Query 041039
Match_columns 271
No_of_seqs 237 out of 1014
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:12:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041039.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041039hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1638 Steroid reductase [Lip 100.0 2.4E-66 5.2E-71 453.5 23.1 249 7-271 3-257 (257)
2 PLN02392 probable steroid redu 100.0 2.3E-58 5E-63 414.3 27.0 230 25-271 17-260 (260)
3 PLN02560 enoyl-CoA reductase 100.0 2.2E-54 4.7E-59 399.3 22.2 211 55-270 79-308 (308)
4 PLN03164 3-oxo-5-alpha-steroid 100.0 6E-46 1.3E-50 340.6 19.4 178 94-271 114-323 (323)
5 KOG1639 Steroid reductase requ 100.0 2.2E-46 4.8E-51 328.6 15.2 210 55-270 75-297 (297)
6 PF02544 Steroid_dh: 3-oxo-5-a 100.0 3.4E-42 7.4E-47 288.4 16.0 149 120-271 1-150 (150)
7 KOG1640 Predicted steroid redu 100.0 4.6E-36 1E-40 268.8 17.8 176 94-271 124-304 (304)
8 PF06966 DUF1295: Protein of u 99.7 1.4E-15 3.1E-20 136.2 16.4 68 161-228 119-186 (235)
9 COG3752 Steroid 5-alpha reduct 99.6 1.4E-14 3.1E-19 128.5 14.6 110 161-270 148-266 (272)
10 KOG4650 Predicted steroid redu 99.0 9.5E-09 2.1E-13 91.6 15.4 108 162-270 176-296 (311)
11 PF01222 ERG4_ERG24: Ergostero 98.9 8E-09 1.7E-13 100.2 9.2 109 163-271 304-432 (432)
12 PF04191 PEMT: Phospholipid me 98.7 1.6E-07 3.4E-12 73.3 10.9 97 163-259 3-106 (106)
13 COG2020 STE14 Putative protein 98.4 1.8E-06 3.9E-11 74.9 10.5 109 162-270 69-185 (187)
14 KOG1435 Sterol reductase/lamin 98.4 3.1E-07 6.8E-12 87.6 4.5 108 164-271 301-428 (428)
15 PF04140 ICMT: Isoprenylcystei 97.8 0.00024 5.1E-09 55.0 9.0 79 168-246 3-86 (94)
16 KOG2628 Farnesyl cysteine-carb 97.2 0.0019 4.2E-08 56.0 8.9 81 190-270 115-200 (201)
17 COG1755 Uncharacterized protei 96.5 0.035 7.7E-07 47.1 10.1 88 163-250 71-163 (172)
18 PLN02797 phosphatidyl-N-dimeth 74.7 14 0.00031 31.2 6.8 74 164-241 67-145 (164)
19 PF13789 DUF4181: Domain of un 45.6 54 0.0012 25.7 5.2 54 194-247 13-78 (110)
20 PF01148 CTP_transf_1: Cytidyl 29.6 2.3E+02 0.005 24.6 7.2 42 171-212 203-248 (259)
21 PF05653 Mg_trans_NIPA: Magnes 25.8 3.5E+02 0.0076 25.0 7.9 17 209-225 45-61 (300)
22 PF07298 NnrU: NnrU protein; 23.0 5E+02 0.011 22.5 12.8 63 202-268 96-163 (191)
23 COG0573 PstC ABC-type phosphat 22.5 1.2E+02 0.0026 28.6 4.1 29 162-190 281-309 (310)
24 PF15584 Imm44: Immunity prote 21.2 43 0.00093 25.9 0.7 21 193-213 21-50 (94)
No 1
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-66 Score=453.53 Aligned_cols=249 Identities=28% Similarity=0.397 Sum_probs=207.5
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCccccCccccccccCCccccccchhhHHhhhhHHHHHHHHHhh
Q 041039 7 FFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWL 86 (271)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ygk~~~~~~~~~~~~~~~~~~i~~r~~w~~~e~p~~~~~~~~~~~ 86 (271)
..|+.+...+..++++....++..++.+.++ ++|||+ +++-. + .+..+|+|.+|++||.|+++++++.+..
T Consensus 3 ~~~~~~~il~~~~~~~~~~~~~~~~l~~~~k--s~yGr~--s~s~~--~---~~~~ip~~~aw~iqe~Paf~~pl~~~~~ 73 (257)
T KOG1638|consen 3 VYPLREIILAGSWTLIGAGALAFLALKRQRK--SGYGRH--SSSLN--P---TKTRIPPRIAWFIQELPAFAIPLYSLFR 73 (257)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhhccc--cCCcee--cCCCc--c---hhcCCCchhHHHHhcCcHHHhhHHHhcC
Confidence 4566666666677777766666665555553 999999 44322 1 2234999999999999999999998888
Q ss_pred CCCCc-hhHHHHHHHHHHHHHHHHHhhhheecccCCcchhhHHHHHHHHHHHHHHHHhhhc-----ccchhhhccCCchh
Q 041039 87 CPFEG-FRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQR-----LSQREELILDQPTI 160 (271)
Q Consensus 87 ~p~~~-~~~~ll~~l~~lHy~~R~~e~~fv~~~s~~m~~~~~~~~~~~y~~~~~~~~~~~~-----~~~~~~~~~~~p~~ 160 (271)
.|+++ .+..+|.+++++||++|++|++|+++.+++||+.... ..+.+|.++++.|+ .+.+++.|.+++
T Consensus 74 ~~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a----~a~~F~~~NG~lqg~y~~~~~~~~d~~~~~~-- 147 (257)
T KOG1638|consen 74 GPSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVA----LAIAFCTLNGTLQGLYLSHYQLYEDPWVTDI-- 147 (257)
T ss_pred CCcccccccHHHHHHHHHHHHHHHHhheeeecCCCCccHHHHH----HHHHHHHhhHHHHHHHHHhcccccCCCchhH--
Confidence 77654 5778999999999999999999999988888865544 44445666655553 333333344333
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHhcccCCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 041039 161 DLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFY 240 (271)
Q Consensus 161 ~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~ 240 (271)
+..+|+.+|+.||++|++||.+|++|||+++++||||+||||||||||||||||+||+|+|+++|+++++.|++++++|
T Consensus 148 -r~liG~~lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p~~aFa~ft~~~ 226 (257)
T KOG1638|consen 148 -RFLIGVVLFVTGMLINIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLPALAFAFFTICN 226 (257)
T ss_pred -HHHHHHHHHHHHhhhhhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcceeccccC
Q 041039 241 LMGRSYITRTWYLCKFEHFPKHVKALFPYIF 271 (271)
Q Consensus 241 l~~rA~~~h~wY~~kF~~Yp~~RkalIPfI~ 271 (271)
+++||.++|+||+||||||||+|||+||||+
T Consensus 227 l~pRA~ahH~WY~~kFe~YPk~RkAlIPfvf 257 (257)
T KOG1638|consen 227 LGPRAYAHHKWYLKKFEDYPKNRKALIPFVF 257 (257)
T ss_pred hhHHHHHHHHHHHHhhccCCccceeeccccC
Confidence 9999999999999999999999999999986
No 2
>PLN02392 probable steroid reductase DET2
Probab=100.00 E-value=2.3e-58 Score=414.34 Aligned_cols=230 Identities=24% Similarity=0.376 Sum_probs=188.3
Q ss_pred HHHHHHHHHhhhccccCCCCccccCccccccccCCccccccchhhHHhhhhHHHHHHHHHhhCCC-CchhHHHHHHHHHH
Q 041039 25 VFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPF-EGFRFRLLTSALTF 103 (271)
Q Consensus 25 ~~~~~~~~~~~~~~~~~ygk~~~~~~~~~~~~~~~~~~i~~r~~w~~~e~p~~~~~~~~~~~~p~-~~~~~~ll~~l~~l 103 (271)
+.++...+..++.+++||||+ .++ ++|+++|+|+||++||+|+++++++.+...++ .+..+.++++++++
T Consensus 17 ~~~~~~~~~~l~f~~apYGk~--~~~-------~~g~~vp~rlaW~lmE~P~~~~~~~~~~~~~~~~~~~~~vl~~lf~~ 87 (260)
T PLN02392 17 YLIGPPTFISLKFLQAPYGKH--NRL-------GWGPTVSPPLAWFLMESPTLWLTLLLFPLGQHFTNPKALLLMSPYLL 87 (260)
T ss_pred HHHHHHHHHHHHhcCcCcCCC--CCC-------CCCcCCCchHHHHHhhccHHHHHHHHHhcCccccccHHHHHHHHHHH
Confidence 334455667778899999999 332 47899999999999999999999866554433 34567899999999
Q ss_pred HHHHHHHhhhheeccc------CCcchhhHHHHHHHHHHHHHHHHhhhc-----c-cchhhhccCCchhhHHHHHHHHHH
Q 041039 104 HFFKRIFEVLFIHKYS------GGMVLDSAIVVSLGYVITTTTMIYIQR-----L-SQREELILDQPTIDLKFVGIILFC 171 (271)
Q Consensus 104 Hy~~R~~e~~fv~~~s------~~m~~~~~~~~~~~y~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~~~~~g~~lf~ 171 (271)
||+||++++|++.+.+ ++||+...+++ +.++.+|+|.|+ . .++++++.. ....++|+++|+
T Consensus 88 HY~~Ra~i~Pl~~~~~~~~~~~~p~p~~i~~~a----~~F~~~Ng~lq~~wl~~~~~~y~~~~~~---~~~~~iG~~lF~ 160 (260)
T PLN02392 88 HYFHRTCIYPLRLYRSTSQQNTKGFPVSMALLA----FGFNLLNAYLQARWVSHYKDDYEDGGWF---WWRFFGGLVVFL 160 (260)
T ss_pred HHHhHHHhhhhhccccccccCCCCccHHHHHHH----HHHHHHHHHHHHHHHhccCCcCCCcccc---cHHHHHHHHHHH
Confidence 9999999999976543 25665554444 445555555553 1 111111111 125789999999
Q ss_pred HHHHhHHHHHHHHHhcccCCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041039 172 LGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTW 251 (271)
Q Consensus 172 ~g~~~n~~~~~~L~~LR~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~l~~rA~~~h~w 251 (271)
+|+.+|++||.+|++|||+| ++|+||+||+|+|||||||+|||+||+|++++++++.+++|++++++||.+||.++|||
T Consensus 161 ~g~~~N~~sh~~L~~LRk~g-~~Y~iP~GGlF~~VscPnYf~EileW~gfal~t~s~~~~~F~~~~~~nl~~rA~~~hkw 239 (260)
T PLN02392 161 WGMRINVWSDRVLVGLKREG-GGYKVPRGGWFELVSCPNYFGEIVEWLGWAVMTWSWAGFGFFLYTCSNLVPRACANHKW 239 (260)
T ss_pred HHHHHHHHHHHHHHhcccCC-CeeECCCCCCcCeEcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988 79999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc-ccCCCCcceeccccC
Q 041039 252 YLCKF-EHFPKHVKALFPYIF 271 (271)
Q Consensus 252 Y~~kF-~~Yp~~RkalIPfI~ 271 (271)
|+||| |||||+|||+||||+
T Consensus 240 Y~~kFg~~ypk~RkaiIPfi~ 260 (260)
T PLN02392 240 YLEKFGEDYPKGRKAVIPFLY 260 (260)
T ss_pred HHHHccccccCCCeEecCccC
Confidence 99999 699999999999986
No 3
>PLN02560 enoyl-CoA reductase
Probab=100.00 E-value=2.2e-54 Score=399.35 Aligned_cols=211 Identities=19% Similarity=0.259 Sum_probs=183.5
Q ss_pred cccCCccccccchhhHHhhhhHHHHHHHHHhhCC-----------CCchhHHHHHHHHHHHHHHHHHhhhheeccc-CCc
Q 041039 55 SAKKKEINISSKIGMLLFYTPSFFAGLASLWLCP-----------FEGFRFRLLTSALTFHFFKRIFEVLFIHKYS-GGM 122 (271)
Q Consensus 55 ~~~~~~~~i~~r~~w~~~e~p~~~~~~~~~~~~p-----------~~~~~~~ll~~l~~lHy~~R~~e~~fv~~~s-~~m 122 (271)
-.||.|+||+||+++++||++++++.+++++..+ ..+..+.++++++++||+||++||+||||+| ++|
T Consensus 79 y~kDLGpQi~wrtVF~~EY~GPl~i~~l~y~~~~~y~~~~~~~~~~~~~~~~l~~~~~~~Hy~kR~~Et~fvhrfS~~tm 158 (308)
T PLN02560 79 VFKDLGPQVSYRTLFFFEYLGPLLIYPLFYFFPQVYKYFGYPARRVIHPVQTYAMYYWCFHYAKRILETFFVHRFSHATS 158 (308)
T ss_pred EEEeCCCcCchhhhHHHHhhhHHHHHHHHHHhhhhhcccccCcCCCCchHHHHHHHHHHHHHHHHhhheeeeEeecCCCc
Confidence 4568999999999999999999999886654111 1134678889999999999999999999999 899
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhcccchhhhccCCchhhHHHHHHHHHHHHHHhHHHHHHHHHhcccC-CCccccccccC
Q 041039 123 VLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRN-GEKEYRIPTGG 201 (271)
Q Consensus 123 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~-~~~~y~iP~gg 201 (271)
|+.+.+.+|++||.++..++|....... +.+...+.++|+++|++|+.+|+++|.+|++||++ |+++|+||+||
T Consensus 159 pl~n~~~n~~~Yw~~~~~~~y~~~~~~~-----~~~~~~~~~~g~~lf~~~~~~N~~~h~~L~~LR~~~g~~~y~IP~g~ 233 (308)
T PLN02560 159 PLFNVFRNCAYYWTFGAYIAYFVNHPLY-----TPVSETQMKVGFGFGLVCQLANFYCHIILRNLRKPDGKGGYQIPRGF 233 (308)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcccCCc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCeeCCCCC
Confidence 9999999999999988777664422211 12223356899999999999999999999999998 99999999999
Q ss_pred cccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------CCCCcceecccc
Q 041039 202 LFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEH------FPKHVKALFPYI 270 (271)
Q Consensus 202 lF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~l~~rA~~~h~wY~~kF~~------Yp~~RkalIPfI 270 (271)
+|++||||||++||++|+||+++++++++++|+++++++|.+||.++||||+++|+| |||+|++++||+
T Consensus 234 lF~~VscPnY~~Ei~~W~gf~~~t~~~~~~~F~~~~~~~m~~wA~~kh~~Y~k~F~d~~~~~~yp~~~~~~pp~~ 308 (308)
T PLN02560 234 LFNYVTCANYTTEIYQWLGFNIATQTVAGYLFLAVAAAIMTNWALAKHRRLKKLFDGKDGRPKYPRRWVILPPFL 308 (308)
T ss_pred CcCeecCCcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccCCCceEeCCCcC
Confidence 999999999999999999999999999999999999999999999999999999966 999777777764
No 4
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional
Probab=100.00 E-value=6e-46 Score=340.56 Aligned_cols=178 Identities=26% Similarity=0.500 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeccc--CCcchhhHHHHHHHHHHHHHHHHh--hhcc------------cchhhhc---
Q 041039 94 FRLLTSALTFHFFKRIFEVLFIHKYS--GGMVLDSAIVVSLGYVITTTTMIY--IQRL------------SQREELI--- 154 (271)
Q Consensus 94 ~~ll~~l~~lHy~~R~~e~~fv~~~s--~~m~~~~~~~~~~~y~~~~~~~~~--~~~~------------~~~~~~~--- 154 (271)
..+++.|+.+|.+||++||.||+++| ++||+.+++.|..+|++.++.+.. .... ..+....
T Consensus 114 ~~~~l~L~~lq~lRRLyEslfVskfS~~SrMhl~hYlvGl~fY~~~~lsl~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~ 193 (323)
T PLN03164 114 SVFLLLLMEIHVLRRLYESLYVFKYSPSARMHILGYLTGLFFYVAAPLSLCCNCAPEVAKFVGNQVAEFIVKGKSAMSAI 193 (323)
T ss_pred HHHHHHHHHHHHHHHHHheeeEEecCCcceeeHHHHHHHHHHHHHHHHHHHhccchhhhhhhcccchhhccccccccccc
Confidence 45677999999999999999999988 589999999999999987765421 0000 0000000
Q ss_pred ------cCCchh---hHHHHHHHHHHHHHHhHHHHHHHHHhcc--cCCCccccccccCcccccccccchhHHHHHHHHHH
Q 041039 155 ------LDQPTI---DLKFVGIILFCLGISGNFYHHYLLSRMR--RNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFF 223 (271)
Q Consensus 155 ------~~~p~~---~~~~~g~~lf~~g~~~n~~~~~~L~~LR--~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al 223 (271)
...|.. ...++|+++|++|+..|++||.+|++|| ++++++|+||+||+|++||||||++||++|+|+++
T Consensus 194 ~~~~~~~~~~~~~l~~~q~iGl~lFlig~~~n~~~H~iLa~LR~~k~~~~~Y~IP~GglF~~VSCPHYf~EIliw~gfal 273 (323)
T PLN03164 194 EFDWWDFVSPLMKLGWFQWIGAAIFLWGWIHQYRCHAILGSLREHKKQADEYVIPYGDWFEMVSCPHYLAEIVIYAGLLI 273 (323)
T ss_pred ccchHhhhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCCCCCceEECCCCCCcCeEcCCcHHHHHHHHHHHHH
Confidence 001111 1258999999999999999999999999 56788999999999999999999999999999999
Q ss_pred Hhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcceeccccC
Q 041039 224 ISQ--TLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF 271 (271)
Q Consensus 224 ~~~--~~~~~~~~~~~~~~l~~rA~~~h~wY~~kF~~Yp~~RkalIPfI~ 271 (271)
+++ +...+++++++++||.++|.++||||+|||+||||+|||+||||+
T Consensus 274 ~t~~~~~~~~l~~~~v~~nL~~~A~~tHkWY~kkF~dYPk~RkAIIPfI~ 323 (323)
T PLN03164 274 ASGGTDLTIWLLFGFVVANLTFAAAETHRWYLQKFENYPRNRYAIIPFVY 323 (323)
T ss_pred HHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceEecCccC
Confidence 987 355678889999999999999999999999999999999999986
No 5
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-46 Score=328.59 Aligned_cols=210 Identities=24% Similarity=0.335 Sum_probs=186.5
Q ss_pred cccCCccccccchhhHHhhhhHHHHHHHHHhhCCC--------CchhHHHHHHHHHHHHHHHHHhhhheeccc-CCcchh
Q 041039 55 SAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPF--------EGFRFRLLTSALTFHFFKRIFEVLFIHKYS-GGMVLD 125 (271)
Q Consensus 55 ~~~~~~~~i~~r~~w~~~e~p~~~~~~~~~~~~p~--------~~~~~~ll~~l~~lHy~~R~~e~~fv~~~s-~~m~~~ 125 (271)
-.||.|+||+||+++++||++++++.+.+++. |. ..+.++++..++++||.||++||.|||+|| ++||+.
T Consensus 75 ~vKDLGpQI~wrtvF~~EYlGPLlvy~~Fy~~-p~~vyg~~~~i~~~~~iA~~~~~~Hy~KRl~ET~FvhrFs~atmp~~ 153 (297)
T KOG1639|consen 75 YVKDLGPQISWRTVFFAEYLGPLLVYPLFYYR-PTLVYGKDAVIHPLQRIAFFLWLFHYGKRLLETIFVHRFSLATMPIF 153 (297)
T ss_pred EEeccCCccchhhhhHHHhhchHHhHhHHHhc-hheeechhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchH
Confidence 45689999999999999999999998865543 42 234678999999999999999999999999 999999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccchhhhccCCchh--hHHHHHHHHHHHHHHhHHHHHHHHHhcccCCCccccccc--cC
Q 041039 126 SAIVVSLGYVITTTTMIYIQRLSQREELILDQPTI--DLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPT--GG 201 (271)
Q Consensus 126 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~~~y~iP~--gg 201 (271)
+.+.+|.+||.++..++|..+... .+.|.. .+...|++.|++++.+|+++|..|++||..|+++.+||. |.
T Consensus 154 nlfKnC~~yw~~~~~vaYfvnhp~-----~t~~~~~~~~~~~~l~~fv~~el~NF~~HI~LR~lrp~g~k~r~ip~~~g~ 228 (297)
T KOG1639|consen 154 NLFKNCFYYWGFSALVAYFVNHPL-----FTPPKLGKLQVKLGLGGFVLCELGNFSCHILLRNLRPAGSKKRRIPLPDGF 228 (297)
T ss_pred HHHHhhHHHHHHHHHHHHHhcCCC-----CCCcchhhhhhhhhhHHHhhhhhcceeeEeehhhccCCcCccceeecCCcc
Confidence 999999999999888877543322 334433 457899999999999999999999999999988888775 56
Q ss_pred cccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcceecccc
Q 041039 202 LFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYI 270 (271)
Q Consensus 202 lF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~l~~rA~~~h~wY~~kF~~Yp~~RkalIPfI 270 (271)
+|++||||||+.|+..|+||+++++++++++|....+..|..+|..+|+.|+|+|+|||++|+.+|||+
T Consensus 229 lFnlvscpNYt~Ev~sWi~F~i~tq~l~a~lFl~vg~aqMtiWA~~Kh~~ylKeFp~Ypr~r~~iiPFv 297 (297)
T KOG1639|consen 229 LFNLVSCPNYTYEVGSWIGFAIMTQCLAAYLFLTVGAAQMTIWAKGKHRRYLKEFPDYPRRRKIIIPFV 297 (297)
T ss_pred EEEEEecCCcceehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHhhhcccCCccccccCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999996
No 6
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1.3.99.5 from EC catalyse the conversion of 3-oxo-5-alpha-steroid + acceptor to 3-oxo-delta(4)-steroid + reduced acceptor. The steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during foetal development []. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related steroid reductase enzyme, DET2, is found in plants such as Arabidopsis. Mutations in this enzyme cause defects in light-regulated development []. This domain is present in both type 1 and type 2 forms.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006629 lipid metabolic process, 0005737 cytoplasm, 0016021 integral to membrane
Probab=100.00 E-value=3.4e-42 Score=288.44 Aligned_cols=149 Identities=34% Similarity=0.664 Sum_probs=128.9
Q ss_pred CCcchhhHHHHHHHHHHHHHHHH-hhhcccchhhhccCCchhhHHHHHHHHHHHHHHhHHHHHHHHHhcccCCCcccccc
Q 041039 120 GGMVLDSAIVVSLGYVITTTTMI-YIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIP 198 (271)
Q Consensus 120 ~~m~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~~~y~iP 198 (271)
++||+.+.+.++.++..++.+.+ |.......+.+|..+ ...++|+++|++|+..|+++|.+|++||++++++|+||
T Consensus 1 ~~mpi~~~~~~~~f~~~ng~l~~~~~~~~~~~~~~~~~~---~~~~~g~~lf~~g~~~n~~~h~~L~~lr~~~~~~y~iP 77 (150)
T PF02544_consen 1 NTMPISNVFMNCFFWVLNGYLIGYYLSYYAPYQYTWLPS---PRFIIGLALFLIGSIGNFYSHLILANLRKPGSKKYKIP 77 (150)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhh---HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCceeCC
Confidence 47999999999996656655443 332222211222222 24689999999999999999999999999999999999
Q ss_pred ccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcceeccccC
Q 041039 199 TGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF 271 (271)
Q Consensus 199 ~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~l~~rA~~~h~wY~~kF~~Yp~~RkalIPfI~ 271 (271)
+||+|++|+||||++||++|+|++++++++++.++++++++||.+||.++|+||+|||+||||+||++||||+
T Consensus 78 ~gg~F~~vscP~Y~~Eil~w~~f~l~~~~~~~~~f~~~~~~~l~~~A~~~h~wY~~~F~~yp~~R~~lIPfi~ 150 (150)
T PF02544_consen 78 KGGLFEYVSCPHYFFEILIWIGFALLTGSWPSYAFALFVVVNLSPRAVQTHRWYKKKFKEYPKNRKALIPFIF 150 (150)
T ss_pred CCCCcceeeehhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHCccccCCCeEecCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996
No 7
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-36 Score=268.82 Aligned_cols=176 Identities=29% Similarity=0.539 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhheeccc--CCcchhhHHHHHHHHHHHHHH-HHhhhcccchhhhccCCchhhHHHHHHHHH
Q 041039 94 FRLLTSALTFHFFKRIFEVLFIHKYS--GGMVLDSAIVVSLGYVITTTT-MIYIQRLSQREELILDQPTIDLKFVGIILF 170 (271)
Q Consensus 94 ~~ll~~l~~lHy~~R~~e~~fv~~~s--~~m~~~~~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~g~~lf 170 (271)
..+++.+...|..||.+|+.|+..++ ++|.+.+++.+..+|...... +...++...++.. ..-.....++|.++|
T Consensus 124 ~~~~~l~~s~~~~rrlYet~fv~~~~~~s~mnl~hy~vg~V~y~vl~~~l~~~~~g~~~~~~~--~~l~~i~q~~g~~iF 201 (304)
T KOG1640|consen 124 LQVLLLIYSLHTLRRLYETLFVLVYSVNSKMNLGHYLVGYVFYTVLSLALLLCTNGSSEGPNF--NSLSSILQWLGLGIF 201 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeeccccchhhHHHHHHHHHHHHHHHHHhhcccccCchh--hhHHHHHHHHHHHHH
Confidence 45667788999999999999999998 899999999999999765433 3333333322100 000112579999999
Q ss_pred HHHHHhHHHHHHHHHhcccCC--CccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 041039 171 CLGISGNFYHHYLLSRMRRNG--EKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYIT 248 (271)
Q Consensus 171 ~~g~~~n~~~~~~L~~LR~~~--~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~l~~rA~~~ 248 (271)
++|...|..||.||.|+||.+ .++|.||+||+|++||||||++||++|.|++.....+.-++.+.|+++|++-.|.++
T Consensus 202 ~i~s~~Qy~~h~iL~nlrk~~~~~~~~~ip~g~~F~~Vs~Ph~L~Ei~iY~~ia~~~~~~~iwLv~~~V~~N~t~aA~~T 281 (304)
T KOG1640|consen 202 AIGSIHQYASHEILGNLRKYPRQAKAYLIPKGGWFKLVSCPHYLAEIIIYVGIALGAPDLTIWLVFGWVAANLTYAALET 281 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhheecCCCCEeeecCChHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999875 468999999999999999999999999999988888888899999999999999999
Q ss_pred HHHHHHhcccCCCCcceeccccC
Q 041039 249 RTWYLCKFEHFPKHVKALFPYIF 271 (271)
Q Consensus 249 h~wY~~kF~~Yp~~RkalIPfI~ 271 (271)
|+||++||+|||++|+|+|||++
T Consensus 282 h~wY~~kF~~yp~~R~AiiPfl~ 304 (304)
T KOG1640|consen 282 HRWYLKKFENYPKNRHAIIPFLY 304 (304)
T ss_pred HHHHHHhhccCcccccccccccC
Confidence 99999999999999999999986
No 8
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
Probab=99.68 E-value=1.4e-15 Score=136.19 Aligned_cols=68 Identities=24% Similarity=0.427 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHhcccCCCccccccccCcccccccccchhHHHHHHHHHHHhhhH
Q 041039 161 DLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTL 228 (271)
Q Consensus 161 ~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~ 228 (271)
...++|+++|++|+.++..+|.|+.+.|++++++.++.+.|+|+|++|||||||++.|+|+++++.+.
T Consensus 119 ~~~~~g~~l~~~g~~~E~~AD~Q~~~fk~~~~n~g~~~~~GLw~~sRHPNYfGE~l~W~g~~~~a~~~ 186 (235)
T PF06966_consen 119 WLDILGIALFLIGFLLETVADQQKYRFKKDPANKGKFCTTGLWRYSRHPNYFGEILFWWGIYLAAISS 186 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCccccCCeeeeeeCchHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999999988643
No 9
>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only]
Probab=99.61 E-value=1.4e-14 Score=128.52 Aligned_cols=110 Identities=15% Similarity=0.248 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHhcccCCCccccccccCcccccccccchhHHHHHHHHHHHhhhHH-------HHHH
Q 041039 161 DLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLY-------AFCN 233 (271)
Q Consensus 161 ~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~-------~~~~ 233 (271)
...++|+++|++|...+...|.||.++|+++++++|+.+.|+|+|.+|||||||.+.|+|+.+++-+-. +.+.
T Consensus 148 ~~d~~g~~iwivg~~fE~lgD~QL~~Fk~~P~nkgkll~~GLWr~tRHPNYFgE~l~Wwg~~Lia~~~~~~~W~~~sPll 227 (272)
T COG3752 148 WWDVIGLAIWIVGIVFEALGDAQLWVFKKDPRNKGKLLDTGLWRWTRHPNYFGEALVWWGFYLIAISEWLLLWAVASPLL 227 (272)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhChhhccccccccceecccCcchHHHHHHHHHHHHHHHhhhhHhhhcccHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999874311 1122
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHhcccCCCCcceecccc
Q 041039 234 ALGVTFYLMG--RSYITRTWYLCKFEHFPKHVKALFPYI 270 (271)
Q Consensus 234 ~~~~~~~l~~--rA~~~h~wY~~kF~~Yp~~RkalIPfI 270 (271)
..+-+....+ +-.++...-|++|++|.++..++.|++
T Consensus 228 mt~LL~~vSGvp~l~ekm~k~r~~fr~Yq~rt~~F~P~~ 266 (272)
T COG3752 228 MTWLLVHVSGVPPLEEKMLKSRPGFREYQRRTNAFFPRP 266 (272)
T ss_pred HHHHHHHhcCCChHHHHHhcccHhHHHHHHHhcccCCCC
Confidence 2222222222 222222233478899999999999985
No 10
>KOG4650 consensus Predicted steroid reductase [General function prediction only]
Probab=99.04 E-value=9.5e-09 Score=91.62 Aligned_cols=108 Identities=15% Similarity=0.248 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcc---cCCCcccc-ccccCcccccccccchhHHHHHHHHHHHhhhH------HHH
Q 041039 162 LKFVGIILFCLGISGNFYHHYLLSRMR---RNGEKEYR-IPTGGLFDKVVCPHYLFELIEFWGIFFISQTL------YAF 231 (271)
Q Consensus 162 ~~~~g~~lf~~g~~~n~~~~~~L~~LR---~~~~~~y~-iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~------~~~ 231 (271)
.+.+|..+|+.|..++..+|.|+-+.+ ++.++..| -.+-|+|+|++||||+||-+.|.|+.+.+... ...
T Consensus 176 wD~I~~~m~~~gfvie~~ADqQ~~~f~~~~~~l~~~Gk~~~d~GlwrySRHPNylgEqL~Wwglyvfa~~~~egl~wtvi 255 (311)
T KOG4650|consen 176 WDVIGWTMWVFGFVIEALADQQKLSFKEARYDLENLGKGWCDVGLWRYSRHPNYLGEQLLWWGLYVFAAPVLEGLEWTVI 255 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHhhhcCHHHcCCccccccceeeccCccHHHHHHHHHHHHHHHhhhhccchHHHH
Confidence 478999999999999999999998886 44444444 78899999999999999999999999987531 111
Q ss_pred HHHHHHHHHHHH-HHHHHH--HHHHHhcccCCCCcceecccc
Q 041039 232 CNALGVTFYLMG-RSYITR--TWYLCKFEHFPKHVKALFPYI 270 (271)
Q Consensus 232 ~~~~~~~~~l~~-rA~~~h--~wY~~kF~~Yp~~RkalIPfI 270 (271)
.-..++.+-+.. +-.+.. +.|. -++.|.|....+||..
T Consensus 256 ~~lv~~~~l~~~t~lie~~~v~~~~-aYR~Yqktts~~ip~~ 296 (311)
T KOG4650|consen 256 AGLVFLTLLLLFTSLIELLEVEKYP-AYRVYQKTTSRFIPRL 296 (311)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhH-HHHHHHhccccccccc
Confidence 122222222221 111111 1111 3357888889999864
No 11
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis. They act by reducing double bonds in precursors of ergosterol []. These proteins are highly hydrophobic and seem to contain seven or eight transmembrane regions. Chicken lamin B receptor that is thought to anchor the lamina to the inner nuclear membrane belongs to this family.; GO: 0016020 membrane
Probab=98.86 E-value=8e-09 Score=100.24 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcccCCC-------------ccccccccCcccccccccchhHHHHHHHHHHHhh--h
Q 041039 163 KFVGIILFCLGISGNFYHHYLLSRMRRNGE-------------KEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQ--T 227 (271)
Q Consensus 163 ~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~-------------~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~--~ 227 (271)
...-.+++++|.+++-.+|.|..+.|++++ ++-++-..|+|.+++||||+||+++=+++++.++ +
T Consensus 304 ~~~i~~l~~~gy~i~r~sn~QK~~FR~~p~~p~~~~~~~~~t~~G~~LL~SGwWg~~Rh~NY~gdil~a~aw~l~~gf~~ 383 (432)
T PF01222_consen 304 AAAILALGLVGYYIFRGSNSQKNRFRRNPKDPKVIHLKYIPTKRGSKLLVSGWWGIARHPNYLGDILMALAWCLPCGFSS 383 (432)
T ss_pred HHHHHHHHHHHHHHHHHhchhHHHhcCCCCCCcccccceeecCCCCeEEEcChhHhhcccchHHHHHHHHHHHHHHhcCc
Confidence 344567889999999999999999997642 2334555799999999999999999999998876 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHhcccCCCC-cceeccccC
Q 041039 228 LYAFCNALGVTFYLMGRSYITRT----WYLCKFEHFPKH-VKALFPYIF 271 (271)
Q Consensus 228 ~~~~~~~~~~~~~l~~rA~~~h~----wY~~kF~~Yp~~-RkalIPfI~ 271 (271)
.......++.+.-+.-||.+.++ .|.+.+++|-++ +..+||+|+
T Consensus 384 ~~pyfy~~~~~~lL~hR~~RD~~rC~~KYG~~W~~Yc~~Vpy~~iP~iy 432 (432)
T PF01222_consen 384 ILPYFYPIFFTILLIHRARRDEERCRKKYGKDWDEYCKRVPYRIIPGIY 432 (432)
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHhhCHHHHHHHHhCCEEEeCCcC
Confidence 44555667777788899987655 455555678665 899999986
No 12
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2.1.1.16 from EC) has a broad substrate specificity of unsaturated phospholipids [].; GO: 0008170 N-methyltransferase activity, 0006644 phospholipid metabolic process
Probab=98.73 E-value=1.6e-07 Score=73.34 Aligned_cols=97 Identities=21% Similarity=0.276 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcccCC-----CccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHH-
Q 041039 163 KFVGIILFCLGISGNFYHHYLLSRMRRNG-----EKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALG- 236 (271)
Q Consensus 163 ~~~g~~lf~~g~~~n~~~~~~L~~LR~~~-----~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~- 236 (271)
.++|+++.+.|......+...+++-+... ++..++-++|.|++|+||=|+|.++.++|.+++.+++..++....
T Consensus 3 ~~~G~~l~~~g~~l~~~~~~~l~~~~~~~~~~~~~~~~~Lvt~G~Y~~vRhPmY~g~~l~~~G~~l~~~s~~~l~~~~~~ 82 (106)
T PF04191_consen 3 FVLGLLLILAGIALAIWAFKALGRFGTYYGDFFGREPQRLVTTGPYRYVRHPMYLGFLLILLGIALMLGSWLGLLLAVLA 82 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeecCCcccccCCcccccCCccCcCChHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 57899999999999999988887766431 344567889999999999999999999999999988876554433
Q ss_pred HHHHHHHHHHHHHHHHHHhc-ccC
Q 041039 237 VTFYLMGRSYITRTWYLCKF-EHF 259 (271)
Q Consensus 237 ~~~~l~~rA~~~h~wY~~kF-~~Y 259 (271)
.+...........++-+++| |||
T Consensus 83 ~~~~~~~~~~~EE~~L~~~fG~~Y 106 (106)
T PF04191_consen 83 FLLYYIFIIRFEERFLERRFGEEY 106 (106)
T ss_pred HHHHHHHHHHhHHHHHHHHhCcCC
Confidence 33333333335566778888 666
No 13
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.44 E-value=1.8e-06 Score=74.90 Aligned_cols=109 Identities=22% Similarity=0.280 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcc---cCCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 041039 162 LKFVGIILFCLGISGNFYHHYLLSRMR---RNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVT 238 (271)
Q Consensus 162 ~~~~g~~lf~~g~~~n~~~~~~L~~LR---~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~ 238 (271)
...+|+.++.+|...-..++.++.+=. -+.++++++-++|.|++|+||=|++.++..+|..+...++.+.+.+....
T Consensus 69 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LVttG~Y~~VRHP~Y~~~~l~~~g~~~~~~~~~~l~~~~~~~ 148 (187)
T COG2020 69 IVGLGLLLVGLGLALRLWAMRTLGRSWTVSVKARKGHELVTTGPYSIVRHPIYLGLLLFALGTGLLLGSLWALLIFVVLV 148 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCeeEecCCcceecCcHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 457788888888888877777664421 12356888999999999999999999999999998888888766555544
Q ss_pred HHH-HHHHHHHHHHHHHhc----ccCCCCcceecccc
Q 041039 239 FYL-MGRSYITRTWYLCKF----EHFPKHVKALFPYI 270 (271)
Q Consensus 239 ~~l-~~rA~~~h~wY~~kF----~~Yp~~RkalIPfI 270 (271)
..+ ..|+....+.-+++| +||.++.+..||.+
T Consensus 149 ~~~~~~~i~~EEr~L~~~fg~~Y~~Y~~rV~r~iP~~ 185 (187)
T COG2020 149 ALLFLFRIREEERYLRAEFGDEYREYRKRVPRLIPPL 185 (187)
T ss_pred HHHHHHHhhHHHHHHHHHhhHHHHHHHHhCCccCCCC
Confidence 444 566666666666777 46888999999976
No 14
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.37 E-value=3.1e-07 Score=87.62 Aligned_cols=108 Identities=18% Similarity=0.229 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhcccCC-------------CccccccccCcccccccccchhHHHHHHHHHHHhh--hH
Q 041039 164 FVGIILFCLGISGNFYHHYLLSRMRRNG-------------EKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQ--TL 228 (271)
Q Consensus 164 ~~g~~lf~~g~~~n~~~~~~L~~LR~~~-------------~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~--~~ 228 (271)
..-.++.+.|..++-.+|.|..++||++ +++-+.-..|+|.+++||||+||+++=+++++.++ +.
T Consensus 301 ~~i~~l~l~gyyifr~an~QK~~FRkn~~~~~~~~i~~i~t~~Gs~LL~SGwWG~aRh~nY~gD~i~alawslp~gf~s~ 380 (428)
T KOG1435|consen 301 VGILVLLLLGYYIFRGANAQKNEFRKNPGDPKLKNIKTIYTSTGSKLLVSGWWGVARHPNYLGDLIMALAWSLPCGFNSP 380 (428)
T ss_pred HHHHHHHHhheeEeeccchhHHHHhcCCCCCccccccceEeccCCeEEeechhhhhcCcCcHHHHHHHHHHHHhccCCCC
Confidence 3445777889999999999999999873 23556666899999999999999999999999875 33
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHhcccCCC-CcceeccccC
Q 041039 229 YAFCNALGVTFYLMGRSYIT----RTWYLCKFEHFPK-HVKALFPYIF 271 (271)
Q Consensus 229 ~~~~~~~~~~~~l~~rA~~~----h~wY~~kF~~Yp~-~RkalIPfI~ 271 (271)
.+....++...-+.-||.+. +..|.+.+++|-+ -+.++||+|+
T Consensus 381 lpyfy~iyf~~LLvhR~~RDe~rC~~KYG~~W~~Yc~~VpyriiP~Vy 428 (428)
T KOG1435|consen 381 LPYFYPIYFTLLLVHRAARDEHRCRSKYGEDWEEYCRKVPYRILPYVY 428 (428)
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHHHHHhhhHHHHHhhCCcccCCCCC
Confidence 34444566666677776532 3478888888854 5999999986
No 15
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2.1.1.100 from EC) carries out carboyxl methylation of cleaved eukaryotic proteins that terminate in a CaaX motif. In Saccharomyces cerevisiae (Baker's yeast) this methylation is carried out by Ste14p, an integral endoplasmic reticulum membrane protein. Ste14p is the founding member of the isoprenylcysteine carboxyl methyltransferase (ICMT) family, whose members share significant sequence homology [].; GO: 0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity, 0006481 C-terminal protein methylation, 0016021 integral to membrane; PDB: 4A2N_B.
Probab=97.75 E-value=0.00024 Score=55.05 Aligned_cols=79 Identities=22% Similarity=0.124 Sum_probs=42.1
Q ss_pred HHHHHHHHhHHHHHHHHHhccc---CCCccccccccCcccccccccchhHHHHHHHHHHHhhhH--HHHHHHHHHHHHHH
Q 041039 168 ILFCLGISGNFYHHYLLSRMRR---NGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTL--YAFCNALGVTFYLM 242 (271)
Q Consensus 168 ~lf~~g~~~n~~~~~~L~~LR~---~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~--~~~~~~~~~~~~l~ 242 (271)
+++++|...-..+...|.+-=. ...+++++=+.|.|++|+||||++-++..+|...+..+. .+.++.......+.
T Consensus 3 ~~~i~g~~lr~~a~~~LG~~ft~~v~~~~~h~lVt~GpY~~vRHP~Y~g~~~~~~~~~~ll~~~~~~~~~~~~~~~~~l~ 82 (94)
T PF04140_consen 3 GLFIAGQLLRYWAIRTLGRYFTHRVIIQPGHKLVTSGPYRYVRHPSYLGNIIWELGGQLLLFNAWLTALILFALVAWLLF 82 (94)
T ss_dssp --HHHHHHHHHHHHHHHGGG--SS--EETT-----SSTTTTBSSHHHHH-HHHHHHHHHHHHT-HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHccccCcEEEEecCCCEEecccccccccCchHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3456666666666666532211 113467788999999999999999887777776665544 33333333333444
Q ss_pred HHHH
Q 041039 243 GRSY 246 (271)
Q Consensus 243 ~rA~ 246 (271)
.|..
T Consensus 83 ~RI~ 86 (94)
T PF04140_consen 83 VRIR 86 (94)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 16
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.25 E-value=0.0019 Score=56.03 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=57.4
Q ss_pred CCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc-c---cCCCCcc
Q 041039 190 NGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFY-LMGRSYITRTWYLCKF-E---HFPKHVK 264 (271)
Q Consensus 190 ~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~-l~~rA~~~h~wY~~kF-~---~Yp~~Rk 264 (271)
+++.++++-+.|.++|++||-|.|=.+.++|--++..+..+.++.++++.+ ...|+....+--.+-| + ||.|+-.
T Consensus 115 ~k~~~h~lv~~GvY~y~RHPsY~g~flw~~gtq~~L~npis~v~f~~V~w~ff~~Ri~~EE~~Li~fFg~~Y~eY~kkV~ 194 (201)
T KOG2628|consen 115 KKVSDHKLVTSGVYAYVRHPSYVGFFLWAAGTQTMLCNPISLVAFLLVVWRFFADRIKEEEKYLISFFGSSYVEYAKKVP 194 (201)
T ss_pred ccccCceeEeccchhheeCchHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhhHHHHHHHHhCC
Confidence 345678899999999999999999999999998877766666555555544 4666655444334444 3 5666544
Q ss_pred eecccc
Q 041039 265 ALFPYI 270 (271)
Q Consensus 265 alIPfI 270 (271)
.=|||+
T Consensus 195 sGiPfi 200 (201)
T KOG2628|consen 195 SGIPFI 200 (201)
T ss_pred cCCCCC
Confidence 448886
No 17
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.47 E-value=0.035 Score=47.13 Aligned_cols=88 Identities=17% Similarity=0.255 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcccCC---CccccccccCcccccccccchh-HHHHHHHHHHHhhhHHH-HHHHHHH
Q 041039 163 KFVGIILFCLGISGNFYHHYLLSRMRRNG---EKEYRIPTGGLFDKVVCPHYLF-ELIEFWGIFFISQTLYA-FCNALGV 237 (271)
Q Consensus 163 ~~~g~~lf~~g~~~n~~~~~~L~~LR~~~---~~~y~iP~gglF~~Vs~PnY~~-Eil~w~g~al~~~~~~~-~~~~~~~ 237 (271)
-++|+++++..+..-..+-..|-+.-.-+ -.++++-+.|+|+++.||||+- =+.|=+|..+.++.+.. +++...-
T Consensus 71 ~~~gl~~~l~s~~ll~~vi~~LG~iWttki~ilP~h~~v~sglfk~~kHPNYflnIipEligl~Ll~~A~~Ta~l~~p~y 150 (172)
T COG1755 71 SIIGLALLLFSQILLYWVIKSLGEIWTTKIMILPNHQIVRSGLFKTMKHPNYFLNIIPELIGLPLLCQAWYTALLFSPIY 150 (172)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhheeeEEEeCCceeeccccchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788888888777777776665443211 1245556789999999999999 77889999999987654 3444434
Q ss_pred HHHHHHHHHHHHH
Q 041039 238 TFYLMGRSYITRT 250 (271)
Q Consensus 238 ~~~l~~rA~~~h~ 250 (271)
+.-+..|-++..+
T Consensus 151 a~~L~vRIr~Eek 163 (172)
T COG1755 151 ALLLYVRIRQEEK 163 (172)
T ss_pred HHHHhhhhhHHHH
Confidence 4445555444333
No 18
>PLN02797 phosphatidyl-N-dimethylethanolamine N-methyltransferase
Probab=74.66 E-value=14 Score=31.23 Aligned_cols=74 Identities=19% Similarity=0.095 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhcccC-----CCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHH
Q 041039 164 FVGIILFCLGISGNFYHHYLLSRMRRN-----GEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVT 238 (271)
Q Consensus 164 ~~g~~lf~~g~~~n~~~~~~L~~LR~~-----~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~ 238 (271)
..+.+++.+|.+.|+.+-..|--=+.= |-.. ..-+|--|++.+.|-|-|+++..+|.++....- ..+.|++
T Consensus 67 l~~~~L~aiGq~Lv~ss~~~LG~tGTYlGdyFGilm-~~VT~FPFnv~~nPmY~GStl~fLg~al~~p~~---~~~lW~l 142 (164)
T PLN02797 67 LYFWPLFAFGQFLNFRVYQLLGEAGTYYGVRFGKNI-PWVTEFPFGVIRDPQYVGSILSLLACLSWVPFQ---YILLWCL 142 (164)
T ss_pred HHHHHHHHHhhHHHHHHHHHhCCceeeehhhhcccc-cccccCCCCCCCCcchhhHHHHHHHHHHHhhHH---HHHHHHH
Confidence 679999999999999998876533210 1111 123588899999999999999999999876222 3444554
Q ss_pred HHH
Q 041039 239 FYL 241 (271)
Q Consensus 239 ~~l 241 (271)
.+.
T Consensus 143 gYv 145 (164)
T PLN02797 143 GYV 145 (164)
T ss_pred HHH
Confidence 443
No 19
>PF13789 DUF4181: Domain of unknown function (DUF4181)
Probab=45.59 E-value=54 Score=25.71 Aligned_cols=54 Identities=19% Similarity=0.109 Sum_probs=30.0
Q ss_pred cccccccCcc--cccccccchhHHHHHHHHHHHhh----------hHHHHHHHHHHHHHHHHHHHH
Q 041039 194 EYRIPTGGLF--DKVVCPHYLFELIEFWGIFFISQ----------TLYAFCNALGVTFYLMGRSYI 247 (271)
Q Consensus 194 ~y~iP~gglF--~~Vs~PnY~~Eil~w~g~al~~~----------~~~~~~~~~~~~~~l~~rA~~ 247 (271)
+.+||+.+.| ++|..=|=.+|+..-+.+.++.. ..+......+.....+-||..
T Consensus 13 kl~i~k~~~~~~~~vn~~h~~~e~~i~i~~ii~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ra~m 78 (110)
T PF13789_consen 13 KLNIPKKKFFSYKHVNKLHKKGEWIIFIIFIILIFIFLFIFIFRFFYPYILIFLFLIILFCFRAFM 78 (110)
T ss_pred HcCCCCCcCCCCCchhHHHHHHHHHhhhhHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 4579998877 55655666666666555544431 122334444445555566643
No 20
>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2.7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane
Probab=29.59 E-value=2.3e+02 Score=24.57 Aligned_cols=42 Identities=19% Similarity=0.340 Sum_probs=26.6
Q ss_pred HHHHHhHHHHHHHHHhcccC---CCcccccc-ccCcccccccccch
Q 041039 171 CLGISGNFYHHYLLSRMRRN---GEKEYRIP-TGGLFDKVVCPHYL 212 (271)
Q Consensus 171 ~~g~~~n~~~~~~L~~LR~~---~~~~y~iP-~gglF~~Vs~PnY~ 212 (271)
++..+.....|..-+-+||+ +|.+.-|| +||..|...||=..
T Consensus 203 ~~~~i~~~~gdl~~S~~KR~~~iKD~g~lipghGg~lDr~d~~l~~ 248 (259)
T PF01148_consen 203 LLASIVEAFGDLFESAIKRDAGIKDSGNLIPGHGGILDRFDSLLFA 248 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccCcCCcccchHhHHHH
Confidence 33444555556555555554 45677788 58999999887443
No 21
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=25.76 E-value=3.5e+02 Score=25.04 Aligned_cols=17 Identities=18% Similarity=0.409 Sum_probs=13.5
Q ss_pred ccchhHHHHHHHHHHHh
Q 041039 209 PHYLFELIEFWGIFFIS 225 (271)
Q Consensus 209 PnY~~Eil~w~g~al~~ 225 (271)
..|+-+-+.|+|+.+..
T Consensus 45 ~~~l~~~~W~~G~~~~~ 61 (300)
T PF05653_consen 45 RSYLRRPLWWIGLLLMV 61 (300)
T ss_pred hHHHhhHHHHHHHHHHh
Confidence 47888889999987754
No 22
>PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins. NnrU is thought to be involved in the reduction of nitric oxide. The exact function of NnrU is unclear. It is thought however that NnrU and perhaps NnrT are required for expression of both nirK and nor [].
Probab=22.97 E-value=5e+02 Score=22.46 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=33.6
Q ss_pred cccccccccchhHHHHHHHHHHHh-hhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc-ccCC--CCcceecc
Q 041039 202 LFDKVVCPHYLFELIEFWGIFFIS-QTLYAF-CNALGVTFYLMGRSYITRTWYLCKF-EHFP--KHVKALFP 268 (271)
Q Consensus 202 lF~~Vs~PnY~~Eil~w~g~al~~-~~~~~~-~~~~~~~~~l~~rA~~~h~wY~~kF-~~Yp--~~RkalIP 268 (271)
.++.++||-+.+-. .|..--++. ++...+ +|..+...-+......++| ++ + ++++ +++-...|
T Consensus 96 i~r~~RHP~l~g~~-lWA~aHLl~nGd~~~~lLFg~~~~~al~~~~~~~rr--~~-~g~~~~~~~~~~s~~~ 163 (191)
T PF07298_consen 96 IYRITRHPMLLGVL-LWALAHLLANGDLASLLLFGGFLAWALIGIILIDRR--RR-FGDAWRAYPRRTSIWP 163 (191)
T ss_pred HHHHhcCchHHHHH-HHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHh--hc-cccccccccCCCCCCC
Confidence 89999999999955 465543433 344443 3444444444444333333 34 5 3333 23445555
No 23
>COG0573 PstC ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]
Probab=22.48 E-value=1.2e+02 Score=28.55 Aligned_cols=29 Identities=31% Similarity=0.595 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcccC
Q 041039 162 LKFVGIILFCLGISGNFYHHYLLSRMRRN 190 (271)
Q Consensus 162 ~~~~g~~lf~~g~~~n~~~~~~L~~LR~~ 190 (271)
....|++||++.+..|..+..+.++.|++
T Consensus 281 L~~~glvLfvitl~~n~~a~~i~~r~~~~ 309 (310)
T COG0573 281 LFALGLVLFVITLLLNILARYIVRRRRRK 309 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 46789999999999999999999888754
No 24
>PF15584 Imm44: Immunity protein 44
Probab=21.17 E-value=43 Score=25.94 Aligned_cols=21 Identities=33% Similarity=0.918 Sum_probs=15.8
Q ss_pred ccccccccCccc---------ccccccchh
Q 041039 193 KEYRIPTGGLFD---------KVVCPHYLF 213 (271)
Q Consensus 193 ~~y~iP~gglF~---------~Vs~PnY~~ 213 (271)
++.+||-.|.|+ ++-|||||-
T Consensus 21 SG~~iP~~GIwEPv~~~~~K~~~gc~NYf~ 50 (94)
T PF15584_consen 21 SGQEIPCDGIWEPVDAPKPKLNVGCPNYFL 50 (94)
T ss_pred cCCCcccCCeEccccCCCCccccCcchhhc
Confidence 567788888875 467999974
Done!