCCcccCCCCCCCEEECCCCC-CCCCCccccCCc----cccceeeccccc-CCCCCcccccCCCCC
Q 041034 87 NLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNS-LHGTTPIEIGSL----RNLEELYLRSNK-LSGVLPQEIGNLKSL 160 (701)
Q Consensus 87 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~L 160 (701)
+|++|||+++.|+..--..+.++++|+.|+|++|. ++...-..++.+ ++|++|+|++|. ++...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555443333344455555555555552 433222223332 245555555543 443322333444444
Q ss_pred cEEEceec
Q 041034 161 IWLSVMYN 168 (701)
Q Consensus 161 ~~L~L~~N 168 (701)
+.|+|++|
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 44444444
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.83 E-value=3.6e-06 Score=77.48 Aligned_cols=83 Identities=16% Similarity=0.192 Sum_probs=48.5
Q ss_pred CCCCEEECCCCCCCCCCccccCCccccceeeccccc-CCCCCcccccCC----CCCcEEEceecc-cCCCcCcccccccc
Q 041034 110 RNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLRSNK-LSGVLPQEIGNL----KSLIWLSVMYNT-VGGPIPSTLFRLTN 183 (701)
Q Consensus 110 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~ 183 (701)
.+|+.|||+++.++...-..+.++++|++|+|++|. ++...-..+..+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888776555566777778888887774 554333334433 245555555553 44333333444555
Q ss_pred cceeEeeec
Q 041034 184 LERLFLGCN 192 (701)
Q Consensus 184 L~~L~L~~N 192 (701)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555443
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.79 E-value=6.2e-05 Score=80.68 Aligned_cols=77 Identities=10% Similarity=0.122 Sum_probs=46.4
Q ss_pred cceEEeeccceEEEEEEcCCCcEEEEEEecCCCc------cChHHHHHHHHHHHHHh-cCCCCceeeeeeeeeeCcEEEE
Q 041034 454 IRYCIGTGGYGSVYKAELPDGKVVALKKLHQSET------EDSAFVESFQNEARVLS-TVRHRNIVKLYGFCLHKRCMFF 526 (701)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~l 526 (701)
..+.+|.|..+.||++.. +++.++||...+... ........+..|+..+. ......+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 467789999999999965 567899995432111 00001123333433322 22234677777765 456789
Q ss_pred EEEcc-CC
Q 041034 527 IYEYM-ER 533 (701)
Q Consensus 527 v~e~~-~~ 533 (701)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.73 E-value=9.5e-05 Score=74.76 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=56.6
Q ss_pred CCccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCC---CceeeeeeeeeeCcEEEEE
Q 041034 451 DFHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH---RNIVKLYGFCLHKRCMFFI 527 (701)
Q Consensus 451 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv 527 (701)
....++.+|.|..+.||+++..||+.|++|+........ ...+..|++.|+.+.. --+++++++. . .++|
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--~--~~lv 88 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGWD--D--RTLA 88 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T--TEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---hhHHHHHHHHHHHHHhhCCCCcceEEecc--C--ceEE
Confidence 345578899999999999999999999999876543322 2457789988888742 2355666542 2 3689
Q ss_pred EEccCCCC
Q 041034 528 YEYMERGS 535 (701)
Q Consensus 528 ~e~~~~gs 535 (701)
|||++++.
T Consensus 89 ~e~l~~~~ 96 (288)
T 3f7w_A 89 MEWVDERP 96 (288)
T ss_dssp EECCCCCC
T ss_pred EEeecccC
Confidence 99998764
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.52 E-value=0.00021 Score=73.93 Aligned_cols=142 Identities=18% Similarity=0.186 Sum_probs=74.1
Q ss_pred ceEEeeccceE-EEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC--CCceeeeeeeeeeCcEEEEEEEcc
Q 041034 455 RYCIGTGGYGS-VYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR--HRNIVKLYGFCLHKRCMFFIYEYM 531 (701)
Q Consensus 455 ~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~ 531 (701)
.+.++.|+... +|+....+++.+++|....... ..+..|+.+++.+. .-.+++++.+..+.+ +++||++
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 34566565554 6677664477788886654321 12344566666553 234566776643333 6899999
Q ss_pred CCCCHHHHHhcCC---------------------C--ccCCCHHHHH-------H-------------HHHHHHHHHHHH
Q 041034 532 ERGSLFYVLRDDD---------------------E--AIELNWTRRV-------N-------------IVKSVAHALSYL 568 (701)
Q Consensus 532 ~~gsL~~~l~~~~---------------------~--~~~l~~~~~~-------~-------------i~~qi~~~L~~L 568 (701)
.+.++.+++.... . ...++..... . ....+...++.+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 7766654432110 0 0012211100 0 001111222222
Q ss_pred h---cCCCCCeEecCCCCCcEEEcCC----CCeEEEeecCccc
Q 041034 569 H---HDCTPSIVHRDISSNNILLNSN----LEAFVADFGTARL 604 (701)
Q Consensus 569 H---~~~~~givH~Dlkp~NIll~~~----~~~kL~DFGla~~ 604 (701)
. ......++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1 1123479999999999999874 6789999998865
No 432
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.52 E-value=0.0007 Score=69.64 Aligned_cols=143 Identities=13% Similarity=0.144 Sum_probs=82.4
Q ss_pred ceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCC--Cceeeeeee-----eeeCcEEEEE
Q 041034 455 RYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRH--RNIVKLYGF-----CLHKRCMFFI 527 (701)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~-----~~~~~~~~lv 527 (701)
...++ |....||++...+|+.+++|........ ...+..|..+++.+.. -.+++++.. ....+..+++
T Consensus 31 ~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~----~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 31 LTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp CEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred EEeec-CcccceEEEEcCCCCEEEEEEcCCCCCC----HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 34566 8888999997777878999998754221 2456667777777642 224455443 1234567899
Q ss_pred EEccCCCCHH-----HH---------Hhc----CC--CccCCCHHHH----------------------HHHHHHHHHHH
Q 041034 528 YEYMERGSLF-----YV---------LRD----DD--EAIELNWTRR----------------------VNIVKSVAHAL 565 (701)
Q Consensus 528 ~e~~~~gsL~-----~~---------l~~----~~--~~~~l~~~~~----------------------~~i~~qi~~~L 565 (701)
|+|++|..+. .+ ++. .. .....++... ...+.+++..+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999875431 11 111 00 0011222111 01111222222
Q ss_pred HHHhc-CCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 566 SYLHH-DCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 566 ~~LH~-~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
...-. .....++|+|++|.||+++ + .+.++||+.+..
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 22211 1234689999999999998 4 899999988754
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.52 E-value=0.0011 Score=68.05 Aligned_cols=159 Identities=11% Similarity=0.081 Sum_probs=87.6
Q ss_pred ccHHHHHhhhcCCcc-----ceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCC--cee
Q 041034 440 ILYEDLINATEDFHI-----RYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHR--NIV 512 (701)
Q Consensus 440 ~~~~~~~~~~~~y~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv 512 (701)
++-+++....+.|.+ .+.|+.|....+|++...+| .+++|....... .+.+..|+.+++.+... .++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-----~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-----KNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC-----HHHHHHHHHHHHHHHHCCCCCC
Confidence 344555555555654 34566788889999976555 688998875311 13445677777666321 234
Q ss_pred eeeee------eeeCcEEEEEEEccCCCCHHH--------------HHhcC----CCcc--C---CCHHHHHH-------
Q 041034 513 KLYGF------CLHKRCMFFIYEYMERGSLFY--------------VLRDD----DEAI--E---LNWTRRVN------- 556 (701)
Q Consensus 513 ~l~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~~~~--~---l~~~~~~~------- 556 (701)
+++.. ....+..+++|+|++|..+.. .++.. .... . ..|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 44422 123456789999999864311 01111 0000 0 11222100
Q ss_pred -----HHHHHHHHHHHHhcC----CCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 557 -----IVKSVAHALSYLHHD----CTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 557 -----i~~qi~~~L~~LH~~----~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
+...+...++++++. ...+++|+|++|.||+++++..+.++||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455555532 234799999999999998775568999998754
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.37 E-value=1.9e-05 Score=74.11 Aligned_cols=13 Identities=15% Similarity=0.235 Sum_probs=6.4
Q ss_pred CCCCCeeeccCCc
Q 041034 325 CTELQHLALNHNS 337 (701)
Q Consensus 325 l~~L~~L~L~~N~ 337 (701)
-+.|+.|+++.|.
T Consensus 156 N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 156 NESLLRVGISFAS 168 (197)
T ss_dssp CSSCCEEECCCCC
T ss_pred CCCcCeEeccCCC
Confidence 3445555555443
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.36 E-value=0.00045 Score=70.21 Aligned_cols=141 Identities=13% Similarity=0.101 Sum_probs=76.3
Q ss_pred CccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCce-eeeeeeeeeCcEEEEEEEc
Q 041034 452 FHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNI-VKLYGFCLHKRCMFFIYEY 530 (701)
Q Consensus 452 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~ 530 (701)
+.-.+.|+.|....+|++ +.+++|+........ ....+|+.+++.+....+ ++++++.. +.-++|+||
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~----~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~ 88 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY----INRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRY 88 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC----C----CCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEEC
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccce----eCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEee
Confidence 344788999999999999 568889876532110 122457777766642222 56665543 334689999
Q ss_pred c-CCCCHHH------------------HHhcCCCc--cCCCH-HHHHHHHHH--------------HHHHHH----HHhc
Q 041034 531 M-ERGSLFY------------------VLRDDDEA--IELNW-TRRVNIVKS--------------VAHALS----YLHH 570 (701)
Q Consensus 531 ~-~~gsL~~------------------~l~~~~~~--~~l~~-~~~~~i~~q--------------i~~~L~----~LH~ 570 (701)
+ ++.++.. .++..... ...+. .....+..+ +...+. .+..
T Consensus 89 i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~ 168 (301)
T 3dxq_A 89 IAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAA 168 (301)
T ss_dssp CTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHS
T ss_pred cCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHh
Confidence 9 6544321 01111100 00111 111111100 111111 1111
Q ss_pred -CCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 571 -DCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 571 -~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
.....++|+|+.|.||+ ..++.+.++||..|..
T Consensus 169 ~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 169 HPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp SCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred cCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 12335899999999999 5667889999998864
No 436
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.36 E-value=0.00024 Score=76.15 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=49.1
Q ss_pred cceEEeeccceEEEEEEcCC--------CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeeeCcEE
Q 041034 454 IRYCIGTGGYGSVYKAELPD--------GKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLHKRCM 524 (701)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 524 (701)
..+.|+.|-...||++...+ ++.+++|+..... . .+.+.+|..+++.+. +.-.+++++.+.+
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--T---ESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 35678888889999997653 5789999884321 1 134457888888774 3234667766542
Q ss_pred EEEEEccCCCC
Q 041034 525 FFIYEYMERGS 535 (701)
Q Consensus 525 ~lv~e~~~~gs 535 (701)
.+||||++|.+
T Consensus 148 g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 GRLEEYIPSRP 158 (429)
T ss_dssp EEEECCCCEEE
T ss_pred CEEEEEeCCcc
Confidence 28999998743
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.34 E-value=3.1e-05 Score=72.57 Aligned_cols=63 Identities=19% Similarity=0.180 Sum_probs=28.6
Q ss_pred CCCCcEEECCCC-ccee----eCCcccCCCCCCCEEECcCCcCcccC----CcccCCCCCCCEEECCCCCCC
Q 041034 61 FPNLQYLNLWNN-NLSG----SIPPQIGSLSNLKYLNLRWNNLTGTI----PKEIGSLRNLEVLYLSNNSLH 123 (701)
Q Consensus 61 ~~~L~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~Ls~N~l~ 123 (701)
-+.|++|+|++| .|.. .+-..+..-+.|+.|+|++|+|...- .+.+..-+.|++|+|++|.|.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345555555553 4432 12233444445555555555554221 122223345555555555554
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.29 E-value=0.00036 Score=73.08 Aligned_cols=142 Identities=19% Similarity=0.247 Sum_probs=84.1
Q ss_pred ceEEeeccceEEEEEEcC--------CCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeeeCcEEE
Q 041034 455 RYCIGTGGYGSVYKAELP--------DGKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 525 (701)
++.+..|-...+|++... +++.|++|+.-... .. ...+.+|.++++.+. +.-.+++++++.+ .
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~---~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QG---VDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CC---HHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-ch---HHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 466777888999999764 25789999863321 11 355668999888874 3334667776543 2
Q ss_pred EEEEccCCCCHHH--------------H---HhcCCC--ccCCC--HHHHHHHHHHHHH-------------------HH
Q 041034 526 FIYEYMERGSLFY--------------V---LRDDDE--AIELN--WTRRVNIVKSVAH-------------------AL 565 (701)
Q Consensus 526 lv~e~~~~gsL~~--------------~---l~~~~~--~~~l~--~~~~~~i~~qi~~-------------------~L 565 (701)
+||||++|.++.. . ++.... ..... +.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 8999999865421 0 111110 11122 4455555544322 23
Q ss_pred HHHh----cC-CCCCeEecCCCCCcEEEcCC----CCeEEEeecCccc
Q 041034 566 SYLH----HD-CTPSIVHRDISSNNILLNSN----LEAFVADFGTARL 604 (701)
Q Consensus 566 ~~LH----~~-~~~givH~Dlkp~NIll~~~----~~~kL~DFGla~~ 604 (701)
.+|. .. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 3332 21 23468999999999999876 7899999998864
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.19 E-value=0.001 Score=71.63 Aligned_cols=75 Identities=17% Similarity=0.101 Sum_probs=48.0
Q ss_pred cceEEeeccceEEEEEEcCC-CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCc-eeeeeeeeeeCcEEEEEEEcc
Q 041034 454 IRYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN-IVKLYGFCLHKRCMFFIYEYM 531 (701)
Q Consensus 454 ~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~ 531 (701)
..+.|+.|-...+|++...+ ++.+++|+.......- -...+|..+++.+...+ .+++++++. + .+||||+
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~----idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I 183 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI----INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFM 183 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC----SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECC
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh----cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEee
Confidence 35678888889999997754 5788899875432110 11257888888886433 356777763 2 2599999
Q ss_pred CCCCH
Q 041034 532 ERGSL 536 (701)
Q Consensus 532 ~~gsL 536 (701)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87543
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.00098 Score=58.24 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=45.3
Q ss_pred eecCCCCcCC-CCCCCcccCCCCCCeeeccCCccCCCCCccccccccCCeEEcccccCcccCC
Q 041034 306 SLDLSKNKLS-GSFPTGIGNCTELQHLALNHNSLDGTIPPEIGKILLLQNLDLSHNNLSGTIP 367 (701)
Q Consensus 306 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 367 (701)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|++.+..-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 5777777776 35665443 468888888888886666778888889999999999887654
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.97 E-value=0.0015 Score=67.66 Aligned_cols=31 Identities=23% Similarity=0.477 Sum_probs=27.7
Q ss_pred CCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 574 PSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 574 ~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
..++|+|+.|.||++++++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888899999988764
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.89 E-value=0.0014 Score=57.27 Aligned_cols=56 Identities=25% Similarity=0.280 Sum_probs=33.2
Q ss_pred EEECCCCcce-eeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCCCCCC
Q 041034 66 YLNLWNNNLS-GSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSNNSLH 123 (701)
Q Consensus 66 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 123 (701)
.++.++++++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3455555554 23343322 35677777777777666666667777777777777664
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.87 E-value=0.00064 Score=71.31 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=43.5
Q ss_pred ceEEeeccceEEEEEEcCC---------CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCc-eeeeeeeeeeCcEE
Q 041034 455 RYCIGTGGYGSVYKAELPD---------GKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRN-IVKLYGFCLHKRCM 524 (701)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~ 524 (701)
.+.++.|....+|++...+ ++.+++|+....... ......|..+++.+.... ++++++.. .+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 4567788889999997653 268888887543211 112356777777774222 45666554 22
Q ss_pred EEEEEccCCCC
Q 041034 525 FFIYEYMERGS 535 (701)
Q Consensus 525 ~lv~e~~~~gs 535 (701)
++||||++|.+
T Consensus 110 ~~v~e~i~G~~ 120 (369)
T 3c5i_A 110 GRIEEWLYGDP 120 (369)
T ss_dssp EEEEECCCSEE
T ss_pred cEEEEEecCCc
Confidence 68999998754
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.40 E-value=0.0052 Score=64.54 Aligned_cols=146 Identities=18% Similarity=0.189 Sum_probs=84.3
Q ss_pred ceEEeeccceEEEEEEcCC--------CcEEEEEEecCCCcc------------ChH---HHHHHHHHHHHHhcCC-CCc
Q 041034 455 RYCIGTGGYGSVYKAELPD--------GKVVALKKLHQSETE------------DSA---FVESFQNEARVLSTVR-HRN 510 (701)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------~~~---~~~~~~~E~~~l~~l~-h~n 510 (701)
++.|..|-...+|++..++ ++.|++++.-..... ... ..+.+..|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4567778889999997753 367888886543210 000 0112335888887774 444
Q ss_pred eeeeeeeeeeCcEEEEEEEccCCCCHH--HH---------------HhcCCC--ccCCC--HHHHHHHHHHHH-------
Q 041034 511 IVKLYGFCLHKRCMFFIYEYMERGSLF--YV---------------LRDDDE--AIELN--WTRRVNIVKSVA------- 562 (701)
Q Consensus 511 iv~l~~~~~~~~~~~lv~e~~~~gsL~--~~---------------l~~~~~--~~~l~--~~~~~~i~~qi~------- 562 (701)
.+++++++.. . +|+||++|.+|. ++ ++.... ..... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 6677877643 2 899999975442 11 111110 11122 234444443321
Q ss_pred ---------------HHHH----HHhcC-CCCCeEecCCCCCcEEEcCC------CCeEEEeecCccc
Q 041034 563 ---------------HALS----YLHHD-CTPSIVHRDISSNNILLNSN------LEAFVADFGTARL 604 (701)
Q Consensus 563 ---------------~~L~----~LH~~-~~~givH~Dlkp~NIll~~~------~~~kL~DFGla~~ 604 (701)
.-+. ++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 23468999999999999876 7899999998864
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.96 E-value=0.011 Score=62.80 Aligned_cols=141 Identities=11% Similarity=0.079 Sum_probs=83.9
Q ss_pred ceEEeeccceEEEEEEcCC--------CcEEEEEEecCCCccChHHHHHHHHHHHHHhcCC-CCceeeeeeeeeeCcEEE
Q 041034 455 RYCIGTGGYGSVYKAELPD--------GKVVALKKLHQSETEDSAFVESFQNEARVLSTVR-HRNIVKLYGFCLHKRCMF 525 (701)
Q Consensus 455 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 525 (701)
++.+..|-...+|++...+ ++.|++|+....... .-...+|..+++.+. +.-.+++++.+ .+ +
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~----~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK----FYDSKVELDVFRYLSNINIAPNIIADF--PE--G 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C----CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--E
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch----hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--C
Confidence 5667778889999997653 578999986543211 112356888877774 33345666543 22 6
Q ss_pred EEEEccCCCCHHH--------------H---HhcC-------C---CccCCCHHHHHHHHHHH-----------------
Q 041034 526 FIYEYMERGSLFY--------------V---LRDD-------D---EAIELNWTRRVNIVKSV----------------- 561 (701)
Q Consensus 526 lv~e~~~~gsL~~--------------~---l~~~-------~---~~~~l~~~~~~~i~~qi----------------- 561 (701)
+||||++|.++.. . ++.. . ...+.-+.++.++..++
T Consensus 147 ~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 226 (424)
T 3mes_A 147 RIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYS 226 (424)
T ss_dssp EEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHH
T ss_pred EEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHH
Confidence 8999999865321 0 0110 0 01111244444443322
Q ss_pred --HHHHHHHhc---------------------CCCCCeEecCCCCCcEEEcCCCCeEEEeecCccc
Q 041034 562 --AHALSYLHH---------------------DCTPSIVHRDISSNNILLNSNLEAFVADFGTARL 604 (701)
Q Consensus 562 --~~~L~~LH~---------------------~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~ 604 (701)
...+.+|.+ .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 227 ~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 227 KILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 222333321 11236899999999999 7788999999998864
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.69 E-value=0.24 Score=46.51 Aligned_cols=95 Identities=17% Similarity=0.051 Sum_probs=59.5
Q ss_pred CHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCccccccCCCCcee
Q 041034 535 SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTARLLHVDSSNRTL 614 (701)
Q Consensus 535 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~~~~~~~~~~~~ 614 (701)
+|.++++..+. ++++.+++.+++|.+.+|.-+-.+. .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc-----------
Confidence 89999987654 6999999999999999988762110 111233457899999999887653 1110
Q ss_pred ecccccccCCCCCCCCcCChhhHHHHHHHHHHHHH
Q 041034 615 RAGTYGYIAPDQRLSPPVNQKIIQDIILVSTTALA 649 (701)
Q Consensus 615 ~~gt~~y~aPE~~~~~~~~~~~~~Di~slg~i~~~ 649 (701)
.....+.|||.... ....+ .-||+||+++|.
T Consensus 98 -~~~~~~~~pe~~~~-~~te~--~~IysLG~tLY~ 128 (229)
T 2yle_A 98 -AGEPPPVAGKLGYS-QCMET--EVIESLGIIIYK 128 (229)
T ss_dssp ----------CCSSS-SSCHH--HHHHHHHHHHHH
T ss_pred -ccccCCCChhhccc-cchHH--HHHHHHHHHHHH
Confidence 12335678887642 22233 489999999995
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.10 E-value=0.13 Score=54.31 Aligned_cols=30 Identities=27% Similarity=0.438 Sum_probs=25.2
Q ss_pred CeEecCCCCCcEEE------cCCCCeEEEeecCccc
Q 041034 575 SIVHRDISSNNILL------NSNLEAFVADFGTARL 604 (701)
Q Consensus 575 givH~Dlkp~NIll------~~~~~~kL~DFGla~~ 604 (701)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4457899999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=86.41 E-value=0.94 Score=42.48 Aligned_cols=84 Identities=2% Similarity=0.054 Sum_probs=61.9
Q ss_pred CCCceeeeeeeeeeCcEEEEEEEccCCC-CHHHHHhcCCCccCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCc
Q 041034 507 RHRNIVKLYGFCLHKRCMFFIYEYMERG-SLFYVLRDDDEAIELNWTRRVNIVKSVAHALSYLHHDCTPSIVHRDISSNN 585 (701)
Q Consensus 507 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~givH~Dlkp~N 585 (701)
.||+.++. .+-.+.+.+.+.++.-+.+ +... ++ ..+...+++++..|+....+++. -+|--+.|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik------~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK------SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG------GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH------hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecce
Confidence 57888765 4556667766666654422 2222 22 47778999999999998877764 4889999999
Q ss_pred EEEcCCCCeEEEeecCcc
Q 041034 586 ILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 586 Ill~~~~~~kL~DFGla~ 603 (701)
|+++.++.+++.-.|+..
T Consensus 110 L~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp EEECTTSCEEESCCEETT
T ss_pred EEEcCCCCEEEEEccCcc
Confidence 999999999998777653
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.13 E-value=1.6 Score=41.03 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=60.3
Q ss_pred CCCceeeeeeeeeeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeEecCCCCCc
Q 041034 507 RHRNIVKLYGFCLHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSVAHALS-YLHHDCTPSIVHRDISSNN 585 (701)
Q Consensus 507 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~~L~-~LH~~~~~givH~Dlkp~N 585 (701)
.||++ -..+-.+++.+.+.++.-+++.-...++ ..+...+++++..|+.... +++ .-+|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCce
Confidence 57877 3334466777777777654433233332 3677889999999888777 666 45888999999
Q ss_pred EEEcCCCCeEEEeecCc
Q 041034 586 ILLNSNLEAFVADFGTA 602 (701)
Q Consensus 586 Ill~~~~~~kL~DFGla 602 (701)
|+++.++.+++.-.|+-
T Consensus 115 L~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVK 131 (219)
T ss_dssp EEECTTCCEEESCCEET
T ss_pred EEEeCCCcEEEEEcCCc
Confidence 99999999999877754
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.65 E-value=0.3 Score=52.36 Aligned_cols=63 Identities=14% Similarity=0.103 Sum_probs=17.9
Q ss_pred ccceEEeeccceEEEEEEcCC-CcEEEE------EEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeeeee
Q 041034 453 HIRYCIGTGGYGSVYKAELPD-GKVVAL------KKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGFCL 519 (701)
Q Consensus 453 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 519 (701)
.+.+.+| ||+||+|.+.. ..+||| |..+..... ......+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccccc-ccccccccccccccccccccccCCCcceEE
Confidence 3455665 99999997753 467888 666543322 222356788999999999999999988754
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=50.41 E-value=1.5e+02 Score=32.22 Aligned_cols=45 Identities=29% Similarity=0.359 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHH--HHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 551 WTRRVNIVKSVA--HALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 551 ~~~~~~i~~qi~--~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
+..+..++..+| ..+.|+= || +|=.++|||++.+|++.=+|||.+
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHh
Confidence 455666666654 3466776 33 577899999999999999999987
No 452
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=47.65 E-value=1.7e+02 Score=32.51 Aligned_cols=45 Identities=31% Similarity=0.353 Sum_probs=33.0
Q ss_pred HHHHHHHHHHH--HHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCcc
Q 041034 552 TRRVNIVKSVA--HALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTAR 603 (701)
Q Consensus 552 ~~~~~i~~qi~--~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla~ 603 (701)
..+..++..+| ..+.|+=.- +|=.++|||++.+|++.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34555555554 346666532 6889999999999999999999873
No 453
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=44.52 E-value=11 Score=38.61 Aligned_cols=26 Identities=23% Similarity=0.154 Sum_probs=22.8
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 041034 641 ILVSTTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 641 ~slg~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
-.+..++..||..||.+|||++|+++
T Consensus 347 ~~~~dli~~mL~~dP~~Rpta~e~L~ 372 (382)
T 2vx3_A 347 LKFKDLILRMLDYDPKTRIQPYYALQ 372 (382)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHHhcCCChhhCCCHHHHhc
Confidence 35677899999999999999999875
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=44.03 E-value=40 Score=27.02 Aligned_cols=38 Identities=13% Similarity=0.030 Sum_probs=15.5
Q ss_pred cccCCCCCCCEEECCCCCCCCCCccccCCccccceeecc
Q 041034 104 KEIGSLRNLEVLYLSNNSLHGTTPIEIGSLRNLEELYLR 142 (701)
Q Consensus 104 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 142 (701)
.+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34444444444444332 222333344444444444443
No 455
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=39.20 E-value=11 Score=37.59 Aligned_cols=24 Identities=21% Similarity=0.061 Sum_probs=21.1
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
+..++..||..+|.+|||++|+++
T Consensus 296 ~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 296 ALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 455688999999999999999986
No 456
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=39.11 E-value=11 Score=36.78 Aligned_cols=24 Identities=17% Similarity=0.129 Sum_probs=20.6
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
+-.++..|+..||.+|||++|+++
T Consensus 259 ~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 259 GRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhccChhhCCCHHHHhc
Confidence 345688999999999999999876
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.99 E-value=59 Score=25.96 Aligned_cols=44 Identities=14% Similarity=0.089 Sum_probs=22.5
Q ss_pred eeeCCcccCCCCCCCEEECcCCcCcccCCcccCCCCCCCEEECCC
Q 041034 75 SGSIPPQIGSLSNLKYLNLRWNNLTGTIPKEIGSLRNLEVLYLSN 119 (701)
Q Consensus 75 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 119 (701)
+.+...+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3334445555555555555443 3334445566666666665544
No 458
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=37.50 E-value=12 Score=36.90 Aligned_cols=24 Identities=17% Similarity=0.044 Sum_probs=21.1
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
+-.++..|+..+|.+|||++|+++
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 282 AVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHcCCCccccCCHHHHhC
Confidence 455688999999999999999976
No 459
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=33.68 E-value=12 Score=37.86 Aligned_cols=25 Identities=12% Similarity=-0.033 Sum_probs=21.9
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
+..++..||..||.+|||++|+++.
T Consensus 288 ~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 288 ALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHhCC
Confidence 5567889999999999999999874
No 460
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=33.67 E-value=20 Score=36.48 Aligned_cols=25 Identities=12% Similarity=-0.008 Sum_probs=21.8
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
+-.++..|+..+|.+|||++|+++.
T Consensus 300 ~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 300 AADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHCCCChhhcCCHHHHhcC
Confidence 4567889999999999999999874
No 461
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=33.17 E-value=21 Score=36.27 Aligned_cols=25 Identities=12% Similarity=0.061 Sum_probs=21.8
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
+..++..||..+|.+|||+.|+++.
T Consensus 290 ~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 290 ALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcC
Confidence 4567889999999999999999874
No 462
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=33.06 E-value=1.1e+02 Score=30.60 Aligned_cols=140 Identities=14% Similarity=0.093 Sum_probs=72.7
Q ss_pred CccceEEeeccceEEEEEEcCCCcEEEEEEecCCCccChHHHHHHHHHHHHHhcCCCCceeeeeee--------------
Q 041034 452 FHIRYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVESFQNEARVLSTVRHRNIVKLYGF-------------- 517 (701)
Q Consensus 452 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-------------- 517 (701)
++.++....|.. .||.+.. ++..|+||-.. ....+.+-.++...-.+.-|+..-+.-.
T Consensus 71 v~~I~~s~~Gst-gvff~~t-d~~~~VVK~s~------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~ 142 (342)
T 1cja_A 71 FKGIERSEKGTE-GLFFVET-ESGVFIVKRST------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAI 142 (342)
T ss_dssp EEEEEECCSTTS-CEEEEEE-SSCEEEEECCT------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHH
T ss_pred eeEEEeccCCCC-CeEEEEe-CCCEEEEeCcH------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHh
Confidence 344455555654 5555544 57789999441 1223455555555555666653222111
Q ss_pred e--------eeCcEEEEEEEccCCCCHHHHHhcCCCccCCCHHHHHHHHHHH--HHHHHHHhcCCCC-CeEe-cCCCCCc
Q 041034 518 C--------LHKRCMFFIYEYMERGSLFYVLRDDDEAIELNWTRRVNIVKSV--AHALSYLHHDCTP-SIVH-RDISSNN 585 (701)
Q Consensus 518 ~--------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi--~~~L~~LH~~~~~-givH-~Dlkp~N 585 (701)
. ......+++|||.+|..|.+.-.... ...+.... ..++ +-++.++..+..+ ..+. .-=.|+|
T Consensus 143 ~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~-~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~N 217 (342)
T 1cja_A 143 DKSFRVITTLANQANILLMELVRGITLNKLTTTSA-PEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDN 217 (342)
T ss_dssp CSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSH-HHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGG
T ss_pred hhhhHHHHHhhcccceehhhhcCCCccccchhhhh-hhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhh
Confidence 0 01225679999999766543321110 00122222 3332 3345555544322 2211 1257899
Q ss_pred EEEcCCC-CeEEEeecCccc
Q 041034 586 ILLNSNL-EAFVADFGTARL 604 (701)
Q Consensus 586 Ill~~~~-~~kL~DFGla~~ 604 (701)
||+++++ .+.++|-+.+..
T Consensus 218 IL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 218 IMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EEEESBTTCEEECSCCCCCC
T ss_pred eEEeCCCCeEEEEcCCcccc
Confidence 9997755 488999998854
No 463
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=32.24 E-value=14 Score=36.78 Aligned_cols=24 Identities=8% Similarity=0.025 Sum_probs=21.0
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
+-.++..|+..||.+|||++|+++
T Consensus 258 ~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 258 GADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHcCcCcccCCCHHHHhc
Confidence 345688999999999999999987
No 464
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=31.24 E-value=15 Score=37.08 Aligned_cols=25 Identities=16% Similarity=-0.014 Sum_probs=21.9
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
+..++..||+.+|.+|||+.|+++.
T Consensus 291 ~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 291 AYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhccCccccCCHHHHhcC
Confidence 5567889999999999999999863
No 465
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=27.80 E-value=22 Score=36.76 Aligned_cols=24 Identities=21% Similarity=0.127 Sum_probs=21.2
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHH
Q 041034 644 STTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 644 g~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
-.++..||..||.+|||++|+++.
T Consensus 311 ~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 311 FHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCCcccCCCHHHHhcC
Confidence 356889999999999999999884
No 466
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=27.55 E-value=2e+02 Score=33.64 Aligned_cols=46 Identities=22% Similarity=0.340 Sum_probs=33.0
Q ss_pred CHHHH-HHHHHHHH--HHHHHHhcCCCCCeEecCCCCCcEEEcCCCCeEEEeecCc
Q 041034 550 NWTRR-VNIVKSVA--HALSYLHHDCTPSIVHRDISSNNILLNSNLEAFVADFGTA 602 (701)
Q Consensus 550 ~~~~~-~~i~~qi~--~~L~~LH~~~~~givH~Dlkp~NIll~~~~~~kL~DFGla 602 (701)
.|..+ ..++..+| ..+.|+= || +|=.++|||++.+|++.=+|||.+
T Consensus 912 ~~~~ar~nF~~S~A~ysvv~YiL-----gi--gDRH~~NILid~tG~v~HIDFG~~ 960 (1091)
T 3hhm_A 912 IYDAAIDLFTRSCAGYCVATFIL-----GI--GDRHNSNIMVKDDGQLFHIDFGHF 960 (1091)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEEETTSCEEECCCCCC
T ss_pred HHHHHHHHHHHHhhhhhheEEEE-----ee--cCCCCcceEEeCCCCEEEEeehhh
Confidence 44433 44555544 3466665 33 677899999999999999999987
No 467
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=27.14 E-value=22 Score=37.14 Aligned_cols=24 Identities=17% Similarity=0.321 Sum_probs=21.0
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
+-.++..|+..+|.+|||+.++++
T Consensus 272 ~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 272 ATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhhCChhhCCCHHHHHh
Confidence 456788999999999999999975
No 468
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=25.63 E-value=28 Score=35.48 Aligned_cols=22 Identities=23% Similarity=0.077 Sum_probs=19.3
Q ss_pred HHHHHcccCCCCCCCCHHHHHH
Q 041034 645 TTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 645 ~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
-++..||..||.+|||++|+++
T Consensus 331 DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 331 DLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHCcCChhHCcCHHHHhc
Confidence 4578899999999999999875
No 469
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=23.43 E-value=27 Score=36.13 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=20.3
Q ss_pred HHHHHcccCCCCCCCCHHHHHHH
Q 041034 645 TTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 645 ~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
-++..||..||.+|||++|+++.
T Consensus 323 dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 323 SLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHHCcCChhHCcCHHHHhcC
Confidence 46789999999999999999873
No 470
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=23.05 E-value=30 Score=35.30 Aligned_cols=24 Identities=17% Similarity=0.033 Sum_probs=20.7
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQ 666 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~ 666 (701)
+-.++..||..+|.+|||+.|+++
T Consensus 298 ~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 298 AIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCCCHHHHhc
Confidence 445688999999999999999975
No 471
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=22.03 E-value=28 Score=35.62 Aligned_cols=25 Identities=12% Similarity=0.054 Sum_probs=21.5
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
+-.++..||..||.+|||++|+++.
T Consensus 305 ~~dll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 305 ALDLLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHhhccCcccCCCHHHHhCC
Confidence 4456888999999999999999875
No 472
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=21.25 E-value=34 Score=35.10 Aligned_cols=25 Identities=16% Similarity=0.018 Sum_probs=21.6
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHH
Q 041034 643 VSTTALACLRSKPKSRPTMQRISQE 667 (701)
Q Consensus 643 lg~i~~~cl~~~P~~Rpt~~~i~~~ 667 (701)
+-.++..||..+|.+|||+.|+++.
T Consensus 298 ~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 298 AIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHhCCChhhCCCHHHHhcC
Confidence 4456889999999999999999874
Done!