Your job contains 1 sequence.
>041042
MVQFNLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLV
PGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNM
MDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ
ARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI
LKFITAKLFDIPWTLERNLTIGEPIIDF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041042
(268 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093019 - symbol:SGP2 species:3702 "Arabidopsi... 832 5.0e-83 1
TAIR|locus:2160125 - symbol:SGP1 species:3702 "Arabidopsi... 730 3.2e-72 1
POMBASE|SPAC1565.06c - symbol:spg1 "GTPase Spg1" species:... 446 4.0e-42 1
ASPGD|ASPL0000066888 - symbol:spgA species:162425 "Emeric... 443 8.4e-42 1
DICTYBASE|DDB_G0291269 - symbol:spg1 "small GTPase" speci... 439 2.2e-41 1
SGD|S000004529 - symbol:TEM1 "GTP-binding protein of the ... 327 1.6e-29 1
UNIPROTKB|Q9UL26 - symbol:RAB22A "Ras-related protein Rab... 177 1.3e-13 1
UNIPROTKB|F1MHP4 - symbol:RAB22A "Uncharacterized protein... 175 2.1e-13 1
UNIPROTKB|A5GHL0 - symbol:RAB22A "Uncharacterized protein... 175 2.1e-13 1
MGI|MGI:105072 - symbol:Rab22a "RAB22A, member RAS oncoge... 172 4.4e-13 1
UNIPROTKB|P51154 - symbol:RAB22A "Ras-related protein Rab... 171 5.6e-13 1
SGD|S000001889 - symbol:SEC4 "Rab family GTPase essential... 171 5.6e-13 1
TAIR|locus:2042321 - symbol:RAB6A species:3702 "Arabidops... 170 7.1e-13 1
UNIPROTKB|Q5ZLB8 - symbol:RAB22A "Uncharacterized protein... 169 9.1e-13 1
FB|FBgn0031090 - symbol:Rab35 "Rab35" species:7227 "Droso... 168 1.2e-12 1
UNIPROTKB|I3LMP5 - symbol:RAB42 "Uncharacterized protein"... 166 1.9e-12 1
ZFIN|ZDB-GENE-041114-161 - symbol:rab22a "RAB22A, member ... 166 1.9e-12 1
UNIPROTKB|E2R5A5 - symbol:RAB31 "Uncharacterized protein"... 165 2.5e-12 1
FB|FBgn0015793 - symbol:Rab19 "Rab19" species:7227 "Droso... 164 3.2e-12 1
MGI|MGI:1914603 - symbol:Rab31 "RAB31, member RAS oncogen... 164 3.2e-12 1
RGD|628598 - symbol:Rab31 "RAB31, member RAS oncogene fam... 164 3.2e-12 1
TAIR|locus:2085084 - symbol:RABC2b "RAB GTPase homolog C2... 164 3.2e-12 1
UNIPROTKB|Q13636 - symbol:RAB31 "Ras-related protein Rab-... 163 4.4e-12 1
DICTYBASE|DDB_G0276007 - symbol:DDB_G0276007 "Rab GTPase"... 162 5.7e-12 1
UNIPROTKB|E1BTI1 - symbol:RAB31 "Uncharacterized protein"... 162 5.7e-12 1
WB|WBGene00004279 - symbol:rab-21 species:6239 "Caenorhab... 162 5.7e-12 1
TAIR|locus:2140045 - symbol:RABH1c "RAB GTPase homolog H1... 160 1.0e-11 1
TAIR|locus:2831859 - symbol:RABC2A "RAB GTPase homolog C2... 157 2.3e-11 1
UNIPROTKB|F1MBF6 - symbol:RAB6A "Uncharacterized protein"... 156 3.0e-11 1
UNIPROTKB|J9NYJ8 - symbol:RAB6A "Uncharacterized protein"... 156 3.0e-11 1
UNIPROTKB|F1SUT0 - symbol:RAB6A "Uncharacterized protein"... 156 3.0e-11 1
FB|FBgn0086913 - symbol:Rab26 "Rab26" species:7227 "Droso... 173 3.6e-11 1
DICTYBASE|DDB_G0275955 - symbol:rabH "Rab GTPase" species... 155 3.9e-11 1
ZFIN|ZDB-GENE-060825-25 - symbol:zgc:153788 "zgc:153788" ... 155 3.9e-11 1
CGD|CAL0002519 - symbol:SEC4 species:5476 "Candida albica... 154 5.2e-11 1
UNIPROTKB|P0CY31 - symbol:SEC4 "Ras-related protein SEC4"... 154 5.2e-11 1
TAIR|locus:2123010 - symbol:ARA7 species:3702 "Arabidopsi... 154 5.2e-11 1
UNIPROTKB|Q1KME6 - symbol:RAB6A "Ras-related protein Rab-... 153 6.8e-11 1
TAIR|locus:2153202 - symbol:RHA1 "RAB homolog 1" species:... 153 6.8e-11 1
WB|WBGene00004284 - symbol:rab-35 species:6239 "Caenorhab... 153 6.8e-11 1
ZFIN|ZDB-GENE-040426-2849 - symbol:rab6a "RAB6A, member R... 153 6.8e-11 1
UNIPROTKB|P51152 - symbol:RAB12 "Ras-related protein Rab-... 152 8.8e-11 1
ASPGD|ASPL0000015781 - symbol:srgH species:162425 "Emeric... 157 1.1e-10 1
DICTYBASE|DDB_G0291233 - symbol:rabA "Rab GTPase" species... 149 2.0e-10 1
GENEDB_PFALCIPARUM|PF11_0461 - symbol:Rab6 "PfRab6, GTPas... 151 2.3e-10 1
UNIPROTKB|Q8IHR8 - symbol:Rab6 "PfRab6, GTPase" species:3... 151 2.3e-10 1
ZFIN|ZDB-GENE-040801-62 - symbol:rab35 "RAB35, member RAS... 148 2.6e-10 1
UNIPROTKB|P20340 - symbol:RAB6A "Ras-related protein Rab-... 151 3.5e-10 1
UNIPROTKB|Q5RAV6 - symbol:RAB6A "Ras-related protein Rab-... 151 3.5e-10 1
MGI|MGI:894313 - symbol:Rab6a "RAB6A, member RAS oncogene... 151 3.5e-10 1
RGD|619737 - symbol:Rab6a "RAB6A, member RAS oncogene fam... 151 3.5e-10 1
SGD|S000004252 - symbol:YPT6 "Rab family GTPase" species:... 153 4.7e-10 1
ZFIN|ZDB-GENE-070620-7 - symbol:zgc:165464 "zgc:165464" s... 152 5.3e-10 1
UNIPROTKB|H3BTC6 - symbol:RAB40C "Ras-related protein Rab... 145 5.8e-10 1
DICTYBASE|DDB_G0268068 - symbol:rab6 "Rab GTPase" species... 150 6.1e-10 1
TAIR|locus:2079631 - symbol:RABA5b "RAB GTPase homolog A5... 153 6.1e-10 1
UNIPROTKB|B4DMK0 - symbol:RAB11B "cDNA FLJ61134, highly s... 144 7.5e-10 1
TAIR|locus:2024276 - symbol:RAB11c "RAB GTPase 11C" speci... 152 8.8e-10 1
TAIR|locus:2168469 - symbol:RABA2D "RAB GTPase homolog A2... 152 8.8e-10 1
UNIPROTKB|P55745 - symbol:RAB21 "Ras-related protein Rab-... 153 1.0e-09 1
UNIPROTKB|Q9UL25 - symbol:RAB21 "Ras-related protein Rab-... 153 1.2e-09 1
UNIPROTKB|F1N8I9 - symbol:RAB6A "Ras-related protein Rab-... 142 1.3e-09 1
UNIPROTKB|G3MZN2 - symbol:RAB31 "Uncharacterized protein"... 142 1.3e-09 1
UNIPROTKB|Q17R06 - symbol:RAB21 "Ras-related protein Rab-... 152 1.3e-09 1
UNIPROTKB|F1SH25 - symbol:RAB21 "Uncharacterized protein"... 152 1.3e-09 1
MGI|MGI:894308 - symbol:Rab21 "RAB21, member RAS oncogene... 152 1.3e-09 1
RGD|1303150 - symbol:Rab21 "RAB21, member RAS oncogene fa... 152 1.4e-09 1
UNIPROTKB|Q5F3R8 - symbol:RAB11B "Uncharacterized protein... 151 1.5e-09 1
UNIPROTKB|Q3MHP2 - symbol:RAB11B "Ras-related protein Rab... 151 1.5e-09 1
UNIPROTKB|J9JHN1 - symbol:RAB11B "Uncharacterized protein... 151 1.5e-09 1
UNIPROTKB|Q15907 - symbol:RAB11B "Ras-related protein Rab... 151 1.5e-09 1
UNIPROTKB|F2Z5J9 - symbol:RAB11B "Uncharacterized protein... 151 1.5e-09 1
MGI|MGI:99425 - symbol:Rab11b "RAB11B, member RAS oncogen... 151 1.5e-09 1
RGD|68369 - symbol:Rab11b "RAB11B, member RAS oncogene fa... 151 1.5e-09 1
ZFIN|ZDB-GENE-040718-293 - symbol:rab11bb "RAB11B, member... 151 1.5e-09 1
TAIR|locus:2171790 - symbol:RABA4a "RAB GTPase homolog A4... 152 1.7e-09 1
UNIPROTKB|Q6IQ22 - symbol:RAB12 "Ras-related protein Rab-... 154 1.8e-09 1
WB|WBGene00004268 - symbol:rab-5 species:6239 "Caenorhabd... 148 1.8e-09 1
UNIPROTKB|P91857 - symbol:rab-5 "Protein RAB-5" species:6... 148 1.8e-09 1
UNIPROTKB|F1PGI1 - symbol:RAB21 "Ras-related protein Rab-... 153 2.0e-09 1
CGD|CAL0001741 - symbol:orf19.714 species:5476 "Candida a... 150 2.3e-09 1
UNIPROTKB|Q59U18 - symbol:YPT6 "Likely rab family GTP-bin... 150 2.3e-09 1
MGI|MGI:894284 - symbol:Rab12 "RAB12, member RAS oncogene... 153 2.4e-09 1
FB|FBgn0005586 - symbol:Rab3 "Rab3" species:7227 "Drosoph... 150 2.4e-09 1
ZFIN|ZDB-GENE-050320-28 - symbol:rab6bb "RAB6B, member RA... 147 2.7e-09 1
UNIPROTKB|J9P652 - symbol:RAB6A "Uncharacterized protein"... 139 2.8e-09 1
ZFIN|ZDB-GENE-040718-428 - symbol:rab3db "RAB3D, member R... 149 3.6e-09 1
UNIPROTKB|F1NC27 - symbol:RAB21 "Uncharacterized protein"... 150 3.7e-09 1
ASPGD|ASPL0000069770 - symbol:srgC species:162425 "Emeric... 138 3.7e-09 1
POMBASE|SPAC6F6.15 - symbol:ypt5 "GTPase Ypt5" species:48... 147 3.7e-09 1
UNIPROTKB|F1N908 - symbol:RAB35 "Uncharacterized protein"... 144 3.8e-09 1
UNIPROTKB|F1MSJ9 - symbol:RAB35 "Uncharacterized protein"... 144 3.8e-09 1
UNIPROTKB|Q15286 - symbol:RAB35 "Ras-related protein Rab-... 144 3.8e-09 1
UNIPROTKB|F2Z4Z0 - symbol:RAB35 "Uncharacterized protein"... 144 3.8e-09 1
MGI|MGI:1924657 - symbol:Rab35 "RAB35, member RAS oncogen... 144 3.8e-09 1
RGD|1306362 - symbol:Rab35 "RAB35, member RAS oncogene fa... 144 3.8e-09 1
ZFIN|ZDB-GENE-060929-1062 - symbol:zgc:154045 "zgc:154045... 148 3.9e-09 1
ZFIN|ZDB-GENE-040426-2860 - symbol:rab11ba "RAB11B, membe... 148 4.4e-09 1
FB|FBgn0015797 - symbol:Rab6 "Rab6" species:7227 "Drosoph... 146 4.5e-09 1
WB|WBGene00004270 - symbol:rab-6.2 species:6239 "Caenorha... 145 4.7e-09 1
WARNING: Descriptions of 711 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2093019 [details] [associations]
symbol:SGP2 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0090404 "pollen tube tip"
evidence=IDA] [GO:0015824 "proline transport" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR013684 Pfam:PF08477 PRINTS:PR00449
GO:GO:0005525 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0005622 EMBL:AB025634 GO:GO:0090404 KO:K07976
HOGENOM:HOG000216335 OMA:DSQIGKT InterPro:IPR017231
PIRSF:PIRSF037527 EMBL:AJ505743 IPI:IPI00519671 RefSeq:NP_850622.1
UniGene:At.5851 ProteinModelPortal:Q9LSZ4 SMR:Q9LSZ4 PRIDE:Q9LSZ4
EnsemblPlants:AT3G21700.3 GeneID:821724 KEGG:ath:AT3G21700
TAIR:At3g21700 InParanoid:Q9LSZ4 PhylomeDB:Q9LSZ4
ProtClustDB:CLSN2688647 Genevestigator:Q9LSZ4 Uniprot:Q9LSZ4
Length = 292
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 174/281 (61%), Positives = 205/281 (72%)
Query: 5 NLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLPRXXXXXXXXXXLESGLVP--- 61
NL+ R+ R +LILRR W +++ C+ GK RY +L R S +
Sbjct: 13 NLRNRVNRRILILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDV 72
Query: 62 --------GTTVRPSLC-----HSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEK 108
G VR S +SHR D+D LV+LKISLLGD IGKTSFL KYVG+EK
Sbjct: 73 VVGGGGGGGEFVRRSSVVYDNDNSHRRSDSD-LVSLKISLLGDPEIGKTSFLAKYVGEEK 131
Query: 109 E-QGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTS 167
E + +G+N DKTL + GARISYSIWE+ G +++D +PVACKDS+AILFMFDLTS
Sbjct: 132 EVEMRELEKGINCTDKTLYMGGARISYSIWELEGAERSRDQIPVACKDSVAILFMFDLTS 191
Query: 168 RCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLF 227
RCTL SVI WYQQARK NQTAIP+++GTKFD+FIQLPIDLQWTIASQAR YAKALNATLF
Sbjct: 192 RCTLNSVISWYQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQARTYAKALNATLF 251
Query: 228 FSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
FSSA+YNINVNKI KF+TAKLFD+PWT+ERNLTIGEPIIDF
Sbjct: 252 FSSASYNINVNKIFKFVTAKLFDLPWTVERNLTIGEPIIDF 292
>TAIR|locus:2160125 [details] [associations]
symbol:SGP1 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR005225
InterPro:IPR013684 Pfam:PF08477 PRINTS:PR00449 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002688 GO:GO:0007264 GO:GO:0005622
eggNOG:COG1100 EMBL:AB005232 KO:K07976 HOGENOM:HOG000216335
InterPro:IPR017231 PIRSF:PIRSF037527 EMBL:AJ238846 IPI:IPI00529549
RefSeq:NP_200295.1 UniGene:At.487 ProteinModelPortal:Q9SUJ6
SMR:Q9SUJ6 EnsemblPlants:AT5G54840.1 GeneID:835574
KEGG:ath:AT5G54840 TAIR:At5g54840 InParanoid:Q9SUJ6 OMA:GWYSQAR
PhylomeDB:Q9SUJ6 ProtClustDB:CLSN2916467 Genevestigator:Q9SUJ6
Uniprot:Q9SUJ6
Length = 288
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 151/272 (55%), Positives = 190/272 (69%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCS--VGKPIRYRMLPRXXXXXXXXXXLESG 58
+V N K RI V I W K++ CS + KPI YR + + G
Sbjct: 19 IVHVNRKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYRRIVHKISSTAGD--IFDG 76
Query: 59 LVPGTTVRPSLCHSHRHLDADN-LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEG 117
TT P++ +D+ LV+LKISLLGDC GKT+F+ KYVGDE Q G
Sbjct: 77 -DDDTTTEPTVSGRRFGSSSDSDLVSLKISLLGDCQTGKTTFVVKYVGDEN-QSFLEMTG 134
Query: 118 LNMMDKTLLVRGARISYSIWEVTGDAK-AQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
LN+MDKT V+G IS+SIW+V GD K ++DH+P+ACKD++AILFMFDLTSR TL SV
Sbjct: 135 LNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAILFMFDLTSRSTLNSVFG 194
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
WY QARK N+TAIPI+IGTKFDDF++LP +LQWTI +QARAYAK +NA+LFFSSAT+NIN
Sbjct: 195 WYSQARKWNKTAIPILIGTKFDDFVRLPPNLQWTIVTQARAYAKVMNASLFFSSATHNIN 254
Query: 237 VNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
VNKI KFI A+LF++PW ++RNLT+GEPIID+
Sbjct: 255 VNKIFKFILARLFNLPWKIDRNLTLGEPIIDY 286
>POMBASE|SPAC1565.06c [details] [associations]
symbol:spg1 "GTPase Spg1" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005816 "spindle pole
body" evidence=IDA] [GO:0031028 "septation initiation signaling
cascade" evidence=IGI] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
PomBase:SPAC1565.06c GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CU329670
GO:GO:0034613 GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0044732
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0071937
GO:GO:0031028 KO:K07976 EMBL:Y12314 EMBL:AJ001587 PIR:T45541
RefSeq:NP_593285.1 ProteinModelPortal:P87027 IntAct:P87027
STRING:P87027 EnsemblFungi:SPAC1565.06c.1 GeneID:2542761
KEGG:spo:SPAC1565.06c HOGENOM:HOG000216335 OMA:DSQIGKT
OrthoDB:EOG4C5GTN NextBio:20803806 InterPro:IPR017231
PIRSF:PIRSF037527 Uniprot:P87027
Length = 198
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 82/189 (43%), Positives = 127/189 (67%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + YV ++ + G+N M+KT+ +R I++SIW++
Sbjct: 7 NNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDL 66
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TA+PI+IGTK+D
Sbjct: 67 GGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDH 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I QAR YAKA+ A+L F S +++INV KI K + AK+FD+ T+
Sbjct: 127 FMTFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEIK 186
Query: 260 TIGEPIIDF 268
+G+PI+++
Sbjct: 187 NVGDPILEY 195
>ASPGD|ASPL0000066888 [details] [associations]
symbol:spgA species:162425 "Emericella nidulans"
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0031028 "septation initiation
signaling cascade" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 EMBL:BN001304 HOGENOM:HOG000216335 InterPro:IPR017231
PIRSF:PIRSF037527 ProteinModelPortal:C8VD16
EnsemblFungi:CADANIAT00000248 OMA:SDSRAHY Uniprot:C8VD16
Length = 314
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 88/210 (41%), Positives = 133/210 (63%)
Query: 61 PGTTVRPS--LCHSHRH--LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE 116
P T+ RPS L + + N V +K+ ++GD IGKTS + KYV ++
Sbjct: 100 PPTSSRPSSGLSGTQKQPAQTTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTL 159
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
G+N M+KT+ +R I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+
Sbjct: 160 GVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKE 219
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
WY+Q R N+TAIP ++GTK+D F+ P + Q I+ QA+ +AKA+ A+L FSS +++IN
Sbjct: 220 WYRQGRGFNKTAIPFLVGTKYDHFVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSIN 279
Query: 237 VNKILKFITAKLFDIPWTLERNLTIGEPII 266
V KI K + AK FD+ T+ IGEP++
Sbjct: 280 VQKIFKIVLAKAFDLKCTIPEIENIGEPLL 309
>DICTYBASE|DDB_G0291269 [details] [associations]
symbol:spg1 "small GTPase" species:44689
"Dictyostelium discoideum" [GO:0005813 "centrosome" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007096
"regulation of exit from mitosis" evidence=ISS] [GO:0006184 "GTP
catabolic process" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
dictyBase:DDB_G0291269 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005813 GO:GO:0007264 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003924 GO:GO:0007096
eggNOG:COG1100 KO:K07976 OMA:DSQIGKT InterPro:IPR017231
PIRSF:PIRSF037527 RefSeq:XP_635107.1 ProteinModelPortal:Q54EY3
EnsemblProtists:DDB0230030 GeneID:8628054 KEGG:ddi:DDB_G0291269
InParanoid:Q54EY3 ProtClustDB:CLSZ2429534 Uniprot:Q54EY3
Length = 203
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 83/189 (43%), Positives = 126/189 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +RG I++SIW++
Sbjct: 15 NNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFSIWDL 74
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTKFD
Sbjct: 75 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDV 134
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F PI+ Q I QAR +A A+ + L F S +++INV KI K + +K FD+ T+ + +
Sbjct: 135 FATKPIEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTIPKVV 194
Query: 260 TIGEPIIDF 268
+GEP++++
Sbjct: 195 GVGEPLLEY 203
>SGD|S000004529 [details] [associations]
symbol:TEM1 "GTP-binding protein of the Ras family involved
in M-phase termination" species:4932 "Saccharomyces cerevisiae"
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007096 "regulation of exit from mitosis" evidence=TAS]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SGD:S000004529
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0005816
GO:GO:0051301 GO:GO:0007067 GO:GO:0003924 EMBL:BK006946
PROSITE:PS51419 GO:GO:0007096 eggNOG:COG1100 EMBL:Z38114
HOGENOM:HOG000216335 OMA:DSQIGKT OrthoDB:EOG4C5GTN
InterPro:IPR017231 PIRSF:PIRSF037527 EMBL:D38172 EMBL:AY557980
PIR:S48334 RefSeq:NP_013647.1 ProteinModelPortal:P38987 SMR:P38987
DIP:DIP-1691N IntAct:P38987 MINT:MINT-383751 STRING:P38987
PaxDb:P38987 PeptideAtlas:P38987 EnsemblFungi:YML064C GeneID:854938
KEGG:sce:YML064C CYGD:YML064c KO:K06682 NextBio:977983
Genevestigator:P38987 GermOnline:YML064C Uniprot:P38987
Length = 245
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 68/187 (36%), Positives = 111/187 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPII 266
IG+P++
Sbjct: 197 EIGDPLL 203
>UNIPROTKB|Q9UL26 [details] [associations]
symbol:RAB22A "Ras-related protein Rab-22A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007032 "endosome organization" evidence=IEP] [GO:0006897
"endocytosis" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CH471077 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0016023 GO:GO:0010008
GO:GO:0001726 PROSITE:PS51419 GO:GO:0007032 GO:GO:0005769
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AL035455
HOGENOM:HOG000233968 CTD:57403 KO:K07891 OrthoDB:EOG4CRM14
EMBL:AF125104 EMBL:AF091034 EMBL:AJ276210 EMBL:BT007046
EMBL:AK091180 EMBL:BC015710 EMBL:BC063457 IPI:IPI00007756
RefSeq:NP_065724.1 UniGene:Hs.529044 ProteinModelPortal:Q9UL26
SMR:Q9UL26 IntAct:Q9UL26 MINT:MINT-5003659 STRING:Q9UL26
PhosphoSite:Q9UL26 DMDM:13633614 PaxDb:Q9UL26 PRIDE:Q9UL26
DNASU:57403 Ensembl:ENST00000244040 GeneID:57403 KEGG:hsa:57403
UCSC:uc002xyz.3 GeneCards:GC20P056884 HGNC:HGNC:9764 MIM:612966
neXtProt:NX_Q9UL26 PharmGKB:PA34112 InParanoid:Q9UL26 OMA:TDTNPPS
PhylomeDB:Q9UL26 GenomeRNAi:57403 NextBio:63508 ArrayExpress:Q9UL26
Bgee:Q9UL26 CleanEx:HS_RAB22A Genevestigator:Q9UL26
GermOnline:ENSG00000124209 Uniprot:Q9UL26
Length = 194
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 50/180 (27%), Positives = 91/180 (50%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
ID++ + A+ YA +++A +SA IN+N++ I+ + IP T + NL G
Sbjct: 122 -LIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRR---IPST-DANLPSG 176
>UNIPROTKB|F1MHP4 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015629
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 GO:GO:0007032
GO:GO:0005769 GeneTree:ENSGT00640000091139 OMA:TDTNPPS
EMBL:DAAA02036338 IPI:IPI00854462 UniGene:Bt.19047
Ensembl:ENSBTAT00000024031 Uniprot:F1MHP4
Length = 194
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 44/166 (26%), Positives = 85/166 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 -LIDVREVMERDAKDYADSIHAVFVETSAKNAININELFIEISRRI 166
>UNIPROTKB|A5GHL0 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015629
GO:GO:0015031 GO:GO:0003924 GO:GO:0006897 GO:GO:0007032
GO:GO:0005769 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:CT009685
RefSeq:NP_001116646.1 UniGene:Ssc.10486 ProteinModelPortal:A5GHL0
SMR:A5GHL0 Ensembl:ENSSSCT00000008229 GeneID:100144535
KEGG:ssc:100144535 ArrayExpress:A5GHL0 Uniprot:A5GHL0
Length = 194
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 44/166 (26%), Positives = 85/166 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 -LIDVREVLERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>MGI|MGI:105072 [details] [associations]
symbol:Rab22a "RAB22A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006897
"endocytosis" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0045335 "phagocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105072 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0016023 GO:GO:0010008 GO:GO:0001726
PROSITE:PS51419 GO:GO:0007032 GO:GO:0005769 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:AJ311124 EMBL:AK031667
EMBL:AK146594 EMBL:AK150617 EMBL:BC006596 EMBL:M79304
IPI:IPI00116729 PIR:JH0644 RefSeq:NP_077756.2 UniGene:Mm.275304
PDB:1YVD PDB:1Z0J PDBsum:1YVD PDBsum:1Z0J ProteinModelPortal:P35285
SMR:P35285 STRING:P35285 PhosphoSite:P35285 PaxDb:P35285
PRIDE:P35285 Ensembl:ENSMUST00000029024 GeneID:19334 KEGG:mmu:19334
InParanoid:P35285 ChiTaRS:RAB22A EvolutionaryTrace:P35285
NextBio:296319 Bgee:P35285 CleanEx:MM_RAB22A Genevestigator:P35285
GermOnline:ENSMUSG00000027519 Uniprot:P35285
Length = 194
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/166 (25%), Positives = 85/166 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ + P+ + S A + ++D+T T ++ W ++ R+ +I + I G K D
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 -LTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>UNIPROTKB|P51154 [details] [associations]
symbol:RAB22A "Ras-related protein Rab-22A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0001726 "ruffle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0016023 GO:GO:0010008 GO:GO:0005770
GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22820
PIR:S40208 RefSeq:NP_001003208.1 UniGene:Cfa.45045
ProteinModelPortal:P51154 SMR:P51154 GeneID:403864 KEGG:cfa:403864
CTD:57403 InParanoid:P51154 KO:K07891 OrthoDB:EOG4CRM14
NextBio:20817357 Uniprot:P51154
Length = 194
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 44/166 (26%), Positives = 84/166 (50%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 66 AFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 -LIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>SGD|S000001889 [details] [associations]
symbol:SEC4 "Rab family GTPase essential for exocytic
secretion and autophagy" species:4932 "Saccharomyces cerevisiae"
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEP;IGI;IMP] [GO:0006914 "autophagy" evidence=IGI;IMP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;TAS] [GO:0007121 "bipolar cellular bud
site selection" evidence=TAS] [GO:0030478 "actin cap" evidence=TAS]
[GO:0030133 "transport vesicle" evidence=TAS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006906 "vesicle fusion"
evidence=IMP] [GO:0006893 "Golgi to plasma membrane transport"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IEA;IDA]
[GO:0031321 "ascospore-type prospore assembly" evidence=IMP]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000001889
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0005741 GO:GO:0015031 GO:GO:0003924 GO:GO:0006914 EMBL:D50617
EMBL:BK006940 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030133
GO:GO:0030658 eggNOG:COG1100 GO:GO:0006893 GO:GO:0030478
GO:GO:0000131 GO:GO:0006906 GO:GO:0007121 GO:GO:0031321 PDB:3CPH
PDBsum:3CPH GO:GO:0007107 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:AMGIVLI PDB:2EQB PDB:2OCY
PDBsum:2EQB PDBsum:2OCY EMBL:M16507 EMBL:AY692843 PIR:A25959
RefSeq:NP_116650.1 PDB:1G16 PDB:1G17 PDBsum:1G16 PDBsum:1G17
ProteinModelPortal:P07560 SMR:P07560 DIP:DIP-2492N IntAct:P07560
MINT:MINT-689902 STRING:P07560 PaxDb:P07560 PeptideAtlas:P07560
PRIDE:P07560 EnsemblFungi:YFL005W GeneID:850543 KEGG:sce:YFL005W
CYGD:YFL005w OrthoDB:EOG4X3M9K EvolutionaryTrace:P07560
NextBio:966307 Genevestigator:P07560 GermOnline:YFL005W
Uniprot:P07560
Length = 215
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 46/180 (25%), Positives = 87/180 (48%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
++ + A Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>TAIR|locus:2042321 [details] [associations]
symbol:RAB6A species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005794 "Golgi
apparatus" evidence=ISM;IDA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0032940 "secretion by cell" evidence=IGI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0007264
GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0032940
GO:GO:0016192 GO:GO:0015031 GO:GO:0005768 EMBL:AC003672
GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
KO:K07893 OMA:TTKWIED HSSP:P20340 EMBL:BT025780 EMBL:AK226988
EMBL:AY087904 IPI:IPI00530291 PIR:T01588 RefSeq:NP_181989.1
UniGene:At.24965 ProteinModelPortal:O80501 SMR:O80501 STRING:O80501
PaxDb:O80501 PRIDE:O80501 EnsemblPlants:AT2G44610.1 GeneID:819069
KEGG:ath:AT2G44610 TAIR:At2g44610 InParanoid:O80501
PhylomeDB:O80501 ProtClustDB:CLSN2683217 Genevestigator:O80501
Uniprot:O80501
Length = 208
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 39/169 (23%), Positives = 79/169 (46%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR + + +W + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + +A A A+ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>UNIPROTKB|Q5ZLB8 [details] [associations]
symbol:RAB22A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015629 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0007032 GO:GO:0005769 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:57403
KO:K07891 OrthoDB:EOG4CRM14 OMA:TDTNPPS EMBL:AADN02018996
EMBL:AJ719816 IPI:IPI00593951 RefSeq:NP_001026038.1
UniGene:Gga.7554 SMR:Q5ZLB8 Ensembl:ENSGALT00000012215
GeneID:419318 KEGG:gga:419318 InParanoid:Q5ZLB8 NextBio:20822399
Uniprot:Q5ZLB8
Length = 194
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 43/166 (25%), Positives = 85/166 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D +
Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD--LN 123
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 124 ---DVREVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>FB|FBgn0031090 [details] [associations]
symbol:Rab35 "Rab35" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0006911 GO:GO:0005811
GO:GO:0015031 EMBL:AE014298 GO:GO:0000910 HSSP:P07560
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
ChiTaRS:RAB35 FlyBase:FBgn0031090 EMBL:AY094795
RefSeq:NP_001188678.1 RefSeq:NP_608373.1 UniGene:Dm.3622 SMR:Q9W5X0
EnsemblMetazoa:FBtr0070028 EnsemblMetazoa:FBtr0303258
EnsemblMetazoa:FBtr0333549 GeneID:33014 KEGG:dme:Dmel_CG9575
UCSC:CG9575-RA InParanoid:Q9W5X0 GenomeRNAi:33014 NextBio:781524
Uniprot:Q9W5X0
Length = 201
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 41/166 (24%), Positives = 82/166 (49%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++GD +GK+S L ++ D G++ +T+ + G R+ IW+ G +
Sbjct: 10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQER 69
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+ + + ++ ++D+T+ + +V RW ++ + +++G K DD P
Sbjct: 70 FRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDD----P 125
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D + I A+ +AK ++ LF +SA NINV + IT ++ D
Sbjct: 126 -DRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
>UNIPROTKB|I3LMP5 [details] [associations]
symbol:RAB42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101664 KO:K07929 OMA:RFRCITR
EMBL:FP565629 RefSeq:XP_003356293.1 Ensembl:ENSSSCT00000031603
GeneID:100621746 KEGG:ssc:100621746 Uniprot:I3LMP5
Length = 219
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 47/164 (28%), Positives = 83/164 (50%)
Query: 85 KISLLGDCHIGKTSFLEKYVGD-------EKEQGGSPGEGLNMMDKTLLVR-GARISYSI 136
+I+LLGD +GKTS L +YV D E E +P G+ +TL +R G R+ +
Sbjct: 11 RIALLGDTAVGKTSLLRRYVADAPWIPEPEPELESAPTVGVEFYSRTLQLRAGPRVKLQL 70
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ--ARKCNQTAIPIIIG 194
W+ G + + ++ + +L +FD+T+R + + + W+Q+ A + AI +++G
Sbjct: 71 WDTAGQERFRCITRSFYRNVVGVLLVFDVTNRKSFEHIRDWHQEVMATQGPDKAIFLLVG 130
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
K D +Q ++ A +A A +L +SA N NV+
Sbjct: 131 HKSD--LQ---SMRCVSAQEAEELAASLGMAFVETSAKNNCNVD 169
>ZFIN|ZDB-GENE-041114-161 [details] [associations]
symbol:rab22a "RAB22A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041114-161 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
GeneTree:ENSGT00640000091139 OMA:TDTNPPS HSSP:P10114 EMBL:BX323459
EMBL:AY398404 IPI:IPI00486571 UniGene:Dr.143739 SMR:Q6TGV2
STRING:Q6TGV2 Ensembl:ENSDART00000022581 InParanoid:Q6TGV2
Uniprot:Q6TGV2
Length = 196
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 44/170 (25%), Positives = 86/170 (50%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 2 SLRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 61
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFD 198
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 62 AGQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD 121
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L D + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LS-DAREVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>UNIPROTKB|E2R5A5 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 CTD:11031 KO:K07892
OMA:SKQIPPL GeneTree:ENSGT00640000091139 EMBL:AAEX03005508
RefSeq:XP_850610.2 ProteinModelPortal:E2R5A5
Ensembl:ENSCAFT00000029725 GeneID:608485 KEGG:cfa:608485
NextBio:20894132 Uniprot:E2R5A5
Length = 195
Score = 165 (63.1 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 41/168 (24%), Positives = 86/168 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 164 (62.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 44/168 (26%), Positives = 85/168 (50%)
Query: 85 KISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GDC GKT ++++ G+ E+ G+ G++ KT+ V G +I IW+ G
Sbjct: 23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNT-IGVDFSMKTIAVEGKQIKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFIQ 202
+ + + + +L ++D+T R + ++ +W ++ R+ + + II +G K D Q
Sbjct: 82 RFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+D + +AR + + LF +SA N+NV + + +L
Sbjct: 142 REVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANEL 184
>MGI|MGI:1914603 [details] [associations]
symbol:Rab31 "RAB31, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005770 "late endosome"
evidence=ISO] [GO:0005802 "trans-Golgi network" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031623
"receptor internalization" evidence=ISO] [GO:0032588 "trans-Golgi
network membrane" evidence=ISO] [GO:0032869 "cellular response to
insulin stimulus" evidence=ISO] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISO] [GO:0045055 "regulated
secretory pathway" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0048193 "Golgi vesicle transport" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1914603 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0005770
GO:GO:0005802 PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100
GO:GO:0048193 HOVERGEN:HBG009351 CTD:11031 KO:K07892 OMA:SKQIPPL
OrthoDB:EOG48KRC8 EMBL:AK051270 EMBL:BC013063 IPI:IPI00222632
RefSeq:NP_598446.2 UniGene:Mm.29274 ProteinModelPortal:Q921E2
SMR:Q921E2 STRING:Q921E2 PhosphoSite:Q921E2 PaxDb:Q921E2
PRIDE:Q921E2 GeneID:106572 KEGG:mmu:106572 InParanoid:Q921E2
NextBio:358266 Bgee:Q921E2 CleanEx:MM_RAB31 Genevestigator:Q921E2
GermOnline:ENSMUSG00000056515 Uniprot:Q921E2
Length = 194
Score = 164 (62.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 41/168 (24%), Positives = 86/168 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>RGD|628598 [details] [associations]
symbol:Rab31 "RAB31, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005769 "early
endosome" evidence=ISO;ISS;IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031623 "receptor internalization"
evidence=ISO;ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO;ISS] [GO:0032869 "cellular response to insulin
stimulus" evidence=ISO;ISS] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=ISO;ISS] [GO:0045055 "regulated
secretory pathway" evidence=ISO;ISS] [GO:0045335 "phagocytic
vesicle" evidence=ISO;ISS] [GO:0048193 "Golgi vesicle transport"
evidence=IMP] [GO:0090382 "phagosome maturation" evidence=ISO;ISS]
[GO:0005770 "late endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:628598 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0048193 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:11031
KO:K07892 OrthoDB:EOG48KRC8 EMBL:AF254800 EMBL:BC072698
IPI:IPI00454495 RefSeq:NP_659562.2 UniGene:Rn.28921
ProteinModelPortal:Q6GQP4 SMR:Q6GQP4 IntAct:Q6GQP4 STRING:Q6GQP4
PRIDE:Q6GQP4 Ensembl:ENSRNOT00000067974 GeneID:246324
KEGG:rno:246324 GeneTree:ENSGT00640000091139 NextBio:623748
ArrayExpress:Q6GQP4 Genevestigator:Q6GQP4 Uniprot:Q6GQP4
Length = 194
Score = 164 (62.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 41/168 (24%), Positives = 86/168 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
>TAIR|locus:2085084 [details] [associations]
symbol:RABC2b "RAB GTPase homolog C2B" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 EMBL:AC015985 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662 PROSITE:PS00675
KO:K07976 HOGENOM:HOG000233968 HSSP:P07560 EMBL:BT012209
EMBL:BT012396 IPI:IPI00534966 RefSeq:NP_001189850.1
RefSeq:NP_001189851.1 RefSeq:NP_187602.1 UniGene:At.43236
ProteinModelPortal:Q9SF92 SMR:Q9SF92 PaxDb:Q9SF92 PRIDE:Q9SF92
EnsemblPlants:AT3G09910.1 EnsemblPlants:AT3G09910.2
EnsemblPlants:AT3G09910.3 GeneID:820149 KEGG:ath:AT3G09910
TAIR:At3g09910 InParanoid:Q9SF92 OMA:HECSART PhylomeDB:Q9SF92
ProtClustDB:CLSN2915695 Genevestigator:Q9SF92 Uniprot:Q9SF92
Length = 205
Score = 164 (62.8 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/178 (26%), Positives = 83/178 (46%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ E +P G++ K + VRG R+ +IW+ G
Sbjct: 12 LSFKILLIGDSGVGKSSLLLSFISSSVEDL-APTIGVDFKIKQMKVRGKRLKLTIWDTAG 70
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
K + + S I+ ++D+T R T ++ W ++ N I +++G K D
Sbjct: 71 QEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVD 130
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+ + + + A AK LN SA NVN + + K+ ++P LE
Sbjct: 131 RESERKVSRE-----EGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183
>UNIPROTKB|Q13636 [details] [associations]
symbol:RAB31 "Ras-related protein Rab-31" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0045055 "regulated secretory pathway"
evidence=IMP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0031623 "receptor internalization" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0090382
"phagosome maturation" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0032588
GO:GO:0032869 GO:GO:0003924 GO:GO:0005770 PROSITE:PS51419
GO:GO:0005769 GO:GO:0043001 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045055 HOVERGEN:HBG009351 EMBL:AP000902 EMBL:U57091
EMBL:U59877 EMBL:AF234995 EMBL:AF183421 EMBL:AF498957 EMBL:AK314809
EMBL:BT020027 EMBL:BT020028 EMBL:CR407659 EMBL:AC006238
EMBL:BC001148 IPI:IPI00014376 PIR:JC4961 RefSeq:NP_006859.2
UniGene:Hs.99528 PDB:2FG5 PDBsum:2FG5 ProteinModelPortal:Q13636
SMR:Q13636 IntAct:Q13636 MINT:MINT-1404598 STRING:Q13636
PhosphoSite:Q13636 DMDM:2500069 PaxDb:Q13636 PRIDE:Q13636
DNASU:11031 Ensembl:ENST00000306096 Ensembl:ENST00000578921
GeneID:11031 KEGG:hsa:11031 UCSC:uc002kog.2 CTD:11031
GeneCards:GC18P009701 HGNC:HGNC:9771 HPA:HPA019717 MIM:605694
neXtProt:NX_Q13636 PharmGKB:PA34122 InParanoid:Q13636 KO:K07892
OMA:SKQIPPL OrthoDB:EOG48KRC8 PhylomeDB:Q13636 ChiTaRS:RAB31
EvolutionaryTrace:Q13636 GenomeRNAi:11031 NextBio:41922 Bgee:Q13636
CleanEx:HS_RAB31 Genevestigator:Q13636 GermOnline:ENSG00000168461
Uniprot:Q13636
Length = 194
Score = 163 (62.4 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 41/168 (24%), Positives = 86/168 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>DICTYBASE|DDB_G0276007 [details] [associations]
symbol:DDB_G0276007 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0276007 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AAFI02000013
eggNOG:COG1100 RefSeq:XP_001134601.1 ProteinModelPortal:Q1ZXK9
EnsemblProtists:DDB0233191 GeneID:8620262 KEGG:ddi:DDB_G0276007
Uniprot:Q1ZXK9
Length = 212
Score = 162 (62.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 50/178 (28%), Positives = 78/178 (43%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L+ +K L+G GKTS + + V + + P G ++KT I +W+
Sbjct: 19 LIPVKCVLIGPTFSGKTSLVVRLVRETFSKESQPTVGAMFLNKTFQFSTHFIKLEVWDTA 78
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD- 198
G K P+ K S + +FDL+ R + W + + + AI I+IG K D
Sbjct: 79 GQEKFNSLAPMYFKKSKVAIIVFDLSDRQSFVKAKMWNNEFKTHATEPAIMILIGNKCDL 138
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+ L D+ I + +++ T F +SA N NVN I + I K IPW E
Sbjct: 139 NKTVLQSDIDDFIREEKE---NSIDFTYFEASAKENTNVNNIFETIAGK---IPWKEE 190
>UNIPROTKB|E1BTI1 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 OMA:SKQIPPL GeneTree:ENSGT00640000091139
EMBL:AADN02052698 EMBL:AADN02052699 EMBL:AADN02052700
EMBL:AADN02052701 EMBL:AADN02052702 EMBL:AADN02052703
EMBL:AADN02052704 EMBL:AADN02052705 IPI:IPI00592658
Ensembl:ENSGALT00000033559 NextBio:20830561 Uniprot:E1BTI1
Length = 194
Score = 162 (62.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 40/168 (23%), Positives = 86/168 (51%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA +N+ ++ + I+ ++
Sbjct: 126 REVPM-------KDAKEYAESIGAIVVETSAKNAVNIEELFQGISQQI 166
>WB|WBGene00004279 [details] [associations]
symbol:rab-21 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264
GO:GO:0015031 eggNOG:COG1100 EMBL:Z66499 HOGENOM:HOG000233968
HSSP:P20339 KO:K07890 GeneTree:ENSGT00640000091439 PIR:T24268
RefSeq:NP_495854.1 ProteinModelPortal:Q22045 SMR:Q22045
IntAct:Q22045 STRING:Q22045 PaxDb:Q22045 EnsemblMetazoa:T01B7.3.1
EnsemblMetazoa:T01B7.3.2 GeneID:187932 KEGG:cel:CELE_T01B7.3
UCSC:T01B7.3 CTD:187932 WormBase:T01B7.3 InParanoid:Q22045
OMA:GARYLET NextBio:937000 Uniprot:Q22045
Length = 207
Score = 162 (62.1 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 46/167 (27%), Positives = 81/167 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLG+ +GK+S + ++V ++ + +KT+ V + IW+ G K
Sbjct: 14 KIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQEK 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQL 203
P+ + S +L +FD+T R + + V W + + C TA +I+G K D L
Sbjct: 74 YHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKID----L 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ Q T A AYA++ A +SA N+ ++ + +TAK+ +
Sbjct: 130 EEERQVT-RQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIE 175
>TAIR|locus:2140045 [details] [associations]
symbol:RABH1c "RAB GTPase homolog H1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0006984 "ER-nucleus signaling
pathway" evidence=RCA] [GO:0009697 "salicylic acid biosynthetic
process" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0045087
"innate immune response" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0007264 GO:GO:0000139 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P20340 EMBL:AF325109 EMBL:AF386952 EMBL:BT000043
IPI:IPI00539855 PIR:T06095 RefSeq:NP_195699.1 UniGene:At.2863
ProteinModelPortal:Q9SMR4 SMR:Q9SMR4 STRING:Q9SMR4 PaxDb:Q9SMR4
PRIDE:Q9SMR4 EnsemblPlants:AT4G39890.1 GeneID:830148
KEGG:ath:AT4G39890 TAIR:At4g39890 InParanoid:Q9SMR4 OMA:PEGMIDI
PhylomeDB:Q9SMR4 ProtClustDB:CLSN2916092 Genevestigator:Q9SMR4
Uniprot:Q9SMR4
Length = 214
Score = 160 (61.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 41/170 (24%), Positives = 81/170 (47%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + P G++ + KT+ + + +W+
Sbjct: 7 LAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQT-AIPIIIGTKFD 198
G + + +P +DS + ++D+++R T + +W + R+ Q+ I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTD 126
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I S+ K +SA N N+ + + I A L
Sbjct: 127 ----LVEKRQVSI-SEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171
>TAIR|locus:2831859 [details] [associations]
symbol:RABC2A "RAB GTPase homolog C2A" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0030742 "GTP-dependent
protein binding" evidence=IPI] [GO:0080115 "myosin XI tail binding"
evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 EMBL:AL162751 GO:GO:0005777
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662
PROSITE:PS00675 KO:K07976 HOGENOM:HOG000233968 HSSP:P07560
OMA:FAKRHRT EMBL:D89824 EMBL:AK119027 EMBL:BT006101 IPI:IPI00545141
PIR:T48379 RefSeq:NP_568121.1 UniGene:At.346
ProteinModelPortal:O49841 SMR:O49841 IntAct:O49841 STRING:O49841
PaxDb:O49841 PRIDE:O49841 EnsemblPlants:AT5G03530.1 GeneID:831810
KEGG:ath:AT5G03530 TAIR:At5g03530 InParanoid:O49841
PhylomeDB:O49841 ProtClustDB:PLN03118 Genevestigator:O49841
Uniprot:O49841
Length = 210
Score = 157 (60.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 45/178 (25%), Positives = 84/178 (47%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ E +P G++ K L V G R+ +IW+ G
Sbjct: 12 LSFKILLIGDSGVGKSSLLVSFISSSVEDL-APTIGVDFKIKQLTVGGKRLKLTIWDTAG 70
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T +++ W ++ NQ + +++G K D
Sbjct: 71 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVD 130
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+ + + IA AK LN SA NV + + + K+ ++P LE
Sbjct: 131 RESERGVSREEGIA-----LAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183
>UNIPROTKB|F1MBF6 [details] [associations]
symbol:RAB6A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00600000084341 CTD:5870
KO:K07893 OMA:FKWIDEV EMBL:DAAA02041037 EMBL:DAAA02041038
EMBL:DAAA02041039 EMBL:DAAA02041040 EMBL:DAAA02041041
IPI:IPI00826921 RefSeq:NP_001180044.1 UniGene:Bt.51816 PRIDE:F1MBF6
Ensembl:ENSBTAT00000000027 GeneID:616537 KEGG:bta:616537
NextBio:20900173 Uniprot:F1MBF6
Length = 208
Score = 156 (60.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 42/175 (24%), Positives = 82/175 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>UNIPROTKB|J9NYJ8 [details] [associations]
symbol:RAB6A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 OMA:FKWIDEV EMBL:AAEX03012812
EMBL:AAEX03012813 Ensembl:ENSCAFT00000046399 Uniprot:J9NYJ8
Length = 208
Score = 156 (60.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 42/175 (24%), Positives = 82/175 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSNIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>UNIPROTKB|F1SUT0 [details] [associations]
symbol:RAB6A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00600000084341
OMA:FKWIDEV EMBL:CU915417 EMBL:CU638671 Ensembl:ENSSSCT00000016180
Uniprot:F1SUT0
Length = 208
Score = 156 (60.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 42/175 (24%), Positives = 82/175 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>FB|FBgn0086913 [details] [associations]
symbol:Rab26 "Rab26" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0031226 "intrinsic to plasma membrane"
evidence=ISS] [GO:0017157 "regulation of exocytosis" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
EMBL:AE014296 GO:GO:0015031 GO:GO:0031226 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0017157 GeneTree:ENSGT00700000104031 CTD:25837
EMBL:AY061826 RefSeq:NP_649303.2 UniGene:Dm.1033 HSSP:Q9ULW5
ProteinModelPortal:Q9VP48 SMR:Q9VP48 IntAct:Q9VP48 MINT:MINT-315772
PaxDb:Q9VP48 PRIDE:Q9VP48 EnsemblMetazoa:FBtr0112677 GeneID:40359
KEGG:dme:Dmel_CG34410 UCSC:CG34410-RB FlyBase:FBgn0086913
InParanoid:Q9VP48 OMA:THHDDAS OrthoDB:EOG4FFBHX GenomeRNAi:40359
NextBio:818369 Bgee:Q9VP48 Uniprot:Q9VP48
Length = 388
Score = 173 (66.0 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 42/136 (30%), Positives = 72/136 (52%)
Query: 65 VRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG-SPGEGLNMMDK 123
+ P+ ++H+ D+ V K LLGD +GKTSFL KY E G S G+ + +K
Sbjct: 173 MHPAPSNAHQQ-PFDDTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNK 231
Query: 124 TLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK 183
++V G R+ IW+ G + + +D+ A+L ++D+T++ T ++ W + R+
Sbjct: 232 VVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIRE 291
Query: 184 CNQTAIPII-IGTKFD 198
Q + I+ IG K D
Sbjct: 292 YAQEDVVIVLIGNKAD 307
>DICTYBASE|DDB_G0275955 [details] [associations]
symbol:rabH "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0275955 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000013 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P61106 RefSeq:XP_643388.1
ProteinModelPortal:Q86JC8 EnsemblProtists:DDB0229405 GeneID:8620273
KEGG:ddi:DDB_G0275955 OMA:TITILVG Uniprot:Q86JC8
Length = 198
Score = 155 (59.6 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 46/168 (27%), Positives = 86/168 (51%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
DN + LK++++GD ++GK+S L ++ D + G + KT+L+RG I I +
Sbjct: 4 DN-IKLKLTIIGDWNVGKSSLLYRFFNDVFYEQTKLSMGEHFFYKTVLIRGESIDLQITD 62
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKF 197
+G K + + IL ++D++ + T ++ W +A K + I II+ +KF
Sbjct: 63 TSGMEKFRSLNNSFYSNLDGILIVYDISDQETFENTKLWLNEANKLAPKDCIKIIVASKF 122
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
D ++ + ++ ++YA LN F +S+ +INV + FIT
Sbjct: 123 D------LENKVVDSNIVKSYADNLNLKFFETSSKNSINVEET--FIT 162
>ZFIN|ZDB-GENE-060825-25 [details] [associations]
symbol:zgc:153788 "zgc:153788" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060825-25 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N
KO:K07930 OMA:LIGDCGT EMBL:CR855375 EMBL:BC122421 IPI:IPI00786530
RefSeq:NP_001038812.1 UniGene:Dr.49036 SMR:Q0P3V5
Ensembl:ENSDART00000082517 GeneID:751627 KEGG:dre:751627
InParanoid:Q0P3V5 NextBio:20917779 Uniprot:Q0P3V5
Length = 208
Score = 155 (59.6 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 42/147 (28%), Positives = 75/147 (51%)
Query: 76 LDADNLVAL--KISLLGDCHIGKTSFLEKY---VGDEKEQGGSPGEGLNMMDKTLLVRGA 130
LD+D+ L KI L+GD +GKT ++++ + EK QG + G M KTL + G
Sbjct: 4 LDSDDSYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEK-QGNTIGVDFTM--KTLEIHGK 60
Query: 131 RISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAI 189
R+ IW+ G + + + + + +D+T + T SV +W + +K +
Sbjct: 61 RVKLQIWDTAGQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIV 120
Query: 190 PIIIGTKFD--DFIQLPIDLQWTIASQ 214
P++IG K D + ++P++ T+A Q
Sbjct: 121 PLLIGNKCDLSESREVPLEDAQTMAHQ 147
>CGD|CAL0002519 [details] [associations]
symbol:SEC4 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IGI;ISS] [GO:0006906 "vesicle fusion"
evidence=IGI] [GO:0006903 "vesicle targeting" evidence=IGI]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0005934
"cellular bud tip" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] [GO:0006893 "Golgi to plasma
membrane transport" evidence=IMP] [GO:0031521 "spitzenkorper"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0005934 GO:GO:0003924 GO:GO:0009306
GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030658
GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0000131 GO:GO:0006906 GO:GO:0031521 KO:K07901
RefSeq:XP_718237.1 RefSeq:XP_718333.1 ProteinModelPortal:P0CY31
SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032 GeneID:3640119
KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571 Uniprot:P0CY31
Length = 210
Score = 154 (59.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/158 (24%), Positives = 76/158 (48%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V W+Q + N+ A ++G K DD +
Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVN 134
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
+ + Q + A LN +SA N NV+ I
Sbjct: 135 RQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSI 167
>UNIPROTKB|P0CY31 [details] [associations]
symbol:SEC4 "Ras-related protein SEC4" species:237561
"Candida albicans SC5314" [GO:0000131 "incipient cellular bud site"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IGI;ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005934 "cellular
bud tip" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IGI;ISS] [GO:0006887 "exocytosis" evidence=IMP]
[GO:0006893 "Golgi to plasma membrane transport" evidence=IMP]
[GO:0006903 "vesicle targeting" evidence=IGI] [GO:0006906 "vesicle
fusion" evidence=IGI] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0031521 "spitzenkorper" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0005934 GO:GO:0003924
GO:GO:0009306 GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419
GO:GO:0030658 GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0000131 GO:GO:0006906 GO:GO:0031521
KO:K07901 RefSeq:XP_718237.1 RefSeq:XP_718333.1
ProteinModelPortal:P0CY31 SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032
GeneID:3640119 KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571
Uniprot:P0CY31
Length = 210
Score = 154 (59.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/158 (24%), Positives = 76/158 (48%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V W+Q + N+ A ++G K DD +
Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVN 134
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
+ + Q + A LN +SA N NV+ I
Sbjct: 135 RQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSI 167
>TAIR|locus:2123010 [details] [associations]
symbol:ARA7 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005768 "endosome"
evidence=IDA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005886
GO:GO:0005774 GO:GO:0007264 GO:GO:0031901 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0015031 GO:GO:0006897
PROSITE:PS51419 EMBL:AL161551 GO:GO:0005769 eggNOG:COG1100
EMBL:AL021768 KO:K07976 HOGENOM:HOG000233968 OMA:VDLQESN
ProtClustDB:CLSN2685695 EMBL:AB038491 EMBL:AF370309 EMBL:AY052670
EMBL:AY063095 IPI:IPI00520138 PIR:T06157 RefSeq:NP_193699.1
UniGene:At.2030 PDB:2EFC PDB:2EFD PDB:2EFE PDB:2EFH PDBsum:2EFC
PDBsum:2EFD PDBsum:2EFE PDBsum:2EFH ProteinModelPortal:Q9SN68
SMR:Q9SN68 IntAct:Q9SN68 STRING:Q9SN68 PaxDb:Q9SN68 PRIDE:Q9SN68
EnsemblPlants:AT4G19640.1 GeneID:827706 KEGG:ath:AT4G19640
TAIR:At4g19640 InParanoid:Q9SN68 PhylomeDB:Q9SN68
EvolutionaryTrace:Q9SN68 Genevestigator:Q9SN68 Uniprot:Q9SN68
Length = 200
Score = 154 (59.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
+D + A A+ YA+ N F +SA NV +I I +L
Sbjct: 127 LLDARKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIARRL 171
>UNIPROTKB|Q1KME6 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0000042 "protein
targeting to Golgi" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0000042 HOGENOM:HOG000233968 EMBL:DQ470138 IPI:IPI00571478
RefSeq:NP_001038105.1 UniGene:Gga.186 ProteinModelPortal:Q1KME6
SMR:Q1KME6 PRIDE:Q1KME6 GeneID:419063 KEGG:gga:419063 CTD:5870
KO:K07893 NextBio:20822174 Uniprot:Q1KME6
Length = 208
Score = 153 (58.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q +I R AK LN +SA NV ++ + + A L
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>TAIR|locus:2153202 [details] [associations]
symbol:RHA1 "RAB homolog 1" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005774 "vacuolar
membrane" evidence=IMP] [GO:0007034 "vacuolar transport"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0007034 PROSITE:PS51419 eggNOG:COG1100 EMBL:AB019224
KO:K07976 HOGENOM:HOG000233968 EMBL:X59152 EMBL:Z22958
EMBL:AF389298 EMBL:AY097362 IPI:IPI00532371 PIR:S23727
RefSeq:NP_199326.1 UniGene:At.23631 ProteinModelPortal:P31582
SMR:P31582 IntAct:P31582 STRING:P31582 PaxDb:P31582 PRIDE:P31582
EnsemblPlants:AT5G45130.1 GeneID:834549 KEGG:ath:AT5G45130
TAIR:At5g45130 InParanoid:P31582 OMA:QCCGGGN PhylomeDB:P31582
ProtClustDB:CLSN2685695 Genevestigator:P31582 GermOnline:AT5G45130
Uniprot:P31582
Length = 200
Score = 153 (58.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 43/166 (25%), Positives = 78/166 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
+D + A +A YA+ N+ F +SA NV I I +L
Sbjct: 127 LLDARKVSAEEAEIYAQE-NSLFFMETSAKTATNVKDIFYEIAKRL 171
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 153 (58.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 38/170 (22%), Positives = 85/170 (50%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + + G++ +T+ + G R+ I
Sbjct: 6 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQI 63
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+T+ + +V RW Q+ + +++G K
Sbjct: 64 WDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVGNK 123
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
++ + + + S AR YA+++N + F +SA + NV + IT+
Sbjct: 124 CEEN-----ERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITS 168
>ZFIN|ZDB-GENE-040426-2849 [details] [associations]
symbol:rab6a "RAB6A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-2849 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 EMBL:AL845435 IPI:IPI00817706
Ensembl:ENSDART00000129190 ArrayExpress:E9QIN4 Bgee:E9QIN4
Uniprot:E9QIN4
Length = 208
Score = 153 (58.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q +I R AK LN +SA NV ++ + + A L
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>UNIPROTKB|P51152 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0044257 "cellular protein catabolic
process" evidence=ISS] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 GO:GO:0008333 PROSITE:PS51419
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 GO:GO:0044257
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22818 PIR:S40207
UniGene:Cfa.44760 ProteinModelPortal:P51152 SMR:P51152 PRIDE:P51152
InParanoid:P51152 OrthoDB:EOG45757M Uniprot:P51152
Length = 208
Score = 152 (58.6 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 44/178 (24%), Positives = 84/178 (47%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 7 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 67 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLD---- 122
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
D + T Q +A + F +SA N NV++I LK + L +P + RN
Sbjct: 123 CETDREIT-RQQGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 179
>ASPGD|ASPL0000015781 [details] [associations]
symbol:srgH species:162425 "Emericella nidulans"
[GO:0005769 "early endosome" evidence=IDA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IMP] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0044088 "regulation of vacuole organization"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0031338 "regulation of vesicle fusion"
evidence=IEA] [GO:0070314 "G1 to G0 transition" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001302 eggNOG:COG1100 EMBL:AACD01000062 KO:K07976
HOGENOM:HOG000233968 OMA:PTSRTCC OrthoDB:EOG4S1XHJ
RefSeq:XP_661446.1 ProteinModelPortal:Q5B6I8 SMR:Q5B6I8
EnsemblFungi:CADANIAT00004864 GeneID:2873265 KEGG:ani:AN3842.2
Uniprot:Q5B6I8
Length = 218
Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/186 (23%), Positives = 87/186 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGDA 143
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 19 KLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQE 78
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQ 202
+ + P+ +++ + ++D+T +L W ++ R+ N+ + + G K D +
Sbjct: 79 RYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVTE 138
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL-TI 261
P D + + A AYA+ F +SA + NV ++ I KL + RN+ T
Sbjct: 139 NP-DKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL-PLDQAGPRNMRTA 196
Query: 262 GEPIID 267
P +D
Sbjct: 197 PRPGVD 202
>DICTYBASE|DDB_G0291233 [details] [associations]
symbol:rabA "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0291233 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:L21011 RefSeq:XP_635210.2
ProteinModelPortal:P34141 PRIDE:P34141 EnsemblProtists:DDB0201658
GeneID:8628156 KEGG:ddi:DDB_G0291233 OMA:QAINIED
ProtClustDB:CLSZ2431057 Uniprot:P34141
Length = 201
Score = 149 (57.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K +GD +GK+S L ++ D + G++ KT+ + G I IW+ G +
Sbjct: 10 KFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQER 69
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQL 203
+ H + A++ ++D+T + + ++V +W Q+ R I +IIG K D Q
Sbjct: 70 FRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQK 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
+D A+ +A +L+ T +SA IN+
Sbjct: 130 VVD-----PFLAQEFADSLDITFKETSAKQAINI 158
>GENEDB_PFALCIPARUM|PF11_0461 [details] [associations]
symbol:Rab6 "PfRab6, GTPase" species:5833
"Plasmodium falciparum" [GO:0005794 "Golgi apparatus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
EMBL:AE014186 KO:K07976 HOGENOM:HOG000233968 OMA:TTKWIED
GenomeReviews:AE014186_GR RefSeq:XP_001348128.2
ProteinModelPortal:Q8IHR8 PRIDE:Q8IHR8
EnsemblProtists:PF11_0461:mRNA GeneID:811004 KEGG:pfa:PF11_0461
EuPathDB:PlasmoDB:PF3D7_1144900 ProtClustDB:PTZ00099 Uniprot:Q8IHR8
Length = 207
Score = 151 (58.2 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 39/165 (23%), Positives = 78/165 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KTL + + +W+ G +
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+R + ++ +W Q + + I ++G K D L
Sbjct: 73 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTD----L 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
DL+ + A+ N +SA N+ + K I +KL
Sbjct: 129 G-DLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKL 172
>UNIPROTKB|Q8IHR8 [details] [associations]
symbol:Rab6 "PfRab6, GTPase" species:36329 "Plasmodium
falciparum 3D7" [GO:0005794 "Golgi apparatus" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
EMBL:AE014186 KO:K07976 HOGENOM:HOG000233968 OMA:TTKWIED
GenomeReviews:AE014186_GR RefSeq:XP_001348128.2
ProteinModelPortal:Q8IHR8 PRIDE:Q8IHR8
EnsemblProtists:PF11_0461:mRNA GeneID:811004 KEGG:pfa:PF11_0461
EuPathDB:PlasmoDB:PF3D7_1144900 ProtClustDB:PTZ00099 Uniprot:Q8IHR8
Length = 207
Score = 151 (58.2 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 39/165 (23%), Positives = 78/165 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KTL + + +W+ G +
Sbjct: 13 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+R + ++ +W Q + + I ++G K D L
Sbjct: 73 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTD----L 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
DL+ + A+ N +SA N+ + K I +KL
Sbjct: 129 G-DLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIASKL 172
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 148 (57.2 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 38/169 (22%), Positives = 82/169 (48%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G ++ I
Sbjct: 4 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+TS + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD ++ + A+ +A+ + +LF +SA N+NV ++ IT
Sbjct: 122 NDDPNSKVVE-----TNDAQKFAEQMGISLFETSAKENVNVEEMFNCIT 165
>UNIPROTKB|P20340 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000042 "protein targeting to Golgi" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0018125 "peptidyl-cysteine methylation" evidence=IDA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0034067 "protein localization to Golgi apparatus"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0072385 "minus-end-directed organelle transport along
microtubule" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005794
GO:GO:0007264 GO:GO:0000139 GO:GO:0016020 GO:GO:0003924
GO:GO:0031410 GO:GO:0005802 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0006890 GO:GO:0072385 HOVERGEN:HBG009351 EMBL:AP002770
PDB:3CWZ PDBsum:3CWZ GO:GO:0000042 PDB:3BBP PDBsum:3BBP
GO:GO:0018125 HOGENOM:HOG000233968 CTD:5870 KO:K07893 EMBL:M28212
EMBL:AF130986 EMBL:AF119836 EMBL:AF198616 EMBL:AF130122
EMBL:DQ437503 EMBL:AK057157 EMBL:AK289748 EMBL:AK290132
EMBL:AF498939 EMBL:AF498941 EMBL:BT019698 EMBL:AP002993
EMBL:BC003617 EMBL:BC068486 EMBL:BC096818 IPI:IPI00023526
IPI:IPI00217943 PIR:G34323 RefSeq:NP_001230647.1 RefSeq:NP_002860.2
RefSeq:NP_942599.1 UniGene:Hs.503222 UniGene:Hs.591552 PDB:1YZQ
PDB:2GIL PDB:4DKX PDBsum:1YZQ PDBsum:2GIL PDBsum:4DKX
ProteinModelPortal:P20340 SMR:P20340 DIP:DIP-39668N IntAct:P20340
MINT:MINT-1482056 STRING:P20340 PhosphoSite:P20340 DMDM:131796
PaxDb:P20340 PRIDE:P20340 DNASU:5870 Ensembl:ENST00000310653
Ensembl:ENST00000336083 Ensembl:ENST00000393571
Ensembl:ENST00000541588 GeneID:5870 KEGG:hsa:5870 UCSC:uc001oue.3
UCSC:uc001ouf.3 GeneCards:GC11M073386 HGNC:HGNC:9786 HPA:CAB009936
MIM:179513 neXtProt:NX_P20340 PharmGKB:PA34146 InParanoid:P20340
OMA:FKWIDEV PhylomeDB:P20340 ChiTaRS:RAB6A EvolutionaryTrace:P20340
GenomeRNAi:5870 NextBio:22798 ArrayExpress:P20340 Bgee:P20340
CleanEx:HS_RAB6A Genevestigator:P20340 GermOnline:ENSG00000175582
Uniprot:P20340
Length = 208
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 40/175 (22%), Positives = 81/175 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>UNIPROTKB|Q5RAV6 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9601
"Pongo abelii" [GO:0000042 "protein targeting to Golgi"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 PROSITE:PS51419 HOVERGEN:HBG009351
GO:GO:0000042 GeneTree:ENSGT00600000084341 CTD:5870 KO:K07893
EMBL:CR858905 RefSeq:NP_001125644.1 UniGene:Pab.18207
ProteinModelPortal:Q5RAV6 SMR:Q5RAV6 PRIDE:Q5RAV6
Ensembl:ENSPPYT00000004357 GeneID:100172563 KEGG:pon:100172563
InParanoid:Q5RAV6 Uniprot:Q5RAV6
Length = 208
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 40/175 (22%), Positives = 81/175 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>MGI|MGI:894313 [details] [associations]
symbol:Rab6a "RAB6A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000042 "protein targeting to
Golgi" evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO;IDA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=ISO] [GO:0032781 "positive regulation of ATPase
activity" evidence=ISO] [GO:0034067 "protein localization to Golgi
apparatus" evidence=ISO] [GO:0051117 "ATPase binding" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:894313
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0000139 GO:GO:0003924 PROSITE:PS51419 GO:GO:0001671
eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0000042 GO:GO:0018125
HOGENOM:HOG000233968 CTD:5870 KO:K07893 OMA:FKWIDEV EMBL:AB041575
EMBL:AK051246 EMBL:AK083262 EMBL:AK084131 EMBL:AK160134
EMBL:AK160866 EMBL:AK169842 EMBL:BC019118 EMBL:BC026915 EMBL:M79313
IPI:IPI00116697 IPI:IPI00230011 PIR:A38883 RefSeq:NP_001157135.1
RefSeq:NP_077249.1 UniGene:Mm.28650 UniGene:Mm.474075
ProteinModelPortal:P35279 SMR:P35279 DIP:DIP-120N IntAct:P35279
STRING:P35279 PhosphoSite:P35279 PaxDb:P35279 PRIDE:P35279
Ensembl:ENSMUST00000032946 Ensembl:ENSMUST00000098252 GeneID:19346
KEGG:mmu:19346 OrthoDB:EOG4NP74D NextBio:296365 Bgee:P35279
CleanEx:MM_RAB6 Genevestigator:P35279 GermOnline:ENSMUSG00000030704
Uniprot:P35279
Length = 208
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 40/175 (22%), Positives = 81/175 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>RGD|619737 [details] [associations]
symbol:Rab6a "RAB6A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000042 "protein targeting to Golgi"
evidence=ISO;ISS] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=IMP;IDA]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;TAS] [GO:0005525
"GTP binding" evidence=IEA;ISO;ISS;IDA] [GO:0005794 "Golgi
apparatus" evidence=ISO;ISS;IDA] [GO:0005802 "trans-Golgi network"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006184 "GTP
catabolic process" evidence=ISO;ISS;TAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0018125 "peptidyl-cysteine methylation" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=ISO] [GO:0032482 "Rab
protein signal transduction" evidence=IC] [GO:0032781 "positive
regulation of ATPase activity" evidence=IDA] [GO:0034067 "protein
localization to Golgi apparatus" evidence=ISO] [GO:0048193 "Golgi
vesicle transport" evidence=TAS] [GO:0051117 "ATPase binding"
evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619737 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0000139 GO:GO:0016020 GO:GO:0003924 PROSITE:PS51419
GO:GO:0001671 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0000042
HOGENOM:HOG000233968 GO:GO:0032482 GeneTree:ENSGT00600000084341
OMA:FKWIDEV EMBL:AC145474 EMBL:AF148210 IPI:IPI00554034
UniGene:Rn.1695 ProteinModelPortal:Q9WVB1 SMR:Q9WVB1 IntAct:Q9WVB1
STRING:Q9WVB1 PhosphoSite:Q9WVB1 PRIDE:Q9WVB1
Ensembl:ENSRNOT00000025104 UCSC:RGD:619737 ArrayExpress:Q9WVB1
Genevestigator:Q9WVB1 GermOnline:ENSRNOG00000018176 Uniprot:Q9WVB1
Length = 208
Score = 151 (58.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 40/175 (22%), Positives = 81/175 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>SGD|S000004252 [details] [associations]
symbol:YPT6 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006886 "intracellular protein transport"
evidence=IGI;TAS] [GO:0016020 "membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=TAS] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IMP;TAS] [GO:0003924 "GTPase activity"
evidence=ISS;IDA;TAS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
SGD:S000004252 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
EMBL:BK006945 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0042147
EMBL:U17244 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 OMA:FKWIDEV OrthoDB:EOG44BFBD
EMBL:X59598 EMBL:AY557936 PIR:S51399 RefSeq:NP_013363.1
ProteinModelPortal:Q99260 SMR:Q99260 DIP:DIP-5577N IntAct:Q99260
MINT:MINT-491690 STRING:Q99260 PaxDb:Q99260 PRIDE:Q99260
EnsemblFungi:YLR262C GeneID:850966 KEGG:sce:YLR262C CYGD:YLR262c
NextBio:967454 Genevestigator:Q99260 GermOnline:YLR262C
Uniprot:Q99260
Length = 215
Score = 153 (58.9 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 41/172 (23%), Positives = 81/172 (47%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L KI LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDT 66
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPIIIGTKF 197
G + + +P +DS + ++D+T R + + + +W + + + ++ I I+G K
Sbjct: 67 AGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKS 126
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATY-NINVNKILKFITAKL 248
D L + Q + + AK L A +F ++T NV + K I L
Sbjct: 127 D----LSDERQIS-TEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL 173
>ZFIN|ZDB-GENE-070620-7 [details] [associations]
symbol:zgc:165464 "zgc:165464" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070620-7 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
KO:K07925 OMA:TKSDRRC EMBL:CT025910 EMBL:BC142804 IPI:IPI00485605
RefSeq:NP_001092211.1 UniGene:Dr.111079 Ensembl:ENSDART00000019199
GeneID:562596 KEGG:dre:562596 NextBio:20884483 Uniprot:A5PLA1
Length = 213
Score = 152 (58.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 43/180 (23%), Positives = 86/180 (47%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ--TAIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++AR Q + + I+
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFIL 120
Query: 193 IGTKFDDFIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D ++ Q ++ Q A A A +SA INV K +T +F++
Sbjct: 121 VGHKCD------LEQQRQVSQQEAEKLAAAYGMRYVETSARDAINVEKAFTELTRDIFEL 174
>UNIPROTKB|H3BTC6 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264
GO:GO:0015031 GO:GO:0019003 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285
EMBL:Z98881 Ensembl:ENST00000568586 Bgee:H3BTC6 Uniprot:H3BTC6
Length = 188
Score = 145 (56.1 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>DICTYBASE|DDB_G0268068 [details] [associations]
symbol:rab6 "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0268068
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GenomeReviews:CM000150_GR GO:GO:0015031 EMBL:AAFI02000003
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 OMA:TTKWIED
RefSeq:XP_647531.1 HSSP:P20340 ProteinModelPortal:Q55FK2 SMR:Q55FK2
PRIDE:Q55FK2 EnsemblProtists:DDB0229392 GeneID:8616338
KEGG:ddi:DDB_G0268068 Uniprot:Q55FK2
Length = 208
Score = 150 (57.9 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 36/171 (21%), Positives = 81/171 (47%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
++L K+ LGD +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 2 ESLSKYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLWD 61
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKF 197
G + + +P +DS + ++D+T++ + + I+W + R + + +++G K
Sbjct: 62 TAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVIMLVGNKT 121
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D L Q +I + A AK + +SA N+ + + + + L
Sbjct: 122 D----LADKRQVSI-EEGEAKAKEYDIMFTETSAKAGFNIKALFRKVASAL 167
>TAIR|locus:2079631 [details] [associations]
symbol:RABA5b "RAB GTPase homolog A5B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC009853 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:AY072444 EMBL:BT002173
IPI:IPI00541946 RefSeq:NP_187397.1 UniGene:At.43319
UniGene:At.48630 ProteinModelPortal:Q9SRS5 SMR:Q9SRS5 IntAct:Q9SRS5
PaxDb:Q9SRS5 PRIDE:Q9SRS5 EnsemblPlants:AT3G07410.1 GeneID:819929
KEGG:ath:AT3G07410 TAIR:At3g07410 InParanoid:Q9SRS5 OMA:EEGLFFM
PhylomeDB:Q9SRS5 ProtClustDB:CLSN2683060 Genevestigator:Q9SRS5
Uniprot:Q9SRS5
Length = 217
Score = 153 (58.9 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 40/169 (23%), Positives = 80/169 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+GD +GK++ L ++ DE + G+ + + + G + IW+ G +
Sbjct: 14 KIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + + L ++D+T T +SV RW Q+ C+ +++G K D ++
Sbjct: 74 FRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCD--LE- 130
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKLFD 250
D++ + +A A+ LFF +SA NV+K + + ++F+
Sbjct: 131 --DIRAVSVEEGKALAE--EEGLFFMETSALDATNVDKAFEIVIREIFN 175
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 144 (55.7 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 37/161 (22%), Positives = 77/161 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
L+ +ARA+A+ N + +SA + NV + K I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 168
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 152 (58.6 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 41/179 (22%), Positives = 84/179 (46%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R D + K+ L+GD +GK++ L ++ +E G+ +TL V G +
Sbjct: 3 RRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPII 192
IW+ G + + + ++ L ++D+T T ++V RW ++ R + + ++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIML 122
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
IG K D ++ L+ A++YA+ + +SA +NV K + I ++++ I
Sbjct: 123 IGNKTD--LK---HLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRI 176
>TAIR|locus:2168469 [details] [associations]
symbol:RABA2D "RAB GTPase homolog A2D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0009504 EMBL:AB016890 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:PLN03110 EMBL:AF370127 EMBL:AY040051
IPI:IPI00533551 RefSeq:NP_200723.1 UniGene:At.24606
ProteinModelPortal:Q9FIF9 SMR:Q9FIF9 PaxDb:Q9FIF9 PRIDE:Q9FIF9
EnsemblPlants:AT5G59150.1 GeneID:836033 KEGG:ath:AT5G59150
TAIR:At5g59150 InParanoid:Q9FIF9 OMA:VEQDYDY PhylomeDB:Q9FIF9
Genevestigator:Q9FIF9 Uniprot:Q9FIF9
Length = 217
Score = 152 (58.6 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
+HR ++ D KI L+GD +GKT+ L ++ +E G+ +TL V G
Sbjct: 2 AHR-VEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
+ IW+ G + + + ++ L ++D+T R T +V+RW ++ R + I I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 192 II-GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++ G K D + L+ + A+ + +SA NV K + + A+++
Sbjct: 121 MMAGNKAD--LN---HLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYH 175
Query: 251 I 251
I
Sbjct: 176 I 176
>UNIPROTKB|P55745 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4W0XF0
ProteinModelPortal:P55745 SMR:P55745 PRIDE:P55745 Uniprot:P55745
Length = 223
Score = 153 (58.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 41/181 (22%), Positives = 86/181 (47%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 12 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 71
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 72 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 131
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 132 IDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 186
Query: 257 R 257
R
Sbjct: 187 R 187
>UNIPROTKB|Q9UL25 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0006184 "GTP catabolic process" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901 GO:GO:0000139
GO:GO:0005789 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 GO:GO:0032154 eggNOG:COG1100
GO:GO:0019003 BRENDA:3.6.5.2 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0
EMBL:AF091035 EMBL:BC021901 EMBL:BC092475 EMBL:D42087
IPI:IPI00007755 RefSeq:NP_055814.1 UniGene:Hs.524590 PDB:1YZT
PDB:1YZU PDB:1Z08 PDB:1Z0I PDB:2OT3 PDBsum:1YZT PDBsum:1YZU
PDBsum:1Z08 PDBsum:1Z0I PDBsum:2OT3 ProteinModelPortal:Q9UL25
SMR:Q9UL25 DIP:DIP-29349N IntAct:Q9UL25 MINT:MINT-3081967
STRING:Q9UL25 PhosphoSite:Q9UL25 DMDM:13633613 PaxDb:Q9UL25
PeptideAtlas:Q9UL25 PRIDE:Q9UL25 DNASU:23011
Ensembl:ENST00000261263 GeneID:23011 KEGG:hsa:23011 UCSC:uc001swt.3
GeneCards:GC12P072100 HGNC:HGNC:18263 HPA:HPA016988 MIM:612398
neXtProt:NX_Q9UL25 PharmGKB:PA34111 InParanoid:Q9UL25 OMA:SHFFASA
PhylomeDB:Q9UL25 ChiTaRS:RAB21 EvolutionaryTrace:Q9UL25
GenomeRNAi:23011 NextBio:43928 ArrayExpress:Q9UL25 Bgee:Q9UL25
CleanEx:HS_RAB21 Genevestigator:Q9UL25 GermOnline:ENSG00000080371
Uniprot:Q9UL25
Length = 225
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/181 (22%), Positives = 86/181 (47%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 14 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 73
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 74 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 133
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 134 IDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 188
Query: 257 R 257
R
Sbjct: 189 R 189
>UNIPROTKB|F1N8I9 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 IPI:IPI00571478 OMA:TTKWIED
EMBL:AADN02055116 EMBL:AADN02055117 EMBL:AADN02055118
EMBL:AADN02055119 EMBL:AADN02055120 Ensembl:ENSGALT00000031276
Uniprot:F1N8I9
Length = 175
Score = 142 (55.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 37/163 (22%), Positives = 74/163 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
Q +I R AK LN +SA NV ++ + A
Sbjct: 131 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQVSNALAA 172
>UNIPROTKB|G3MZN2 [details] [associations]
symbol:RAB31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 OMA:SKQIPPL GeneTree:ENSGT00640000091139
EMBL:DAAA02056827 Ensembl:ENSBTAT00000066041 Uniprot:G3MZN2
Length = 194
Score = 142 (55.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 37/164 (22%), Positives = 81/164 (49%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
L D +GK+S + ++V D + SP G + M KT+ + IW+ G +
Sbjct: 10 LFPDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHS 69
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DFIQLP 204
P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D ++P
Sbjct: 70 LAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVP 129
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 130 L-------KDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 166
>UNIPROTKB|Q17R06 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0031901
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0003924
GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC118088
IPI:IPI00697565 RefSeq:NP_001068785.1 UniGene:Bt.34284
ProteinModelPortal:Q17R06 SMR:Q17R06 PRIDE:Q17R06 GeneID:507488
KEGG:bta:507488 CTD:23011 InParanoid:Q17R06 KO:K07890
OrthoDB:EOG4W0XF0 NextBio:20868087 Uniprot:Q17R06
Length = 222
Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/181 (22%), Positives = 86/181 (47%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 11 AGRTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 70
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 71 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 130
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 131 VDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 185
Query: 257 R 257
R
Sbjct: 186 R 186
>UNIPROTKB|F1SH25 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 KO:K07890 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:CU457452 RefSeq:XP_003481707.1
Ensembl:ENSSSCT00000000550 GeneID:100736618 KEGG:ssc:100736618
Uniprot:F1SH25
Length = 222
Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/176 (22%), Positives = 85/176 (48%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 186
>MGI|MGI:894308 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005768 "endosome" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:894308 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0031901 GO:GO:0000139 GO:GO:0005789
GO:GO:0015031 GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 CTD:23011 KO:K07890
OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC055042 EMBL:M79302
IPI:IPI00337980 PIR:A38879 RefSeq:NP_077774.1 UniGene:Mm.21936
ProteinModelPortal:P35282 SMR:P35282 IntAct:P35282 STRING:P35282
PhosphoSite:P35282 PaxDb:P35282 PRIDE:P35282
Ensembl:ENSMUST00000020343 GeneID:216344 KEGG:mmu:216344
InParanoid:P35282 NextBio:375111 Bgee:P35282 CleanEx:MM_RAB21
Genevestigator:P35282 GermOnline:ENSMUSG00000020132 Uniprot:P35282
Length = 222
Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/181 (22%), Positives = 86/181 (47%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 12 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 71
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 72 DTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 131
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 132 IDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 186
Query: 257 R 257
R
Sbjct: 187 R 187
>RGD|1303150 [details] [associations]
symbol:Rab21 "RAB21, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO;ISS] [GO:0005525 "GTP
binding" evidence=ISO;ISS] [GO:0005768 "endosome" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030659 "cytoplasmic vesicle
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1303150 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0031901 GO:GO:0000139 GO:GO:0005789 GO:GO:0015031
GO:GO:0003924 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HSSP:Q9UL25 HOGENOM:HOG000233968
CTD:23011 KO:K07890 OrthoDB:EOG4W0XF0 OMA:SHFFASA EMBL:BC079323
IPI:IPI00366221 RefSeq:NP_001004238.1 UniGene:Rn.162952
ProteinModelPortal:Q6AXT5 SMR:Q6AXT5 PhosphoSite:Q6AXT5
PRIDE:Q6AXT5 Ensembl:ENSRNOT00000005258 GeneID:299799
KEGG:rno:299799 UCSC:RGD:1303150 GeneTree:ENSGT00640000091439
InParanoid:Q6AXT5 NextBio:645786 Genevestigator:Q6AXT5
Uniprot:Q6AXT5
Length = 223
Score = 152 (58.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/181 (22%), Positives = 86/181 (47%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 12 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 71
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 72 DTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 131
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 132 IDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 186
Query: 257 R 257
R
Sbjct: 187 R 187
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>TAIR|locus:2171790 [details] [associations]
symbol:RABA4a "RAB GTPase homolog A4A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB013395
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 EMBL:AY045947 EMBL:AY079309 EMBL:AY087004
IPI:IPI00520272 RefSeq:NP_201330.1 UniGene:At.9298
ProteinModelPortal:Q9FJN8 SMR:Q9FJN8 STRING:Q9FJN8 PaxDb:Q9FJN8
PRIDE:Q9FJN8 EnsemblPlants:AT5G65270.1 GeneID:836652
KEGG:ath:AT5G65270 TAIR:At5g65270 InParanoid:Q9FJN8 OMA:HGAKGAM
PhylomeDB:Q9FJN8 ProtClustDB:CLSN2685897 Genevestigator:Q9FJN8
Uniprot:Q9FJN8
Length = 226
Score = 152 (58.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK+ L +Y DE G+ +TL++ + IW+ G +
Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ + ++D+T R T + RW ++ R ++ + I+IG K D Q
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQR 138
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNI-NVNKILKFITAKLFDI 251
I + A+ +A+ F ++ +N NV + ++F+I
Sbjct: 139 AIPTE-----DAKEFAEK-EGLFFLETSAFNATNVESAFSTVLTEIFNI 181
>UNIPROTKB|Q6IQ22 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005765 "lysosomal membrane"
evidence=IEA] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0044257 "cellular protein catabolic process"
evidence=ISS] [GO:0005764 "lysosome" evidence=ISS] [GO:0055038
"recycling endosome membrane" evidence=ISS] [GO:0019003 "GDP
binding" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 EMBL:CH471113 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG45757M EMBL:AP001793 EMBL:BC050338 EMBL:BC071600
EMBL:BC098407 IPI:IPI00419932 RefSeq:NP_001020471.2
UniGene:Hs.270074 PDB:2IL1 PDBsum:2IL1 ProteinModelPortal:Q6IQ22
SMR:Q6IQ22 STRING:Q6IQ22 PhosphoSite:Q6IQ22 DMDM:122064944
PaxDb:Q6IQ22 PRIDE:Q6IQ22 DNASU:201475 Ensembl:ENST00000329286
GeneID:201475 KEGG:hsa:201475 UCSC:uc002knp.3 CTD:201475
GeneCards:GC18P008600 HGNC:HGNC:31332 HPA:HPA040727
neXtProt:NX_Q6IQ22 PharmGKB:PA142671102 InParanoid:Q6IQ22 KO:K07907
OMA:CEVDREI ChiTaRS:RAB12 EvolutionaryTrace:Q6IQ22
GenomeRNAi:201475 NextBio:90147 Bgee:Q6IQ22 CleanEx:HS_RAB12
Genevestigator:Q6IQ22 Uniprot:Q6IQ22
Length = 244
Score = 154 (59.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/178 (24%), Positives = 85/178 (47%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 103 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLD---- 158
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
D + T Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 159 CETDREIT-RQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 215
>WB|WBGene00004268 [details] [associations]
symbol:rab-5 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0007028 "cytoplasm organization"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0008219 "cell
death" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0006952
"defense response" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008105
"asymmetric protein localization" evidence=IMP] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005769 "early endosome" evidence=IDA] [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0090386 "phagosome maturation involved
in apoptotic cell clearance" evidence=IMP] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0045335 GO:GO:0006952
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0000003
GO:GO:0009306 GO:GO:0000910 GO:GO:0030163 GO:GO:0008105
GO:GO:0005769 eggNOG:COG1100 GO:GO:0090386 GO:GO:0007028 KO:K07976
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
EMBL:Z81516 PIR:T21442 RefSeq:NP_492481.1 ProteinModelPortal:P91857
SMR:P91857 IntAct:P91857 STRING:P91857 PaxDb:P91857
EnsemblMetazoa:F26H9.6.1 EnsemblMetazoa:F26H9.6.2 GeneID:172755
KEGG:cel:CELE_F26H9.6 UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6
InParanoid:P91857 OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 148 (57.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/166 (24%), Positives = 83/166 (50%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLG+ +GK+S + ++V + + G + +T+ + A I + IW+ G +
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + ++D+T++ + + W ++ R+ + + + G K D +
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKR 140
Query: 204 PIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
++ + +A AYA+ NA LF +SA ++NVN I I KL
Sbjct: 141 TVEYE-----EANAYAED-NALLFMETSAKTSMNVNDIFMAIAKKL 180
>UNIPROTKB|P91857 [details] [associations]
symbol:rab-5 "Protein RAB-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005938 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0006915 GO:GO:0007264
GO:GO:0045335 GO:GO:0006952 GO:GO:0002119 GO:GO:0018996
GO:GO:0003924 GO:GO:0000003 GO:GO:0009306 GO:GO:0000910
GO:GO:0030163 GO:GO:0008105 GO:GO:0005769 eggNOG:COG1100
GO:GO:0090386 GO:GO:0007028 KO:K07976 HOGENOM:HOG000233968
HSSP:P35278 GeneTree:ENSGT00640000091139 EMBL:Z81516 PIR:T21442
RefSeq:NP_492481.1 ProteinModelPortal:P91857 SMR:P91857
IntAct:P91857 STRING:P91857 PaxDb:P91857 EnsemblMetazoa:F26H9.6.1
EnsemblMetazoa:F26H9.6.2 GeneID:172755 KEGG:cel:CELE_F26H9.6
UCSC:F26H9.6.1 CTD:172755 WormBase:F26H9.6 InParanoid:P91857
OMA:RAVDFQV NextBio:876883 Uniprot:P91857
Length = 208
Score = 148 (57.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/166 (24%), Positives = 83/166 (50%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLG+ +GK+S + ++V + + G + +T+ + A I + IW+ G +
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + ++D+T++ + + W ++ R+ + + + G K D +
Sbjct: 81 YHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKR 140
Query: 204 PIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
++ + +A AYA+ NA LF +SA ++NVN I I KL
Sbjct: 141 TVEYE-----EANAYAED-NALLFMETSAKTSMNVNDIFMAIAKKL 180
>UNIPROTKB|F1PGI1 [details] [associations]
symbol:RAB21 "Ras-related protein Rab-21" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00640000091439
EMBL:AAEX03007069 Ensembl:ENSCAFT00000000732 Uniprot:F1PGI1
Length = 238
Score = 153 (58.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 41/181 (22%), Positives = 86/181 (47%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 27 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 86
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 87 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 146
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 147 IDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 201
Query: 257 R 257
R
Sbjct: 202 R 202
>CGD|CAL0001741 [details] [associations]
symbol:orf19.714 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0001741 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 eggNOG:COG1100 EMBL:AACQ01000135 KO:K07976
RefSeq:XP_713074.1 ProteinModelPortal:Q59U18 SMR:Q59U18
GeneID:3645263 KEGG:cal:CaO19.714 Uniprot:Q59U18
Length = 219
Score = 150 (57.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 43/178 (24%), Positives = 82/178 (46%)
Query: 77 DADNLVA-LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISY 134
D NL+ KI LGD +GKTS + +++ D ++ + G++ + KT+ L G I
Sbjct: 4 DKSNLLKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRL 63
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIII 193
+W+ G + + +P +DS + +D+T++ + ++ +W + + + I +++
Sbjct: 64 QLWDTAGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLV 123
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATY-NINVNKILKFITAKLFD 250
G K D L D + + A F ++T N NV + K I L D
Sbjct: 124 GNKSD----LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPD 177
>UNIPROTKB|Q59U18 [details] [associations]
symbol:YPT6 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0001741 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 EMBL:AACQ01000135
KO:K07976 RefSeq:XP_713074.1 ProteinModelPortal:Q59U18 SMR:Q59U18
GeneID:3645263 KEGG:cal:CaO19.714 Uniprot:Q59U18
Length = 219
Score = 150 (57.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 43/178 (24%), Positives = 82/178 (46%)
Query: 77 DADNLVA-LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISY 134
D NL+ KI LGD +GKTS + +++ D ++ + G++ + KT+ L G I
Sbjct: 4 DKSNLLKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTIRL 63
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIII 193
+W+ G + + +P +DS + +D+T++ + ++ +W + + + I +++
Sbjct: 64 QLWDTAGQERFRSLIPSYIRDSHVAVICYDITNKKSFDNLDKWIKDVKLERGDDVIIVLV 123
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATY-NINVNKILKFITAKLFD 250
G K D L D + + A F ++T N NV + K I L D
Sbjct: 124 GNKSD----LASDKRQVSLDDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSLPD 177
>MGI|MGI:894284 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030141 "secretory granule"
evidence=ISO] [GO:0044257 "cellular protein catabolic process"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:894284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0015031 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 OrthoDB:EOG45757M CTD:201475
KO:K07907 ChiTaRS:RAB12 EMBL:AB232607 EMBL:M79303 EMBL:AK013690
IPI:IPI00169699 PIR:JH0643 RefSeq:NP_077768.2 UniGene:Mm.248313
ProteinModelPortal:P35283 SMR:P35283 IntAct:P35283 STRING:P35283
PhosphoSite:P35283 PaxDb:P35283 PRIDE:P35283 DNASU:19328
Ensembl:ENSMUST00000167962 GeneID:19328 KEGG:mmu:19328
GeneTree:ENSGT00700000104049 InParanoid:P35283 NextBio:296297
Bgee:P35283 CleanEx:MM_RAB12 Genevestigator:P35283
GermOnline:ENSMUSG00000023460 Uniprot:P35283
Length = 243
Score = 153 (58.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 44/178 (24%), Positives = 84/178 (47%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 101
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 102 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 161
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 162 REISRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRN 214
>FB|FBgn0005586 [details] [associations]
symbol:Rab3 "Rab3" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0015031
"protein transport" evidence=IEA;NAS] [GO:0008021 "synaptic
vesicle" evidence=IDA;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0007269 "neurotransmitter secretion"
evidence=NAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0048786 "presynaptic active
zone" evidence=IDA] [GO:0048790 "maintenance of presynaptic active
zone structure" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
EMBL:AE013599 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0030054 GO:GO:0008021
GO:GO:0048786 GO:GO:0006887 PROSITE:PS51419 GO:GO:0007269
eggNOG:COG1100 KO:K07976 GeneTree:ENSGT00690000101942 GO:GO:0048790
EMBL:M64621 EMBL:AB112932 EMBL:AY060449 PIR:JH0425
RefSeq:NP_523687.1 UniGene:Dm.2584 ProteinModelPortal:P25228
SMR:P25228 DIP:DIP-20159N MINT:MINT-946687 STRING:P25228
PaxDb:P25228 PRIDE:P25228 EnsemblMetazoa:FBtr0088257 GeneID:36127
KEGG:dme:Dmel_CG7576 CTD:36127 FlyBase:FBgn0005586
InParanoid:P25228 OMA:RLVDLIC OrthoDB:EOG4TDZ29 PhylomeDB:P25228
ChiTaRS:Rab3 GenomeRNAi:36127 NextBio:796987 Bgee:P25228
GermOnline:CG7576 Uniprot:P25228
Length = 220
Score = 150 (57.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G +
Sbjct: 23 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQER 82
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 83 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQR 142
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 143 VISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>ZFIN|ZDB-GENE-050320-28 [details] [associations]
symbol:rab6bb "RAB6B, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050320-28 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 OrthoDB:EOG4NP74D OMA:PEGMIDI
EMBL:BX649390 EMBL:BC091529 IPI:IPI00503279 RefSeq:NP_001013485.1
UniGene:Dr.28607 SMR:Q5BJD1 Ensembl:ENSDART00000042255
GeneID:541339 KEGG:dre:541339 InParanoid:Q5BJD1 NextBio:20879155
Uniprot:Q5BJD1
Length = 208
Score = 147 (56.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 38/165 (23%), Positives = 76/165 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNINSFQLTSKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q TI + AK LN +SA NV ++ + + A L
Sbjct: 131 EEKRQITI-EEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAAL 174
>UNIPROTKB|J9P652 [details] [associations]
symbol:RAB6A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 EMBL:AAEX03012812 EMBL:AAEX03012813
Ensembl:ENSCAFT00000046903 Uniprot:J9P652
Length = 186
Score = 139 (54.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/166 (22%), Positives = 76/166 (45%)
Query: 94 IGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVAC 153
+GKTS + +++ D + G++ + KT+ + I +W+ G + + +P
Sbjct: 2 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 61
Query: 154 KDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQLPIDLQWTIA 212
+DS + ++D+T+ + + +W R + I +++G K D L Q +I
Sbjct: 62 RDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----LADKRQVSIE 117
Query: 213 SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 118 EGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 162
>ZFIN|ZDB-GENE-040718-428 [details] [associations]
symbol:rab3db "RAB3D, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-428
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 EMBL:CU571395
EMBL:BC075784 IPI:IPI00496059 RefSeq:NP_001002679.1
UniGene:Dr.86400 SMR:Q6DI07 Ensembl:ENSDART00000064031
GeneID:436952 KEGG:dre:436952 CTD:436952 InParanoid:Q6DI07
OMA:GHSACAC NextBio:20831379 Uniprot:Q6DI07
Length = 220
Score = 149 (57.5 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 26 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNNKRIKLQIWDTAGQER 85
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L MFD+T+R + +V W Q + + A I++G K D ++
Sbjct: 86 YRTITTAYYRGAMGFLLMFDITNRDSFNAVRDWATQIKTYSWDNAQVILVGNKCD--LE- 142
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D + ++ A L F +SA +INV ++ + + + D
Sbjct: 143 --DERLIPTEDSQRLAHELGFQFFEASAKDSINVKQVFECLVDVICD 187
>UNIPROTKB|F1NC27 [details] [associations]
symbol:RAB21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 OMA:FQKVKSW
GeneTree:ENSGT00640000091439 EMBL:AADN02009843 IPI:IPI00581530
Ensembl:ENSGALT00000016553 Uniprot:F1NC27
Length = 228
Score = 150 (57.9 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 40/176 (22%), Positives = 84/176 (47%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 23 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 82
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 83 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 142
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 143 ERHVSVQ-----EAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 193
>ASPGD|ASPL0000069770 [details] [associations]
symbol:srgC species:162425 "Emericella nidulans"
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031521
"spitzenkorper" evidence=IDA] [GO:0042147 "retrograde transport,
endosome to Golgi" evidence=IMP] [GO:0006886 "intracellular protein
transport" evidence=IMP] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001304 HOGENOM:HOG000233968 OMA:PEGMIDI
ProteinModelPortal:C8VBU6 EnsemblFungi:CADANIAT00000715
Uniprot:C8VBU6
Length = 184
Score = 138 (53.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/173 (21%), Positives = 80/173 (46%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 14 LKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 73
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++ + ++ +W R + I +++G K D
Sbjct: 74 GQERFRSLIPSYIRDSSVAVVVYDISNAKSFQNTRKWIDDVRGERGNDVIIVLVGNKTD- 132
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKLFDI 251
L D + +Q AK N +F +SA NV ++ + I L D+
Sbjct: 133 ---LS-DKREVTTAQGEEEAKK-NGLMFIETSAKVGHNVKQLFRRIAQALPDL 180
>POMBASE|SPAC6F6.15 [details] [associations]
symbol:ypt5 "GTPase Ypt5" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=ISO] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005770 "late endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006995
"cellular response to nitrogen starvation" evidence=IMP]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IC] [GO:0031338 "regulation of vesicle fusion"
evidence=IMP] [GO:0033157 "regulation of intracellular protein
transport" evidence=IC] [GO:0070314 "G1 to G0 transition"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC6F6.15 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0007264 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 PROSITE:PS51419 GO:GO:0006995 eggNOG:COG1100
GO:GO:0070314 KO:K07976 GO:GO:0033157 HOGENOM:HOG000233968
OMA:GTQGKIC GO:GO:0031338 OrthoDB:EOG4S1XHJ EMBL:Z22220 PIR:A47733
PIR:S34729 RefSeq:NP_593907.1 ProteinModelPortal:P36586 SMR:P36586
STRING:P36586 PRIDE:P36586 EnsemblFungi:SPAC6F6.15.1 GeneID:2542248
KEGG:spo:SPAC6F6.15 NextBio:20803313 Uniprot:P36586
Length = 211
Score = 147 (56.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 80 NLVAL--KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV-RGARISYSI 136
N+V + K+ LLGD +GK+S + ++V D+ + G + +TL + + I
Sbjct: 9 NVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEI 68
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GT 195
W+ G + + P+ +++ + ++D+T +L+ W ++ ++ I I + G
Sbjct: 69 WDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGN 128
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
K D L + + + A AYA N F +SA NVN++ I KL
Sbjct: 129 KLD----LAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 144 (55.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 39/169 (23%), Positives = 80/169 (47%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G ++ I
Sbjct: 4 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTVEINGEKVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+TS + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + ++ + A +A + LF +SA NINV ++ IT
Sbjct: 122 NDDPERKVVETE-----DAYKFAGQMEIQLFETSAKENINVEEMFNCIT 165
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 144 (55.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G ++ I
Sbjct: 4 DYDHL--FKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+TS + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + ++ + A +A + LF +SA N+NV ++ IT
Sbjct: 122 NDDPERKVVETE-----DAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 144 (55.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G ++ I
Sbjct: 4 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+TS + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + ++ + A +A + LF +SA N+NV ++ IT
Sbjct: 122 NDDPERKVVETE-----DAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 144 (55.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G ++ I
Sbjct: 4 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+TS + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + ++ + A +A + LF +SA N+NV ++ IT
Sbjct: 122 NDDPERKVVETE-----DAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 144 (55.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G ++ I
Sbjct: 4 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+TS + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + ++ + A +A + LF +SA N+NV ++ IT
Sbjct: 122 NDDPERKVVETE-----DAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 144 (55.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 38/169 (22%), Positives = 80/169 (47%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G ++ I
Sbjct: 4 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+TS + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + ++ + A +A + LF +SA N+NV ++ IT
Sbjct: 122 NDDPERKVVETE-----DAYKFAGQMGIQLFETSAKENVNVEEMFNCIT 165
>ZFIN|ZDB-GENE-060929-1062 [details] [associations]
symbol:zgc:154045 "zgc:154045" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060929-1062 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07890 OrthoDB:EOG4W0XF0 EMBL:BC124522
IPI:IPI00803714 RefSeq:NP_001070133.1 UniGene:Dr.107584
ProteinModelPortal:Q08BX0 SMR:Q08BX0 GeneID:767727 KEGG:dre:767727
InParanoid:Q08BX0 NextBio:20918113 Bgee:Q08BX0 Uniprot:Q08BX0
Length = 216
Score = 148 (57.2 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 39/177 (22%), Positives = 85/177 (48%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 10 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 70 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 129
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + ++ +A YA+++ A + +SA N + ++ + ++ + ER+
Sbjct: 130 ERHVSVE-----EAEGYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQLEERS 181
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 148 (57.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 37/168 (22%), Positives = 81/168 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
++ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 RVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>FB|FBgn0015797 [details] [associations]
symbol:Rab6 "Rab6" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0001745 "compound
eye morphogenesis" evidence=IGI] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007293 "germarium-derived egg chamber formation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008103 "oocyte
microtubule cytoskeleton polarization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0006887
"exocytosis" evidence=IMP] [GO:0031982 "vesicle" evidence=ISS]
[GO:0045467 "R7 cell development" evidence=IMP] [GO:0060078
"regulation of postsynaptic membrane potential" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0016023 "cytoplasmic membrane-bounded
vesicle" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007411 GO:GO:0008103
GO:GO:0007264 EMBL:AE014134 GO:GO:0015031 GO:GO:0045467
GO:GO:0003924 GO:GO:0006887 eggNOG:COG1100 GO:GO:0007293
GO:GO:0045451 KO:K07976 GO:GO:0060078 GeneTree:ENSGT00600000084341
OMA:TTKWIED EMBL:AY060261 EMBL:D84314 RefSeq:NP_477172.1
UniGene:Dm.4067 PDB:2Y8E PDBsum:2Y8E SMR:O18334 MINT:MINT-828566
STRING:O18334 EnsemblMetazoa:FBtr0080361 GeneID:34636
KEGG:dme:Dmel_CG6601 UCSC:CG6601-RA CTD:34636 FlyBase:FBgn0015797
InParanoid:O18334 OrthoDB:EOG45X6C4 EvolutionaryTrace:O18334
GenomeRNAi:34636 NextBio:789437 Uniprot:O18334
Length = 208
Score = 146 (56.5 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 36/165 (21%), Positives = 74/165 (44%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 14 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + +W R + I +++G K D L
Sbjct: 74 FRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTD----L 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + AK LN +SA NV ++ + + A L
Sbjct: 130 S-DKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 173
>WB|WBGene00004270 [details] [associations]
symbol:rab-6.2 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0031985 "Golgi cisterna" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006915
GO:GO:0007264 GO:GO:0016477 GO:GO:0008406 GO:GO:0015031
GO:GO:0048477 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0031985
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00600000084341
EMBL:FO081722 PIR:T34375 RefSeq:NP_510790.1
ProteinModelPortal:Q22782 SMR:Q22782 IntAct:Q22782 STRING:Q22782
PaxDb:Q22782 PRIDE:Q22782 EnsemblMetazoa:T25G12.4 GeneID:181759
KEGG:cel:CELE_T25G12.4 UCSC:T25G12.4 CTD:181759 WormBase:T25G12.4
InParanoid:Q22782 OMA:TTKWIED NextBio:915226 ArrayExpress:Q22782
Uniprot:Q22782
Length = 205
Score = 145 (56.1 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 37/169 (21%), Positives = 74/169 (43%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 8 LKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 67
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + +W R + I +++G K D
Sbjct: 68 GQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTD- 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L D + + AK LN +SA NV ++ + I L
Sbjct: 127 ---LS-DKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGAL 171
>ZFIN|ZDB-GENE-050522-555 [details] [associations]
symbol:rab12 "RAB12, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-555 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:201475 KO:K07907
GeneTree:ENSGT00700000104049 EMBL:CABZ01050277 EMBL:CABZ01050278
EMBL:CABZ01050279 EMBL:BC095608 IPI:IPI00499927
RefSeq:NP_001018466.1 UniGene:Dr.84887 SMR:Q502Q0
Ensembl:ENSDART00000127124 GeneID:553657 KEGG:dre:553657
InParanoid:Q502Q0 NextBio:20880391 Uniprot:Q502Q0
Length = 235
Score = 150 (57.9 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 43/172 (25%), Positives = 83/172 (48%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 36 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 95
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + + +W + K ++ A +++G K D
Sbjct: 96 RFNSITSAYYRGAKGIVLVYDITKQETFEDLPKWMKMIDKYASEDAELLLVGNKLDCESD 155
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIP 252
I Q QA +A ++ F +SA N NV++I LK + L +P
Sbjct: 156 RAISRQ-----QAERFASRISGMRFCEASAKDNFNVDEIFLKLVDDILSKMP 202
>GENEDB_PFALCIPARUM|PF11_0183 [details] [associations]
symbol:PF11_0183 "GTP-binding nuclear protein
ran/tc4" species:5833 "Plasmodium falciparum" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006405 "RNA
export from nucleus" evidence=ISS] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0051726 EMBL:AE014186 HSSP:P01112 HOGENOM:HOG000216664
KO:K07936 GO:GO:0006405 OMA:ERVCENI ProtClustDB:PTZ00132
GenomeReviews:AE014186_GR RefSeq:XP_001347854.1
ProteinModelPortal:Q7KQK6 PRIDE:Q7KQK6
EnsemblProtists:PF11_0183:mRNA GeneID:810730 KEGG:pfa:PF11_0183
EuPathDB:PlasmoDB:PF3D7_1117700 Uniprot:Q7KQK6
Length = 214
Score = 147 (56.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GKT+F+++++ E E+ P G+ + + +++W+ G K
Sbjct: 11 KLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWDTAGQEK 70
Query: 145 ---AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+D + K AI+ MFD++SR T K+V WY+ + +T +++G K D +
Sbjct: 71 FGGLRDGYYI--KSDCAII-MFDVSSRITYKNVPNWYRDITRVCETIPMVLVGNKVD--V 125
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ D Q + S+ + + N + SA N N K ++ +L + P
Sbjct: 126 K---DRQ--VKSRQIQFHRKRNLQYYDLSARSNYNFEKPFLWLARRLSNQP 171
>UNIPROTKB|F1MPP1 [details] [associations]
symbol:LOC781001 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0003924 GO:GO:0019003 IPI:IPI00697565
OMA:FQKVKSW GeneTree:ENSGT00640000091439 EMBL:DAAA02073306
Ensembl:ENSBTAT00000025807 Uniprot:F1MPP1
Length = 214
Score = 147 (56.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 41/181 (22%), Positives = 85/181 (46%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + Y ++ + + K L + G R++ +IW
Sbjct: 3 AGRTYSFKVVLLGEGCVGKTSLVLCYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 62
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 63 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 122
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 123 VDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 177
Query: 257 R 257
R
Sbjct: 178 R 178
>UNIPROTKB|Q7KQK6 [details] [associations]
symbol:Ran "GTP-binding nuclear protein ran/tc4"
species:36329 "Plasmodium falciparum 3D7" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006405 "RNA export from nucleus" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0051726 EMBL:AE014186 HSSP:P01112 HOGENOM:HOG000216664
KO:K07936 GO:GO:0006405 OMA:ERVCENI ProtClustDB:PTZ00132
GenomeReviews:AE014186_GR RefSeq:XP_001347854.1
ProteinModelPortal:Q7KQK6 PRIDE:Q7KQK6
EnsemblProtists:PF11_0183:mRNA GeneID:810730 KEGG:pfa:PF11_0183
EuPathDB:PlasmoDB:PF3D7_1117700 Uniprot:Q7KQK6
Length = 214
Score = 147 (56.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 44/171 (25%), Positives = 84/171 (49%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GKT+F+++++ E E+ P G+ + + +++W+ G K
Sbjct: 11 KLILVGDGGVGKTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWDTAGQEK 70
Query: 145 ---AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+D + K AI+ MFD++SR T K+V WY+ + +T +++G K D +
Sbjct: 71 FGGLRDGYYI--KSDCAII-MFDVSSRITYKNVPNWYRDITRVCETIPMVLVGNKVD--V 125
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ D Q + S+ + + N + SA N N K ++ +L + P
Sbjct: 126 K---DRQ--VKSRQIQFHRKRNLQYYDLSARSNYNFEKPFLWLARRLSNQP 171
>TAIR|locus:2024992 [details] [associations]
symbol:RABA2b "RAB GTPase homolog A2B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0009504 "cell plate" evidence=IDA] [GO:0006457
"protein folding" evidence=RCA] [GO:0009408 "response to heat"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0009504 EMBL:AC022464 KO:K07976
IPI:IPI00522346 PIR:A86209 RefSeq:NP_172221.1 UniGene:At.51514
HSSP:P07560 ProteinModelPortal:Q9LNW1 SMR:Q9LNW1 PaxDb:Q9LNW1
PRIDE:Q9LNW1 EnsemblPlants:AT1G07410.1 GeneID:837253
KEGG:ath:AT1G07410 TAIR:At1g07410 InParanoid:Q9LNW1 OMA:QVDNKTV
Genevestigator:Q9LNW1 Uniprot:Q9LNW1
Length = 214
Score = 147 (56.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+GD +GK++ L ++ +E G+ +TL V G + IW+ G +
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+ + ++ L ++D+T R T ++V+RW ++ R + I I++ D L
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLR 133
Query: 205 IDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++A + R+ A+ + +SA N+ K + I ++++ I
Sbjct: 134 -----SVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHI 176
>UNIPROTKB|H3BME4 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264
GO:GO:0015031 GO:GO:0019003 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285
EMBL:Z98881 Ensembl:ENST00000569575 Bgee:H3BME4 Uniprot:H3BME4
Length = 157
Score = 137 (53.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFF 228
L Q QARAYA+ N FF
Sbjct: 130 LAFKRQ-VPTEQARAYAEK-NCMTFF 153
>UNIPROTKB|H7BYW1 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP002770
EMBL:AP002993 HGNC:HGNC:9786 ChiTaRS:RAB6A Ensembl:ENST00000400470
Uniprot:H7BYW1
Length = 174
Score = 137 (53.3 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 36/156 (23%), Positives = 71/156 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 7 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 66
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 67 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----L 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
Q +I R AK LN +SA NV +
Sbjct: 123 ADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQ 157
>ZFIN|ZDB-GENE-031118-30 [details] [associations]
symbol:rab5c "RAB5C, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030100 "regulation of
endocytosis" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005768 "endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-031118-30
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005768 GO:GO:0001525 GO:GO:0030100 GO:GO:0016337
GO:GO:0001702 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P35278 GeneTree:ENSGT00640000091139
CTD:5878 KO:K07889 OMA:QCCGGGN EMBL:BX005093 EMBL:BC045466
EMBL:BC065634 IPI:IPI00499049 RefSeq:NP_958909.1 UniGene:Dr.5030
SMR:Q7ZVP2 IntAct:Q7ZVP2 STRING:Q7ZVP2 Ensembl:ENSDART00000034536
GeneID:386807 KEGG:dre:386807 InParanoid:Q7ZVP2 OrthoDB:EOG42FSJK
NextBio:20814025 Uniprot:Q7ZVP2
Length = 221
Score = 148 (57.2 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 42/172 (24%), Positives = 82/172 (47%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +TL + + + IW+
Sbjct: 18 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWD 77
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 78 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKA 137
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A+AYA N+ LF +SA +NVN+I I KL
Sbjct: 138 DLANKRAVDFQ-----EAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 183
>WB|WBGene00004277 [details] [associations]
symbol:rab-18 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0007264 GO:GO:0015031
GO:GO:0042127 GO:GO:0007281 PROSITE:PS51419 GO:GO:0040020
eggNOG:COG1100 InterPro:IPR025662 GO:GO:0040022
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 KO:K07910
EMBL:FO080242 RefSeq:NP_741092.1 RefSeq:NP_741093.2
ProteinModelPortal:Q8MXS1 SMR:Q8MXS1 PaxDb:Q8MXS1 PRIDE:Q8MXS1
EnsemblMetazoa:Y92C3B.3b GeneID:175272 KEGG:cel:CELE_Y92C3B.3
UCSC:Y92C3B.3b CTD:175272 WormBase:Y92C3B.3a WormBase:Y92C3B.3b
InParanoid:Q8MXS1 OMA:FAKRHRT NextBio:887480 Uniprot:Q8MXS1
Length = 203
Score = 144 (55.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 43/190 (22%), Positives = 90/190 (47%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LKI ++G+ +GK+S + ++V D + + G++ ++ + G R+ +IW+
Sbjct: 9 LTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-C-NQTAIPIIIGTKFD 198
G + + P + + ++ ++D+TSR + + + W Q+ C N I +++ K D
Sbjct: 69 GQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKID 128
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKLFDIP--WTL 255
+P + + +AK + TLF +SA V + + K+ P W
Sbjct: 129 ----MPNRV--VTREEGLKFAKR-HRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDN 181
Query: 256 ER-NLTIGEP 264
+R + +G+P
Sbjct: 182 DRPSFRLGQP 191
>MGI|MGI:1917084 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0007030 "Golgi organization" evidence=ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1917084 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AJ534465 IPI:IPI00468209 RefSeq:NP_001034483.1
UniGene:Mm.37380 ProteinModelPortal:Q8CG50 SMR:Q8CG50
PhosphoSite:Q8CG50 PaxDb:Q8CG50 PRIDE:Q8CG50
Ensembl:ENSMUST00000078647 GeneID:69834 KEGG:mmu:69834
InParanoid:Q8CG50 NextBio:330445 Bgee:Q8CG50 CleanEx:MM_RAB43
Genevestigator:Q8CG50 GermOnline:ENSMUSG00000030055 Uniprot:Q8CG50
Length = 210
Score = 146 (56.5 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 85 KISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GKT ++++ G + GS G++ KTL ++G R+ IW+ G
Sbjct: 18 KLVLVGDASVGKTCVVQRFKTGAFSARQGST-IGVDFTMKTLEIQGKRVKLQIWDTAGQE 76
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + + + +D++ R T SV W + RK + ++IG K D DF
Sbjct: 77 RFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADF 136
Query: 201 IQLPI 205
++P+
Sbjct: 137 REVPL 141
>POMBASE|SPAC9E9.07c [details] [associations]
symbol:ypt2 "GTPase Ypt2" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006887
"exocytosis" evidence=IMP] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC9E9.07c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0006893 GO:GO:0006906
GO:GO:0065007 HOGENOM:HOG000233968 KO:K07901 OMA:SNVEQHA
OrthoDB:EOG4X3M9K EMBL:X52469 EMBL:X52864 PIR:S12790
RefSeq:NP_594580.1 ProteinModelPortal:P17609 SMR:P17609
STRING:P17609 PRIDE:P17609 EnsemblFungi:SPAC9E9.07c.1
GeneID:2543280 KEGG:spo:SPAC9E9.07c NextBio:20804300 Uniprot:P17609
Length = 200
Score = 143 (55.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 37/157 (23%), Positives = 73/157 (46%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++ D G++ +T+ + G RI IW+ G
Sbjct: 10 IKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ IL ++D+T + + +V W+ + ++ I+IG K D Q
Sbjct: 70 RFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQ 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
+ + Q +A A L +SA N+NV++
Sbjct: 130 RQVSFE-----QGQALADELGVKFLEASAKTNVNVDE 161
>DICTYBASE|DDB_G0291235 [details] [associations]
symbol:ranA "GTP-binding nuclear protein Ran"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0005813 "centrosome" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 dictyBase:DDB_G0291235 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005634 GO:GO:0005813 GO:GO:0006886
GO:GO:0007264 GO:GO:0045335 EMBL:AAFI02000177
GenomeReviews:CM000155_GR GO:GO:0003924 GO:GO:0006913
eggNOG:COG1100 KO:K07936 OMA:ERVCENI EMBL:L09720 PIR:S35619
RefSeq:XP_635125.1 ProteinModelPortal:P33519 SMR:P33519
IntAct:P33519 STRING:P33519 EnsemblProtists:DDB0215409
GeneID:8628071 KEGG:ddi:DDB_G0291235 ProtClustDB:PTZ00132
Uniprot:P33519
Length = 212
Score = 146 (56.5 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 50/192 (26%), Positives = 93/192 (48%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GKT+F+++++ E E P G+++ +I +++W+ G
Sbjct: 7 IKLVLVGDGGVGKTTFVQRHLTGEFEPRYIPTLGVSVHPLIFYTNFGKIHFNVWDTAGQE 66
Query: 144 K---AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIII-GTKFD 198
K +D + + + AI+ MFD+TSR + K+V W+ R C IPI++ G K D
Sbjct: 67 KFGGLRDGYYI--QGNCAII-MFDVTSRISYKNVPNWHSDLTRVCEN--IPIVLCGNKVD 121
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD---IPWTL 255
+ + SQ + + N + + SA N N K ++T+KL +
Sbjct: 122 ------VKDRKVKPSQI-VFHRRYNLSYYDVSAKSNYNFEKPFVWLTSKLLGNKAVTLVQ 174
Query: 256 ERNLTIGEPIID 267
+ L + E ++D
Sbjct: 175 QPTLKLPETVLD 186
>UNIPROTKB|Q94986 [details] [associations]
symbol:rab-3 "Ras-related protein Rab-3" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 GO:GO:0008021 GO:GO:0003924 GO:GO:0007617
GO:GO:0040017 GO:GO:0007271 GO:GO:0006935 GO:GO:0043051
GO:GO:0006887 PROSITE:PS51419 eggNOG:COG1100 EMBL:FO080599
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101942
EMBL:U68265 EMBL:U68266 EMBL:AB112928 RefSeq:NP_001021974.1
UniGene:Cel.19709 ProteinModelPortal:Q94986 SMR:Q94986
STRING:Q94986 PaxDb:Q94986 PRIDE:Q94986 EnsemblMetazoa:C18A3.6b.1
EnsemblMetazoa:C18A3.6b.2 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 WormBase:C18A3.6b NextBio:881917
ArrayExpress:Q94986 Uniprot:Q94986
Length = 219
Score = 147 (56.8 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 40/168 (23%), Positives = 77/168 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G +
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + SV W Q + + + A +++G K D
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD----- 138
Query: 204 PIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+D + ++ + R A L F +SA NINV + + + + D
Sbjct: 139 -MDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICD 185
>ZFIN|ZDB-GENE-061215-104 [details] [associations]
symbol:rab39b "RAB39B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-061215-104 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J CTD:116442
EMBL:AL954129 EMBL:BC128658 IPI:IPI00503702 RefSeq:NP_001073492.1
UniGene:Dr.108453 Ensembl:ENSDART00000101406 GeneID:566010
KEGG:dre:566010 InParanoid:A1A5H9 OMA:NDESECL NextBio:20887972
Uniprot:A1A5H9
Length = 213
Score = 146 (56.5 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 41/179 (22%), Positives = 84/179 (46%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ--TAIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++AR Q + + ++
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL 120
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D Q + Q +A A A +SA INV + +T +F++
Sbjct: 121 VGHKCDLEPQRQVSQQ-----EAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFEL 174
>UNIPROTKB|H0YGL6 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP002770
EMBL:AP002993 HGNC:HGNC:9786 ChiTaRS:RAB6A Ensembl:ENST00000541973
Uniprot:H0YGL6
Length = 201
Score = 143 (55.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 39/166 (23%), Positives = 77/166 (46%)
Query: 94 IGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVAC 153
+GKTS + +++ D + G++ + KT+ + I +W+ G + + +P
Sbjct: 17 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYI 76
Query: 154 KDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQLPIDLQWTIA 212
+DS A + ++D+T+ + + +W R + I +++G K D L Q +I
Sbjct: 77 RDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD----LADKRQVSIE 132
Query: 213 SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 133 EGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 177
>UNIPROTKB|H3BNV8 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0019003 EMBL:Z98883 EMBL:Z84479 HGNC:HGNC:18285 EMBL:Z98881
Ensembl:ENST00000566290 Bgee:H3BNV8 Uniprot:H3BNV8
Length = 213
Score = 145 (56.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>ZFIN|ZDB-GENE-040426-1983 [details] [associations]
symbol:rab42a "RAB42, member RAS oncogene family
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-1983
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HSSP:P01112 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 EMBL:CR385068 OMA:SAKCNSN
EMBL:BC060898 IPI:IPI00498203 RefSeq:NP_998207.1 UniGene:Dr.132981
Ensembl:ENSDART00000046530 GeneID:406315 KEGG:dre:406315 CTD:406315
InParanoid:Q6P977 OrthoDB:EOG4D7Z6M NextBio:20817942 Uniprot:Q6P977
Length = 213
Score = 145 (56.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 42/170 (24%), Positives = 80/170 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGDA 143
+I LLGD +GK+S L+++ P G++ +++ + G +I +W+ G
Sbjct: 10 RIILLGDSTVGKSSLLKRFTDGIYSDVADPTVGVDFYARSIDIEPGVKIKLQLWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK--CNQTAIPIIIGTKFDDFI 201
+ + ++S+ L +FDLT+R T V W+++ + + I+IG K D
Sbjct: 70 RFRSITTSYYRNSVGGLLVFDLTNRKTFDHVREWHREVSEHILPHHMVYILIGHKSD--- 126
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L D + T +A A L +SA N NV + + +T ++++
Sbjct: 127 -LSRDRKVT-RDEAEQLAADLGIRYVETSAKCNSNVERAFELLTRDIYEL 174
>WB|WBGene00004275 [details] [associations]
symbol:rab-11.2 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0040010 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664
KO:K07904 EMBL:Z93391 RefSeq:NP_001251691.1
ProteinModelPortal:Q1ZXR4 SMR:Q1ZXR4 PaxDb:Q1ZXR4
EnsemblMetazoa:W04G5.2a GeneID:4363014 KEGG:cel:CELE_W04G5.2
UCSC:W04G5.2 CTD:4363014 WormBase:W04G5.2a InParanoid:Q1ZXR4
NextBio:959487 Uniprot:Q1ZXR4
Length = 198
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 38/168 (22%), Positives = 77/168 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+G+ +GK++ L ++ +E P G+ K + V G + IW+ G +
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D++ T +SV +W + R N+ + ++G K D +
Sbjct: 70 FRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSHAV 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
P D +A+ YA+ + + +SA N NV I +++ +
Sbjct: 130 PTD-------EAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKL 170
>UNIPROTKB|E1C0Q9 [details] [associations]
symbol:RAB26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104031 OMA:PSEPRFR
EMBL:AADN02023658 EMBL:AADN02023659 IPI:IPI00820336
ProteinModelPortal:E1C0Q9 Ensembl:ENSGALT00000040425
NextBio:20819995 Uniprot:E1C0Q9
Length = 253
Score = 149 (57.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 37/139 (26%), Positives = 69/139 (49%)
Query: 63 TTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGS--PGEGLNM 120
T+ RPSL S D +A K+ L+GD +GKT L ++ D GS G++
Sbjct: 44 TSGRPSLSSSGEFYD----LAFKVMLVGDSGVGKTCLLVRFK-DGAFLAGSFISTVGIDF 98
Query: 121 MDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ 180
+K L V G ++ IW+ G + + +D+ A+L ++D+T++ + ++ W +
Sbjct: 99 RNKVLTVDGVKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTE 158
Query: 181 ARK-CNQTAIPIIIGTKFD 198
+ Q + +++G K D
Sbjct: 159 IHEYAQQDVVLMLLGNKVD 177
>TAIR|locus:2169053 [details] [associations]
symbol:RABA5a "RAB GTPase homolog A5A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005774
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB025628 PROSITE:PS51419 eggNOG:COG1100 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 EMBL:BT004809 EMBL:AK222160
EMBL:AK227772 IPI:IPI00528196 RefSeq:NP_199563.1 UniGene:At.29886
UniGene:At.29887 ProteinModelPortal:Q9FGK5 SMR:Q9FGK5 IntAct:Q9FGK5
PaxDb:Q9FGK5 PRIDE:Q9FGK5 EnsemblPlants:AT5G47520.1 GeneID:834802
KEGG:ath:AT5G47520 TAIR:At5g47520 InParanoid:Q9FGK5 OMA:FARNEFY
PhylomeDB:Q9FGK5 ProtClustDB:CLSN2686382 Genevestigator:Q9FGK5
Uniprot:Q9FGK5
Length = 221
Score = 146 (56.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 37/168 (22%), Positives = 78/168 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+GD +GK++ L ++ DE G+ + + + G I IW+ G +
Sbjct: 16 KIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQER 75
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D++ R T S+ RW + + + I++G K D ++
Sbjct: 76 FRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSD--LK- 132
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
DL+ ++ +A A+A +SA + NV + + ++++I
Sbjct: 133 --DLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNI 178
>UNIPROTKB|Q5ZIP7 [details] [associations]
symbol:RAB5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0030139 "endocytic
vesicle" evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA]
[GO:0045921 "positive regulation of exocytosis" evidence=IEA]
[GO:0051489 "regulation of filopodium assembly" evidence=IEA]
[GO:2000286 "receptor internalization involved in canonical Wnt
receptor signaling pathway" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0045121 GO:GO:0030139 GO:GO:0001726 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:AADN02001071 EMBL:AADN02001072 EMBL:AJ720737
IPI:IPI00596261 RefSeq:NP_001006363.1 UniGene:Gga.21473 SMR:Q5ZIP7
STRING:Q5ZIP7 Ensembl:ENSGALT00000018393 GeneID:420649
KEGG:gga:420649 InParanoid:Q5ZIP7 NextBio:20823533 Uniprot:Q5ZIP7
Length = 215
Score = 145 (56.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 42/175 (24%), Positives = 85/175 (48%)
Query: 77 DADNLVA-LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+A N + K+ LLG+ +GK+S + ++V + + G + +T+ + + +
Sbjct: 13 NAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFE 72
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIG 194
IW+ G + P+ + + A + ++D+T+ + W ++ R+ + + + G
Sbjct: 73 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALAG 132
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
K D + +D Q +A+AYA N+ LF +SA ++NVN+I I KL
Sbjct: 133 NKADLANKRAVDFQ-----EAQAYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>RGD|3527 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005525 "GTP binding" evidence=TAS] [GO:0005764 "lysosome"
evidence=ISO;ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO;ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3527
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0030141 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 CTD:201475 KO:K07907 EMBL:M83676
IPI:IPI00876621 PIR:C42148 RefSeq:NP_037149.1 UniGene:Rn.11021
ProteinModelPortal:P35284 SMR:P35284 IntAct:P35284 STRING:P35284
PRIDE:P35284 GeneID:25530 KEGG:rno:25530 NextBio:607023
Genevestigator:P35284 Uniprot:P35284
Length = 243
Score = 148 (57.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 101
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 102 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 161
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + R+
Sbjct: 162 REISRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRS 214
>WB|WBGene00004267 [details] [associations]
symbol:rab-3 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0007271 "synaptic transmission, cholinergic"
evidence=IMP] [GO:0040012 "regulation of locomotion" evidence=IMP]
[GO:0007617 "mating behavior" evidence=IMP] [GO:0006935
"chemotaxis" evidence=IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0008021 "synaptic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0003924 GO:GO:0007617 GO:GO:0040017 GO:GO:0007271
GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 147 (56.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/168 (23%), Positives = 77/168 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G +
Sbjct: 38 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 97
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + SV W Q + + + A +++G K D
Sbjct: 98 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD----- 152
Query: 204 PIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+D + ++ + R A L F +SA NINV + + + + D
Sbjct: 153 -MDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICD 199
>UNIPROTKB|Q95QV3 [details] [associations]
symbol:rab-3 "Protein RAB-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0003924 GO:GO:0007617 GO:GO:0040017
GO:GO:0007271 GO:GO:0006935 GO:GO:0043051 EMBL:FO080599 KO:K07976
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00690000101942
OMA:QLTEQPA UniGene:Cel.19709 GeneID:173971 KEGG:cel:CELE_C18A3.6
UCSC:C18A3.6a CTD:173971 NextBio:881917 RefSeq:NP_001021973.1
ProteinModelPortal:Q95QV3 SMR:Q95QV3 STRING:Q95QV3 PRIDE:Q95QV3
EnsemblMetazoa:C18A3.6a WormBase:C18A3.6a InParanoid:Q95QV3
ArrayExpress:Q95QV3 Uniprot:Q95QV3
Length = 233
Score = 147 (56.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/168 (23%), Positives = 77/168 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G +
Sbjct: 38 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 97
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + SV W Q + + + A +++G K D
Sbjct: 98 YRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCD----- 152
Query: 204 PIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+D + ++ + R A L F +SA NINV + + + + D
Sbjct: 153 -MDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICD 199
>DICTYBASE|DDB_G0274943 [details] [associations]
symbol:ranB "GTP-binding nuclear protein Ran"
species:44689 "Dictyostelium discoideum" [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR002041
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627 SMART:SM00176
dictyBase:DDB_G0274943 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006913
GenomeReviews:CM000151_GR EMBL:AAFI02000012 GO:GO:0005622
eggNOG:COG1100 RefSeq:XP_644189.1 ProteinModelPortal:Q554Y4
SMR:Q554Y4 EnsemblProtists:DDB0229425 GeneID:8619618
KEGG:ddi:DDB_G0274943 InParanoid:Q554Y4 Uniprot:Q554Y4
Length = 754
Score = 157 (60.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/116 (29%), Positives = 63/116 (54%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GKT+FL++++ E ++ P G+ + + L +++ IW+ GD
Sbjct: 53 IKLILVGDSGVGKTTFLKRHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDE 112
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFD 198
K + + S + MFD++SR + ++V W+ + K IPII +G K D
Sbjct: 113 KFEVFRHLYYVGSQCAIIMFDVSSRVSYRNVPSWFNELTKELGNNIPIILVGNKVD 168
>TAIR|locus:2060415 [details] [associations]
symbol:RABH1d "RAB GTPase homolog H1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0009860 "pollen tube growth" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0007264 GO:GO:0000139 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AC007168 KO:K07976 HOGENOM:HOG000233968 IPI:IPI00547775
PIR:H84610 RefSeq:NP_179816.1 UniGene:At.52865 HSSP:Q26000
ProteinModelPortal:Q9SID8 SMR:Q9SID8 PaxDb:Q9SID8 PRIDE:Q9SID8
EnsemblPlants:AT2G22290.1 GeneID:816761 KEGG:ath:AT2G22290
TAIR:At2g22290 InParanoid:Q9SID8 OMA:SKGREYG PhylomeDB:Q9SID8
ProtClustDB:CLSN2683734 Genevestigator:Q9SID8 Uniprot:Q9SID8
Length = 207
Score = 143 (55.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 38/171 (22%), Positives = 80/171 (46%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTA---IPIIIGTKF 197
G + + +P +DS + ++D+ +R + + +W ++ R N+ A I +++G K
Sbjct: 67 GQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVR--NERAGDVIIVLVGNKT 124
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + ++ S+ R Y T SA N+ + + I A L
Sbjct: 125 DLVEKRQVSIEEG-DSKGREYGVMFIET----SAKAGFNIKPLFRKIAAAL 170
>UNIPROTKB|F1PE57 [details] [associations]
symbol:RAB42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:115273 KO:K07929 EMBL:AAEX03001701
OMA:RFRCITR RefSeq:XP_544457.1 Ensembl:ENSCAFT00000018630
GeneID:487331 KEGG:cfa:487331 Uniprot:F1PE57
Length = 220
Score = 145 (56.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 44/164 (26%), Positives = 79/164 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGD-------EKEQGGSPGEGLNMMDKTLLVR-GARISYSI 136
+I+LLGD +GKTS L +YV E E +P G+ + L +R G R+ +
Sbjct: 11 RIALLGDAAVGKTSLLRRYVAGAPGTPEPEPEPEPAPTVGVEFYSRMLQLRAGPRVKLQL 70
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ--ARKCNQTAIPIIIG 194
W+ G + + ++ + +L +FD+T+R + + + W+Q+ A + I ++IG
Sbjct: 71 WDTAGHERFRCITRSFYRNVVGVLLVFDVTNRKSFEHICDWHQEVIATQGPDKVIFLLIG 130
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
K D ++ + A +A A +L +SA N NV+
Sbjct: 131 HKSD--LR---STRCVSAQEAEELAASLGMAFMETSAKNNCNVD 169
>FB|FBgn0052670 [details] [associations]
symbol:Rab9Fb "Rab at 9Fb" species:7227 "Drosophila
melanogaster" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AE014298
KO:K07976 HSSP:P07560 GeneTree:ENSGT00700000104049 EMBL:BT024998
RefSeq:NP_727472.1 UniGene:Dm.31082 SMR:Q8IR98
EnsemblMetazoa:FBtr0073401 GeneID:32029 KEGG:dme:Dmel_CG32670
UCSC:CG32670-RA CTD:32029 FlyBase:FBgn0052670 InParanoid:Q8IR98
OMA:KTCLLQR OrthoDB:EOG4RN8RG GenomeRNAi:32029 NextBio:776451
Uniprot:Q8IR98
Length = 214
Score = 144 (55.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/167 (21%), Positives = 79/167 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI +LGD +GK+ L ++ + + G++ + + + G + IW+ GD +
Sbjct: 9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQL 203
+ LP + + IL ++D+TS + +++ W ++ R+ + ++ + ++G K DD
Sbjct: 69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+D + Q YA + SA NVN + ++ +++
Sbjct: 125 -LDNRQVRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>UNIPROTKB|A8MSP2 [details] [associations]
symbol:RAB37 "cDNA FLJ45130 fis, clone BRAWH3037428, highly
similar to Homo sapiens RAB37, member RAS oncogene family (RAB37),
transcript variant 3, mRNA" species:9606 "Homo sapiens" [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:CH471099 HOVERGEN:HBG009351 EMBL:AC016888 EMBL:AC064805
HOGENOM:HOG000233968 OrthoDB:EOG4VMFG9 UniGene:Hs.351413
HGNC:HGNC:30268 ChiTaRS:RAB37 EMBL:AK127073 IPI:IPI00788648
SMR:A8MSP2 STRING:A8MSP2 Ensembl:ENST00000340415 UCSC:uc002jld.2
Uniprot:A8MSP2
Length = 182
Score = 133 (51.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG-SPGEGLNMMDKTLLVRGARISYS 135
D ++ V K L+GD +GKTS L ++ + G S G+ +K + V G R+
Sbjct: 16 DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIG 194
IW+ G + + +D+ A+L ++D+T++ + ++ W + + Q + I ++G
Sbjct: 76 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135
Query: 195 TKFD 198
K D
Sbjct: 136 NKAD 139
>UNIPROTKB|A6QR46 [details] [associations]
symbol:RAB6B "Ras-related protein Rab-6B" species:9913 "Bos
taurus" [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0015031 GO:GO:0016023 PROSITE:PS51419
eggNOG:COG1100 HOGENOM:HOG000233968 GeneTree:ENSGT00600000084341
OrthoDB:EOG4NP74D EMBL:BC150111 IPI:IPI00690578
RefSeq:NP_001094599.1 UniGene:Bt.65157 ProteinModelPortal:A6QR46
SMR:A6QR46 PRIDE:A6QR46 Ensembl:ENSBTAT00000001199 GeneID:526526
KEGG:bta:526526 CTD:51560 InParanoid:A6QR46 KO:K07894 OMA:ETSKEGM
NextBio:20874388 Uniprot:A6QR46
Length = 208
Score = 143 (55.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/165 (21%), Positives = 76/165 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q TI + AK L+ +SA NV ++ + + + L
Sbjct: 131 ADKRQITI-EEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>UNIPROTKB|Q9NRW1 [details] [associations]
symbol:RAB6B "Ras-related protein Rab-6B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded
vesicle" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=NAS]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=NAS] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0006184 "GTP catabolic process" evidence=NAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 EMBL:CH471052 GO:GO:0003924 GO:GO:0016023
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0006890 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4NP74D CTD:51560 KO:K07894
OMA:ETSKEGM EMBL:AF166492 EMBL:AF498940 EMBL:BT007263 EMBL:AK312378
EMBL:BC002510 EMBL:U66623 IPI:IPI00016891 RefSeq:NP_057661.3
UniGene:Hs.707804 PDB:2E9S PDB:2FE4 PDB:2FFQ PDBsum:2E9S
PDBsum:2FE4 PDBsum:2FFQ ProteinModelPortal:Q9NRW1 SMR:Q9NRW1
IntAct:Q9NRW1 STRING:Q9NRW1 PhosphoSite:Q9NRW1 DMDM:13633595
PaxDb:Q9NRW1 PRIDE:Q9NRW1 DNASU:51560 Ensembl:ENST00000285208
Ensembl:ENST00000543906 GeneID:51560 KEGG:hsa:51560 UCSC:uc003epy.3
GeneCards:GC03M133543 HGNC:HGNC:14902 HPA:CAB017713
neXtProt:NX_Q9NRW1 PharmGKB:PA34147 InParanoid:Q9NRW1
PhylomeDB:Q9NRW1 ChiTaRS:RAB6B EvolutionaryTrace:Q9NRW1
GenomeRNAi:51560 NextBio:55358 ArrayExpress:Q9NRW1 Bgee:Q9NRW1
Genevestigator:Q9NRW1 GermOnline:ENSG00000154917 Uniprot:Q9NRW1
Length = 208
Score = 143 (55.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/165 (21%), Positives = 76/165 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q TI + AK L+ +SA NV ++ + + + L
Sbjct: 131 ADKRQITI-EEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>MGI|MGI:107283 [details] [associations]
symbol:Rab6b "RAB6B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:107283
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0016192 GO:GO:0015031 GO:GO:0016023 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4NP74D CTD:51560 KO:K07894 OMA:ETSKEGM ChiTaRS:RAB6B
EMBL:AK035893 EMBL:BC060618 IPI:IPI00378145 RefSeq:NP_776142.1
UniGene:Mm.490252 ProteinModelPortal:P61294 SMR:P61294
IntAct:P61294 STRING:P61294 PhosphoSite:P61294 PaxDb:P61294
PRIDE:P61294 Ensembl:ENSMUST00000035155 GeneID:270192
KEGG:mmu:270192 InParanoid:P61294 NextBio:393297 Bgee:P61294
CleanEx:MM_RAB6B Genevestigator:P61294
GermOnline:ENSMUSG00000032549 Uniprot:P61294
Length = 208
Score = 143 (55.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/165 (21%), Positives = 76/165 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 75 FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD----L 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q TI + AK L+ +SA NV ++ + + + L
Sbjct: 131 ADKRQITI-EEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
>ZFIN|ZDB-GENE-040704-16 [details] [associations]
symbol:zgc:91909 "zgc:91909" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040704-16 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 GeneTree:ENSGT00700000104345
OMA:WETEMEL EMBL:CR855300 EMBL:BC072717 IPI:IPI00509134
RefSeq:NP_001002178.1 UniGene:Dr.32183 SMR:Q6GQM5 STRING:Q6GQM5
Ensembl:ENSDART00000004065 Ensembl:ENSDART00000124225 GeneID:431725
KEGG:dre:431725 InParanoid:Q6GQM5 NextBio:20830961 Uniprot:Q6GQM5
Length = 204
Score = 142 (55.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 44/170 (25%), Positives = 83/170 (48%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV ++ G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + ++D+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFI 244
K D +D + +A+A+ ++ N +F +SA INV + + I
Sbjct: 126 KID------LDNRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTI 169
>UNIPROTKB|Q58DS9 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN EMBL:BT021518 EMBL:BC118226 IPI:IPI00694198
RefSeq:NP_001029915.1 UniGene:Bt.5451 ProteinModelPortal:Q58DS9
SMR:Q58DS9 STRING:Q58DS9 PRIDE:Q58DS9 Ensembl:ENSBTAT00000015581
GeneID:613749 KEGG:bta:613749 CTD:5878 InParanoid:Q58DS9 KO:K07889
NextBio:20898747 Uniprot:Q58DS9
Length = 216
Score = 144 (55.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 40/172 (23%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + ++ Q +A+AYA+ N+ LF +SA +NVN+I I KL
Sbjct: 137 DLASKRAVEFQ-----EAQAYAED-NSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|F2Z560 [details] [associations]
symbol:RAB5C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN CTD:5878
KO:K07889 EMBL:CU856598 RefSeq:NP_001231183.1 UniGene:Ssc.19390
UniGene:Ssc.82797 ProteinModelPortal:F2Z560 SMR:F2Z560 PRIDE:F2Z560
Ensembl:ENSSSCT00000018954 GeneID:100523862 KEGG:ssc:100523862
ArrayExpress:F2Z560 Uniprot:F2Z560
Length = 216
Score = 144 (55.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 40/172 (23%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + ++ Q +A+AYA+ N+ LF +SA +NVN+I I KL
Sbjct: 137 DLASKRAVEFQ-----EAQAYAED-NSLLFMETSAKTAMNVNEIFMAIAKKL 182
>ZFIN|ZDB-GENE-040801-185 [details] [associations]
symbol:rab18b "RAB18B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007420
"brain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040801-185 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0007420 GO:GO:0015031 GO:GO:0009790
PROSITE:PS51419 eggNOG:COG1100 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OrthoDB:EOG4VT5Z6
OMA:FAKRHRT EMBL:BC076054 IPI:IPI00506933 RefSeq:NP_001003449.1
UniGene:Dr.79683 ProteinModelPortal:Q6DHC1 SMR:Q6DHC1 STRING:Q6DHC1
PRIDE:Q6DHC1 Ensembl:ENSDART00000042737 GeneID:445055
KEGG:dre:445055 CTD:445055 InParanoid:Q6DHC1 NextBio:20831818
Bgee:Q6DHC1 Uniprot:Q6DHC1
Length = 205
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 30/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ + G R +
Sbjct: 1 MDDDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQT-AIPIII 193
IW+ G + + P + + ++ ++D+T R T + W + C + + +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYCTRNDLVKMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>UNIPROTKB|F1NXY6 [details] [associations]
symbol:RAB33A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 OMA:TWIEECN EMBL:AADN02013152
IPI:IPI00813699 ProteinModelPortal:F1NXY6
Ensembl:ENSGALT00000040577 Uniprot:F1NXY6
Length = 219
Score = 144 (55.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 45/175 (25%), Positives = 84/175 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +KT+ + G RI +W+ G +
Sbjct: 20 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGERIKVQVWDTAGQER 79
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAI-PII----IGTKFD 198
+ + ++ A++F++D+T + ++ W ++ CN A+ P++ +G K D
Sbjct: 80 FRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIEE---CNGHAVSPLVPKVLVGNKCD 136
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
D IQ+P +S A +A A N LF +SA + NV I + +L
Sbjct: 137 LKDLIQVP-------SSMALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 184
>UNIPROTKB|O95716 [details] [associations]
symbol:RAB3D "Ras-related protein Rab-3D" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0030133
"transport vesicle" evidence=IEA] [GO:0042588 "zymogen granule"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 EMBL:AF081353 EMBL:AF498933 EMBL:BC016471
IPI:IPI00032808 RefSeq:NP_004274.1 UniGene:Hs.731663 PDB:2GF9
PDBsum:2GF9 ProteinModelPortal:O95716 SMR:O95716 IntAct:O95716
STRING:O95716 PhosphoSite:O95716 PaxDb:O95716 PRIDE:O95716
DNASU:9545 Ensembl:ENST00000222120 GeneID:9545 KEGG:hsa:9545
UCSC:uc002mqx.3 CTD:9545 GeneCards:GC19M011435 HGNC:HGNC:9779
HPA:CAB018067 MIM:604350 neXtProt:NX_O95716 PharmGKB:PA34134
InParanoid:O95716 KO:K07884 OMA:GKGPTLG PhylomeDB:O95716
EvolutionaryTrace:O95716 GenomeRNAi:9545 NextBio:35795 Bgee:O95716
CleanEx:HS_RAB3D Genevestigator:O95716 GermOnline:ENSG00000105514
Uniprot:O95716
Length = 219
Score = 144 (55.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/159 (26%), Positives = 73/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L M+D+ ++ + +V W Q + + A I++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCD--LE- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
D + A R A L F +SA NINV ++ +
Sbjct: 141 --DERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFE 177
>MGI|MGI:97844 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IDA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IDA] [GO:0030133 "transport vesicle" evidence=ISO]
[GO:0042588 "zymogen granule" evidence=IDA] [GO:0051020 "GTPase
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97844 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
OrthoDB:EOG4TB4C6 CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:M89777
EMBL:AF263365 EMBL:AF263366 EMBL:BC010779 EMBL:BC020010
IPI:IPI00116688 PIR:A45384 RefSeq:NP_114080.2 UniGene:Mm.260157
ProteinModelPortal:P35276 SMR:P35276 IntAct:P35276 STRING:P35276
PhosphoSite:P35276 PaxDb:P35276 PRIDE:P35276
Ensembl:ENSMUST00000115351 Ensembl:ENSMUST00000122211 GeneID:19340
KEGG:mmu:19340 InParanoid:P35276 NextBio:296343 Bgee:P35276
CleanEx:MM_RAB3D Genevestigator:P35276
GermOnline:ENSMUSG00000019066 Uniprot:P35276
Length = 219
Score = 144 (55.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/159 (26%), Positives = 73/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L M+D+ ++ + +V W Q + + A I++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCD--LE- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
D + A R A L F +SA NINV ++ +
Sbjct: 141 --DERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFE 177
>UNIPROTKB|F5GZB1 [details] [associations]
symbol:RAB6A "Ras-related protein Rab-6A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP002770
EMBL:AP002993 HGNC:HGNC:9786 ChiTaRS:RAB6A IPI:IPI01009243
ProteinModelPortal:F5GZB1 SMR:F5GZB1 Ensembl:ENST00000539750
ArrayExpress:F5GZB1 Bgee:F5GZB1 Uniprot:F5GZB1
Length = 142
Score = 132 (51.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 26/115 (22%), Positives = 57/115 (49%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+ G +
Sbjct: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD 198
+ +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 75 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD 129
>DICTYBASE|DDB_G0277101 [details] [associations]
symbol:rab11C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0277101
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 GenomeReviews:CM000151_GR GO:GO:0000331
PROSITE:PS51419 EMBL:AAFI02000019 eggNOG:COG1100 KO:K07976
HSSP:Q15907 OMA:GRIHEVV RefSeq:XP_642956.1
ProteinModelPortal:Q550H6 SMR:Q550H6 MINT:MINT-6947891 PRIDE:Q550H6
EnsemblProtists:DDB0229395 GeneID:8620825 KEGG:ddi:DDB_G0277101
Uniprot:Q550H6
Length = 224
Score = 144 (55.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 33/168 (19%), Positives = 86/168 (51%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD +GK++ L ++ +E + G++ K++ + I+ W+ G +
Sbjct: 12 KIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ + ++D+TS+ + K+V RW + R+ Q + +++G K D +++
Sbjct: 72 FRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSD--LEM 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++ +A+A+A++ + +SA + NVN+ + + ++ +
Sbjct: 130 SREVP---TKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHL 174
>UNIPROTKB|F1NST3 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN
IPI:IPI00600808 EMBL:AADN02068703 EMBL:AADN02068704
Ensembl:ENSGALT00000005312 Ensembl:ENSGALT00000039914
Uniprot:F1NST3
Length = 216
Score = 143 (55.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 41/172 (23%), Positives = 80/172 (46%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GKTS + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKTSLVLRFVKGQFPEFQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q A+ YA N+ LF +SA +NVN+I I KL
Sbjct: 137 DLATKRAVDFQ-----DAQTYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|P51148 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 EMBL:CH471152 GO:GO:0003924 GO:GO:0030100
GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AC105024 EMBL:AC099811
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:U18420 EMBL:U11293 EMBL:AF141304 EMBL:AF498938 EMBL:AK310234
EMBL:CR541901 EMBL:BT019484 EMBL:AC003104 EMBL:BC106039
EMBL:BC114439 IPI:IPI00016339 IPI:IPI01021644 PIR:I38703
RefSeq:NP_001238968.1 RefSeq:NP_004574.2 RefSeq:NP_958842.1
UniGene:Hs.650382 ProteinModelPortal:P51148 SMR:P51148
IntAct:P51148 STRING:P51148 PhosphoSite:P51148 DMDM:38258923
PaxDb:P51148 PeptideAtlas:P51148 PRIDE:P51148 DNASU:5878
Ensembl:ENST00000346213 Ensembl:ENST00000393860
Ensembl:ENST00000547517 Ensembl:ENST00000565751 GeneID:5878
KEGG:hsa:5878 UCSC:uc002hyz.3 GeneCards:GC17M040276 HGNC:HGNC:9785
HPA:HPA003426 MIM:604037 neXtProt:NX_P51148 PharmGKB:PA34145
InParanoid:P51148 PhylomeDB:P51148 GenomeRNAi:5878 NextBio:22840
ArrayExpress:P51148 Bgee:P51148 CleanEx:HS_RAB5C
Genevestigator:P51148 GermOnline:ENSG00000108774 Uniprot:P51148
Length = 216
Score = 143 (55.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 45/188 (23%), Positives = 88/188 (46%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKLFDIPWTLE 256
D + ++ Q +A+AYA N+ LF +SA +NVN+I I KL P
Sbjct: 137 DLASKRAVEFQ-----EAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL---PKNEP 187
Query: 257 RNLTIGEP 264
+N T G P
Sbjct: 188 QNAT-GAP 194
>UNIPROTKB|Q5R7L7 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0005811 GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003
HOVERGEN:HBG009351 HSSP:P35278 GeneTree:ENSGT00640000091139
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:CR860097 RefSeq:NP_001127529.1
UniGene:Pab.17478 ProteinModelPortal:Q5R7L7 SMR:Q5R7L7 PRIDE:Q5R7L7
Ensembl:ENSPPYT00000009823 GeneID:100174605 KEGG:pon:100174605
InParanoid:Q5R7L7 Uniprot:Q5R7L7
Length = 216
Score = 143 (55.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 45/188 (23%), Positives = 88/188 (46%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKLFDIPWTLE 256
D + ++ Q +A+AYA N+ LF +SA +NVN+I I KL P
Sbjct: 137 DLASKRAVEFQ-----EAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL---PKNEP 187
Query: 257 RNLTIGEP 264
+N T G P
Sbjct: 188 QNAT-GAP 194
>DICTYBASE|DDB_G0290783 [details] [associations]
symbol:rabG2 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0290783 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000154_GR PROSITE:PS51419 eggNOG:COG1100
EMBL:AAFI02000171 KO:K07976 HSSP:P62820 ProtClustDB:CLSZ2429520
RefSeq:XP_635528.1 ProteinModelPortal:Q54FL2 GeneID:8627825
KEGG:ddi:DDB_G0290783 Uniprot:Q54FL2
Length = 197
Score = 139 (54.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/166 (21%), Positives = 78/166 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+GD +GKTS L ++ + ++ ++ +K +++ G + IW+ G +
Sbjct: 8 KILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQER 67
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQL 203
+ + + +L +D+T + T +V W Q+ ++ + +++G K D ++
Sbjct: 68 FRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCD--LE- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
D + S AR YA +L +SA +NV + + +++
Sbjct: 125 --DRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIY 168
>ZFIN|ZDB-GENE-040426-2686 [details] [associations]
symbol:zgc:63637 "zgc:63637" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040426-2686 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 KO:K07893
HSSP:P10114 EMBL:BC058059 IPI:IPI00832042 RefSeq:NP_998530.1
UniGene:Dr.117991 ProteinModelPortal:Q6PEH6 SMR:Q6PEH6
STRING:Q6PEH6 GeneID:406674 KEGG:dre:406674 NextBio:20818202
ArrayExpress:Q6PEH6 Uniprot:Q6PEH6
Length = 211
Score = 142 (55.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/181 (21%), Positives = 83/181 (45%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
D L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 12 DPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 71
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKF 197
G + + +P +DS + ++D+T+ + + +W R + I +++G K
Sbjct: 72 TAGQERFRSLIPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKT 131
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D L Q ++ + A A+ L +SA NV ++ + + A L + T E+
Sbjct: 132 D----LGDKRQVSVEA-AEKKARELGVMYIETSAKAGYNVKQLFRRVAAALPGMDSTPEK 186
Query: 258 N 258
+
Sbjct: 187 S 187
>ZFIN|ZDB-GENE-040718-250 [details] [associations]
symbol:rab30 "RAB30, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-250 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:27314 KO:K07917 OMA:DYKFLFK
OrthoDB:EOG43XV4G EMBL:CR538726 EMBL:BC076437 IPI:IPI00506069
RefSeq:NP_001002750.1 UniGene:Dr.32093 SMR:Q6DGB3
Ensembl:ENSDART00000055220 GeneID:437023 KEGG:dre:437023
InParanoid:Q6DGB3 NextBio:20831438 Uniprot:Q6DGB3
Length = 201
Score = 140 (54.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 37/173 (21%), Positives = 79/173 (45%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D L KI L+G+ +GKT + ++ G G++ M KT+ ++G ++ I
Sbjct: 3 DYDYL--FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIKGVKVKLQI 60
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGT 195
W+ G + + + + A++ +D+T + + + W ++ + N + I++G
Sbjct: 61 WDTAGQERFRSITQSYYRSANALILTYDITCEDSFRCLPEWLREIEQYANNQVVTILVGN 120
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
K D D + + +A +A + + +SA + NV K+ + +L
Sbjct: 121 KID-----LADKREVLRQRAEEFADSQSMLYLETSAKESDNVEKLFLDLACEL 168
>UNIPROTKB|E2RP90 [details] [associations]
symbol:RAB43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 KO:K07930 OMA:LIGDCGT
EMBL:AAEX03012024 RefSeq:XP_003639768.1 ProteinModelPortal:E2RP90
Ensembl:ENSCAFT00000006967 GeneID:100856686 KEGG:cfa:100856686
Uniprot:E2RP90
Length = 212
Score = 142 (55.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 85 KISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GKT ++++ G E+ GS G++ KTL ++G R+ IW+ G
Sbjct: 20 KLVLVGDASVGKTCVVQRFKTGAFSERQGST-IGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD 198
+ + + + + +D+T R + SV W + RK + ++IG K D
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134
>UNIPROTKB|Q86YS6 [details] [associations]
symbol:RAB43 "Ras-related protein Rab-43" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0007030 "Golgi
organization" evidence=IMP] [GO:0035526 "retrograde transport,
plasma membrane to Golgi" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0006184 "GTP
catabolic process" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 EMBL:CH471052 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 GermOnline:ENSG00000172780
HOGENOM:HOG000233968 OrthoDB:EOG4WQ13N CleanEx:HS_RAB41
EMBL:AY166852 EMBL:AK291014 EMBL:BC062319 IPI:IPI00329441
RefSeq:NP_001191812.1 RefSeq:NP_001191813.1 RefSeq:NP_001191814.1
RefSeq:NP_001191815.1 RefSeq:NP_940892.1 UniGene:Hs.381132
UniGene:Hs.546542 PDB:2HUP PDBsum:2HUP ProteinModelPortal:Q86YS6
SMR:Q86YS6 STRING:Q86YS6 PhosphoSite:Q86YS6 DMDM:74727944
PaxDb:Q86YS6 PRIDE:Q86YS6 Ensembl:ENST00000315150
Ensembl:ENST00000393304 Ensembl:ENST00000393305
Ensembl:ENST00000393307 Ensembl:ENST00000393308 GeneID:339122
KEGG:hsa:339122 UCSC:uc003eln.2 CTD:339122 GeneCards:GC03M128806
HGNC:HGNC:19983 HPA:HPA046840 neXtProt:NX_Q86YS6
PharmGKB:PA134968262 InParanoid:Q86YS6 KO:K07930 OMA:LIGDCGT
EvolutionaryTrace:Q86YS6 GenomeRNAi:339122 NextBio:97235
ArrayExpress:Q86YS6 Bgee:Q86YS6 CleanEx:HS_RAB43
Genevestigator:Q86YS6 Uniprot:Q86YS6
Length = 212
Score = 142 (55.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 32/116 (27%), Positives = 58/116 (50%)
Query: 85 KISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GKT ++++ G E+ GS G++ KTL ++G R+ IW+ G
Sbjct: 20 KLVLVGDASVGKTCVVQRFKTGAFSERQGST-IGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD 198
+ + + + + +D+T R + SV W + RK + ++IG K D
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134
>UNIPROTKB|E1C8J9 [details] [associations]
symbol:RAB3B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA] [GO:0030141 "secretory granule" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0008021
GO:GO:0030141 GO:GO:0017157 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:5865 KO:K06108 OMA:PPSQQNC
EMBL:AADN02012575 IPI:IPI00598636 RefSeq:XP_422470.2
UniGene:Gga.9853 Ensembl:ENSGALT00000017197 GeneID:424636
KEGG:gga:424636 NextBio:20826946 Uniprot:E1C8J9
Length = 219
Score = 143 (55.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G +
Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+TS + +V W Q + + A I++G K D +
Sbjct: 84 YRTITTAYYRGAMGFILMYDITSEDSFNAVQDWATQIKTYSWDNAQVILVGNKCDMEDER 143
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I L+ + + A L F +SA NINV ++ +
Sbjct: 144 IIPLE-----KGKHLADQLGFDYFEASAKENINVRQVFE 177
>TAIR|locus:2145392 [details] [associations]
symbol:RABH1e "RAB GTPase homolog H1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0016192
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL360334
HOGENOM:HOG000233968 OMA:PNIVIMN HSSP:Q26000
ProtClustDB:CLSN2683734 EMBL:BT020541 EMBL:BT024829 IPI:IPI00543211
PIR:T50814 RefSeq:NP_196588.3 UniGene:At.50443
ProteinModelPortal:Q9LFT9 SMR:Q9LFT9 PaxDb:Q9LFT9 PRIDE:Q9LFT9
EnsemblPlants:AT5G10260.1 GeneID:830890 KEGG:ath:AT5G10260
TAIR:At5g10260 InParanoid:Q9LFT9 PhylomeDB:Q9LFT9
Genevestigator:Q9LFT9 Uniprot:Q9LFT9
Length = 207
Score = 141 (54.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/169 (21%), Positives = 78/169 (46%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ +R + + +W + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ ++AR Y T SA N+ + + I A L
Sbjct: 127 VDKRQVSIEEG-DNKARDYGVIFIET----SAKAGFNIKPLFRKIAAAL 170
>ZFIN|ZDB-GENE-040801-2 [details] [associations]
symbol:rab3aa "RAB3A, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-2 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 KO:K07882 EMBL:CR769774 EMBL:BC075980
IPI:IPI00484138 RefSeq:NP_001003419.1 UniGene:Dr.83119 SMR:Q6DHJ2
Ensembl:ENSDART00000078838 GeneID:445024 KEGG:dre:445024 CTD:445024
InParanoid:Q6DHJ2 OMA:DIICERM OrthoDB:EOG42NJ17 NextBio:20831785
Uniprot:Q6DHJ2
Length = 220
Score = 143 (55.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 44/183 (24%), Positives = 83/183 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KVLIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A +++G K D
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEDSFNAVQDWSTQIKTYSWDNAQVLLVGNKCD----- 138
Query: 204 PIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT-LERNLTI 261
++ + +A Q R ++ L F +SA NINV + + +L D+ + NL
Sbjct: 139 -MEDERVVAGQRGRQLSEQLGFEFFEASAKDNINVKQTFE----RLVDVICERMSENLES 193
Query: 262 GEP 264
+P
Sbjct: 194 ADP 196
>TAIR|locus:2161685 [details] [associations]
symbol:RAN4 "ras-related nuclear protein 4" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR002041 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00627
PROSITE:PS51418 SMART:SM00176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886
GO:GO:0007264 GO:GO:0003924 GO:GO:0006913 eggNOG:COG1100
EMBL:AB010071 HOGENOM:HOG000216664 KO:K07936 ProtClustDB:PLN03071
IPI:IPI00540839 RefSeq:NP_200319.1 UniGene:At.55559 HSSP:Q9CZA2
ProteinModelPortal:Q9FLQ3 SMR:Q9FLQ3 PaxDb:Q9FLQ3 PRIDE:Q9FLQ3
EnsemblPlants:AT5G55080.1 GeneID:835599 KEGG:ath:AT5G55080
TAIR:At5g55080 InParanoid:Q9FLQ3 OMA:RRVCKNI PhylomeDB:Q9FLQ3
Genevestigator:Q9FLQ3 Uniprot:Q9FLQ3
Length = 222
Score = 143 (55.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L K+ ++GD GKT+FL++++ E E P G+++ +I + W+
Sbjct: 10 DLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDT 69
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIII-GTKF 197
G K + MFD+T+R T ++ RWY+ R+ C IPI++ G K
Sbjct: 70 AGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKN--IPIVLCGNKV 127
Query: 198 D 198
D
Sbjct: 128 D 128
>DICTYBASE|DDB_G0291738 [details] [associations]
symbol:rabG1 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0291738 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000155_GR GO:GO:0015031 EMBL:AAFI02000182
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:Q15907
RefSeq:XP_629970.1 ProteinModelPortal:Q54E92 PRIDE:Q54E92
EnsemblProtists:DDB0229406 GeneID:8628300 KEGG:ddi:DDB_G0291738
OMA:FQETSVN ProtClustDB:CLSZ2429520 Uniprot:Q54E92
Length = 196
Score = 138 (53.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 39/167 (23%), Positives = 77/167 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPG-EGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GKTS L ++ Q S ++ +K + + G + IW+ G
Sbjct: 8 KILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + + +L +D+T + T +V W Q+ ++ + +++G K D ++
Sbjct: 68 RFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCD--LE 125
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
D + AS A+ YA L +SAT +NV + + +++
Sbjct: 126 ---DRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIY 169
>UNIPROTKB|P51147 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0042470 "melanosome" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:Z27110 PIR:S65933
RefSeq:NP_001003261.1 UniGene:Cfa.3802 ProteinModelPortal:P51147
SMR:P51147 STRING:P51147 PRIDE:P51147 Ensembl:ENSCAFT00000024768
GeneID:403941 KEGG:cfa:403941 InParanoid:P51147 NextBio:20817431
Uniprot:P51147
Length = 216
Score = 142 (55.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 40/172 (23%), Positives = 82/172 (47%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + ++ Q +A+AYA N+ LF +SA +NVN+I I KL
Sbjct: 137 DLASKRAVEFQ-----EAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 182
>MGI|MGI:105306 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0006810 "transport" evidence=IEA] [GO:0007032
"endosome organization" evidence=IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0030100 "regulation of
endocytosis" evidence=IDA] [GO:0030139 "endocytic vesicle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105306 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0015031
GO:GO:0003924 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:BC023027 EMBL:BC027378 EMBL:BC029678 EMBL:M79312
IPI:IPI00224518 PIR:JH0641 RefSeq:NP_077776.2 UniGene:Mm.29829
PDB:1HUQ PDB:1Z07 PDB:1Z0D PDBsum:1HUQ PDBsum:1Z07 PDBsum:1Z0D
ProteinModelPortal:P35278 SMR:P35278 IntAct:P35278 STRING:P35278
PhosphoSite:P35278 PaxDb:P35278 PRIDE:P35278
Ensembl:ENSMUST00000107364 GeneID:19345 KEGG:mmu:19345
EvolutionaryTrace:P35278 NextBio:296361 Bgee:P35278
CleanEx:MM_RAB5C Genevestigator:P35278
GermOnline:ENSMUSG00000019173 Uniprot:P35278
Length = 216
Score = 142 (55.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 40/172 (23%), Positives = 82/172 (47%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + ++ Q +A+AYA N+ LF +SA +NVN+I I KL
Sbjct: 137 DLASKRAVEFQ-----EAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 182
>ZFIN|ZDB-GENE-030131-139 [details] [associations]
symbol:rab5aa "RAB5A, member RAS oncogene family,
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-030131-139
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
GeneTree:ENSGT00640000091139 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:RAVDFQV EMBL:BX950869 EMBL:BC047803 EMBL:BC063966
IPI:IPI00484834 RefSeq:NP_958893.1 UniGene:Dr.7401 SMR:Q7ZUW5
STRING:Q7ZUW5 Ensembl:ENSDART00000034124 Ensembl:ENSDART00000129730
GeneID:337737 KEGG:dre:337737 CTD:337737 InParanoid:Q7ZUW5
NextBio:20812391 Uniprot:Q7ZUW5
Length = 216
Score = 142 (55.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 42/175 (24%), Positives = 84/175 (48%)
Query: 77 DADNLVA-LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+A N + K+ LLG+ +GK+S + ++V + + G + +TL + + +
Sbjct: 14 NAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFE 73
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIG 194
IW+ G + P+ + + A + ++D+T+ + W ++ R+ + + + G
Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSG 133
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
K D + +D Q A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 134 NKADLANKRAVDFQ-----DAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 182
>TAIR|locus:2140079 [details] [associations]
symbol:RABA4B "RAB GTPase homolog A4B" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019900 "kinase binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0032456 "endocytic recycling"
evidence=IDA] [GO:0031901 "early endosome membrane" evidence=IDA]
[GO:0032588 "trans-Golgi network membrane" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0031901 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588
GO:GO:0015031 PROSITE:PS51419 EMBL:AL161596 GO:GO:0032456
eggNOG:COG1100 EMBL:AL035708 KO:K07976 HOGENOM:HOG000233968
HSSP:P07560 ProtClustDB:CLSN2685897 EMBL:U46926 EMBL:AY072448
EMBL:AY128914 EMBL:AY088624 IPI:IPI00516291 PIR:T06105
RefSeq:NP_195709.1 UniGene:At.1649 UniGene:At.48966
ProteinModelPortal:Q9SMQ6 SMR:Q9SMQ6 STRING:Q9SMQ6 PaxDb:Q9SMQ6
PRIDE:Q9SMQ6 EnsemblPlants:AT4G39990.1 GeneID:830160
KEGG:ath:AT4G39990 TAIR:At4g39990 InParanoid:Q9SMQ6 OMA:FEHIPRW
PhylomeDB:Q9SMQ6 Genevestigator:Q9SMQ6 Uniprot:Q9SMQ6
Length = 224
Score = 143 (55.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 40/169 (23%), Positives = 76/169 (44%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK+ L ++ DE G+ +TL + I IW+ G +
Sbjct: 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DFI 201
+ + ++ + ++D+T R T + + RW ++ R ++ + I+IG K D D
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQR 138
Query: 202 QLPIDLQWTIASQARAY---AKALNATLFFSSATYNINVNKILKFITAK 247
+P + A + + ALNAT +S +N + +I + K
Sbjct: 139 AVPTEDAKEFAEKEGLFFLETSALNATNVENS--FNTLMTQIYNTVNKK 185
>TAIR|locus:2102777 [details] [associations]
symbol:RABA2c "RAB GTPase homolog A2C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0009504
"cell plate" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0010008 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504
EMBL:AL096859 KO:K07976 HOGENOM:HOG000233968 EMBL:Y08904
EMBL:AY065380 EMBL:AY096545 EMBL:AY087450 IPI:IPI00527142
PIR:T12965 RefSeq:NP_190267.1 UniGene:At.109 UniGene:At.73032
ProteinModelPortal:Q96283 SMR:Q96283 PaxDb:Q96283 PRIDE:Q96283
EnsemblPlants:AT3G46830.1 GeneID:823836 KEGG:ath:AT3G46830
TAIR:At3g46830 InParanoid:Q96283 OMA:PQGTTIN PhylomeDB:Q96283
ProtClustDB:PLN03110 Genevestigator:Q96283 GermOnline:AT3G46830
Uniprot:Q96283
Length = 217
Score = 142 (55.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/181 (23%), Positives = 82/181 (45%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
+HR +D + KI L+GD +GK++ L ++ +E G+ +T V G
Sbjct: 2 THR-VDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
I IW+ G + + + ++ L ++D+T R T +V+RW ++ R + I I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 192 IIGTKFDDFIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++ D L ++A + ++ A+ + +SA NV K + I +++
Sbjct: 121 MMAGNKSDLNHLR-----SVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYH 175
Query: 251 I 251
I
Sbjct: 176 I 176
>UNIPROTKB|Q9UBK7 [details] [associations]
symbol:RABL2A "Rab-like protein 2A" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL078621
EMBL:AF095350 EMBL:AF095351 IPI:IPI00002644 IPI:IPI00221207
IPI:IPI00917072 RefSeq:NP_009013.1 RefSeq:NP_038198.1
UniGene:Hs.446425 ProteinModelPortal:Q9UBK7 SMR:Q9UBK7
STRING:Q9UBK7 PhosphoSite:Q9UBK7 DMDM:12643870 PRIDE:Q9UBK7
DNASU:11159 Ensembl:ENST00000393165 Ensembl:ENST00000393166
Ensembl:ENST00000393167 Ensembl:ENST00000409875 GeneID:11159
KEGG:hsa:11159 UCSC:uc002tkn.4 CTD:11159 GeneCards:GC02P114384
HGNC:HGNC:9799 MIM:605412 neXtProt:NX_Q9UBK7 PharmGKB:PA34159
HOGENOM:HOG000233971 HOVERGEN:HBG106536 KO:K07931 OMA:CTVEASE
OrthoDB:EOG4J1194 PhylomeDB:Q9UBK7 GenomeRNAi:11159 NextBio:42445
ArrayExpress:Q9UBK7 Bgee:Q9UBK7 CleanEx:HS_RABL2A
Genevestigator:Q9UBK7 GermOnline:ENSG00000144134 Uniprot:Q9UBK7
Length = 228
Score = 143 (55.4 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 66 RPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL 125
+PS ++ DAD+ V KI LGD +GK+ +E+++ D + L + T
Sbjct: 7 KPSELDQGKY-DADDNV--KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTA 63
Query: 126 LVRGARISYSIWEVTGDAKAQD-HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC 184
V G I W+ G + Q H K + A + +FD+ + T +++ WY + R+
Sbjct: 64 TVDGKTILVDFWDTAGQERFQSMHASYYHK-AHACIMVFDIQRKVTYRNLSTWYTELREF 122
Query: 185 NQTAIP-IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
+ IP I++ K DD + ++ +AK + L+F SA NV K+
Sbjct: 123 -RPEIPCIVVANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKL 169
>ZFIN|ZDB-GENE-050809-136 [details] [associations]
symbol:rab6ba "RAB6B, member RAS oncogene family a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050809-136 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00600000084341 EMBL:AL935299 IPI:IPI00998642
ProteinModelPortal:F1QKF5 Ensembl:ENSDART00000127126 Bgee:F1QKF5
Uniprot:F1QKF5
Length = 258
Score = 145 (56.1 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 37/165 (22%), Positives = 76/165 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 65 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 124
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+ + + +W R + I +++G K D L
Sbjct: 125 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD----L 180
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q TI + AK L+ +SA NV ++ + + A L
Sbjct: 181 ADKRQITI-EEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAAL 224
>ZFIN|ZDB-GENE-030515-1 [details] [associations]
symbol:rab40c "RAB40c, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030515-1 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
eggNOG:COG1100 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR CTD:57799
OMA:ELCCRTI EMBL:BX470132 EMBL:BC115347 IPI:IPI00506775
RefSeq:NP_001035438.1 UniGene:Dr.77273 Ensembl:ENSDART00000087047
GeneID:678600 KEGG:dre:678600 InParanoid:Q1RLP4 NextBio:20902420
Uniprot:Q1RLP4
Length = 279
Score = 146 (56.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/155 (25%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK L+ E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNGMTFFEVSPLCNFNV 163
>UNIPROTKB|F1P5F8 [details] [associations]
symbol:RAB40C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0016567 GO:GO:0005622 GeneTree:ENSGT00700000104049
OMA:ELCCRTI EMBL:AADN02049451 EMBL:AADN02049452 IPI:IPI00955555
Ensembl:ENSGALT00000003084 Uniprot:F1P5F8
Length = 281
Score = 146 (56.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGASESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>UNIPROTKB|Q5JT25 [details] [associations]
symbol:RAB41 "Ras-related protein Rab-41" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:AL357752 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BC117239 IPI:IPI00232898 IPI:IPI00929731
RefSeq:NP_001027898.2 UniGene:Hs.276327 ProteinModelPortal:Q5JT25
SMR:Q5JT25 STRING:Q5JT25 PhosphoSite:Q5JT25 DMDM:229462781
PaxDb:Q5JT25 PRIDE:Q5JT25 DNASU:347517 Ensembl:ENST00000276066
Ensembl:ENST00000374473 GeneID:347517 KEGG:hsa:347517
UCSC:uc010nkv.3 CTD:347517 GeneCards:GC0XP069502 HGNC:HGNC:18293
HPA:HPA001510 neXtProt:NX_Q5JT25 PharmGKB:PA34140 InParanoid:Q5JT25
KO:K07896 OMA:FEESGNR GenomeRNAi:347517 NextBio:99173
ArrayExpress:Q5JT25 Bgee:Q5JT25 CleanEx:HS_RAB41
Genevestigator:Q5JT25 Uniprot:Q5JT25
Length = 222
Score = 142 (55.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 37/170 (21%), Positives = 77/170 (45%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L K+ LG+ +GKTS + +++ + G++ + KT+ + + +W+
Sbjct: 28 SLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDT 87
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD 198
G + +P +DS + ++D+T+ + K +W + R + + +++G K D
Sbjct: 88 AGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKID 147
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q T A Q ++ LN +SA NV K+ + + + L
Sbjct: 148 ----LDNKRQVT-AEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASAL 192
>UNIPROTKB|O88565 [details] [associations]
symbol:Rab5a "Protein Rab5a" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620936 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003
GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351 HOGENOM:HOG000233968
HSSP:P20339 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M OMA:EPQNTGA
EMBL:CH474184 EMBL:AF072935 EMBL:BC161848 IPI:IPI00210733
RefSeq:NP_073183.1 UniGene:Rn.44477 SMR:O88565 IntAct:O88565
MINT:MINT-4584734 STRING:O88565 Ensembl:ENSRNOT00000016813
GeneID:64633 KEGG:rno:64633 InParanoid:O88565 NextBio:613600
Genevestigator:O88565 Uniprot:O88565
Length = 215
Score = 141 (54.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>TAIR|locus:2015576 [details] [associations]
symbol:RABA1b "RAB GTPase homolog A1B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005774 GO:GO:0006886
GO:GO:0007264 PROSITE:PS51419 EMBL:AC051629 GO:GO:0042538
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 EMBL:L18883
EMBL:BT006406 EMBL:AK227865 EMBL:AY086881 IPI:IPI00537039
PIR:S59942 RefSeq:NP_173136.1 UniGene:At.324
ProteinModelPortal:Q39222 SMR:Q39222 STRING:Q39222 PaxDb:Q39222
PRIDE:Q39222 EnsemblPlants:AT1G16920.1 GeneID:838263
KEGG:ath:AT1G16920 TAIR:At1g16920 InParanoid:Q39222 OMA:QIYRITS
PhylomeDB:Q39222 ProtClustDB:CLSN2914413 Genevestigator:Q39222
GermOnline:AT1G16920 Uniprot:Q39222
Length = 216
Score = 141 (54.7 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 41/188 (21%), Positives = 85/188 (45%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D L K+ L+GD +GK++ L ++ +E G+ +TL V G + I
Sbjct: 9 DYDYL--FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQI 66
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGT 195
W+ G + + + ++ L ++D+T R T ++V RW ++ + + + +++G
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L + + ++YA+ + +SA NV + +++ I T
Sbjct: 127 KSDLRHLLAVPTE-----DGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI--TS 179
Query: 256 ERNLTIGE 263
++ + GE
Sbjct: 180 KKQVEAGE 187
>UNIPROTKB|F1S5W6 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 OMA:GKGPTLG EMBL:CU855518
Ensembl:ENSSSCT00000014878 Uniprot:F1S5W6
Length = 227
Score = 142 (55.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 32 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 91
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L M+D+ ++ + +V W Q + + A I++G K D ++
Sbjct: 92 YRTITTAYYRGAMGFLLMYDIANQESFAAVQDWSTQIKTYSWDNAQVILVGNKCD--LE- 148
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
D + + R A L F +SA NINV ++ +
Sbjct: 149 --DERVVPTEEGRRLADDLGFEFFEASAKENINVKQVFE 185
>RGD|1565300 [details] [associations]
symbol:Rab43 "RAB43, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO;ISS] [GO:0006184 "GTP catabolic process"
evidence=ISO;ISS] [GO:0007030 "Golgi organization"
evidence=ISO;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0035526 "retrograde transport, plasma membrane to
Golgi" evidence=ISO;ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0090382 "phagosome maturation"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1565300 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 OrthoDB:EOG4WQ13N CTD:339122 KO:K07930
OMA:LIGDCGT EMBL:AY593256 IPI:IPI00204737 RefSeq:NP_001019502.1
UniGene:Rn.141443 ProteinModelPortal:Q53B90 SMR:Q53B90 PRIDE:Q53B90
Ensembl:ENSRNOT00000013299 GeneID:500249 KEGG:rno:500249
UCSC:RGD:1565300 InParanoid:Q53B90 NextBio:705573
Genevestigator:Q53B90 GermOnline:ENSRNOG00000037768 Uniprot:Q53B90
Length = 210
Score = 140 (54.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 85 KISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GKT ++++ G + GS G++ KTL ++G R+ IW+ G
Sbjct: 18 KLVLVGDASVGKTCVVQRFKTGAFSARQGST-IGVDFTMKTLEIQGKRVKLQIWDTAGQE 76
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + + + +D++ R T SV W + RK + ++IG K D D
Sbjct: 77 RFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADL 136
Query: 201 IQLPI 205
++P+
Sbjct: 137 REVPL 141
>UNIPROTKB|E1BNX1 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042588 "zymogen granule" evidence=IEA] [GO:0018125
"peptidyl-cysteine methylation" evidence=IEA] [GO:0017157
"regulation of exocytosis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0017157 GO:GO:0042588 GO:GO:0018125
GeneTree:ENSGT00690000101942 CTD:9545 KO:K07884 OMA:GKGPTLG
EMBL:DAAA02019486 IPI:IPI00709014 RefSeq:NP_001178304.1
UniGene:Bt.20052 Ensembl:ENSBTAT00000002783 GeneID:100139105
KEGG:bta:100139105 NextBio:20790194 Uniprot:E1BNX1
Length = 219
Score = 141 (54.7 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L M+D+ ++ + +V W Q + + A I++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYSWDNAQVILVGNKCD--LE- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
D + + R A L F +SA NINV ++ +
Sbjct: 141 --DERVVPTEEGRRLADDLGFEFFEASAKENINVKQVFE 177
>UNIPROTKB|Q9UNT1 [details] [associations]
symbol:RABL2B "Rab-like protein 2B" species:9606 "Homo
sapiens" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233971
HOVERGEN:HBG106536 EMBL:AF095352 EMBL:BT020037 EMBL:AC002055
EMBL:BC014879 EMBL:BC024281 EMBL:BC075856 IPI:IPI00009415
IPI:IPI00220774 IPI:IPI00853263 RefSeq:NP_001003789.1
RefSeq:NP_001124391.1 RefSeq:NP_001124392.1 RefSeq:NP_001124393.1
RefSeq:NP_001124394.1 RefSeq:NP_001124395.1 RefSeq:NP_009012.1
UniGene:Hs.584862 ProteinModelPortal:Q9UNT1 SMR:Q9UNT1
IntAct:Q9UNT1 STRING:Q9UNT1 PhosphoSite:Q9UNT1 DMDM:12229940
PRIDE:Q9UNT1 DNASU:11158 Ensembl:ENST00000354869
Ensembl:ENST00000395593 Ensembl:ENST00000395595
Ensembl:ENST00000395598 Ensembl:ENST00000435118 GeneID:11158
KEGG:hsa:11158 UCSC:uc003bnk.1 UCSC:uc003bnl.1 UCSC:uc003bnm.1
CTD:11158 GeneCards:GC22M051205 HGNC:HGNC:9800 MIM:605413
neXtProt:NX_Q9UNT1 PharmGKB:PA34160 KO:K07932 OMA:RKITYKN
GenomeRNAi:11158 NextBio:42439 ArrayExpress:Q9UNT1 Bgee:Q9UNT1
CleanEx:HS_RABL2B Genevestigator:Q9UNT1 GermOnline:ENSG00000079974
Uniprot:Q9UNT1
Length = 228
Score = 142 (55.0 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 47/177 (26%), Positives = 81/177 (45%)
Query: 66 RPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL 125
+PS ++ DAD+ V KI LGD +GK+ +E+++ D + L + T
Sbjct: 7 KPSELDQGKY-DADDNV--KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTA 63
Query: 126 LVRGARISYSIWEVTGDAKAQD-HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC 184
V G I W+ G + Q H K + A + +FD+ + T +++ WY + R+
Sbjct: 64 TVDGRTILVDFWDTAGQERFQSMHASYYHK-AHACIMVFDVQRKVTYRNLSTWYTELREF 122
Query: 185 NQTAIP-IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
+ IP I++ K DD + ++ +AK + L+F SA NV K+
Sbjct: 123 -RPEIPCIVVANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVVKL 169
>WB|WBGene00004269 [details] [associations]
symbol:rab-6.1 species:6239 "Caenorhabditis elegans"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031985 "Golgi cisterna" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0060473 "cortical
granule" evidence=IDA] [GO:0060471 "cortical granule exocytosis"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0060473
GO:GO:0031985 EMBL:Z11505 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00600000084341 PIR:S31127 RefSeq:NP_498993.1
ProteinModelPortal:P34213 SMR:P34213 STRING:P34213 PaxDb:P34213
PRIDE:P34213 EnsemblMetazoa:F59B2.7.1 EnsemblMetazoa:F59B2.7.2
GeneID:176275 KEGG:cel:CELE_F59B2.7 UCSC:F59B2.7.1 CTD:176275
WormBase:F59B2.7 InParanoid:P34213 OMA:PNIVIMN NextBio:891878
ArrayExpress:P34213 GO:GO:0060471 Uniprot:P34213
Length = 205
Score = 139 (54.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 37/171 (21%), Positives = 73/171 (42%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 9 LKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK---CNQTAIPIIIGTKF 197
G + + +P +DS + ++D+T+ + +W R C+ I +++G K
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCD--VIIVLVGNKT 126
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D D + A+ LN +SA NV ++ + I L
Sbjct: 127 D-----LADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIATAL 172
>UNIPROTKB|F1MX39 [details] [associations]
symbol:RAB42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00690000101664 CTD:115273 KO:K07929
EMBL:DAAA02006334 IPI:IPI00706837 RefSeq:XP_002685729.1
RefSeq:XP_592115.2 UniGene:Bt.87211 ProteinModelPortal:F1MX39
Ensembl:ENSBTAT00000028686 GeneID:514286 KEGG:bta:514286
OMA:RFRCITR NextBio:20871263 Uniprot:F1MX39
Length = 220
Score = 141 (54.7 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 45/164 (27%), Positives = 80/164 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYV-G------DEKEQGGSPGEGLNMMDKTL-LVRGARISYSI 136
+I+LLGD +GKTS L Y+ G E E +P G+ +T+ L G R+ +
Sbjct: 11 RIALLGDAAVGKTSLLRCYMRGAPGIPEPELELESAPTVGVEFYTRTVQLQAGPRVKLQL 70
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ--ARKCNQTAIPIIIG 194
W+ G + + ++ + +L +FD+T+R + + ++ W+Q+ A + AI ++IG
Sbjct: 71 WDTAGQERFRCITRSFYRNVVGVLLVFDVTNRKSFEHILDWHQEVMATQGPDKAIFLLIG 130
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
K D +Q + +A A +L +SA N NV+
Sbjct: 131 HKSD--LQ---SARCVSTQEAEELAASLGIGFMETSAKSNCNVD 169
>SGD|S000005037 [details] [associations]
symbol:YPT53 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003924
"GTPase activity" evidence=ISS;IMP;IDA] [GO:0005770 "late endosome"
evidence=IMP] [GO:0006623 "protein targeting to vacuole"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000005037 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0006897
EMBL:BK006947 GO:GO:0005770 PROSITE:PS51419 EMBL:DQ115393
GO:GO:0006623 EMBL:X85811 eggNOG:COG1100 EMBL:AF458969
EMBL:AF458970 EMBL:AF458971 EMBL:AF458972 EMBL:AF458975
EMBL:AF458976 EMBL:AF458977 EMBL:AF458978 EMBL:AF458979
EMBL:AF458980 EMBL:AF458981 RefSeq:NP_014314.3 GeneID:855639
KEGG:sce:YNL085W RefSeq:NP_014306.3 GeneID:855631 KEGG:sce:YNL093W
KO:K07976 HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139
OrthoDB:EOG47WRXZ EMBL:X76175 EMBL:Z71369 EMBL:AY558420 PIR:S45168
ProteinModelPortal:P36019 SMR:P36019 DIP:DIP-2025N IntAct:P36019
MINT:MINT-384797 STRING:P36019 PaxDb:P36019 PRIDE:P36019
EnsemblFungi:YNL093W CYGD:YNL093w OMA:SIVVRFA NextBio:979842
ArrayExpress:P36019 Genevestigator:P36019 GermOnline:YNL093W
Uniprot:P36019
Length = 220
Score = 141 (54.7 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 30/126 (23%), Positives = 61/126 (48%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
+H A + +K+ LLG+ +GK+S + ++V D+ ++ P G + K + G I
Sbjct: 3 KHTAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPII 192
+ IW+ G + P+ +++ A L +FD+T+ + W ++ K + +
Sbjct: 63 FEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIAL 122
Query: 193 IGTKFD 198
+G K D
Sbjct: 123 VGNKMD 128
>UNIPROTKB|A2VDR1 [details] [associations]
symbol:RAB40C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 GO:GO:0005622
eggNOG:COG1100 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR CTD:57799
OMA:ELCCRTI EMBL:DAAA02057278 EMBL:BC133361 IPI:IPI00705044
RefSeq:NP_001075014.1 UniGene:Bt.4759 Ensembl:ENSBTAT00000010364
GeneID:618031 KEGG:bta:618031 InParanoid:A2VDR1 NextBio:20900959
Uniprot:A2VDR1
Length = 281
Score = 145 (56.1 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>UNIPROTKB|Q96S21 [details] [associations]
symbol:RAB40C "Ras-related protein Rab-40C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0019003
"GDP binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001496 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449
PROSITE:PS50225 SMART:SM00175 SMART:SM00253 SMART:SM00969
UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0016567
EMBL:CH471112 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AE006464 HOVERGEN:HBG009351 EMBL:Z98883 HOGENOM:HOG000233967
KO:K07928 OrthoDB:EOG45QHDR EMBL:Z84479 IPI:IPI00045478
RefSeq:NP_001166134.1 RefSeq:NP_001166135.1 RefSeq:NP_001166136.1
RefSeq:NP_066991.3 UniGene:Hs.459630 ProteinModelPortal:Q96S21
SMR:Q96S21 IntAct:Q96S21 MINT:MINT-1419142 STRING:Q96S21
PhosphoSite:Q96S21 DMDM:27734457 PaxDb:Q96S21 PRIDE:Q96S21
Ensembl:ENST00000248139 Ensembl:ENST00000535977
Ensembl:ENST00000538492 Ensembl:ENST00000539661 GeneID:57799
KEGG:hsa:57799 UCSC:uc002chr.3 CTD:57799 GeneCards:GC16P000672
HGNC:HGNC:18285 neXtProt:NX_Q96S21 PharmGKB:PA34139
InParanoid:Q96S21 OMA:ELCCRTI PhylomeDB:Q96S21 GenomeRNAi:57799
NextBio:64743 ArrayExpress:Q96S21 Bgee:Q96S21 CleanEx:HS_RAB40C
Genevestigator:Q96S21 GermOnline:ENSG00000197562 Uniprot:Q96S21
Length = 281
Score = 145 (56.1 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>MGI|MGI:2183454 [details] [associations]
symbol:Rab40c "Rab40c, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2183454 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0048471 GO:GO:0007264
GO:GO:0015031 GO:GO:0016567 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR CTD:57799
OMA:ELCCRTI EMBL:AF422144 EMBL:BC027008 IPI:IPI00128577
RefSeq:NP_631893.1 UniGene:Mm.328872 ProteinModelPortal:Q8VHQ4
SMR:Q8VHQ4 PhosphoSite:Q8VHQ4 PaxDb:Q8VHQ4 PRIDE:Q8VHQ4
Ensembl:ENSMUST00000026826 Ensembl:ENSMUST00000167626
Ensembl:ENSMUST00000179998 GeneID:224624 KEGG:mmu:224624
InParanoid:Q8VHQ4 ChiTaRS:RAB40C NextBio:377259 Bgee:Q8VHQ4
CleanEx:MM_RAB40C Genevestigator:Q8VHQ4
GermOnline:ENSMUSG00000025730 Uniprot:Q8VHQ4
Length = 281
Score = 145 (56.1 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>RGD|727914 [details] [associations]
symbol:Rab40c "Rab40c, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001881 "receptor recycling" evidence=NAS]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0042552
"myelination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 RGD:727914 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0016567 GO:GO:0042552 GO:GO:0001881 EMBL:CH473948
GO:GO:0019003 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104049
KO:K07928 CTD:57799 OMA:ELCCRTI EMBL:AC126071 EMBL:AY190240
IPI:IPI00199978 RefSeq:NP_872616.1 UniGene:Rn.2496 SMR:Q6Y2E6
IntAct:Q6Y2E6 Ensembl:ENSRNOT00000027266 GeneID:359728
KEGG:rno:359728 UCSC:RGD:727914 InParanoid:Q6Y2E6 NextBio:672705
Genevestigator:Q6Y2E6 Uniprot:Q6Y2E6
Length = 281
Score = 145 (56.1 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + IL ++D+T+R + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDE-HAPGVPRILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QARAYA+ T F S N NV
Sbjct: 130 LAFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>FB|FBgn0039966 [details] [associations]
symbol:Rab21 "Rab21" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
[GO:0036313 "phosphatidylinositol 3-kinase catalytic subunit
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0005769 "early endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AE014298
CTD:23011 OMA:FQKVKSW GeneTree:ENSGT00640000091439 UniGene:Dm.11159
GeneID:3355163 KEGG:dme:Dmel_CG17515 FlyBase:FBgn0039966
GenomeRNAi:3355163 NextBio:850940 RefSeq:NP_001036321.2
ProteinModelPortal:Q7PLE9 SMR:Q7PLE9 PRIDE:Q7PLE9
EnsemblMetazoa:FBtr0299903 UCSC:CG17515-RC InParanoid:Q7PLE9
PhylomeDB:Q7PLE9 ArrayExpress:Q7PLE9 Bgee:Q7PLE9 Uniprot:Q7PLE9
Length = 222
Score = 141 (54.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 45/169 (26%), Positives = 79/169 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDE-KEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K LLG+ +GKTS + +Y+ D Q S + + K L G R +IW+ G
Sbjct: 15 KAVLLGEGCVGKTSLVLRYMEDRFNAQHLSTLQASFVSRKMSLEDGRRAQLNIWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ P+ + S L ++D+T R + + V W ++ R+ T I II+G K D
Sbjct: 75 RFHALGPIYYRGSDGALLVYDITDRDSFQKVKSWVRELRQMRGTEIALIIVGNKTD---- 130
Query: 203 LPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++ Q + +A YA+ + A +SA N V ++ + +T + +
Sbjct: 131 --LEEQRAVTHDEALQYARTVGAQYVETSAKENEGVAELFELLTQLMLE 177
>UNIPROTKB|E1C0F3 [details] [associations]
symbol:RAB7A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0007174 "epidermal growth factor
catabolic process" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0045022 "early endosome to late endosome transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003 CTD:7879
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH GO:GO:0007174
EMBL:AADN02014058 EMBL:AADN02014057 IPI:IPI00601244
RefSeq:XP_003642026.1 RefSeq:XP_414359.1 UniGene:Gga.5872
PRIDE:E1C0F3 Ensembl:ENSGALT00000009495 GeneID:416016
KEGG:gga:416016 NextBio:20819533 Uniprot:E1C0F3
Length = 207
Score = 139 (54.0 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L T +QA Y+K N F +SA INV + + I +
Sbjct: 126 KID----LENRQVTTKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 256 ERNLTIGEPI 265
E EPI
Sbjct: 181 ELYNEFPEPI 190
>UNIPROTKB|Q0IIG7 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9913 "Bos
taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122651
IPI:IPI00693824 RefSeq:NP_001069654.1 UniGene:Bt.24043
ProteinModelPortal:Q0IIG7 SMR:Q0IIG7 STRING:Q0IIG7 PRIDE:Q0IIG7
GeneID:539764 KEGG:bta:539764 CTD:5868 InParanoid:Q0IIG7 KO:K07887
OrthoDB:EOG4Z0B6M NextBio:20878203 Uniprot:Q0IIG7
Length = 215
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P18066 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9615
"Canis lupus familiaris" [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0051489
"regulation of filopodium assembly" evidence=IEA] [GO:0045921
"positive regulation of exocytosis" evidence=IEA] [GO:0045121
"membrane raft" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0005811 GO:GO:0015629 GO:GO:0015031
GO:GO:0003924 GO:GO:0006897 GO:GO:0045121 GO:GO:0030139
GO:GO:0001726 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 GO:GO:0045921 GO:GO:2000286 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 CTD:5868
KO:K07887 OrthoDB:EOG4Z0B6M EMBL:M35520 PIR:A30413
RefSeq:NP_001003317.1 UniGene:Cfa.40292 ProteinModelPortal:P18066
IntAct:P18066 STRING:P18066 PRIDE:P18066 Ensembl:ENSCAFT00000009363
GeneID:404008 KEGG:cfa:404008 InParanoid:P18066 OMA:EPQNTGA
NextBio:20817495 Uniprot:P18066
Length = 215
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P20339 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030139
"endocytic vesicle" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0001726 "ruffle" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006897
"endocytosis" evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0045921 "positive regulation of exocytosis" evidence=IMP]
[GO:0051489 "regulation of filopodium assembly" evidence=IDA]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0010008 "endosome
membrane" evidence=TAS] [GO:2000286 "receptor internalization
involved in canonical Wnt receptor signaling pathway" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_604 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0007399 GO:GO:0030154 GO:GO:0031901
EMBL:CH471055 GO:GO:0015629
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0015031
GO:GO:0007596 GO:GO:0003924 GO:GO:0045121 GO:GO:0010008
GO:GO:0030139 GO:GO:0001726 PROSITE:PS51419 GO:GO:0005769
eggNOG:COG1100 GO:GO:0051489 GO:GO:0019003 GO:GO:0045921
GO:GO:2000286 HOVERGEN:HBG009351 PDB:3MJH PDBsum:3MJH
HOGENOM:HOG000233968 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA EMBL:M28215 EMBL:AF464088 EMBL:AF498936 EMBL:AK312618
EMBL:CR536492 EMBL:BC001267 EMBL:BC018288 IPI:IPI00023510
PIR:F34323 RefSeq:NP_004153.2 UniGene:Hs.475663 PDB:1N6H PDB:1N6I
PDB:1N6K PDB:1N6L PDB:1N6N PDB:1N6O PDB:1N6P PDB:1N6R PDB:1R2Q
PDB:1TU3 PDB:1TU4 PDBsum:1N6H PDBsum:1N6I PDBsum:1N6K PDBsum:1N6L
PDBsum:1N6N PDBsum:1N6O PDBsum:1N6P PDBsum:1N6R PDBsum:1R2Q
PDBsum:1TU3 PDBsum:1TU4 ProteinModelPortal:P20339 SMR:P20339
DIP:DIP-380N IntAct:P20339 MINT:MINT-209361 STRING:P20339
PhosphoSite:P20339 DMDM:1346958 PaxDb:P20339 PRIDE:P20339
DNASU:5868 Ensembl:ENST00000273047 GeneID:5868 KEGG:hsa:5868
UCSC:uc003cbn.3 GeneCards:GC03P019963 HGNC:HGNC:9783 HPA:CAB004567
MIM:179512 neXtProt:NX_P20339 PharmGKB:PA34143 InParanoid:P20339
PhylomeDB:P20339 ChiTaRS:RAB5A EvolutionaryTrace:P20339
GenomeRNAi:5868 NextBio:22790 ArrayExpress:P20339 Bgee:P20339
CleanEx:HS_RAB5A Genevestigator:P20339 GermOnline:ENSG00000144566
Uniprot:P20339
Length = 215
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|Q06AU6 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9823 "Sus
scrofa" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0042470 "melanosome"
evidence=IEA] [GO:0031901 "early endosome membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
CTD:5868 KO:K07887 EMBL:DQ917629 RefSeq:NP_001116652.1
UniGene:Ssc.53977 ProteinModelPortal:Q06AU6 SMR:Q06AU6
GeneID:100144499 KEGG:ssc:100144499 Uniprot:Q06AU6
Length = 215
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|P61271 [details] [associations]
symbol:RAB5A "Ras-related protein Rab-5A" species:9541
"Macaca fascicularis" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0006897 "endocytosis" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0001726 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
EMBL:AB062987 ProteinModelPortal:P61271 PRIDE:P61271 Uniprot:P61271
Length = 215
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>MGI|MGI:105926 [details] [associations]
symbol:Rab5a "RAB5A, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001726 "ruffle" evidence=IDA] [GO:0003924
"GTPase activity" evidence=ISO;IDA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005768 "endosome"
evidence=IDA] [GO:0005769 "early endosome" evidence=ISO;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO;IDA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0019001 "guanyl nucleotide binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0045921 "positive
regulation of exocytosis" evidence=ISO] [GO:0051489 "regulation of
filopodium assembly" evidence=ISO] [GO:2000286 "receptor
internalization involved in canonical Wnt receptor signaling
pathway" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105926 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0007399 GO:GO:0030154
GO:GO:0031901 GO:GO:0015629 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0045121 GO:GO:0030139 GO:GO:0001726
PROSITE:PS51419 GO:GO:0005769 eggNOG:COG1100 GO:GO:0051489
GO:GO:0019003 EMBL:CH466559 GO:GO:0045921 GO:GO:2000286
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00640000091139 CTD:5868 KO:K07887 OrthoDB:EOG4Z0B6M
OMA:EPQNTGA ChiTaRS:RAB5A EMBL:AB232593 EMBL:AK002631 EMBL:AK008198
EMBL:AK010495 EMBL:AK081999 EMBL:AK150296 EMBL:AK150346
EMBL:AK150405 EMBL:AK151066 EMBL:AK153131 EMBL:AK159706
EMBL:BC004842 EMBL:BC034370 EMBL:BC096481 IPI:IPI00132410
RefSeq:NP_080163.1 UniGene:Mm.329123 ProteinModelPortal:Q9CQD1
SMR:Q9CQD1 IntAct:Q9CQD1 STRING:Q9CQD1 PhosphoSite:Q9CQD1
PaxDb:Q9CQD1 PRIDE:Q9CQD1 Ensembl:ENSMUST00000017975 GeneID:271457
KEGG:mmu:271457 InParanoid:Q9CQD1 NextBio:393462 Bgee:Q9CQD1
CleanEx:MM_RAB5A Genevestigator:Q9CQD1
GermOnline:ENSMUSG00000017831 Uniprot:Q9CQD1
Length = 215
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 39/172 (22%), Positives = 83/172 (48%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA ++NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 181
>UNIPROTKB|E1BJA0 [details] [associations]
symbol:LOC784703 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104044 CTD:9363 KO:K07919
OMA:TWIEECN EMBL:DAAA02067454 IPI:IPI00697472 RefSeq:NP_001179922.1
RefSeq:XP_001251480.1 UniGene:Bt.11337 PRIDE:E1BJA0
Ensembl:ENSBTAT00000030324 GeneID:510101 GeneID:784703
KEGG:bta:510101 KEGG:bta:784703 NextBio:20869278 Uniprot:E1BJA0
Length = 237
Score = 142 (55.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +KT+ + G +I +W+ G +
Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQER 97
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-----IIIGTKFD 198
+ + ++ A++F++D+T + ++ W Q+ CN A+P +++G K D
Sbjct: 98 FRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE---CNGHAVPPLVPKVLVGNKCD 154
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
+ IQ+P +L A +A A N LF +SA + NV I + +L
Sbjct: 155 LREQIQVPSNL-------ALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 202
>UNIPROTKB|E2R535 [details] [associations]
symbol:RAB33A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:9363 KO:K07919 OMA:TWIEECN
EMBL:AAEX03026905 RefSeq:XP_854340.1 ProteinModelPortal:E2R535
SMR:E2R535 PRIDE:E2R535 Ensembl:ENSCAFT00000029768 GeneID:612988
KEGG:cfa:612988 NextBio:20898443 Uniprot:E2R535
Length = 237
Score = 142 (55.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +KT+ + G +I +W+ G +
Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQER 97
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-----IIIGTKFD 198
+ + ++ A++F++D+T + ++ W Q+ CN A+P +++G K D
Sbjct: 98 FRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE---CNGHAVPPLVPKVLVGNKCD 154
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
+ IQ+P +L A +A A N LF +SA + NV I + +L
Sbjct: 155 LREQIQVPSNL-------ALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 202
>UNIPROTKB|Q14088 [details] [associations]
symbol:RAB33A "Ras-related protein Rab-33A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 PROSITE:PS51419 EMBL:AL139234 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:D14889 EMBL:AF498959
EMBL:BT007038 EMBL:BC001157 EMBL:BC009996 IPI:IPI00028517
PIR:S35058 RefSeq:NP_004785.1 UniGene:Hs.654356
ProteinModelPortal:Q14088 SMR:Q14088 IntAct:Q14088
MINT:MINT-1455156 STRING:Q14088 PhosphoSite:Q14088 DMDM:2500071
PRIDE:Q14088 DNASU:9363 Ensembl:ENST00000257017 GeneID:9363
KEGG:hsa:9363 UCSC:uc004evl.3 CTD:9363 GeneCards:GC0XP129305
HGNC:HGNC:9773 MIM:300333 neXtProt:NX_Q14088 PharmGKB:PA34124
InParanoid:Q14088 KO:K07919 OMA:TWIEECN OrthoDB:EOG4WH8MS
PhylomeDB:Q14088 GenomeRNAi:9363 NextBio:35063 Bgee:Q14088
CleanEx:HS_RAB33A Genevestigator:Q14088 GermOnline:ENSG00000134594
Uniprot:Q14088
Length = 237
Score = 142 (55.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +KT+ + G +I +W+ G +
Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQER 97
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-----IIIGTKFD 198
+ + ++ A++F++D+T + ++ W Q+ CN A+P +++G K D
Sbjct: 98 FRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE---CNGHAVPPLVPKVLVGNKCD 154
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
+ IQ+P +L A +A A N LF +SA + NV I + +L
Sbjct: 155 LREQIQVPSNL-------ALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 202
>UNIPROTKB|Q06AU8 [details] [associations]
symbol:RAB33A "PR33A" species:9823 "Sus scrofa" [GO:0005525
"GTP binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 CTD:9363 KO:K07919 OMA:TWIEECN
OrthoDB:EOG4WH8MS EMBL:FP015904 EMBL:CU929735 EMBL:DQ917627
RefSeq:NP_001116649.1 UniGene:Ssc.29589 SMR:Q06AU8
Ensembl:ENSSSCT00000013839 GeneID:100144495 KEGG:ssc:100144495
Uniprot:Q06AU8
Length = 237
Score = 142 (55.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +KT+ + G +I +W+ G +
Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQER 97
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-----IIIGTKFD 198
+ + ++ A++F++D+T + ++ W Q+ CN A+P +++G K D
Sbjct: 98 FRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE---CNGHAVPPLVPKVLVGNKCD 154
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
+ IQ+P +L A +A A N LF +SA + NV I + +L
Sbjct: 155 LREQIQVPSNL-------ALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 202
>MGI|MGI:109493 [details] [associations]
symbol:Rab33a "RAB33A, member of RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:109493
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:9363 KO:K07919 OrthoDB:EOG4WH8MS
EMBL:D83279 EMBL:D83277 IPI:IPI00131060 RefSeq:NP_035358.1
UniGene:Mm.2015 ProteinModelPortal:P97950 SMR:P97950 STRING:P97950
PhosphoSite:P97950 PaxDb:P97950 PRIDE:P97950
Ensembl:ENSMUST00000033430 GeneID:19337 KEGG:mmu:19337
InParanoid:P97950 NextBio:296331 Bgee:P97950 CleanEx:MM_RAB33A
Genevestigator:P97950 GermOnline:ENSMUSG00000031104 Uniprot:P97950
Length = 237
Score = 142 (55.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +KT+ + G +I +W+ G +
Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQER 97
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-----IIIGTKFD 198
+ + ++ A++F++D+T + ++ W Q+ CN A+P +++G K D
Sbjct: 98 FRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE---CNGHAVPPLVPKVLVGNKCD 154
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
+ IQ+P +L A +A A N LF +SA + NV I + +L
Sbjct: 155 LREQIQVPSNL-------ALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 202
>RGD|1563280 [details] [associations]
symbol:Rab33a "RAB33A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1563280 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104044 CTD:9363 KO:K07919 OMA:TWIEECN
OrthoDB:EOG4WH8MS EMBL:CH473991 IPI:IPI00370133
RefSeq:NP_001101727.1 UniGene:Rn.28066 Ensembl:ENSRNOT00000008868
GeneID:317580 KEGG:rno:317580 UCSC:RGD:1563280 NextBio:671938
Uniprot:D3ZCU8
Length = 237
Score = 142 (55.0 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/175 (25%), Positives = 84/175 (48%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +KT+ + G +I +W+ G +
Sbjct: 38 KIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQER 97
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-----IIIGTKFD 198
+ + ++ A++F++D+T + ++ W Q+ CN A+P +++G K D
Sbjct: 98 FRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQE---CNGHAVPPLVPKVLVGNKCD 154
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
+ IQ+P +L A +A A N LF +SA + NV I + +L
Sbjct: 155 LREQIQVPSNL-------ALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRL 202
>UNIPROTKB|Q5ZJN2 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0072659 "protein localization to plasma
membrane" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:AJ720402 IPI:IPI00585570 RefSeq:NP_001005827.1
UniGene:Gga.5322 ProteinModelPortal:Q5ZJN2 SMR:Q5ZJN2 STRING:Q5ZJN2
PRIDE:Q5ZJN2 Ensembl:ENSGALT00000012312 GeneID:415544
KEGG:gga:415544 InParanoid:Q5ZJN2 NextBio:20819128 Uniprot:Q5ZJN2
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|Q98932 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P20339
OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889 EMBL:Y07811 IPI:IPI00600808
RefSeq:NP_989856.1 UniGene:Gga.2500 ProteinModelPortal:Q98932
SMR:Q98932 STRING:Q98932 PRIDE:Q98932 GeneID:395197 KEGG:gga:395197
InParanoid:Q98932 NextBio:20815287 Uniprot:Q98932
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 40/172 (23%), Positives = 80/172 (46%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 17 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ T W ++ R+ + + + G K
Sbjct: 77 TAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKA 136
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q A+ YA N+ LF +SA +NVN+I I KL
Sbjct: 137 DLATKRAVDFQ-----DAQTYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 182
>UNIPROTKB|F2Z4D5 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
GO:GO:0031175 GO:GO:0032154 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 IPI:IPI00695221 UniGene:Bt.44630
EMBL:DAAA02027871 ProteinModelPortal:F2Z4D5 SMR:F2Z4D5 PRIDE:F2Z4D5
Ensembl:ENSBTAT00000025235 Uniprot:F2Z4D5
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|P62490 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0031175
"neuron projection development" evidence=ISS] [GO:0032154 "cleavage
furrow" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X56388 PIR:E36364
RefSeq:NP_001003276.1 UniGene:Cfa.3814 UniGene:Cfa.45017
ProteinModelPortal:P62490 SMR:P62490 IntAct:P62490
MINT:MINT-4131822 STRING:P62490 PRIDE:P62490
Ensembl:ENSCAFT00000027321 GeneID:403957 KEGG:cfa:403957
InParanoid:P62490 NextBio:20817447 Uniprot:P62490
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|P62491 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030133 "transport vesicle" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0051223 "regulation of protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=NAS] [GO:0048227 "plasma membrane to endosome
transport" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0072659 "protein localization to plasma membrane"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0055037 "recycling
endosome" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0006833 "water transport" evidence=TAS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0015031 GO:GO:0003924 GO:GO:0055085
GO:GO:0019905 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0030659 GO:GO:0005802 GO:GO:0006833 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 Pathway_Interaction_DB:txa2pathway
GO:GO:0031175 EMBL:CH471082 GO:GO:0048169 GO:GO:0032154
GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
Pathway_Interaction_DB:arf6downstreampathway GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766
KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X53143 EMBL:X56740 EMBL:AF000231
EMBL:AF498946 EMBL:CR407669 EMBL:CR536493 EMBL:BT020151
EMBL:BT020154 EMBL:AK311770 EMBL:BC013348 IPI:IPI00429190
PIR:S47169 RefSeq:NP_001193765.1 RefSeq:NP_004654.1
UniGene:Hs.321541 PDB:1OIV PDB:1OIW PDB:1OIX PDB:1YZK PDB:2D7C
PDB:2GZD PDB:2GZH PDB:2HV8 PDBsum:1OIV PDBsum:1OIW PDBsum:1OIX
PDBsum:1YZK PDBsum:2D7C PDBsum:2GZD PDBsum:2GZH PDBsum:2HV8
ProteinModelPortal:P62491 SMR:P62491 DIP:DIP-29138N IntAct:P62491
MINT:MINT-1434585 STRING:P62491 PhosphoSite:P62491 DMDM:50402542
OGP:P62491 PaxDb:P62491 PRIDE:P62491 DNASU:8766
Ensembl:ENST00000261890 GeneID:8766 KEGG:hsa:8766 UCSC:uc002apk.3
GeneCards:GC15P066018 HGNC:HGNC:9760 HPA:CAB013097 MIM:605570
neXtProt:NX_P62491 PharmGKB:PA34101 InParanoid:P62491
PhylomeDB:P62491 EvolutionaryTrace:P62491 GenomeRNAi:8766
NextBio:32876 ArrayExpress:P62491 Bgee:P62491 CleanEx:HS_RAB11A
Genevestigator:P62491 GermOnline:ENSG00000103769 GO:GO:0048227
Uniprot:P62491
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|Q52NJ1 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9823
"Sus scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0072659 "protein
localization to plasma membrane" evidence=ISS] [GO:0031175 "neuron
projection development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:AY996814
RefSeq:NP_001026958.1 UniGene:Ssc.951 ProteinModelPortal:Q52NJ1
SMR:Q52NJ1 PRIDE:Q52NJ1 Ensembl:ENSSSCT00000024720 GeneID:595117
KEGG:ssc:595117 Uniprot:Q52NJ1
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|P62493 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9986
"Oryctolagus cuniculus" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 OrthoDB:EOG4RR6J7 EMBL:L19260 RefSeq:NP_001075720.1
UniGene:Ocu.1602 ProteinModelPortal:P62493 SMR:P62493
MINT:MINT-95772 STRING:P62493 PRIDE:P62493
Ensembl:ENSOCUT00000014754 GeneID:100009072 ChEMBL:CHEMBL1075143
Uniprot:P62493
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>UNIPROTKB|Q5R9M7 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 GO:GO:0032402 HOVERGEN:HBG009351 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 EMBL:CR859359
RefSeq:NP_001127429.1 UniGene:Pab.4950 ProteinModelPortal:Q5R9M7
SMR:Q5R9M7 PRIDE:Q5R9M7 Ensembl:ENSPPYT00000007758 GeneID:100174499
KEGG:pon:100174499 InParanoid:Q5R9M7 Uniprot:Q5R9M7
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>MGI|MGI:1858202 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0030133 "transport vesicle"
evidence=ISO] [GO:0030424 "axon" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0032154 "cleavage furrow"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=ISO;IDA]
[GO:0072659 "protein localization to plasma membrane" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1858202
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0043234 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0005802 GO:GO:0072659 PROSITE:PS51419 GO:GO:0030133
GO:GO:0031175 GO:GO:0048169 GO:GO:0032154 GO:GO:0051223
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766 KO:K07904
OrthoDB:EOG4RR6J7 EMBL:AF127669 EMBL:AK014268 EMBL:AK132072
EMBL:AK132159 EMBL:AK147122 EMBL:BC010722 IPI:IPI00323897
RefSeq:NP_059078.2 UniGene:Mm.1387 ProteinModelPortal:P62492
SMR:P62492 IntAct:P62492 STRING:P62492 PhosphoSite:P62492
PaxDb:P62492 PRIDE:P62492 Ensembl:ENSMUST00000172298 GeneID:53869
KEGG:mmu:53869 InParanoid:P62492 NextBio:310717 Bgee:P62492
CleanEx:MM_RAB11A Genevestigator:P62492
GermOnline:ENSMUSG00000004771 Uniprot:P62492
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>RGD|619762 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;IDA] [GO:0005525
"GTP binding" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005802 "trans-Golgi network" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISO] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031175
"neuron projection development" evidence=ISO;ISS] [GO:0032154
"cleavage furrow" evidence=ISO;ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0045773 "positive regulation of axon
extension" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0051223
"regulation of protein transport" evidence=IMP] [GO:0055037
"recycling endosome" evidence=ISO;IDA] [GO:0055038 "recycling
endosome membrane" evidence=IEA] [GO:0072659 "protein localization
to plasma membrane" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619762 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0043234
GO:GO:0016192 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 GO:GO:0031175 GO:GO:0048169
GO:GO:0032154 GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:M75153 EMBL:BC085727 IPI:IPI00214434 PIR:JN0056
RefSeq:NP_112414.1 UniGene:Rn.1016 ProteinModelPortal:P62494
SMR:P62494 DIP:DIP-46857N IntAct:P62494 STRING:P62494 PRIDE:P62494
Ensembl:ENSRNOT00000015598 GeneID:81830 KEGG:rno:81830
UCSC:RGD:619762 InParanoid:P62494 NextBio:615779
Genevestigator:P62494 GermOnline:ENSRNOG00000011302 Uniprot:P62494
Length = 216
Score = 140 (54.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 36/168 (21%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
>MGI|MGI:1931295 [details] [associations]
symbol:Rab27b "RAB27b, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005795 "Golgi stack" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016324 "apical plasma membrane" evidence=ISO] [GO:0017157
"regulation of exocytosis" evidence=ISO] [GO:0019003 "GDP binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030140 "trans-Golgi network transport vesicle"
evidence=ISO] [GO:0030667 "secretory granule membrane"
evidence=ISO] [GO:0032585 "multivesicular body membrane"
evidence=ISO] [GO:0042589 "zymogen granule membrane" evidence=ISO]
[GO:0045921 "positive regulation of exocytosis" evidence=ISO]
[GO:0071985 "multivesicular body sorting pathway" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1931295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0016324 GO:GO:0003924 GO:GO:0005795
GO:GO:0032585 PROSITE:PS51419 GO:GO:0030140 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 GO:GO:0042589
GO:GO:0071985 PDB:2ZET PDBsum:2ZET HOGENOM:HOG000233968
GeneTree:ENSGT00700000104288 OrthoDB:EOG4PRSRM CTD:5874 KO:K07886
OMA:QNVEKSV EMBL:AF328893 EMBL:AY010898 EMBL:BC032928
IPI:IPI00120346 RefSeq:NP_001076022.1 RefSeq:NP_085031.3
UniGene:Mm.246753 PDB:2IEY PDB:2IEZ PDB:2IF0 PDBsum:2IEY
PDBsum:2IEZ PDBsum:2IF0 ProteinModelPortal:Q99P58 SMR:Q99P58
DIP:DIP-46237N STRING:Q99P58 PhosphoSite:Q99P58 PaxDb:Q99P58
PRIDE:Q99P58 Ensembl:ENSMUST00000069749 Ensembl:ENSMUST00000117692
Ensembl:ENSMUST00000121693 GeneID:80718 KEGG:mmu:80718
InParanoid:Q99P58 ChiTaRS:RAB27B EvolutionaryTrace:Q99P58
NextBio:350069 Bgee:Q99P58 CleanEx:MM_RAB27B Genevestigator:Q99P58
GermOnline:ENSMUSG00000024511 Uniprot:Q99P58
Length = 218
Score = 140 (54.3 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 48/176 (27%), Positives = 79/176 (44%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL--VRGA---- 130
D D +K+ LGD +GKT+FL +Y ++ G++ +K ++ +GA
Sbjct: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGAS 62
Query: 131 ----RISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK--- 183
++ +W+ G + + +D++ L MFDLTS+ + +V W Q +
Sbjct: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122
Query: 184 CNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
C I ++IG K D LP D + QAR A+ F +SA NV K
Sbjct: 123 CENPDI-VLIGNKAD----LP-DQREVNERQARELAEKYGIPYFETSAATGQNVEK 172
>RGD|620924 [details] [associations]
symbol:Rab3d "RAB3D, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA;ISO] [GO:0018125 "peptidyl-cysteine methylation"
evidence=IEA;ISO] [GO:0030133 "transport vesicle" evidence=IDA]
[GO:0042588 "zymogen granule" evidence=IEA;ISO] [GO:0051020 "GTPase
binding" evidence=IPI] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620924 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0006887
PROSITE:PS51419 GO:GO:0030133 eggNOG:COG1100 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0042588 GO:GO:0018125 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 UniGene:Rn.9822
CTD:9545 KO:K07884 OMA:GKGPTLG EMBL:U90206 EMBL:BC081741
EMBL:S68808 EMBL:M83681 IPI:IPI00213685 PIR:I67631
RefSeq:NP_542147.1 ProteinModelPortal:Q63942 SMR:Q63942
IntAct:Q63942 STRING:Q63942 PhosphoSite:Q63942 PRIDE:Q63942
Ensembl:ENSRNOT00000015609 GeneID:140665 KEGG:rno:140665
UCSC:RGD:620924 InParanoid:Q63942 NextBio:620635
Genevestigator:Q63942 GermOnline:ENSRNOG00000011582 Uniprot:Q63942
Length = 219
Score = 140 (54.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L M+D+ ++ + +V W Q + + A I++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCD--LE- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
D + A + A L F +SA NINV ++ +
Sbjct: 141 --DERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFE 177
>ZFIN|ZDB-GENE-060503-464 [details] [associations]
symbol:rabl2 "RAB, member of RAS oncogene
family-like 2" species:7955 "Danio rerio" [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071
PRINTS:PR00449 ZFIN:ZDB-GENE-060503-464 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 eggNOG:COG1100 EMBL:BX571879
EMBL:CR318588 GeneTree:ENSGT00700000104228 HOGENOM:HOG000233971
HOVERGEN:HBG106536 OrthoDB:EOG4J1194 OMA:RKITYKN EMBL:BC134982
EMBL:CR788299 IPI:IPI00486388 RefSeq:NP_001038428.1
UniGene:Dr.122659 Ensembl:ENSDART00000092416 GeneID:561568
KEGG:dre:561568 CTD:68708 InParanoid:Q1L8G2 NextBio:20883989
Uniprot:Q1L8G2
Length = 219
Score = 140 (54.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D+D V KI LGD +GK+ +E+++ D L + T + G I
Sbjct: 15 DSDEQV--KIICLGDSAVGKSKLMERFLMDGYRPQQLSTYALTLYKYTTTINGQTILVDF 72
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + P S A + +FD+ + T K++ WY++ R+ + IP ++
Sbjct: 73 WDTAGQERFRSMHPSYYHKSHACVMVFDVQRKITYKNLTVWYKELREY-RPEIPCLV--- 128
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
+ ID + ++ +AK +F SA NV K+ K
Sbjct: 129 ----VANKIDADMKVTQKSFNFAKKQGLPFYFVSAADGTNVVKVFK 170
>UNIPROTKB|E1C105 [details] [associations]
symbol:RAB3C "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0008021 "synaptic
vesicle" evidence=IEA] [GO:0017157 "regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0008021 GO:GO:0017157 GeneTree:ENSGT00690000101942
EMBL:AADN02045695 EMBL:AADN02045696 EMBL:AADN02045697
EMBL:AADN02045698 EMBL:AADN02045699 EMBL:AADN02045700
EMBL:AADN02045701 EMBL:AADN02054671 EMBL:AADN02054672
EMBL:AADN02054673 EMBL:AADN02054674 EMBL:AADN02054675
EMBL:AADN02054676 EMBL:AADN02054677 IPI:IPI00599950
Ensembl:ENSGALT00000023749 OMA:SEAMSHS Uniprot:E1C105
Length = 212
Score = 139 (54.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 39/156 (25%), Positives = 72/156 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A I++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCD--ME- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
D + + + A+ L F +SA NINV +
Sbjct: 141 --DERVIFTERGKHLAEQLGFEFFETSAKDNINVKQ 174
>UNIPROTKB|E9PBQ0 [details] [associations]
symbol:RAB43 "Ras-related protein Rab-43" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AC108673
UniGene:Hs.381132 UniGene:Hs.546542 GeneID:339122 KEGG:hsa:339122
CTD:339122 HGNC:HGNC:19983 KO:K07930 GenomeRNAi:339122
NextBio:97235 IPI:IPI01013047 RefSeq:NP_001191816.1
ProteinModelPortal:E9PBQ0 SMR:E9PBQ0 PRIDE:E9PBQ0
Ensembl:ENST00000476465 UCSC:uc010hsy.2 ArrayExpress:E9PBQ0
Bgee:E9PBQ0 Uniprot:E9PBQ0
Length = 155
Score = 127 (49.8 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 85 KISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GKT ++++ G E+ GS G++ KTL ++G R+ IW+ G
Sbjct: 20 KLVLVGDASVGKTCVVQRFKTGAFSERQGST-IGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK 183
+ + + + + +D+T R + SV W + RK
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRK 118
>UNIPROTKB|Q5ZLG1 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0001654 "eye development"
evidence=ISS] [GO:0007420 "brain development" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR
OrthoDB:EOG4VT5Z6 EMBL:AJ719773 IPI:IPI00577245
RefSeq:NP_001006355.1 UniGene:Gga.42447 ProteinModelPortal:Q5ZLG1
SMR:Q5ZLG1 IntAct:Q5ZLG1 PRIDE:Q5ZLG1 Ensembl:ENSGALT00000012033
GeneID:420483 KEGG:gga:420483 CTD:22931 InParanoid:Q5ZLG1
NextBio:20823383 Uniprot:Q5ZLG1
Length = 206
Score = 138 (53.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ V G + +
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAI-PIII 193
IW+ G + + P + + ++ ++D+T R T + W + C + I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>UNIPROTKB|F1MJQ1 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045022 "early endosome to late endosome transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IEA] [GO:0007174
"epidermal growth factor catabolic process" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003
IPI:IPI00704752 UniGene:Bt.41314 GeneTree:ENSGT00700000104345
OMA:SPRDPEH GO:GO:0007174 EMBL:DAAA02054678
Ensembl:ENSBTAT00000013451 Uniprot:F1MJQ1
Length = 207
Score = 138 (53.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L T +QA Y+K N F +SA INV + + I +
Sbjct: 126 KID----LENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 256 ERNLTIGEPI 265
E EPI
Sbjct: 181 ELYNEFPEPI 190
>UNIPROTKB|Q3T0F5 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] [GO:0090383 "phagosome
acidification" evidence=ISS] [GO:0045022 "early endosome to late
endosome transport" evidence=ISS] [GO:0005770 "late endosome"
evidence=ISS] [GO:0042470 "melanosome" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC102415
IPI:IPI00704752 RefSeq:NP_001030253.1 UniGene:Bt.41314
ProteinModelPortal:Q3T0F5 SMR:Q3T0F5 STRING:Q3T0F5 PRIDE:Q3T0F5
GeneID:509970 KEGG:bta:509970 CTD:7879 InParanoid:Q3T0F5 KO:K07897
OrthoDB:EOG4QFWF4 NextBio:20869222 Uniprot:Q3T0F5
Length = 207
Score = 138 (53.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L T +QA Y+K N F +SA INV + + I +
Sbjct: 126 KID----LENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIVRNALKQETEV 180
Query: 256 ERNLTIGEPI 265
E EPI
Sbjct: 181 ELYNEFPEPI 190
>UNIPROTKB|P18067 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0090385 "phagosome-lysosome fusion" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0045022
"early endosome to late endosome transport" evidence=IMP]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IMP] [GO:0005770 "late endosome" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0005770 GO:GO:0033365 GO:GO:0008333
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 EMBL:M35522 PIR:B30413 RefSeq:NP_001003316.1
UniGene:Cfa.45048 ProteinModelPortal:P18067 SMR:P18067
STRING:P18067 PRIDE:P18067 Ensembl:ENSCAFT00000038482 GeneID:404007
KEGG:cfa:404007 GeneTree:ENSGT00700000104345 InParanoid:P18067
OMA:SPRDPEH BindingDB:P18067 NextBio:20817494 GO:GO:0007174
Uniprot:P18067
Length = 207
Score = 138 (53.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L T +QA Y+K N F +SA INV + + I +
Sbjct: 126 KID----LENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 256 ERNLTIGEPI 265
E EPI
Sbjct: 181 ELYNEFPEPI 190
>UNIPROTKB|P51149 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045453 "bone resorption"
evidence=IEA] [GO:0048365 "Rac GTPase binding" evidence=IEA]
[GO:0097208 "alveolar lamellar body" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0090385 "phagosome-lysosome fusion" evidence=IMP] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0045022 "early endosome to
late endosome transport" evidence=IMP] [GO:0015031 "protein
transport" evidence=TAS] [GO:0005770 "late endosome" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=TAS] [GO:0005764
"lysosome" evidence=IDA] [GO:0006897 "endocytosis" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0006622 "protein targeting to lysosome"
evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0007174 "epidermal growth factor catabolic
process" evidence=IMP] [GO:0006184 "GTP catabolic process"
evidence=IDA;TAS] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
Reactome:REACT_6900 GO:GO:0007264 GO:GO:0045335
Pathway_Interaction_DB:il12_2pathway GO:GO:0005765 GO:GO:0019886
EMBL:CH471052 GO:GO:0003924 GO:GO:0006897 GO:GO:0005770
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 GO:GO:0006622
eggNOG:COG1100 GO:GO:0019003 GO:GO:0090382 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:7879 KO:K07897 OrthoDB:EOG4QFWF4
OMA:SPRDPEH GO:GO:0007174 EMBL:X93499 EMBL:U44104 EMBL:AF050175
EMBL:AF498942 EMBL:AK000826 EMBL:AK290721 EMBL:BC008721
IPI:IPI00016342 PIR:JC5268 RefSeq:NP_004628.4 UniGene:Hs.741172
PDB:1T91 PDB:1YHN PDB:3LAW PDBsum:1T91 PDBsum:1YHN PDBsum:3LAW
ProteinModelPortal:P51149 SMR:P51149 DIP:DIP-39879N IntAct:P51149
MINT:MINT-4999676 STRING:P51149 PhosphoSite:P51149 DMDM:1709999
PaxDb:P51149 PeptideAtlas:P51149 PRIDE:P51149 DNASU:7879
Ensembl:ENST00000265062 GeneID:7879 KEGG:hsa:7879 UCSC:uc003eks.1
GeneCards:GC03P128444 HGNC:HGNC:9788 HPA:HPA006964 MIM:600882
MIM:602298 neXtProt:NX_P51149 Orphanet:99936 PharmGKB:PA162400619
InParanoid:P51149 PhylomeDB:P51149 ChiTaRS:RAB7A
EvolutionaryTrace:P51149 GenomeRNAi:7879 NextBio:30336
ArrayExpress:P51149 Bgee:P51149 CleanEx:HS_RAB7A
Genevestigator:P51149 GermOnline:ENSG00000075785 Uniprot:P51149
Length = 207
Score = 138 (53.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L T +QA Y+K N F +SA INV + + I +
Sbjct: 126 KID----LENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 256 ERNLTIGEPI 265
E EPI
Sbjct: 181 ELYNEFPEPI 190
>MGI|MGI:105068 [details] [associations]
symbol:Rab7 "RAB7, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005764 "lysosome"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005770
"late endosome" evidence=ISO;IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0007174 "epidermal growth
factor catabolic process" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008333 "endosome
to lysosome transport" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0045453 "bone resorption"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0090383 "phagosome acidification" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] [GO:0097208 "alveolar
lamellar body" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105068 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0045335
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 GO:GO:0033365
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 KO:K07897
OrthoDB:EOG4QFWF4 OMA:SPRDPEH GO:GO:0007174 EMBL:X89650
EMBL:AK005004 EMBL:BC004597 EMBL:BC086793 IPI:IPI00408892
PIR:S62733 RefSeq:NP_033031.2 UniGene:Mm.333233 UniGene:Mm.486309
ProteinModelPortal:P51150 SMR:P51150 STRING:P51150
PhosphoSite:P51150 PaxDb:P51150 PRIDE:P51150
Ensembl:ENSMUST00000095048 Ensembl:ENSMUST00000113596
Ensembl:ENSMUST00000113597 Ensembl:ENSMUST00000113598
Ensembl:ENSMUST00000113600 GeneID:19349 KEGG:mmu:19349 CTD:19349
InParanoid:P51150 NextBio:296377 Bgee:P51150 CleanEx:MM_RAB7
Genevestigator:P51150 Uniprot:P51150
Length = 207
Score = 138 (53.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L T +QA Y+K N F +SA INV + + I +
Sbjct: 126 KID----LENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 256 ERNLTIGEPI 265
E EPI
Sbjct: 181 ELYNEFPEPI 190
>RGD|61908 [details] [associations]
symbol:Rab7a "RAB7A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late endosome"
evidence=ISO;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=IEA;ISO]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0042470 "melanosome" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO;ISS] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone resorption"
evidence=IMP] [GO:0048365 "Rac GTPase binding" evidence=IPI]
[GO:0090383 "phagosome acidification" evidence=ISO;ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO;ISS] [GO:0097208 "alveolar
lamellar body" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:61908 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0097208 GO:GO:0005770 GO:GO:0045453
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 OMA:SPRDPEH
EMBL:X12535 EMBL:AF286535 EMBL:AB158427 EMBL:AB158428 EMBL:BC072470
IPI:IPI00215564 PIR:S01934 RefSeq:NP_076440.1 UniGene:Rn.1425
PDB:1VG0 PDB:1VG1 PDB:1VG8 PDB:1VG9 PDBsum:1VG0 PDBsum:1VG1
PDBsum:1VG8 PDBsum:1VG9 ProteinModelPortal:P09527 SMR:P09527
IntAct:P09527 MINT:MINT-1775656 STRING:P09527 PhosphoSite:P09527
PRIDE:P09527 Ensembl:ENSRNOT00000016432 GeneID:29448 KEGG:rno:29448
UCSC:RGD:61908 InParanoid:P09527 EvolutionaryTrace:P09527
NextBio:609213 Genevestigator:P09527 GermOnline:ENSRNOG00000012247
Uniprot:P09527
Length = 207
Score = 138 (53.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 52/190 (27%), Positives = 84/190 (44%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L T +QA Y+K N F +SA INV + + I +
Sbjct: 126 KID----LENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 256 ERNLTIGEPI 265
E EPI
Sbjct: 181 ELYNEFPEPI 190
>ZFIN|ZDB-GENE-040426-1352 [details] [associations]
symbol:rab7 "RAB7, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-1352 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P35278 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 CTD:19349
OMA:FETSAKV EMBL:CR854846 EMBL:BC054602 EMBL:BC155202
IPI:IPI00486424 RefSeq:NP_957222.1 UniGene:Dr.12260 SMR:Q7T2C6
STRING:Q7T2C6 Ensembl:ENSDART00000027014 GeneID:393902
KEGG:dre:393902 InParanoid:Q7T2C6 NextBio:20814880 Uniprot:Q7T2C6
Length = 207
Score = 138 (53.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 48/191 (25%), Positives = 87/191 (45%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ +LGD +GKTS + +YV + G + + K ++V ++ IW+ G
Sbjct: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
Query: 142 DAKAQDHLPVAC-KDSIAILFMFDLTSRCTLKSVIRWYQ----QARKCNQTAIP-IIIGT 195
+ Q L VA + + + +FD+T+ T K++ W QA + P +++G
Sbjct: 67 QERFQS-LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKLFDIPWT 254
K D ++ + +A+A+ ++ N +F +SA INV + + I
Sbjct: 126 KID------LENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179
Query: 255 LERNLTIGEPI 265
+E EPI
Sbjct: 180 VELYNEFPEPI 190
>ZFIN|ZDB-GENE-080722-14 [details] [associations]
symbol:rab3da "RAB3D, member RAS oncogene family, a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-080722-14 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
EMBL:BX901942 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101942 OrthoDB:EOG4TB4C6 IPI:IPI00631632
RefSeq:NP_001139069.1 UniGene:Dr.80431 Ensembl:ENSDART00000023757
Ensembl:ENSDART00000146372 GeneID:567288 CTD:567288
NextBio:20888605 Uniprot:B8A665
Length = 223
Score = 140 (54.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 39/159 (24%), Positives = 73/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G +
Sbjct: 27 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVYRNEKRVKLQIWDTAGQER 86
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L M+D+T++ + +V W Q + + A I++G K D ++
Sbjct: 87 YRTITTAYYRGAMGFLLMYDITNQDSFYAVQDWATQIKTYSWDNAQVILVGNKCD--LE- 143
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
D + + A L F +SA NINV ++ +
Sbjct: 144 --DDRLVAREDGQRLANELGFQFFEASAKDNINVKQVFE 180
>ZFIN|ZDB-GENE-060825-283 [details] [associations]
symbol:zgc:153710 "zgc:153710" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-060825-283 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104044 KO:K07919
OMA:TWIEECN OrthoDB:EOG4WH8MS EMBL:BX004830 EMBL:BC122389
IPI:IPI00490111 RefSeq:NP_001038893.1 UniGene:Dr.86884 SMR:Q0P3Y1
Ensembl:ENSDART00000080042 GeneID:751718 KEGG:dre:751718
InParanoid:Q0P3Y1 NextBio:20917860 Uniprot:Q0P3Y1
Length = 236
Score = 141 (54.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 43/175 (24%), Positives = 86/175 (49%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD ++GKT ++ G G++ +K + + G +I +W+ G +
Sbjct: 40 KIIVIGDSNVGKTCLTFRFTGGAFPCKTEATIGVDFREKAVEIEGEKIKVQVWDTAGQER 99
Query: 145 AQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCN----QTAIP-IIIGTKFD 198
+ + ++ A++F++D+T + +++ W Q+ CN +A+P +++G K D
Sbjct: 100 FRKSMVEHYYRNVHAVVFVYDVTKMASFQNLKTWIQE---CNGHGVSSAVPRVLVGNKCD 156
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT---YNINVNKILKFITAKL 248
D IQ+P ++ A +A A N LF +SA + NV+ I + +L
Sbjct: 157 LVDQIQVP-------SNTALKFADAYNMLLFETSAKDPKESQNVDSIFMCLACRL 204
>ZFIN|ZDB-GENE-041114-53 [details] [associations]
symbol:rab11a "RAB11a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0070121 "Kupffer's vesicle development"
evidence=IMP] [GO:0032402 "melanosome transport" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041114-53
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0001525 GO:GO:0070121 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:BX908395 EMBL:BC085585 EMBL:BX914216 IPI:IPI00510031
RefSeq:NP_001007360.1 UniGene:Dr.119095 SMR:Q5U3E1 STRING:Q5U3E1
Ensembl:ENSDART00000060766 GeneID:492487 KEGG:dre:492487
InParanoid:Q5U3E1 NextBio:20865048 Uniprot:Q5U3E1
Length = 215
Score = 139 (54.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 35/168 (20%), Positives = 79/168 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G + IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +ARA+A+ + +SA + NV + I +++ I
Sbjct: 130 --HLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRI 175
>RGD|1311959 [details] [associations]
symbol:Rab22a "RAB22A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=IEA;ISO] [GO:0005769 "early
endosome" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006897 "endocytosis" evidence=IEA;ISO] [GO:0007032 "endosome
organization" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 RGD:1311959
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:CH474062
GeneTree:ENSGT00640000091139 CTD:57403 KO:K07891 IPI:IPI00948892
RefSeq:NP_001102436.1 UniGene:Rn.37799 Ensembl:ENSRNOT00000064400
GeneID:366265 KEGG:rno:366265 UCSC:RGD:1311959 NextBio:689084
Uniprot:D4A9H0
Length = 187
Score = 133 (51.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 44/166 (26%), Positives = 82/166 (49%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ + S+++L + TLK+ W ++ R+ +I + I G K D
Sbjct: 66 RLLSCTAQSSSYSLSVL----QETFSTLKN---WVRELRQHGPPSIVVAIAGNKCD---- 114
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L D++ + A+ YA +++A +SA IN+N++ I+ +L
Sbjct: 115 LT-DVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRL 159
>MGI|MGI:2443284 [details] [associations]
symbol:Rab26 "RAB26, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017157 "regulation of exocytosis" evidence=ISO] [GO:0019002
"GMP binding" evidence=ISO] [GO:0031226 "intrinsic to plasma
membrane" evidence=ISO] [GO:0035272 "exocrine system development"
evidence=ISO] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISO] [GO:0045055 "regulated secretory pathway"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:2443284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0031226 PROSITE:PS51419 GO:GO:0030667
GO:GO:0043001 eggNOG:COG1100 GO:GO:0045055 HOVERGEN:HBG009351
GO:GO:0017157 GO:GO:0019002 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 CTD:25837 KO:K07913 GO:GO:0035272
ChiTaRS:RAB26 EMBL:BC094931 IPI:IPI00671283 RefSeq:NP_796349.1
UniGene:Mm.266033 ProteinModelPortal:Q504M8 SMR:Q504M8
STRING:Q504M8 PhosphoSite:Q504M8 PaxDb:Q504M8 PRIDE:Q504M8
Ensembl:ENSMUST00000035797 GeneID:328778 KEGG:mmu:328778
InParanoid:Q504M8 NextBio:398424 Bgee:Q504M8 CleanEx:MM_RAB26
Genevestigator:Q504M8 GermOnline:ENSMUSG00000052752 Uniprot:Q504M8
Length = 260
Score = 142 (55.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/141 (25%), Positives = 71/141 (50%)
Query: 61 PGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGS--PGEGL 118
P ++RPSL + D VA K+ L+GD +GKT L ++ D G+ G+
Sbjct: 49 PPQSIRPSLGSTGDFYD----VAFKVMLVGDSGVGKTCLLVRFK-DGAFLAGTFISTVGI 103
Query: 119 NMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWY 178
+ +K L V G ++ IW+ G + + +D+ A+L ++D+T++ + ++ W
Sbjct: 104 DFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWL 163
Query: 179 QQARK-CNQTAIPIIIGTKFD 198
+ ++ Q + +++G K D
Sbjct: 164 TEIQEYAQQDVVLMLLGNKVD 184
>UNIPROTKB|P11023 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9913 "Bos
taurus" [GO:0050975 "sensory perception of touch" evidence=ISS]
[GO:0016188 "synaptic vesicle maturation" evidence=ISS] [GO:0007274
"neuromuscular synaptic transmission" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0051602 "response to electrical
stimulus" evidence=ISS] [GO:0048790 "maintenance of presynaptic
active zone structure" evidence=ISS] [GO:0031630 "regulation of
synaptic vesicle fusion to presynaptic membrane" evidence=ISS]
[GO:0030324 "lung development" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016079 "synaptic
vesicle exocytosis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0003016 "respiratory
system process" evidence=ISS] [GO:0016020 "membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001669 "acrosomal
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0016020
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 EMBL:M19885 EMBL:BC118278
IPI:IPI00703436 PIR:A29224 RefSeq:NP_776871.2 UniGene:Bt.2362
ProteinModelPortal:P11023 SMR:P11023 STRING:P11023 PRIDE:P11023
Ensembl:ENSBTAT00000014062 GeneID:282029 KEGG:bta:282029 CTD:5864
GeneTree:ENSGT00690000101942 InParanoid:P11023 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 NextBio:20805892 GO:GO:0048790
Uniprot:P11023
Length = 220
Score = 139 (54.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A +++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD--ME- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
D + + + R A L F +SA NINV +
Sbjct: 141 --DERVVSSERGRQLADHLGFEFFEASAKDNINVKQ 174
>UNIPROTKB|P20336 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0001671 "ATPase activator activity" evidence=IEA] [GO:0003016
"respiratory system process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0016188 "synaptic vesicle maturation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0048790 "maintenance of presynaptic active zone structure"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0051117 "ATPase binding" evidence=IEA] [GO:0051602 "response to
electrical stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003924 "GTPase activity" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007269 "neurotransmitter
secretion" evidence=TAS] [GO:0014047 "glutamate secretion"
evidence=TAS] [GO:0060201 "clathrin-sculpted acetylcholine
transport vesicle membrane" evidence=TAS] [GO:0060203
"clathrin-sculpted glutamate transport vesicle membrane"
evidence=TAS] [GO:0061202 "clathrin-sculpted gamma-aminobutyric
acid transport vesicle membrane" evidence=TAS] [GO:0070083
"clathrin-sculpted monoamine transport vesicle membrane"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IMP;TAS]
Reactome:REACT_13685 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791
GO:GO:0007409 GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671
GO:GO:0007005 EMBL:CH471106 GO:GO:0007269 GO:GO:0014047
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0061202 GO:GO:0016188 EMBL:AC068499 GO:GO:0031630
HOGENOM:HOG000233968 CTD:5864 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:M28210 EMBL:AF157809
EMBL:AF157806 EMBL:AF157807 EMBL:AF157808 EMBL:AF254795
EMBL:AF498931 EMBL:AK289559 EMBL:BC011782 IPI:IPI00023504
PIR:C34323 RefSeq:NP_002857.1 UniGene:Hs.27744
ProteinModelPortal:P20336 SMR:P20336 IntAct:P20336 STRING:P20336
PhosphoSite:P20336 DMDM:131801 PaxDb:P20336 PRIDE:P20336 DNASU:5864
Ensembl:ENST00000222256 GeneID:5864 KEGG:hsa:5864 UCSC:uc002nie.2
GeneCards:GC19M018307 HGNC:HGNC:9777 HPA:CAB009949 HPA:HPA003160
MIM:179490 neXtProt:NX_P20336 PharmGKB:PA34132 InParanoid:P20336
PhylomeDB:P20336 GenomeRNAi:5864 NextBio:22774 Bgee:P20336
CleanEx:HS_RAB3A Genevestigator:P20336 GermOnline:ENSG00000105649
GO:GO:0060201 GO:GO:0060203 GO:GO:0070083 Uniprot:P20336
Length = 220
Score = 139 (54.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A +++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD--ME- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
D + + + R A L F +SA NINV +
Sbjct: 141 --DERVVSSERGRQLADHLGFEFFEASAKDNINVKQ 174
>UNIPROTKB|Q06AU3 [details] [associations]
symbol:RAB3A "Ras-related protein Rab-3A" species:9823 "Sus
scrofa" [GO:0030324 "lung development" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0016079 "synaptic vesicle exocytosis"
evidence=ISS] [GO:0051602 "response to electrical stimulus"
evidence=ISS] [GO:0050975 "sensory perception of touch"
evidence=ISS] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=ISS] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=ISS] [GO:0017157
"regulation of exocytosis" evidence=ISS] [GO:0016188 "synaptic
vesicle maturation" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0008021 "synaptic vesicle"
evidence=ISS] [GO:0007274 "neuromuscular synaptic transmission"
evidence=ISS] [GO:0007005 "mitochondrion organization"
evidence=ISS] [GO:0003016 "respiratory system process"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0030324 GO:GO:0015031 GO:GO:0008021 GO:GO:0051602
GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0007005 GO:GO:0016079
eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351 GO:GO:0016188
GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864
GeneTree:ENSGT00690000101942 KO:K07882 OMA:QLTEQPA
OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:DQ917632 RefSeq:NP_001116651.1
UniGene:Ssc.5969 ProteinModelPortal:Q06AU3 SMR:Q06AU3 PRIDE:Q06AU3
Ensembl:ENSSSCT00000015183 GeneID:100144498 KEGG:ssc:100144498
Uniprot:Q06AU3
Length = 220
Score = 139 (54.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A +++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD--ME- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
D + + + R A L F +SA NINV +
Sbjct: 141 --DERVVSSERGRQLADHLGFEFFEASAKDNINVKQ 174
>MGI|MGI:97843 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0001669 "acrosomal vesicle" evidence=IDA] [GO:0001671 "ATPase
activator activity" evidence=ISO] [GO:0003016 "respiratory system
process" evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IMP] [GO:0016188 "synaptic vesicle maturation"
evidence=IMP] [GO:0017157 "regulation of exocytosis" evidence=IDA]
[GO:0030324 "lung development" evidence=IMP] [GO:0031630
"regulation of synaptic vesicle fusion to presynaptic membrane"
evidence=IMP] [GO:0032781 "positive regulation of ATPase activity"
evidence=ISO] [GO:0043229 "intracellular organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IMP]
[GO:0050975 "sensory perception of touch" evidence=IMP] [GO:0051020
"GTPase binding" evidence=ISO] [GO:0051117 "ATPase binding"
evidence=ISO] [GO:0051602 "response to electrical stimulus"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:97843 EMBL:X72966 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0043234 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0001669 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975 HOVERGEN:HBG009351
GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968 CTD:5864 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:AK005362
EMBL:AK158727 EMBL:AK161975 EMBL:BC053519 IPI:IPI00122965
PIR:S34070 RefSeq:NP_001159871.1 RefSeq:NP_033027.1 UniGene:Mm.5083
ProteinModelPortal:P63011 SMR:P63011 DIP:DIP-31051N IntAct:P63011
MINT:MINT-85820 STRING:P63011 PhosphoSite:P63011 PaxDb:P63011
PRIDE:P63011 Ensembl:ENSMUST00000034301 Ensembl:ENSMUST00000110090
Ensembl:ENSMUST00000110092 Ensembl:ENSMUST00000110093 GeneID:19339
KEGG:mmu:19339 InParanoid:P63011 ChiTaRS:RAB3A NextBio:296339
Bgee:P63011 CleanEx:MM_RAB3A Genevestigator:P63011
GermOnline:ENSMUSG00000031840 Uniprot:P63011
Length = 220
Score = 139 (54.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A +++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD--ME- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
D + + + R A L F +SA NINV +
Sbjct: 141 --DERVVSSERGRQLADHLGFEFFEASAKDNINVKQ 174
>RGD|3528 [details] [associations]
symbol:Rab3a "RAB3A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001669 "acrosomal vesicle" evidence=IEA;ISO]
[GO:0001671 "ATPase activator activity" evidence=IDA] [GO:0003016
"respiratory system process" evidence=IEA;ISO] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IEA;ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0008021 "synaptic vesicle"
evidence=ISO;IDA] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016079 "synaptic vesicle
exocytosis" evidence=IEA;ISO] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA;ISO] [GO:0017157 "regulation of exocytosis"
evidence=ISO] [GO:0030324 "lung development" evidence=IEA;ISO]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032482 "Rab protein signal
transduction" evidence=IC] [GO:0032781 "positive regulation of ATPase
activity" evidence=IDA] [GO:0043229 "intracellular organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0048790
"maintenance of presynaptic active zone structure" evidence=IEA;ISO]
[GO:0050975 "sensory perception of touch" evidence=IEA;ISO]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0051117 "ATPase
binding" evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3528
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0043234 GO:GO:0016020 GO:GO:0030324 GO:GO:0015031 GO:GO:0008021
GO:GO:0051602 GO:GO:0007274 GO:GO:0003924 GO:GO:0009791 GO:GO:0007409
GO:GO:0003016 PROSITE:PS51419 GO:GO:0001671 GO:GO:0007005
GO:GO:0051117 GO:GO:0016079 eggNOG:COG1100 GO:GO:0050975
HOVERGEN:HBG009351 GO:GO:0016188 GO:GO:0031630 HOGENOM:HOG000233968
GO:GO:0032482 CTD:5864 GeneTree:ENSGT00690000101942 KO:K07882
OMA:QLTEQPA OrthoDB:EOG4TB4C6 GO:GO:0048790 EMBL:X06889 EMBL:BC087580
IPI:IPI00325762 PIR:S01765 RefSeq:NP_037150.2 UniGene:Rn.44409
PDB:1ZBD PDB:3RAB PDBsum:1ZBD PDBsum:3RAB ProteinModelPortal:P63012
SMR:P63012 IntAct:P63012 MINT:MINT-1506235 STRING:P63012
PhosphoSite:P63012 PRIDE:P63012 Ensembl:ENSRNOT00000026391
GeneID:25531 KEGG:rno:25531 UCSC:RGD:3528 InParanoid:P63012
EvolutionaryTrace:P63012 NextBio:607029 ArrayExpress:P63012
Genevestigator:P63012 GermOnline:ENSRNOG00000019433 Uniprot:P63012
Length = 220
Score = 139 (54.0 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 24 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A +++G K D ++
Sbjct: 84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD--ME- 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
D + + + R A L F +SA NINV +
Sbjct: 141 --DERVVSSERGRQLADHLGFEFFEASAKDNINVKQ 174
>UNIPROTKB|E2RFR4 [details] [associations]
symbol:RAB3D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101942 EMBL:AAEX03012413
Ensembl:ENSCAFT00000027638 NextBio:20852320 Uniprot:E2RFR4
Length = 221
Score = 139 (54.0 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 41/159 (25%), Positives = 72/159 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 26 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 85
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ L M+D+ ++ + +V W Q + + A I++G K D ++
Sbjct: 86 YRTITTAYYRGAMGFLLMYDVANQESFAAVQDWATQIKTYSWDNAQVILVGNKCD--LE- 142
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
D + R A L F +SA NINV ++ +
Sbjct: 143 --DERVVPTEDGRRLADDLGFEFFEASAKENINVKQVFE 179
>UNIPROTKB|Q17QU4 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9913
"Bos taurus" [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0050808 "synapse organization" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 GO:GO:0050808 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J EMBL:BC118177
IPI:IPI00691206 RefSeq:NP_001069563.1 UniGene:Bt.55967
ProteinModelPortal:Q17QU4 PRIDE:Q17QU4 Ensembl:ENSBTAT00000026354
GeneID:537560 KEGG:bta:537560 CTD:116442 InParanoid:Q17QU4
KO:K07925 OMA:TKSDRRC NextBio:20877158 Uniprot:Q17QU4
Length = 213
Score = 138 (53.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/180 (21%), Positives = 83/180 (46%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT--AIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++ + Q + ++
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL 120
Query: 193 IGTKFDDFIQLPIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D +D Q + +A A A +SA INV K +T ++++
Sbjct: 121 VGHKCD------LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYEL 174
>UNIPROTKB|Q96DA2 [details] [associations]
symbol:RAB39B "Ras-related protein Rab-39B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0050808
"synapse organization" evidence=ISS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
Orphanet:777 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL356738 HOGENOM:HOG000233968 OrthoDB:EOG43JC5J CTD:116442
KO:K07925 OMA:TKSDRRC EMBL:AY052478 EMBL:AL834460 EMBL:BC009714
IPI:IPI00060801 RefSeq:NP_741995.1 UniGene:Hs.632832
ProteinModelPortal:Q96DA2 SMR:Q96DA2 STRING:Q96DA2
PhosphoSite:Q96DA2 DMDM:27734447 PaxDb:Q96DA2 PeptideAtlas:Q96DA2
PRIDE:Q96DA2 DNASU:116442 Ensembl:ENST00000369454 GeneID:116442
KEGG:hsa:116442 UCSC:uc004fne.3 GeneCards:GC0XM154487
HGNC:HGNC:16499 HPA:HPA001114 MIM:300271 MIM:300774
neXtProt:NX_Q96DA2 PharmGKB:PA34131 InParanoid:Q96DA2
PhylomeDB:Q96DA2 GenomeRNAi:116442 NextBio:79915 Bgee:Q96DA2
CleanEx:HS_RAB39B Genevestigator:Q96DA2 GermOnline:ENSG00000155961
Uniprot:Q96DA2
Length = 213
Score = 138 (53.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/180 (21%), Positives = 83/180 (46%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT--AIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++ + Q + ++
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL 120
Query: 193 IGTKFDDFIQLPIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D +D Q + +A A A +SA INV K +T ++++
Sbjct: 121 VGHKCD------LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYEL 174
>UNIPROTKB|F2Z552 [details] [associations]
symbol:LOC100516775 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050808 "synapse organization" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0016192
GO:GO:0015031 GO:GO:0050808 GeneTree:ENSGT00690000101664 KO:K07925
OMA:TKSDRRC EMBL:CU861979 RefSeq:XP_003135565.1
ProteinModelPortal:F2Z552 PRIDE:F2Z552 Ensembl:ENSSSCT00000022617
GeneID:100516775 KEGG:ssc:100516775 Uniprot:F2Z552
Length = 213
Score = 138 (53.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/180 (21%), Positives = 83/180 (46%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT--AIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++ + Q + ++
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL 120
Query: 193 IGTKFDDFIQLPIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D +D Q + +A A A +SA INV K +T ++++
Sbjct: 121 VGHKCD------LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYEL 174
>MGI|MGI:1915040 [details] [associations]
symbol:Rab39b "RAB39B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0050808 "synapse organization" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1915040
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 GO:GO:0050808
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG43JC5J
CTD:116442 KO:K07925 EMBL:AK039013 EMBL:AK048981 EMBL:AK160737
EMBL:BC050853 EMBL:BC052472 IPI:IPI00272230 RefSeq:NP_780331.1
UniGene:Mm.45148 ProteinModelPortal:Q8BHC1 SMR:Q8BHC1
PhosphoSite:Q8BHC1 PaxDb:Q8BHC1 PRIDE:Q8BHC1
Ensembl:ENSMUST00000033545 GeneID:67790 KEGG:mmu:67790
InParanoid:Q8BHC1 NextBio:325571 Bgee:Q8BHC1 CleanEx:MM_RAB39B
Genevestigator:Q8BHC1 GermOnline:ENSMUSG00000031202 Uniprot:Q8BHC1
Length = 213
Score = 138 (53.6 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 39/180 (21%), Positives = 83/180 (46%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT--AIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++ + Q + ++
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL 120
Query: 193 IGTKFDDFIQLPIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D +D Q + +A A A +SA INV K +T ++++
Sbjct: 121 VGHKCD------LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYEL 174
>ZFIN|ZDB-GENE-041114-122 [details] [associations]
symbol:zgc:101559 "zgc:101559" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-041114-122 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 EMBL:BC085368
IPI:IPI00493313 RefSeq:NP_001007418.1 UniGene:Dr.82860
ProteinModelPortal:Q5U3W4 SMR:Q5U3W4 GeneID:492776 KEGG:dre:492776
InParanoid:Q5U3W4 NextBio:20865274 ArrayExpress:Q5U3W4
Uniprot:Q5U3W4
Length = 233
Score = 140 (54.3 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 36/140 (25%), Positives = 69/140 (49%)
Query: 66 RPSLCH-SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKT 124
R SL + S + D KI ++GD ++GKT ++ G + G++ ++T
Sbjct: 18 RESLANDSCQEYDGPQARVFKIIVIGDSNVGKTCLTYRFCGGKFLSNPEATIGVDFRERT 77
Query: 125 LLVRGARISYSIWEVTGDAKAQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARK 183
L + G I IW+ G + + + ++ AI+F++D+TS + +S+ W ++
Sbjct: 78 LQLDGENIKLQIWDTAGQERFRKSMVEHYYRNVHAIIFVYDVTSLASFESLPEWIEE--- 134
Query: 184 CNQTAIP-----IIIGTKFD 198
CN ++P I++G K D
Sbjct: 135 CNHHSVPPMVPRILVGNKCD 154
>DICTYBASE|DDB_G0269238 [details] [associations]
symbol:rab11A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0034394 "protein localization to
cell surface" evidence=IMP] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000331 "contractile vacuole" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0031164 "contractile
vacuolar membrane" evidence=IEA;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA;IDA] [GO:0007231
"osmosensory signaling pathway" evidence=IMP] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA;IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005773 "vacuole" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269238 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0015031
PROSITE:PS51419 GO:GO:0007231 GO:GO:0031164 GO:GO:0034394
eggNOG:COG1100 KO:K07976 OMA:AMGTRDD EMBL:U02925 RefSeq:XP_646557.1
ProteinModelPortal:P36412 SMR:P36412 MINT:MINT-6947977
STRING:P36412 PRIDE:P36412 EnsemblProtists:DDB0191190
GeneID:8617525 KEGG:ddi:DDB_G0269238 ProtClustDB:CLSZ2431439
Uniprot:P36412
Length = 214
Score = 138 (53.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 38/168 (22%), Positives = 77/168 (45%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+GD +GK++ L ++ +E G+ +T+ G I +W+ G +
Sbjct: 15 KIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQL 203
+ + ++ L ++D+ + T KSV RW + R+ I I ++G K D ++
Sbjct: 75 YRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSD--LR- 131
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ +A+ +++ T +SA + NV + I +++ I
Sbjct: 132 --HLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHI 177
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 138 (53.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 37/180 (20%), Positives = 84/180 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K L+GD +GK++ L ++ +E G+ + +++ +I IW+ G +
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+T + + +V RW ++ R+ + + +++G K D
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGE 263
+ L+ +A+A+A N + +SA NV + + + ++F I R+L G+
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRI--VSNRSLEAGD 184
>UNIPROTKB|Q0IIG8 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0007420 "brain
development" evidence=ISS] [GO:0001654 "eye development"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC122650
IPI:IPI00691826 RefSeq:NP_001068967.1 UniGene:Bt.111463
ProteinModelPortal:Q0IIG8 SMR:Q0IIG8 STRING:Q0IIG8 PRIDE:Q0IIG8
Ensembl:ENSBTAT00000013018 GeneID:511160 KEGG:bta:511160
GeneTree:ENSGT00700000104044 InParanoid:Q0IIG8 KO:K07910
OMA:LETYTTR OrthoDB:EOG4VT5Z6 NextBio:20869801 Uniprot:Q0IIG8
Length = 206
Score = 137 (53.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ V G + +
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP-III 193
IW+ G + + P + + ++ ++D+T R T + W + C + I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>UNIPROTKB|Q9NP72 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9606
"Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0006897 "endocytosis" evidence=NAS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=NAS] [GO:0001654 "eye
development" evidence=ISS] [GO:0007420 "brain development"
evidence=ISS] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=NAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005622 EMBL:CH471072 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07910 OMA:LETYTTR OrthoDB:EOG4VT5Z6
CTD:22931 EMBL:AJ277145 EMBL:AJ277146 EMBL:AJ277147 EMBL:AJ277148
EMBL:AJ277149 EMBL:AF137372 EMBL:AY574034 EMBL:AF087860
EMBL:AF498950 EMBL:AF136974 EMBL:AL136734 EMBL:BT009840
EMBL:CR533455 EMBL:AK001555 EMBL:AK295443 EMBL:AK223153
EMBL:AL138920 EMBL:BC015014 EMBL:BC029350 IPI:IPI00014577
IPI:IPI00844361 IPI:IPI00922800 RefSeq:NP_001243339.1
RefSeq:NP_001243340.1 RefSeq:NP_001243341.1 RefSeq:NP_001243344.1
RefSeq:NP_067075.1 UniGene:Hs.406799 PDB:1X3S PDBsum:1X3S
ProteinModelPortal:Q9NP72 SMR:Q9NP72 IntAct:Q9NP72 STRING:Q9NP72
PhosphoSite:Q9NP72 DMDM:12230528 PaxDb:Q9NP72 PRIDE:Q9NP72
DNASU:22931 Ensembl:ENST00000356940 Ensembl:ENST00000535776
GeneID:22931 KEGG:hsa:22931 UCSC:uc001itv.3 GeneCards:GC10P027793
HGNC:HGNC:14244 HPA:HPA025928 MIM:602207 MIM:614222
neXtProt:NX_Q9NP72 Orphanet:2510 PharmGKB:PA34106 PhylomeDB:Q9NP72
ChiTaRS:RAB18 EvolutionaryTrace:Q9NP72 GenomeRNAi:22931
NextBio:43659 ArrayExpress:Q9NP72 Bgee:Q9NP72 CleanEx:HS_RAB18
Genevestigator:Q9NP72 GermOnline:ENSG00000099246 Uniprot:Q9NP72
Length = 206
Score = 137 (53.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ V G + +
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP-III 193
IW+ G + + P + + ++ ++D+T R T + W + C + I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>UNIPROTKB|I3LC07 [details] [associations]
symbol:RAB18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0005622 InterPro:IPR025662 PROSITE:PS00675
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR EMBL:FP476080
RefSeq:XP_003357800.1 ProteinModelPortal:I3LC07 SMR:I3LC07
PRIDE:I3LC07 Ensembl:ENSSSCT00000024844 GeneID:100620478
KEGG:ssc:100620478 Uniprot:I3LC07
Length = 206
Score = 137 (53.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ V G + +
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP-III 193
IW+ G + + P + + ++ ++D+T R T + W + C + I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>UNIPROTKB|Q5R5H5 [details] [associations]
symbol:RAB18 "Ras-related protein Rab-18" species:9601
"Pongo abelii" [GO:0001654 "eye development" evidence=ISS]
[GO:0007420 "brain development" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0007420
GO:GO:0015031 GO:GO:0005622 PROSITE:PS51419 GO:GO:0019003
InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR CTD:22931
EMBL:CR860884 RefSeq:NP_001127616.1 UniGene:Pab.18063
ProteinModelPortal:Q5R5H5 SMR:Q5R5H5 PRIDE:Q5R5H5
Ensembl:ENSPPYT00000002604 GeneID:100174695 KEGG:pon:100174695
InParanoid:Q5R5H5 Uniprot:Q5R5H5
Length = 206
Score = 137 (53.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ V G + +
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP-III 193
IW+ G + + P + + ++ ++D+T R T + W + C + I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>MGI|MGI:102790 [details] [associations]
symbol:Rab18 "RAB18, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:102790 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0007420 GO:GO:0015031 GO:GO:0016324 GO:GO:0005622
PROSITE:PS51419 GO:GO:0009925 eggNOG:COG1100 GO:GO:0019003
InterPro:IPR025662 GO:GO:0001654 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07910 OMA:LETYTTR OrthoDB:EOG4VT5Z6
CTD:22931 EMBL:X80333 EMBL:L04966 EMBL:AK045514 EMBL:AK140901
EMBL:AK143673 EMBL:AK146177 EMBL:AK146397 EMBL:AK154920
EMBL:BC056351 EMBL:M79308 IPI:IPI00116770 PIR:JN0874
RefSeq:NP_851415.1 UniGene:Mm.132802 ProteinModelPortal:P35293
SMR:P35293 STRING:P35293 PhosphoSite:P35293 PaxDb:P35293
PRIDE:P35293 Ensembl:ENSMUST00000097680 GeneID:19330 KEGG:mmu:19330
InParanoid:P35293 NextBio:296305 Bgee:P35293 CleanEx:MM_RAB18
Genevestigator:P35293 GermOnline:ENSMUSG00000073639 Uniprot:P35293
Length = 206
Score = 137 (53.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ V G + +
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP-III 193
IW+ G + + P + + ++ ++D+T R T + W + C + I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>RGD|1308905 [details] [associations]
symbol:Rab18 "RAB18, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=ISS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007420 "brain development"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1308905 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0007420 GO:GO:0015031 GO:GO:0005622
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 InterPro:IPR025662
GO:GO:0001654 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104044 KO:K07910 OMA:LETYTTR
OrthoDB:EOG4VT5Z6 CTD:22931 EMBL:BC089957 IPI:IPI00198316
RefSeq:NP_001012486.1 UniGene:Rn.221766 ProteinModelPortal:Q5EB77
SMR:Q5EB77 IntAct:Q5EB77 STRING:Q5EB77 PRIDE:Q5EB77
Ensembl:ENSRNOT00000025828 GeneID:307039 KEGG:rno:307039
UCSC:RGD:1308905 InParanoid:Q5EB77 NextBio:656875
Genevestigator:Q5EB77 GermOnline:ENSRNOG00000018972 Uniprot:Q5EB77
Length = 206
Score = 137 (53.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 31/125 (24%), Positives = 62/125 (49%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ KT+ V G + +
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP-III 193
IW+ G + + P + + ++ ++D+T R T + W + C + I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>WB|WBGene00004285 [details] [associations]
symbol:rab-37 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
KO:K07976 GeneTree:ENSGT00700000104031 EMBL:FO081187
UniGene:Cel.23034 GeneID:180696 KEGG:cel:CELE_W01H2.3 CTD:180696
NextBio:910498 RefSeq:NP_001041294.1 ProteinModelPortal:G5EFA6
SMR:G5EFA6 EnsemblMetazoa:W01H2.3b WormBase:W01H2.3b OMA:KLKYGFV
Uniprot:G5EFA6
Length = 223
Score = 139 (54.0 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 44/197 (22%), Positives = 85/197 (43%)
Query: 63 TTVRPSLCHSHRH--LDAD--NLVALKISLLGDCHIGKTSFLEKYV-GDEKEQGGSPGEG 117
T SL HR LD D L K+ LLGD GKT L +Y G G
Sbjct: 5 TNEHASLKSKHRSEMLDLDMAELTTFKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVG 64
Query: 118 LNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW 177
++ +K + + ++ IW+ G + + +D+ A+L ++D+ +R + ++ W
Sbjct: 65 IDYRNKLITMGDKKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW 124
Query: 178 YQQARKCNQTAIPI-IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
Q ++ + A+ + ++G K D +P D + + A+A +SA N
Sbjct: 125 LSQIKEYGKEAVQVTLVGNKCDLPRAVPTD-------EGKRLAEAYQIPFMETSAKTGFN 177
Query: 237 VNKILKFITAKLFDIPW 253
V++ + ++ + +
Sbjct: 178 VDRAFLGLAERMLKLKY 194
>RGD|2319287 [details] [associations]
symbol:LOC100361891 "RAB5A, member RAS oncogene family-like"
species:10116 "Rattus norvegicus" [GO:0001726 "ruffle"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005769
"early endosome" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006897 "endocytosis" evidence=ISO] [GO:0015629 "actin
cytoskeleton" evidence=ISO] [GO:0019001 "guanyl nucleotide binding"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0030139
"endocytic vesicle" evidence=ISO] [GO:0045121 "membrane raft"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] [GO:0051489 "regulation of filopodium assembly"
evidence=ISO] [GO:2000286 "receptor internalization involved in
canonical Wnt receptor signaling pathway" evidence=ISO]
REFSEQ:XM_003751377 Ncbi:XP_003751425
Length = 215
Score = 138 (53.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 39/172 (22%), Positives = 82/172 (47%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ + K+ LLG+ +GK+S + ++V + + G + +T+ + + + IW+
Sbjct: 16 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWD 75
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKF 197
G + P+ + + A + ++D+T+ + W ++ R+ + + + G K
Sbjct: 76 TAGQERYHSLAPMYYRGAQAAIVVYDITNEESFSRAKNWVKELQRQASPNIVIALSGNKA 135
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +D Q +A++YA N+ LF +SA +NVN+I I KL
Sbjct: 136 DLANKRAVDFQ-----EAQSYADD-NSLLFMETSAKTPMNVNEIFMAIAKKL 181
>TAIR|locus:2035302 [details] [associations]
symbol:RABA3 "RAB GTPase homolog A3" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005768 "endosome" evidence=IDA]
[GO:0009504 "cell plate" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0009504 EMBL:AC023628 KO:K07976
HOGENOM:HOG000233968 HSSP:P20339 EMBL:BT010707 EMBL:BT010979
IPI:IPI00532357 PIR:B86142 RefSeq:NP_171628.2 UniGene:At.42661
ProteinModelPortal:Q9LNK1 SMR:Q9LNK1 IntAct:Q9LNK1 PaxDb:Q9LNK1
PRIDE:Q9LNK1 EnsemblPlants:AT1G01200.1 GeneID:839493
KEGG:ath:AT1G01200 TAIR:At1g01200 InParanoid:Q9LNK1 OMA:HADDSAV
PhylomeDB:Q9LNK1 ProtClustDB:CLSN2690626 Genevestigator:Q9LNK1
Uniprot:Q9LNK1
Length = 237
Score = 140 (54.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 38/168 (22%), Positives = 78/168 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++GD +GKT L ++ +E G+ +T+ +RG + IW+ G +
Sbjct: 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ + ++D+T R + V RW ++ R + +A+ +++G K D L
Sbjct: 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKAD----L 145
Query: 204 PIDLQWTIASQARAYAKALNATLFFS--SATYNINVNKILKFITAKLF 249
+ + A +A+ LFFS SA NV++ + ++F
Sbjct: 146 SVGKRAVPTEDAVEFAETQR--LFFSEVSALSGGNVDEAFFRLLEEIF 191
>UNIPROTKB|E2RIA5 [details] [associations]
symbol:RAB3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051602 "response to electrical stimulus"
evidence=IEA] [GO:0050975 "sensory perception of touch"
evidence=IEA] [GO:0048790 "maintenance of presynaptic active zone
structure" evidence=IEA] [GO:0031630 "regulation of synaptic
vesicle fusion to presynaptic membrane" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0016188 "synaptic vesicle
maturation" evidence=IEA] [GO:0016079 "synaptic vesicle exocytosis"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] [GO:0007274 "neuromuscular
synaptic transmission" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0003016 "respiratory system process"
evidence=IEA] [GO:0001669 "acrosomal vesicle" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0030324
GO:GO:0015031 GO:GO:0008021 GO:GO:0051602 GO:GO:0007274
GO:GO:0003924 GO:GO:0009791 GO:GO:0007409 GO:GO:0003016
GO:GO:0007005 GO:GO:0016079 GO:GO:0050975 GO:GO:0016188
GO:GO:0031630 GeneTree:ENSGT00690000101942 OMA:QLTEQPA
GO:GO:0048790 EMBL:AAEX03012283 ProteinModelPortal:E2RIA5
PRIDE:E2RIA5 Ensembl:ENSCAFT00000023719 NextBio:20858896
Uniprot:E2RIA5
Length = 226
Score = 139 (54.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++G+ +GKTSFL +Y D G++ KT+ RI IW+ G +
Sbjct: 30 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 89
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ + ++ + M+D+T+ + +V W Q + + A +++G K D ++
Sbjct: 90 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD--ME- 146
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
D + + + R A L F +SA NINV +
Sbjct: 147 --DERVVSSERGRQLADHLGFEFFEASAKDNINVKQ 180
>DICTYBASE|DDB_G0283757 [details] [associations]
symbol:rab1A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0283757 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000153_GR GO:GO:0015031 PROSITE:PS51419
EMBL:AAFI02000057 eggNOG:COG1100 KO:K07874 EMBL:L21009
RefSeq:XP_638915.1 ProteinModelPortal:P34139 SMR:P34139
PRIDE:P34139 EnsemblProtists:DDB0191476 GeneID:8624312
KEGG:ddi:DDB_G0283757 OMA:NRVGPPS ProtClustDB:CLSZ2430337
Uniprot:P34139
Length = 202
Score = 136 (52.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/165 (21%), Positives = 77/165 (46%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
++ D K+ L+GD +GK+ L ++ D + G++ +T+ + G I
Sbjct: 1 MNPDYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQ 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIG 194
IW+ G + + + + I+ ++D+T + T ++V +W Q+ R + +++G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVG 120
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
K D + +D + A+A+A +L +SA + NV +
Sbjct: 121 NKSDLVAKKVVDF-----NTAKAFADSLQIPFLETSAKQSTNVEQ 160
>UNIPROTKB|Q8WXH6 [details] [associations]
symbol:RAB40A "Ras-related protein Rab-40A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001496 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 Pfam:PF07525
PRINTS:PR00449 PROSITE:PS50225 SMART:SM00175 SMART:SM00253
SMART:SM00969 UniPathway:UPA00143 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0015031 GO:GO:0016567
GO:GO:0005622 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AF132748 EMBL:AF422143 EMBL:AB232637 EMBL:Z69733 EMBL:BC074854
EMBL:BC074855 EMBL:BC113501 EMBL:BC117232 IPI:IPI00514509
RefSeq:NP_543155.2 UniGene:Hs.706904 ProteinModelPortal:Q8WXH6
SMR:Q8WXH6 IntAct:Q8WXH6 PhosphoSite:Q8WXH6 DMDM:83287759
PRIDE:Q8WXH6 DNASU:142684 Ensembl:ENST00000304236
Ensembl:ENST00000372633 GeneID:142684 KEGG:hsa:142684
UCSC:uc004ekk.3 CTD:142684 GeneCards:GC0XM102754 HGNC:HGNC:18283
neXtProt:NX_Q8WXH6 PharmGKB:PA34137 HOGENOM:HOG000233967
InParanoid:Q8WXH6 KO:K07928 OMA:LLRHRMN OrthoDB:EOG40VVQ7
PhylomeDB:Q8WXH6 GenomeRNAi:142684 NextBio:84609 Bgee:Q8WXH6
CleanEx:HS_RAB40A Genevestigator:Q8WXH6 GermOnline:ENSG00000172476
Uniprot:Q8WXH6
Length = 277
Score = 142 (55.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK+ LE E S G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDRDVGKSEILESLQDGAAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + ++ ++D+ +R + + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEE-HAPGVPKILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QA+AYA+ L T F S N N+
Sbjct: 130 LAFKRQ-VPREQAQAYAERLGVTFFEVSPLCNFNI 163
>UNIPROTKB|P0C0E4 [details] [associations]
symbol:RAB40AL "Ras-related protein Rab-40A-like"
species:9606 "Homo sapiens" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR001496
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 Pfam:PF07525 PRINTS:PR00449 PROSITE:PS50225
SMART:SM00175 SMART:SM00253 SMART:SM00969 UniPathway:UPA00143
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0016567 PROSITE:PS51419
GO:GO:0044444 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233967 KO:K07928 OrthoDB:EOG45QHDR EMBL:Z95624
EMBL:BC101169 EMBL:BC101170 EMBL:BC101171 EMBL:BC101172
IPI:IPI00555763 RefSeq:NP_001027004.1 UniGene:Hs.449517
ProteinModelPortal:P0C0E4 SMR:P0C0E4 PhosphoSite:P0C0E4
DMDM:83287760 PRIDE:P0C0E4 Ensembl:ENST00000218249 GeneID:282808
KEGG:hsa:282808 UCSC:uc004ejs.3 CTD:282808 GeneCards:GC0XP102192
HGNC:HGNC:25410 MIM:300405 MIM:300519 neXtProt:NX_P0C0E4
Orphanet:85321 PharmGKB:PA142671103 InParanoid:P0C0E4 OMA:LRHRLNW
PhylomeDB:P0C0E4 GenomeRNAi:282808 NextBio:93520 Bgee:P0C0E4
CleanEx:HS_RAB40AL Genevestigator:P0C0E4 GermOnline:ENSG00000102128
Uniprot:P0C0E4
Length = 278
Score = 142 (55.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 38/155 (24%), Positives = 73/155 (47%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK+ LE E S G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + + ++ ++D+ +R + + + RW ++ + + +P I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEE-HAPGVPKILVGNR----LH 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
L Q QA+AYA+ L T F S N N+
Sbjct: 130 LAFKRQ-VPREQAQAYAERLGVTFFEVSPLCNFNI 163
>UNIPROTKB|A8MTC6 [details] [associations]
symbol:RAB37 "RAB37, member RAS oncogene family, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:CH471099
HOVERGEN:HBG009351 EMBL:AC016888 EMBL:AC064805 HOGENOM:HOG000233968
UniGene:Hs.351413 HGNC:HGNC:30268 ChiTaRS:RAB37 IPI:IPI00791421
SMR:A8MTC6 STRING:A8MTC6 Ensembl:ENST00000392610 Uniprot:A8MTC6
Length = 189
Score = 133 (51.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/116 (25%), Positives = 58/116 (50%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE-GLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLGD +GKT FL ++ G G++ +K + V G R+ IW+ G
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
+ + +D+ A+L ++D+T++ + ++ W + + Q + I ++G K D
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKAD 146
>UNIPROTKB|B4DT13 [details] [associations]
symbol:RAB11A "cDNA FLJ51542, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 EMBL:AC084854 EMBL:AC011939 CTD:8766 KO:K07904
RefSeq:NP_001193765.1 UniGene:Hs.321541 DNASU:8766 GeneID:8766
KEGG:hsa:8766 HGNC:HGNC:9760 GenomeRNAi:8766 NextBio:32876
IPI:IPI01022454 EMBL:AK300008 SMR:B4DT13 STRING:B4DT13
Ensembl:ENST00000569896 UCSC:uc010ujk.2 Uniprot:B4DT13
Length = 155
Score = 125 (49.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/143 (21%), Positives = 68/143 (47%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATL 226
L+ +ARA+A+ A +
Sbjct: 130 --HLRAVPTDEARAFAEKNEANV 150
>UNIPROTKB|E9PMJ1 [details] [associations]
symbol:RAB30 "Ras-related protein Rab-30" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:AP000893
HGNC:HGNC:9770 EMBL:AP001767 IPI:IPI00978752
ProteinModelPortal:E9PMJ1 SMR:E9PMJ1 Ensembl:ENST00000531021
ArrayExpress:E9PMJ1 Bgee:E9PMJ1 Uniprot:E9PMJ1
Length = 168
Score = 125 (49.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/157 (20%), Positives = 73/157 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+G+ +GKT + ++ G G++ M KT+ + G ++ IW+ G +
Sbjct: 11 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + + A++ +D+T + + + W ++ + + I +++G K D +
Sbjct: 71 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
+ Q +A +++A + +SA + NV K+
Sbjct: 131 EVSQQ-----RAEEFSEAQDMYYLETSAKESDNVEKL 162
>WB|WBGene00004274 [details] [associations]
symbol:rab-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;TAS] [GO:0005525 "GTP
binding" evidence=IEA;TAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006952 "defense response" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0055037
"recycling endosome" evidence=IDA] [GO:0060471 "cortical granule
exocytosis" evidence=IMP] [GO:0060473 "cortical granule"
evidence=IDA] [GO:0030703 "eggshell formation" evidence=IMP]
[GO:0032467 "positive regulation of cytokinesis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0032467 GO:GO:0006952
GO:GO:0002119 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473 GO:GO:0030703
HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 137 (53.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/166 (20%), Positives = 77/166 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G + IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R +Q + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
L+ +A+ YA+ + +SA + NV I +++
Sbjct: 130 --HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIY 173
>UNIPROTKB|O01803 [details] [associations]
symbol:rab-11.1 "Protein RAB-11.1" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0006915 GO:GO:0007264 GO:GO:0032467
GO:GO:0006952 GO:GO:0002119 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473
GO:GO:0030703 HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 137 (53.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 34/166 (20%), Positives = 77/166 (46%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G + IW+ G +
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + ++ L ++D+ T ++V RW ++ R +Q + +++G K D ++
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSD--LR- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
L+ +A+ YA+ + +SA + NV I +++
Sbjct: 130 --HLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIY 173
WARNING: HSPs involving 561 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.140 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 258 0.00087 114 3 11 22 0.39 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 811
No. of states in DFA: 606 (64 KB)
Total size of DFA: 204 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.18u 0.16s 19.34t Elapsed: 00:00:01
Total cpu time: 19.21u 0.16s 19.37t Elapsed: 00:00:01
Start: Thu May 9 18:07:33 2013 End: Thu May 9 18:07:34 2013
WARNINGS ISSUED: 2