BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041042
(268 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357471237|ref|XP_003605903.1| Septum-promoting GTP-binding protein [Medicago truncatula]
gi|355506958|gb|AES88100.1| Septum-promoting GTP-binding protein [Medicago truncatula]
Length = 276
Score = 352 bits (904), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 180/269 (66%), Positives = 214/269 (79%), Gaps = 8/269 (2%)
Query: 4 FNLKRRIERGVLILRRCISCFWEKLLMCSVGKP---IRYRML-PRSTVTSPSPSVLESGL 59
F L+RR+ V +LRRCI +LL+CS +P Y ML P S + SP S+L+S +
Sbjct: 12 FALRRRLHSRVSLLRRCILRALHRLLVCSGKQPGANATYSMLTPHSALPSPRASLLDSTV 71
Query: 60 VPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLN 119
T ++P + +++ LD D LV+LKISLLGDC IGKTSFL KYVG+EKEQG +G N
Sbjct: 72 --ETAIQPPVFNTN-ELDTD-LVSLKISLLGDCQIGKTSFLVKYVGNEKEQGVEQRKGPN 127
Query: 120 MMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQ 179
MDKTL+V GARISY IWEV GD K++D LP+ACKDS+AIL MFDLTSRCTL SV+ WY+
Sbjct: 128 QMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLTSRCTLNSVLGWYK 187
Query: 180 QARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
+ARK NQTAIP++IGTKFDDFIQLPID+QWTIAS+AR YAKALNATLFFSSATYNINVNK
Sbjct: 188 EARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNINVNK 247
Query: 240 ILKFITAKLFDIPWTLERNLTIGEPIIDF 268
I KFITAKLFD+PWT+ERNL +GEPIIDF
Sbjct: 248 IFKFITAKLFDLPWTVERNLNVGEPIIDF 276
>gi|225447296|ref|XP_002279761.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Vitis
vinifera]
Length = 290
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 176/285 (61%), Positives = 205/285 (71%), Gaps = 29/285 (10%)
Query: 6 LKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLVPGTTV 65
L+RR+ V +L RC+ W++ L+ S K I+Y+ L R+T + P VP T
Sbjct: 13 LRRRLLCRVSLLGRCLMRLWDRFLLISRPKSIKYKQLLRATTFAAKP-------VPSATT 65
Query: 66 RPSLCHSH---------------------RHLDAD-NLVALKISLLGDCHIGKTSFLEKY 103
R D D +LVALKISLLGDC IGKTSF+ KY
Sbjct: 66 PAFPPPPPPPPPLPPPALQSSGEAGFARCRERDKDSDLVALKISLLGDCQIGKTSFVIKY 125
Query: 104 VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMF 163
VG+EKEQG G+N+MDKTL V GARISYSIWEV GD KA +H+P+ACKDS+AIL+MF
Sbjct: 126 VGNEKEQGDIQTSGINLMDKTLYVGGARISYSIWEVGGDEKAHNHIPMACKDSVAILYMF 185
Query: 164 DLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALN 223
DLTSRCTL SVI WY QARK NQ AIP++IGTKFDDFIQLPIDLQWT+ASQARAYAKALN
Sbjct: 186 DLTSRCTLNSVISWYHQARKWNQNAIPVLIGTKFDDFIQLPIDLQWTVASQARAYAKALN 245
Query: 224 ATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
ATLFFSSATYNINVNKI KFITAKLF++PWT+ERNLT+GEP+IDF
Sbjct: 246 ATLFFSSATYNINVNKIFKFITAKLFNLPWTVERNLTVGEPMIDF 290
>gi|297739292|emb|CBI28943.3| unnamed protein product [Vitis vinifera]
Length = 1255
Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/285 (61%), Positives = 205/285 (71%), Gaps = 29/285 (10%)
Query: 6 LKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLVPGTTV 65
L+RR+ V +L RC+ W++ L+ S K I+Y+ L R+T + P VP T
Sbjct: 978 LRRRLLCRVSLLGRCLMRLWDRFLLISRPKSIKYKQLLRATTFAAKP-------VPSATT 1030
Query: 66 RPSLCHSH---------------------RHLDAD-NLVALKISLLGDCHIGKTSFLEKY 103
R D D +LVALKISLLGDC IGKTSF+ KY
Sbjct: 1031 PAFPPPPPPPPPLPPPALQSSGEAGFARCRERDKDSDLVALKISLLGDCQIGKTSFVIKY 1090
Query: 104 VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMF 163
VG+EKEQG G+N+MDKTL V GARISYSIWEV GD KA +H+P+ACKDS+AIL+MF
Sbjct: 1091 VGNEKEQGDIQTSGINLMDKTLYVGGARISYSIWEVGGDEKAHNHIPMACKDSVAILYMF 1150
Query: 164 DLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALN 223
DLTSRCTL SVI WY QARK NQ AIP++IGTKFDDFIQLPIDLQWT+ASQARAYAKALN
Sbjct: 1151 DLTSRCTLNSVISWYHQARKWNQNAIPVLIGTKFDDFIQLPIDLQWTVASQARAYAKALN 1210
Query: 224 ATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
ATLFFSSATYNINVNKI KFITAKLF++PWT+ERNLT+GEP+IDF
Sbjct: 1211 ATLFFSSATYNINVNKIFKFITAKLFNLPWTVERNLTVGEPMIDF 1255
>gi|356542832|ref|XP_003539869.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 278
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/266 (65%), Positives = 204/266 (76%), Gaps = 4/266 (1%)
Query: 6 LKRRIERGVLILRRCISCFWEKLLMCSVGKPIR--YRMLPRSTVTSPSPSVLESGL-VPG 62
++RR V +L+RC+ ++L+CS K Y MLP + + P P + L
Sbjct: 14 VRRRFHHRVSLLQRCLLRVLHRILLCSGSKATNATYSMLPPALPSPPPPVSSDGELGREE 73
Query: 63 TTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMD 122
+ S LD+D LV+LKISLLGDC IGKTSFL KYVGDEKEQ G+ EGLN MD
Sbjct: 74 MDLSSSAVFQTHDLDSD-LVSLKISLLGDCQIGKTSFLAKYVGDEKEQQGNQREGLNQMD 132
Query: 123 KTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR 182
KTL+V GARISY IWEV GD K++D LP+AC DS+AIL MFDLTSRCTL SV+ WY++AR
Sbjct: 133 KTLVVEGARISYCIWEVQGDGKSEDQLPMACMDSVAILIMFDLTSRCTLNSVVGWYKEAR 192
Query: 183 KCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
K NQTAIP++IGTKFDDFIQLPIDLQWTIA++AR YAKALNATLFFSSATYNINVNKI K
Sbjct: 193 KWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKALNATLFFSSATYNINVNKIFK 252
Query: 243 FITAKLFDIPWTLERNLTIGEPIIDF 268
FITAKLFD+PWT+ERNLT+GEPIIDF
Sbjct: 253 FITAKLFDLPWTVERNLTVGEPIIDF 278
>gi|356517632|ref|XP_003527491.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 279
Score = 340 bits (872), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/268 (66%), Positives = 210/268 (78%), Gaps = 7/268 (2%)
Query: 6 LKRRIERGVLILRRCISCFWEKLLMCSVGKPIR--YRMLPRSTVTSPSP--SVLESGLVP 61
L+RR V +L+RC+ ++L+CS KP Y MLP + + P P S E G
Sbjct: 14 LRRRFHHRVSLLQRCLLRVLHRILLCSGSKPTNATYSMLPPALPSPPPPMGSDGELGREE 73
Query: 62 GTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEK-EQGGSPGEGLNM 120
++ H+H LD+D LV+LKISLLGDC IGKTSFLEKYVGDEK +Q G+ EGLN
Sbjct: 74 MDLTSSAVFHTH-DLDSD-LVSLKISLLGDCQIGKTSFLEKYVGDEKDQQQGNQREGLNQ 131
Query: 121 MDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ 180
MDKTL+V GARISY IWEV GD K++D LP+AC DS+AIL MFDLTSRCTL SV+ WY++
Sbjct: 132 MDKTLVVEGARISYCIWEVQGDGKSEDQLPMACMDSVAILIMFDLTSRCTLNSVVGWYKE 191
Query: 181 ARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
ARK NQTAIP++IGTKFDDFIQLPIDLQWTIA++AR YAKALNATLFFSSATYNINVNKI
Sbjct: 192 ARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKALNATLFFSSATYNINVNKI 251
Query: 241 LKFITAKLFDIPWTLERNLTIGEPIIDF 268
KF+TAKLFD+PWT+ERNLT+GEPIIDF
Sbjct: 252 FKFVTAKLFDLPWTVERNLTVGEPIIDF 279
>gi|30686351|ref|NP_850622.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|11994637|dbj|BAB02832.1| unnamed protein product [Arabidopsis thaliana]
gi|22316556|emb|CAD44270.1| monomeric G-protein [Arabidopsis thaliana]
gi|332643018|gb|AEE76539.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 292
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/271 (64%), Positives = 205/271 (75%), Gaps = 18/271 (6%)
Query: 15 LILRRCISCFWEKLLMCSVGKPIRY----RMLPRSTVTSPSPSVLES------------G 58
LILRR W +++ C+ GK RY R LP TV+ PSPS + +
Sbjct: 23 LILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGGGE 82
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKE-QGGSPGEG 117
V ++V +SHR D+D LV+LKISLLGD IGKTSFL KYVG+EKE + +G
Sbjct: 83 FVRRSSVVYDNDNSHRRSDSD-LVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKG 141
Query: 118 LNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW 177
+N DKTL + GARISYSIWE+ G +++D +PVACKDS+AILFMFDLTSRCTL SVI W
Sbjct: 142 INCTDKTLYMGGARISYSIWELEGAERSRDQIPVACKDSVAILFMFDLTSRCTLNSVISW 201
Query: 178 YQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
YQQARK NQTAIP+++GTKFD+FIQLPIDLQWTIASQAR YAKALNATLFFSSA+YNINV
Sbjct: 202 YQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNINV 261
Query: 238 NKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
NKI KF+TAKLFD+PWT+ERNLTIGEPIIDF
Sbjct: 262 NKIFKFVTAKLFDLPWTVERNLTIGEPIIDF 292
>gi|224117478|ref|XP_002317584.1| predicted protein [Populus trichocarpa]
gi|222860649|gb|EEE98196.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/264 (62%), Positives = 207/264 (78%), Gaps = 6/264 (2%)
Query: 5 NLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLVPGTT 64
N+K I V + ++ W+++L CS+GKP+RYR L S SP P +E+G+ +
Sbjct: 21 NIKWNILERVTVFKQFFQFIWDRILACSIGKPVRYRRLA-SRPYSPPPEAMEAGV---ES 76
Query: 65 VRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKT 124
+ + C S + D+D LV LKISLLGDC IGKTSF+ KYVGDE+E+ GLN+MDKT
Sbjct: 77 LEAASC-SGFNPDSD-LVRLKISLLGDCQIGKTSFMIKYVGDEQEKKCLGMTGLNLMDKT 134
Query: 125 LLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC 184
L V+GARIS+SIW+V GD+++ DH+P+ACKD++AILFMFDLTSRCTL SV+ WY QARK
Sbjct: 135 LFVQGARISFSIWDVAGDSRSIDHVPIACKDAVAILFMFDLTSRCTLNSVLEWYSQARKW 194
Query: 185 NQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
NQTAIPI+IGTKFDDF+QLP +LQWTI +QARAYAKA+ ATLFFSSA +NINVNKI KFI
Sbjct: 195 NQTAIPILIGTKFDDFVQLPPNLQWTIVTQARAYAKAMKATLFFSSAKHNINVNKIFKFI 254
Query: 245 TAKLFDIPWTLERNLTIGEPIIDF 268
AKL ++PWT+ERNLTIGEPIIDF
Sbjct: 255 MAKLLNLPWTVERNLTIGEPIIDF 278
>gi|224126377|ref|XP_002319823.1| predicted protein [Populus trichocarpa]
gi|222858199|gb|EEE95746.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/264 (61%), Positives = 206/264 (78%), Gaps = 5/264 (1%)
Query: 5 NLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLVPGTT 64
++K I V + ++ W+K+L CS+GKP RYR L + SP P +E+G+ T+
Sbjct: 21 SIKWSILERVTVFKQFFHFIWDKILACSIGKPARYRRLTYRSC-SPPPEAIEAGV--ETS 77
Query: 65 VRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKT 124
+ + C D+D LV+LKISLLGDC IGKTSF+ KYVGDE+E+ GL++MDKT
Sbjct: 78 LEAASCRGFSK-DSD-LVSLKISLLGDCQIGKTSFVIKYVGDEQEKKCLEMTGLSLMDKT 135
Query: 125 LLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC 184
L V+GARIS+SIW+V GD+ + DH+P+ACKD++AILFMFDLTSRCTL +V+ WY QARK
Sbjct: 136 LFVQGARISFSIWDVAGDSSSLDHVPIACKDAVAILFMFDLTSRCTLNNVVEWYNQARKW 195
Query: 185 NQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
NQTAIPI+IGTKFDDF+QLP +LQWTI +QARAYAKA+ ATLFFSS+ +NINVNKI KFI
Sbjct: 196 NQTAIPILIGTKFDDFVQLPPNLQWTIVTQARAYAKAMKATLFFSSSKHNINVNKIFKFI 255
Query: 245 TAKLFDIPWTLERNLTIGEPIIDF 268
AKLF++PWT+ERNLT+GEPIIDF
Sbjct: 256 MAKLFNLPWTVERNLTVGEPIIDF 279
>gi|18403119|ref|NP_566690.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|21592655|gb|AAM64604.1| putative SGP1 monomeric G-protein [Arabidopsis thaliana]
gi|332643019|gb|AEE76540.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 291
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/271 (63%), Positives = 205/271 (75%), Gaps = 19/271 (7%)
Query: 15 LILRRCISCFWEKLLMCSVGKPIRY----RMLPRSTVTSPSPSVLES------------G 58
LILRR W +++ C+ GK RY R LP TV+ PSPS + +
Sbjct: 23 LILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGGGE 82
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKE-QGGSPGEG 117
V ++V +SHR D+D LV+LKISLLGD IGKTSFL KYVG+EKE + +G
Sbjct: 83 FVRRSSVVYDNDNSHRRSDSD-LVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKG 141
Query: 118 LNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW 177
+N DKTL + GARISYSIWE+ + +++D +PVACKDS+AILFMFDLTSRCTL SVI W
Sbjct: 142 INCTDKTLYMGGARISYSIWELEAE-RSRDQIPVACKDSVAILFMFDLTSRCTLNSVISW 200
Query: 178 YQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
YQQARK NQTAIP+++GTKFD+FIQLPIDLQWTIASQAR YAKALNATLFFSSA+YNINV
Sbjct: 201 YQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNINV 260
Query: 238 NKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
NKI KF+TAKLFD+PWT+ERNLTIGEPIIDF
Sbjct: 261 NKIFKFVTAKLFDLPWTVERNLTIGEPIIDF 291
>gi|224131576|ref|XP_002321122.1| predicted protein [Populus trichocarpa]
gi|222861895|gb|EEE99437.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/202 (76%), Positives = 174/202 (86%), Gaps = 1/202 (0%)
Query: 67 PSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
P +CH+H D+D LVALKISLLGDC IGKTSFL KYVG+EK++G GL +M KTL+
Sbjct: 7 PPICHNHHDNDSD-LVALKISLLGDCQIGKTSFLAKYVGNEKDEGVKHNNGLKLMKKTLM 65
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ 186
V+ ARISYS+WE+ GD + +PVACK S+AIL MFDLTSR TL SVIRWYQ+AR+ NQ
Sbjct: 66 VKDARISYSLWELDGDEGLEQQIPVACKGSVAILIMFDLTSRVTLNSVIRWYQEARRWNQ 125
Query: 187 TAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
TA+P+IIGTKFDDFIQLPIDLQWTIASQARAYAK LNATLFFSSATYNINVNKI KFITA
Sbjct: 126 TAVPVIIGTKFDDFIQLPIDLQWTIASQARAYAKVLNATLFFSSATYNINVNKIFKFITA 185
Query: 247 KLFDIPWTLERNLTIGEPIIDF 268
KLFD+PWTLERNLTIGEPIIDF
Sbjct: 186 KLFDLPWTLERNLTIGEPIIDF 207
>gi|449468350|ref|XP_004151884.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
gi|449526441|ref|XP_004170222.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
Length = 262
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/267 (62%), Positives = 201/267 (75%), Gaps = 17/267 (6%)
Query: 3 QFNLKRRIERGVLILRRCISCFWEKLLMC-SVGKPIRYRMLPRSTVTSPSPSVLESGLVP 61
+F L RR L+R F++ +L C S KP Y + S SV++ +P
Sbjct: 12 RFTLTRRNA-----LKRHACHFFDSILTCYSSKKPETYD----DAALASSASVVDQEFMP 62
Query: 62 GTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMM 121
T+ PSLCH+ +LV+LKISLLGD IGKT+FL KYVG+E ++ S GL +M
Sbjct: 63 -ETLTPSLCHN------PDLVSLKISLLGDSQIGKTTFLVKYVGNEMDEEKSEQTGLKLM 115
Query: 122 DKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA 181
DKTL+VRGARI YSIWEV GD K+QD++ ACK S+AIL+MFDLTSR TL + +RWY+QA
Sbjct: 116 DKTLMVRGARIYYSIWEVEGDTKSQDYISTACKGSVAILYMFDLTSRRTLNNTLRWYRQA 175
Query: 182 RKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
R+ NQTAIP++IGTKFDDFIQLPIDLQW IAS+ARAYAKALNATLFFSSATYNINVNKI
Sbjct: 176 RRWNQTAIPVLIGTKFDDFIQLPIDLQWAIASEARAYAKALNATLFFSSATYNINVNKIF 235
Query: 242 KFITAKLFDIPWTLERNLTIGEPIIDF 268
KFITAKLFD+PWT+ERNLTIGEPIIDF
Sbjct: 236 KFITAKLFDLPWTIERNLTIGEPIIDF 262
>gi|297830864|ref|XP_002883314.1| hypothetical protein ARALYDRAFT_479691 [Arabidopsis lyrata subsp.
lyrata]
gi|297329154|gb|EFH59573.1| hypothetical protein ARALYDRAFT_479691 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/272 (60%), Positives = 197/272 (72%), Gaps = 19/272 (6%)
Query: 15 LILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESG---------------- 58
LILRR W +++ C+ GK RY +L R+ +
Sbjct: 23 LILRRFTRLLWSRIVACTPGKSRRYLLLSRAVPSPTVSRPSPPPPIPAVDVDVVVVGGGG 82
Query: 59 -LVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKE-QGGSPGE 116
V ++V +SHR D+D LV+LKISLLGD IGKTSFL KYVG+EK + +
Sbjct: 83 EFVRRSSVVYDNDNSHRRSDSD-LVSLKISLLGDPEIGKTSFLAKYVGEEKGVEMRELEK 141
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
G+N DKTL + GARISYSIW++ G +++D +PVACKDS+AILFMFDLTSRCTL SVI
Sbjct: 142 GINCTDKTLYMGGARISYSIWDLEGAERSRDQIPVACKDSVAILFMFDLTSRCTLNSVIS 201
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
WYQQARK NQTAIP+++GTKFD+FIQLPIDLQWTIASQAR YAKALNATLFFSSA+YNIN
Sbjct: 202 WYQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQARTYAKALNATLFFSSASYNIN 261
Query: 237 VNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
VNKI KF+TAKLFD+PWT+ERNLTIGEPIIDF
Sbjct: 262 VNKIFKFVTAKLFDLPWTVERNLTIGEPIIDF 293
>gi|356553345|ref|XP_003545017.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 282
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 157/270 (58%), Positives = 202/270 (74%), Gaps = 9/270 (3%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCSV-GKPIRYRMLPRSTVTSPSPSVLESGL 59
+VQ +++ + V + W +L++CSV G P YR LP +S P+ ++
Sbjct: 20 IVQVDVRWGFLKRVSFVGHFFRFIWNRLVVCSVAGSPSHYRKLPLRDPSSSPPATVDD-- 77
Query: 60 VPGTTVRPSLCHSHRHLDAD-NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGL 118
V S + D+D +LV LKISLLGDCHIGKT+F+ KYVG+E+E+G EGL
Sbjct: 78 -----VFSSAATTTGGYDSDSDLVNLKISLLGDCHIGKTTFVIKYVGNEQEKGSLQMEGL 132
Query: 119 NMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWY 178
N+MDKTL V+GARIS+ IW+V GD ++ D +P+ACKD++AIL MFDLTSRCTL SV+ WY
Sbjct: 133 NLMDKTLSVQGARISFRIWDVAGDKRSLDQIPMACKDAVAILIMFDLTSRCTLNSVVGWY 192
Query: 179 QQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
+ARK NQTAIPI+IGTKFDDF++LP D+QWTIA+QARAYA+A+ ATLFFSSAT+NINVN
Sbjct: 193 SEARKWNQTAIPILIGTKFDDFVRLPPDVQWTIATQARAYARAMKATLFFSSATHNINVN 252
Query: 239 KILKFITAKLFDIPWTLERNLTIGEPIIDF 268
KI KFI AKLF++PWT+ERNL +GEPIIDF
Sbjct: 253 KIFKFIMAKLFNLPWTVERNLRVGEPIIDF 282
>gi|356501505|ref|XP_003519565.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 282
Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/246 (63%), Positives = 191/246 (77%), Gaps = 9/246 (3%)
Query: 25 WEKLLMCSV-GKPIRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDAD-NLV 82
W +LL+CSV G+P +YR LP +S PS + TT D+D +LV
Sbjct: 44 WNRLLVCSVAGRPSQYRKLPVRDPSSSPPSYADDVFFSATTTTGGY-------DSDSDLV 96
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
LKISLLGDCHIGKT+F+ KYVG+E+E+ EGLN+MDKTL V+GARIS+ IW+V GD
Sbjct: 97 NLKISLLGDCHIGKTTFVIKYVGNEQEKRSLQMEGLNLMDKTLSVQGARISFRIWDVAGD 156
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ 202
++ D +P+ACKDS+AIL MFDLTSRCTL SV+ WY +ARK NQTAIPI+IGTKFDDF++
Sbjct: 157 KRSLDQIPMACKDSVAILIMFDLTSRCTLNSVVGWYSEARKWNQTAIPILIGTKFDDFVR 216
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
LP D+QWTI +QARAYA+A+ ATLFFSSAT+NINVNKI KFI AKLF++PWT+ERNL +G
Sbjct: 217 LPPDVQWTIVTQARAYARAMKATLFFSSATHNINVNKIFKFIMAKLFNLPWTVERNLRVG 276
Query: 263 EPIIDF 268
EPIIDF
Sbjct: 277 EPIIDF 282
>gi|147838102|emb|CAN60928.1| hypothetical protein VITISV_008356 [Vitis vinifera]
gi|302142871|emb|CBI20166.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/270 (60%), Positives = 208/270 (77%), Gaps = 9/270 (3%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRY-RMLPRSTVTSPSPSVLESGL 59
+V+ N++ RI V I ++ W+++++CS+GKPIRY R+ RS SPSP +ESGL
Sbjct: 15 IVRVNIRVRILDRVTIFQKFFRFIWDRIIVCSIGKPIRYHRLSRRSPPPSPSPETIESGL 74
Query: 60 VPGTTVRPSLCHSHRHLDAD-NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGL 118
+ PS D+D +LV+LKI ++GDC IGKTSFL KYVGDE+E+ GL
Sbjct: 75 ---QSDDPSTAAG----DSDSDLVSLKICVMGDCQIGKTSFLIKYVGDEQEKKCLEMTGL 127
Query: 119 NMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWY 178
N+MDKTL+V+ ARI++SIW+V GD + H+P+ACKD++AILFMFDLTSRCTL SVI WY
Sbjct: 128 NLMDKTLIVQDARIAFSIWDVGGDHTSLTHVPIACKDAVAILFMFDLTSRCTLNSVIGWY 187
Query: 179 QQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
QAR+ NQTAIPI+IGTKFDDF++LP DLQ I +QAR YA+A+ ATLFFSSAT+NINVN
Sbjct: 188 SQARRWNQTAIPIMIGTKFDDFVKLPPDLQRPIVTQARGYARAMKATLFFSSATHNINVN 247
Query: 239 KILKFITAKLFDIPWTLERNLTIGEPIIDF 268
KI KFI AKLF++PWT++RNLTIGEPIIDF
Sbjct: 248 KIFKFIMAKLFNLPWTVQRNLTIGEPIIDF 277
>gi|225461736|ref|XP_002285529.1| PREDICTED: septum-promoting GTP-binding protein 1 [Vitis vinifera]
Length = 282
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/270 (60%), Positives = 208/270 (77%), Gaps = 9/270 (3%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRY-RMLPRSTVTSPSPSVLESGL 59
+V+ N++ RI V I ++ W+++++CS+GKPIRY R+ RS SPSP +ESGL
Sbjct: 20 IVRVNIRVRILDRVTIFQKFFRFIWDRIIVCSIGKPIRYHRLSRRSPPPSPSPETIESGL 79
Query: 60 VPGTTVRPSLCHSHRHLDAD-NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGL 118
+ PS D+D +LV+LKI ++GDC IGKTSFL KYVGDE+E+ GL
Sbjct: 80 ---QSDDPSTAAG----DSDSDLVSLKICVMGDCQIGKTSFLIKYVGDEQEKKCLEMTGL 132
Query: 119 NMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWY 178
N+MDKTL+V+ ARI++SIW+V GD + H+P+ACKD++AILFMFDLTSRCTL SVI WY
Sbjct: 133 NLMDKTLIVQDARIAFSIWDVGGDHTSLTHVPIACKDAVAILFMFDLTSRCTLNSVIGWY 192
Query: 179 QQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
QAR+ NQTAIPI+IGTKFDDF++LP DLQ I +QAR YA+A+ ATLFFSSAT+NINVN
Sbjct: 193 SQARRWNQTAIPIMIGTKFDDFVKLPPDLQRPIVTQARGYARAMKATLFFSSATHNINVN 252
Query: 239 KILKFITAKLFDIPWTLERNLTIGEPIIDF 268
KI KFI AKLF++PWT++RNLTIGEPIIDF
Sbjct: 253 KIFKFIMAKLFNLPWTVQRNLTIGEPIIDF 282
>gi|356567378|ref|XP_003551897.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 284
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/249 (63%), Positives = 191/249 (76%), Gaps = 14/249 (5%)
Query: 25 WEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLV-----PGTTVRPSLCHSHRHLDAD 79
W+++L+CS+G+P Y LP + P P G P TT PS C S D+D
Sbjct: 45 WDRMLLCSLGRP-SYLRLP---LRDPPPQATVHGGASMHGYPFTTTTPSPCDS----DSD 96
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
LV LKISLLGDCHIGKTSF+ KYVGDE+E+ +GLN+MDKTL V+GARIS+SIW+V
Sbjct: 97 -LVNLKISLLGDCHIGKTSFVIKYVGDEQEKRSLQMKGLNLMDKTLFVQGARISFSIWDV 155
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
GD + +P+ACKDS+AIL MFDLTSRCTL SV+ WY +ARK NQ AIPI+IGTKFDD
Sbjct: 156 AGDTGSLYQIPMACKDSVAILIMFDLTSRCTLNSVVGWYSKARKWNQIAIPILIGTKFDD 215
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F++LP D+QWTI +QARAYA+A+NATLFFSSAT+NINVNKI KFI AKLF++PW +ERNL
Sbjct: 216 FVKLPPDVQWTIVTQARAYARAMNATLFFSSATHNINVNKIFKFIMAKLFNLPWKVERNL 275
Query: 260 TIGEPIIDF 268
T+GEP IDF
Sbjct: 276 TLGEPTIDF 284
>gi|357494385|ref|XP_003617481.1| Ras-related protein Rab-37 [Medicago truncatula]
gi|355518816|gb|AET00440.1| Ras-related protein Rab-37 [Medicago truncatula]
Length = 289
Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 157/277 (56%), Positives = 204/277 (73%), Gaps = 15/277 (5%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCSVGK-PIRYR-------MLPRSTVTSPSP 52
+VQ ++K + + V + + W KL++CSVG+ P +YR S+ SPSP
Sbjct: 19 IVQVDVKYGMLQRVSFVGQFFRFIWNKLMVCSVGRSPAQYRRLSLNHSSASSSSSLSPSP 78
Query: 53 SVLESGLVPGTTVRPSLCHSHRHLDAD-NLVALKISLLGDCHIGKTSFLEKYVGDEKEQG 111
+ ++ G H++ ++D +LV LKISLLGDCHIGKT+FL KYVG+E E+
Sbjct: 79 ATVDDGFTREQQ------HTNNGYESDSDLVNLKISLLGDCHIGKTTFLIKYVGNEVEKR 132
Query: 112 GSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTL 171
EGLN+MDKTL V+GARIS+ IW+V GD K+ D +P+ACKD++A+L MFDLTSR TL
Sbjct: 133 SLQMEGLNLMDKTLYVQGARISFCIWDVAGDKKSLDQIPMACKDAVALLIMFDLTSRSTL 192
Query: 172 KSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSA 231
+V+ WY +ARK NQTAIPI+IGTKFDDF++LP DLQWTI +QARAYA+A+ ATLFFSSA
Sbjct: 193 NNVVGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIVTQARAYARAMKATLFFSSA 252
Query: 232 TYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
T+NINVNKI KFI AKLF++PWT+ERNL +GEPIIDF
Sbjct: 253 THNINVNKIFKFIMAKLFNLPWTIERNLKVGEPIIDF 289
>gi|125600478|gb|EAZ40054.1| hypothetical protein OsJ_24495 [Oryza sativa Japonica Group]
Length = 313
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 172/190 (90%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+++V+LK+SLLGDC IGKTSF+ KYVGD++EQ G GLN+MDKTL VRGARI++SIW+
Sbjct: 124 EDVVSLKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWD 183
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
V GD++ DH+P+ACKD++AIL+MFDLTSRCTL +VI WY++ARK N+TAIPI+IGTKFD
Sbjct: 184 VAGDSQFLDHVPIACKDAVAILYMFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFD 243
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
DF QLP+++QWTI ++ARAYA+A+ ATLFFSS+T+NINVNKI KFITAKLF++PWT+ERN
Sbjct: 244 DFAQLPLEMQWTIVNEARAYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERN 303
Query: 259 LTIGEPIIDF 268
LT+GEPIIDF
Sbjct: 304 LTVGEPIIDF 313
>gi|33146727|dbj|BAC79616.1| putative Septum-promoting GTP-binding protein 1 (GTPase spg1)
[Oryza sativa Japonica Group]
Length = 297
Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 172/190 (90%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+++V+LK+SLLGDC IGKTSF+ KYVGD++EQ G GLN+MDKTL VRGARI++SIW+
Sbjct: 108 EDVVSLKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWD 167
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
V GD++ DH+P+ACKD++AIL+MFDLTSRCTL +VI WY++ARK N+TAIPI+IGTKFD
Sbjct: 168 VAGDSQFLDHVPIACKDAVAILYMFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFD 227
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
DF QLP+++QWTI ++ARAYA+A+ ATLFFSS+T+NINVNKI KFITAKLF++PWT+ERN
Sbjct: 228 DFAQLPLEMQWTIVNEARAYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERN 287
Query: 259 LTIGEPIIDF 268
LT+GEPIIDF
Sbjct: 288 LTVGEPIIDF 297
>gi|218199739|gb|EEC82166.1| hypothetical protein OsI_26241 [Oryza sativa Indica Group]
Length = 313
Score = 302 bits (774), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 172/190 (90%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+++V+LK+SLLGDC IGKTSF+ KYVGD++EQ G GLN+MDKTL VRGARI++SIW+
Sbjct: 124 EDVVSLKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWD 183
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
V GD++ DH+P+ACKD++AIL+MFDLTSRCTL +VI WY++ARK N+TAIPI+IGTKFD
Sbjct: 184 VAGDSQFLDHVPIACKDAVAILYMFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFD 243
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
DF QLP+++QWTI ++ARAYA+A+ ATLFFSS+T+NINVNKI KFITAKLF++PWT+ERN
Sbjct: 244 DFAQLPLEMQWTIVNEARAYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERN 303
Query: 259 LTIGEPIIDF 268
LT+GEPIIDF
Sbjct: 304 LTVGEPIIDF 313
>gi|255648030|gb|ACU24471.1| unknown [Glycine max]
Length = 289
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 192/253 (75%), Gaps = 20/253 (7%)
Query: 25 WEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHL-------- 76
W+++L+CS+G+P R+ R SP P+ + G G ++ H H
Sbjct: 48 WDRILLCSLGRPSYLRLPLRD---SPPPATVNGG---GGSL-----HGHPFTTTTTTIPC 96
Query: 77 DAD-NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
D+D +LV LKISLLGDCHIGKTSF+ KYVGDE+E+ +GLN+MDKTL V+GARIS+S
Sbjct: 97 DSDSDLVNLKISLLGDCHIGKTSFVIKYVGDEQEKRSLQMKGLNLMDKTLFVQGARISFS 156
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGT 195
IW+V GD + +P+ACKDS+AIL MFDLTSRCTL SV+ WY +ARK NQTAIPI+IGT
Sbjct: 157 IWDVAGDPGSICQIPMACKDSVAILIMFDLTSRCTLNSVVGWYSKARKWNQTAIPILIGT 216
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
KFDDF++LP D+QWTI +QARAYA+A+ ATLFFSSA++NINVNKI KFI AKLF++PW +
Sbjct: 217 KFDDFVKLPPDVQWTIVTQARAYARAMKATLFFSSASHNINVNKIFKFIMAKLFNLPWKV 276
Query: 256 ERNLTIGEPIIDF 268
ERNLT+GEP IDF
Sbjct: 277 ERNLTLGEPTIDF 289
>gi|414886932|tpg|DAA62946.1| TPA: hypothetical protein ZEAMMB73_463136 [Zea mays]
Length = 308
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 136/190 (71%), Positives = 169/190 (88%), Gaps = 1/190 (0%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKE-QGGSPGEGLNMMDKTLLVRGARISYSIWE 138
N+V+LK+SLLGDC IGKTSF+ KYVGD+ E Q G GLN+MDK + VRGA+I+YSIW+
Sbjct: 119 NVVSLKVSLLGDCQIGKTSFMVKYVGDDGEDQNGLQMTGLNLMDKMMAVRGAKIAYSIWD 178
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
V GD ++ DH+P+ACKD++AIL+MFDLTSRCTL +++ WY++ARK N+TAIPI+IGTKFD
Sbjct: 179 VAGDHQSVDHIPIACKDAVAILYMFDLTSRCTLNNIVDWYERARKWNKTAIPILIGTKFD 238
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
DF QLP+++QWTI +QARAYA+A+ ATLFFSSAT+NINVNKI KFITAKLFD+PWT+ERN
Sbjct: 239 DFAQLPLEMQWTIVNQARAYARAMKATLFFSSATHNINVNKIFKFITAKLFDLPWTVERN 298
Query: 259 LTIGEPIIDF 268
LTIGEPIIDF
Sbjct: 299 LTIGEPIIDF 308
>gi|226499814|ref|NP_001151110.1| septum-promoting GTP-binding protein 1 [Zea mays]
gi|195644366|gb|ACG41651.1| septum-promoting GTP-binding protein 1 [Zea mays]
gi|414590446|tpg|DAA41017.1| TPA: septum-promoting GTP-binding protein 1 [Zea mays]
Length = 300
Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 136/190 (71%), Positives = 169/190 (88%), Gaps = 1/190 (0%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDE-KEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
N+V+LK+SLLGDC IGKTSF+ KYVGD+ +EQ G GLN+MDKT+ VRGARI+YSIW+
Sbjct: 111 NVVSLKVSLLGDCQIGKTSFMVKYVGDDGEEQNGLQMTGLNLMDKTMPVRGARIAYSIWD 170
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
V GD ++ DH+P+ACKD++AIL+MFDLTSRCTL +++ WY +ARK N+TAIPI+IGTKFD
Sbjct: 171 VAGDHQSVDHVPIACKDAVAILYMFDLTSRCTLNNIVDWYGRARKWNKTAIPILIGTKFD 230
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
DF QLP+++QW I +QARAYA+A+ ATLFFSSAT+NINVNKI KFITAKLF++PWT+ERN
Sbjct: 231 DFAQLPLEMQWAIVNQARAYARAMKATLFFSSATHNINVNKIFKFITAKLFNLPWTVERN 290
Query: 259 LTIGEPIIDF 268
LTIGEPIIDF
Sbjct: 291 LTIGEPIIDF 300
>gi|357116750|ref|XP_003560141.1| PREDICTED: septum-promoting GTP-binding protein 1-like
[Brachypodium distachyon]
Length = 305
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 133/193 (68%), Positives = 172/193 (89%), Gaps = 1/193 (0%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDE-KEQGGSPGEGLNMMDKTLLVRGARISYS 135
+ +++V LK+SLLGDC IGKTSF+ KYVGD+ +EQ G GLN+MDKTL VRGAR++++
Sbjct: 113 EVEDVVGLKVSLLGDCQIGKTSFMVKYVGDDGEEQNGLQMTGLNLMDKTLAVRGARLAFN 172
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGT 195
IW+V GD+++ DH+P+ACKD++AILFMFDLTSRCTL + I W+++ARK N+TAIPI+IGT
Sbjct: 173 IWDVAGDSQSIDHVPIACKDAVAILFMFDLTSRCTLNNTIDWHERARKWNKTAIPILIGT 232
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
KFDDF QLP+++QWTI ++ARAYA+A+ ATLFFSSAT+NINVNKI KFITAKLF++PWT+
Sbjct: 233 KFDDFAQLPLEMQWTIVNEARAYARAMKATLFFSSATHNINVNKIFKFITAKLFNLPWTV 292
Query: 256 ERNLTIGEPIIDF 268
ERNLT+GEPIIDF
Sbjct: 293 ERNLTVGEPIIDF 305
>gi|356530655|ref|XP_003533896.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 310
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/249 (61%), Positives = 188/249 (75%), Gaps = 12/249 (4%)
Query: 25 WEKLLMCSVGKP-----IRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDAD 79
W+++L+CS+G+P P +TV S+ TT P C S D+D
Sbjct: 69 WDRILLCSLGRPSYLRLPLRDPPPPATVNGGGGSLHGHPFTTTTTTIP--CDS----DSD 122
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
LV LKISLLGDCHIGKTSF+ KYVGDE+E+ +GLN+MDKTL V+GARIS+SIW+V
Sbjct: 123 -LVNLKISLLGDCHIGKTSFVIKYVGDEQEKRSLQMKGLNLMDKTLFVQGARISFSIWDV 181
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
GD + +P+ACKDS+AIL MFDLTSRCTL SV+ WY +ARK NQTAIPI+IGTKFDD
Sbjct: 182 AGDPGSICQIPMACKDSVAILIMFDLTSRCTLNSVVGWYSKARKWNQTAIPILIGTKFDD 241
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F++LP D+QWTI +QARAYA+A+ ATLFFSSA++NINVNKI KFI AKLF++PW +ERNL
Sbjct: 242 FVKLPPDVQWTIVTQARAYARAMKATLFFSSASHNINVNKIFKFIMAKLFNLPWKVERNL 301
Query: 260 TIGEPIIDF 268
T+GEP IDF
Sbjct: 302 TLGEPTIDF 310
>gi|449449613|ref|XP_004142559.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
gi|449485370|ref|XP_004157147.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Cucumis
sativus]
Length = 308
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 192/262 (73%), Gaps = 6/262 (2%)
Query: 8 RRIERGVLILRRCISCFWEKLLMCSVGK-PIRYRMLPRSTVTSPSPSVLESGLVPGTTVR 66
R +ER V ++R W++L CS G P +YR LP + P+ + G P
Sbjct: 52 RLLER-VSLVRHFFRLVWDRLFACSSGTTPKKYRRLPSRSPPPPT----DGGSSPDQPTT 106
Query: 67 PSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
S D+ +LV+LKISLLGDC IGKTSF+ KYVGDE+E+ G+N+M+KTL
Sbjct: 107 SGGFDSDFDFDSADLVSLKISLLGDCQIGKTSFVIKYVGDEQERNSLQMSGINLMNKTLN 166
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ 186
++ A IS+ IW+V GD+ +QD LP+ACKD++AILFMFDLTSR TL SV+ WY +ARK NQ
Sbjct: 167 IQNALISFCIWDVKGDSSSQDQLPLACKDAVAILFMFDLTSRRTLNSVVDWYTEARKWNQ 226
Query: 187 TAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
TAIPI+IGTKFDDF++LP +LQWTI SQARAYA+ + ATLFFSS+ +NINVNKI KFI A
Sbjct: 227 TAIPILIGTKFDDFVRLPPNLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAA 286
Query: 247 KLFDIPWTLERNLTIGEPIIDF 268
KLFDIPW++ERNLTIGEPIIDF
Sbjct: 287 KLFDIPWSIERNLTIGEPIIDF 308
>gi|297796357|ref|XP_002866063.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
gi|297311898|gb|EFH42322.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
Length = 288
Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 151/271 (55%), Positives = 191/271 (70%), Gaps = 6/271 (2%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCS--VGKPIRYRMLPRSTVTSPSPSVLESG 58
+V N+K RI V I W K++ CS + KPI YR + ++S + + +
Sbjct: 19 IVHVNIKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYRQIVHR-ISSTAGDIFDGD 77
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGL 118
T S D+D LV+LKISLLGDC GKT+F+ KYVGDE QG GL
Sbjct: 78 DDTATEHTVSTRRFGSGSDSD-LVSLKISLLGDCQTGKTTFVIKYVGDE-NQGFLEMTGL 135
Query: 119 NMMDKTLLVRGARISYSIWEVTGDAK-AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW 177
N+MDKT V+G IS+SIW+V GD K ++DH+P+ACKD++AILFMFDLTSR TL V W
Sbjct: 136 NLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAILFMFDLTSRSTLNRVFGW 195
Query: 178 YQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
Y QARK N+TAIPI+IGTKFDDF++LP +LQWTI +QARAYAK + A+LFFSSAT+NINV
Sbjct: 196 YSQARKWNKTAIPILIGTKFDDFVRLPPNLQWTIVTQARAYAKVMKASLFFSSATHNINV 255
Query: 238 NKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
NKI KFI AKLF++PW ++RNLT+GEPIID+
Sbjct: 256 NKIFKFILAKLFNLPWKIDRNLTLGEPIIDY 286
>gi|15239761|ref|NP_200295.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|5824341|emb|CAB54517.1| SGP1 monomeric G-protein [Arabidopsis thaliana]
gi|9758264|dbj|BAB08763.1| SGP1 monomeric G-protein [Arabidopsis thaliana]
gi|332009163|gb|AED96546.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 288
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 192/274 (70%), Gaps = 12/274 (4%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCS--VGKPIRYRMLPRSTVTSPSPSVLESG 58
+V N K RI V I W K++ CS + KPI YR + ++S + + +
Sbjct: 19 IVHVNRKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYRRIVHK-ISSTAGDIFDGD 77
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVAL---KISLLGDCHIGKTSFLEKYVGDEKEQGGSPG 115
TT P++ S R + + L KISLLGDC GKT+F+ KYVGDE Q
Sbjct: 78 --DDTTTEPTV--SGRRFGSSSDSDLVSLKISLLGDCQTGKTTFVVKYVGDE-NQSFLEM 132
Query: 116 EGLNMMDKTLLVRGARISYSIWEVTGDAK-AQDHLPVACKDSIAILFMFDLTSRCTLKSV 174
GLN+MDKT V+G IS+SIW+V GD K ++DH+P+ACKD++AILFMFDLTSR TL SV
Sbjct: 133 TGLNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAILFMFDLTSRSTLNSV 192
Query: 175 IRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYN 234
WY QARK N+TAIPI+IGTKFDDF++LP +LQWTI +QARAYAK +NA+LFFSSAT+N
Sbjct: 193 FGWYSQARKWNKTAIPILIGTKFDDFVRLPPNLQWTIVTQARAYAKVMNASLFFSSATHN 252
Query: 235 INVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
INVNKI KFI A+LF++PW ++RNLT+GEPIID+
Sbjct: 253 INVNKIFKFILARLFNLPWKIDRNLTLGEPIIDY 286
>gi|255564003|ref|XP_002523001.1| sgp1 monomeric G-protein, putative [Ricinus communis]
gi|223537813|gb|EEF39431.1| sgp1 monomeric G-protein, putative [Ricinus communis]
Length = 245
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/268 (54%), Positives = 179/268 (66%), Gaps = 33/268 (12%)
Query: 2 VQFNLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLVP 61
+ +K I V + R+ W+++L CS+GKP+RYR L R +SP P +E+G
Sbjct: 10 LHVTIKWSILERVSVFRQFFQFIWDRILACSIGKPVRYRRLTRQP-SSPPPEAIEAG--- 65
Query: 62 GTTVRPSLCHSHRHLDAD-NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNM 120
G L +AD +LV LKISLLGDC IGKTSF+ KYVGDE+E+ GLN+
Sbjct: 66 GFAPSEELSSRFSGYNADSDLVPLKISLLGDCRIGKTSFVVKYVGDEQEKKCLEMTGLNL 125
Query: 121 MDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ 180
MDKTL V+GARI++SIW+V GD+++ DH+P+ACKD++AILFMFDLTSRCTL SV+ WY Q
Sbjct: 126 MDKTLFVQGARITFSIWDVGGDSRSLDHVPIACKDAVAILFMFDLTSRCTLNSVVEWYSQ 185
Query: 181 ARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
ARK NQ ARAYAKA+ ATLFFSSA +NINVNKI
Sbjct: 186 ARKWNQ----------------------------ARAYAKAMKATLFFSSAKHNINVNKI 217
Query: 241 LKFITAKLFDIPWTLERNLTIGEPIIDF 268
KFI AKLF++PWTLERNLTIGEPIIDF
Sbjct: 218 FKFIMAKLFNLPWTLERNLTIGEPIIDF 245
>gi|115472433|ref|NP_001059815.1| Os07g0522900 [Oryza sativa Japonica Group]
gi|113611351|dbj|BAF21729.1| Os07g0522900, partial [Oryza sativa Japonica Group]
Length = 168
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/167 (71%), Positives = 151/167 (90%)
Query: 102 KYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILF 161
KYVGD++EQ G GLN+MDKTL VRGARI++SIW+V GD++ DH+P+ACKD++AIL+
Sbjct: 2 KYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWDVAGDSQFLDHVPIACKDAVAILY 61
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLTSRCTL +VI WY++ARK N+TAIPI+IGTKFDDF QLP+++QWTI ++ARAYA+A
Sbjct: 62 MFDLTSRCTLTNVIDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWTIVNEARAYARA 121
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
+ ATLFFSS+T+NINVNKI KFITAKLF++PWT+ERNLT+GEPIIDF
Sbjct: 122 MKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERNLTVGEPIIDF 168
>gi|242045844|ref|XP_002460793.1| hypothetical protein SORBIDRAFT_02g034970 [Sorghum bicolor]
gi|241924170|gb|EER97314.1| hypothetical protein SORBIDRAFT_02g034970 [Sorghum bicolor]
Length = 154
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 112/152 (73%), Positives = 140/152 (92%)
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
GLN+MDKT+ VRGARI+YSIW+V GD ++ DH+P+ACKD++AIL+MFDLTSRCTL +++
Sbjct: 3 GLNLMDKTMAVRGARIAYSIWDVAGDHQSVDHIPIACKDAVAILYMFDLTSRCTLNNIVD 62
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
WY++ARK N+TAIPI+IGTKFDDF QLP+++QW I +QARAYA+A+ ATLFFSSAT+NIN
Sbjct: 63 WYERARKWNKTAIPILIGTKFDDFAQLPLEMQWAIVNQARAYARAMKATLFFSSATHNIN 122
Query: 237 VNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
VNKI KFITAKLF++PWT+ERNLTIGEPIIDF
Sbjct: 123 VNKIFKFITAKLFNLPWTVERNLTIGEPIIDF 154
>gi|147770661|emb|CAN66740.1| hypothetical protein VITISV_021643 [Vitis vinifera]
Length = 204
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/196 (63%), Positives = 139/196 (70%), Gaps = 45/196 (22%)
Query: 74 RHLDAD-NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARI 132
R D D +LVALKISLLGDC IGKTSF
Sbjct: 53 RERDKDSDLVALKISLLGDCQIGKTSF--------------------------------- 79
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII 192
V GD KA +H+P+ACKDS+AIL+MFDLTS SVI WY QARK NQ AIP++
Sbjct: 80 ------VVGDEKAHNHIPMACKDSVAILYMFDLTS-----SVISWYHQARKWNQNAIPVL 128
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
IGTKFDDFIQLPIDLQWT+ASQARAYAKALNATLFFSSATYNINVNKI KFITAKLF++P
Sbjct: 129 IGTKFDDFIQLPIDLQWTVASQARAYAKALNATLFFSSATYNINVNKIFKFITAKLFNLP 188
Query: 253 WTLERNLTIGEPIIDF 268
WT+ERNLT+GEP+IDF
Sbjct: 189 WTVERNLTVGEPMIDF 204
>gi|30686347|ref|NP_850621.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|332643020|gb|AEE76541.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 248
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 153/217 (70%), Gaps = 19/217 (8%)
Query: 15 LILRRCISCFWEKLLMCSVGKPIRY----RMLPRSTVTSPSPSVLES------------G 58
LILRR W +++ C+ GK RY R LP TV+ PSPS + +
Sbjct: 23 LILRRFTRLLWSRIVACTPGKSRRYLLLSRALPSPTVSRPSPSPIPAVDVVVGGGGGGGE 82
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKE-QGGSPGEG 117
V ++V +SHR D+D LV+LKISLLGD IGKTSFL KYVG+EKE + +G
Sbjct: 83 FVRRSSVVYDNDNSHRRSDSD-LVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKG 141
Query: 118 LNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW 177
+N DKTL + GARISYSIWE+ + +++D +PVACKDS+AILFMFDLTSRCTL SVI W
Sbjct: 142 INCTDKTLYMGGARISYSIWELEAE-RSRDQIPVACKDSVAILFMFDLTSRCTLNSVISW 200
Query: 178 YQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQ 214
YQQARK NQTAIP+++GTKFD+FIQLPIDLQWTIASQ
Sbjct: 201 YQQARKSNQTAIPVMVGTKFDEFIQLPIDLQWTIASQ 237
>gi|326502398|dbj|BAJ95262.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 240
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 117/139 (84%), Gaps = 1/139 (0%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQ-GGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+V LK+SLLGDC IGKTSF+ KYVGD +EQ GG GLN+MDKTL VRGAR++++IW+V
Sbjct: 101 VVGLKVSLLGDCQIGKTSFMVKYVGDGEEQNGGLQMTGLNLMDKTLAVRGARLAFNIWDV 160
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
GD+++ DH+P+ACKD++AILFMFDLTSRCTL ++ WY++ARK N+TAIPI+IGTKFDD
Sbjct: 161 AGDSQSADHVPIACKDAVAILFMFDLTSRCTLNNITDWYERARKWNKTAIPILIGTKFDD 220
Query: 200 FIQLPIDLQWTIASQARAY 218
F QLP+++QWTI Q +
Sbjct: 221 FAQLPLEMQWTIVDQVLQF 239
>gi|302762863|ref|XP_002964853.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300167086|gb|EFJ33691.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 306
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 142/231 (61%), Gaps = 10/231 (4%)
Query: 38 RYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKT 97
R + P +T +P PS P V S C D +V +K+ ++GDC GKT
Sbjct: 86 RLEIFPHATAHAPKPSQ------PSDDVHES-CGLKVAYGEDTVV-VKVGIVGDCQTGKT 137
Query: 98 SFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSI 157
S ++ YV ++ G G+N MDK L + A+I+ SIWE+ G K+ +P C D+
Sbjct: 138 SLMQNYVVGDRSNGDESIFGVNAMDKVLDIHVAKIALSIWELGGYKKSM--VPAVCNDAA 195
Query: 158 AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARA 217
AIL +FDLT R TL SV +W+ AR+CNQ AIP+++GTKFD FI++P L+ I QAR
Sbjct: 196 AILILFDLTRRTTLHSVKQWFMLARQCNQGAIPVLVGTKFDQFIKMPEGLKSLITKQARL 255
Query: 218 YAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
YA+A+ A L F+S YNINV+K+ K + A++FD+P + RNLT GEP++ +
Sbjct: 256 YAQAMGAPLLFTSTPYNINVHKVFKIVLARIFDLPCNISRNLTPGEPLVVY 306
>gi|356517630|ref|XP_003527490.1| PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine
max]
Length = 107
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/107 (84%), Positives = 100/107 (93%)
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLTSR TL SV+ WY++ARK NQTAIP++IGTKFDDFIQLPIDLQWTIA++AR YAKA
Sbjct: 1 MFDLTSRRTLNSVVGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDLQWTIANEARKYAKA 60
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
LNATLFFSSATYNINVNKI KFITAKLFD+PWT+ERNL +GEPIIDF
Sbjct: 61 LNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLPVGEPIIDF 107
>gi|302756715|ref|XP_002961781.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300170440|gb|EFJ37041.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 306
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 142/231 (61%), Gaps = 10/231 (4%)
Query: 38 RYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKT 97
R + P +T +P PS P V S C D +V +K+ ++GDC GKT
Sbjct: 86 RLEIFPHATAHAPKPSQ------PSDDVHES-CGLKVAYGEDTVV-VKVGIVGDCQTGKT 137
Query: 98 SFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSI 157
S ++ YV ++ G G+N MDK L + A+I+ SIWE+ G K+ +P C D+
Sbjct: 138 SLMQNYVVGDRSNGDESIFGVNAMDKVLDIHVAKIALSIWELGGYKKSM--VPAVCNDAA 195
Query: 158 AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARA 217
AIL +FDLT R TL SV +W+ AR+CNQ AIP+++GTKFD FI++P L+ I QAR
Sbjct: 196 AILILFDLTRRTTLHSVKQWFMLARQCNQGAIPVLVGTKFDQFIKMPEGLKSLITKQARL 255
Query: 218 YAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
YA+A+ A L F+S YNINV+K+ K + A++FD+P + RNLT GEP++ +
Sbjct: 256 YAQAMGAPLLFTSTPYNINVHKVFKIVLARIFDLPCNISRNLTPGEPLVVY 306
>gi|255566385|ref|XP_002524178.1| sgp1 monomeric G-protein, putative [Ricinus communis]
gi|223536547|gb|EEF38193.1| sgp1 monomeric G-protein, putative [Ricinus communis]
Length = 196
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 130/180 (72%), Gaps = 8/180 (4%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCSVGKPIRYRMLP-RSTVTSPSPSVLESGL 59
MVQF L ++I+R ILRRCI W ++LMCS+GKPI+Y MLP R TV +P +++ +
Sbjct: 1 MVQFCLGKKIQRRFSILRRCILRAWNQILMCSLGKPIQYHMLPHRLTVPTPVATIVPTSG 60
Query: 60 VPGTTVRPS-----LCHSHR-HLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGS 113
++ S +C SH H D+D LVALKISLLGDC IGKTSFL KYVG+EKE+ G
Sbjct: 61 SVSSSPTSSPPPPPMCVSHHDHKDSD-LVALKISLLGDCQIGKTSFLAKYVGNEKEEKGM 119
Query: 114 PGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKS 173
G+NMMDKTL+V+GARISY++WEV GD ++ +PVACKDS+AIL MFDLTSR TL
Sbjct: 120 LKGGMNMMDKTLMVKGARISYNLWEVDGDEGSRGQIPVACKDSVAILIMFDLTSRVTLNG 179
>gi|242044408|ref|XP_002460075.1| hypothetical protein SORBIDRAFT_02g022380 [Sorghum bicolor]
gi|241923452|gb|EER96596.1| hypothetical protein SORBIDRAFT_02g022380 [Sorghum bicolor]
Length = 139
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query: 102 KYVGDE-KEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAIL 160
KYVGD+ +EQ G GLN+MDKT+ VRGARI+YSIW+V GD ++ DH+P+ACKD++AIL
Sbjct: 8 KYVGDDGEEQNGLQMTGLNLMDKTMAVRGARIAYSIWDVAGDHQSVDHIPIACKDAVAIL 67
Query: 161 FMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAK 220
+MFDLTSRC L +++ WY++ARK N+TAIPI+IGTKFDDF QLP+++QW I +QARAYA+
Sbjct: 68 YMFDLTSRCMLNNIVDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWAIVNQARAYAR 127
Query: 221 ALNATL 226
A+ ATL
Sbjct: 128 AMKATL 133
>gi|212529950|ref|XP_002145132.1| GTP binding protein (SPG1), putative [Talaromyces marneffei ATCC
18224]
gi|210074530|gb|EEA28617.1| GTP binding protein (SPG1), putative [Talaromyces marneffei ATCC
18224]
Length = 332
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 141/231 (61%), Gaps = 1/231 (0%)
Query: 37 IRYRMLPRSTVTSPSPSVLESGLVPG-TTVRPSLCHSHRHLDADNLVALKISLLGDCHIG 95
+ Y+ P+ +V+ P + G G + +P + + N V +K+ ++GD IG
Sbjct: 97 MSYQQNPQQSVSRPGSGLSSGGERYGYPSSQPEQSQKQVAVPSKNSVVIKVGMVGDAQIG 156
Query: 96 KTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKD 155
KTS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D
Sbjct: 157 KTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCND 216
Query: 156 SIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQA 215
++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D F+ P + Q I+ QA
Sbjct: 217 AVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFVNFPREDQEEISLQA 276
Query: 216 RAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ YAKA+ A+L FSS +++INV KI K + +K FD+ T+ IGEP++
Sbjct: 277 KRYAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENIGEPLL 327
>gi|358382417|gb|EHK20089.1| hypothetical protein TRIVIDRAFT_138117, partial [Trichoderma virens
Gv29-8]
Length = 229
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 140/224 (62%), Gaps = 10/224 (4%)
Query: 43 PRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEK 102
P S +++P+P P RPS S + + V +K+ ++GD IGKTS + K
Sbjct: 12 PASGLSNPAPP-------PYNDYRPS---SGDQSNGRSHVVIKVGMVGDAQIGKTSLMVK 61
Query: 103 YVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFM 162
YV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D++AILFM
Sbjct: 62 YVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFM 121
Query: 163 FDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKAL 222
FDLT + TL S+ WY+Q R N+TAIP+++GTK+D F+ PI Q I++QAR +AKA+
Sbjct: 122 FDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFVNFPIQDQEEISNQARRFAKAM 181
Query: 223 NATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
A+L FSS +++INV KI K + +K FD+ T+ +GEP++
Sbjct: 182 RASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 225
>gi|302773247|ref|XP_002970041.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300162552|gb|EFJ29165.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 265
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 130/200 (65%), Gaps = 6/200 (3%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFL-EKYVGDEKEQGGSPGEGLNMMDKTLL 126
SL + R DA V LK++ +GDC GKTSFL K EK+ + G L +K L
Sbjct: 69 SLSKADRSEDA---VVLKVATVGDCESGKTSFLVSKSELSEKDYAQTLGVALR--EKCLR 123
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ 186
++ A+I +SIWE+ GD +D LP C+ + A++FMFDLT R TLKSV W+ ++RK N
Sbjct: 124 IKNAKIVFSIWELGGDRLFEDLLPSVCEGAAAVIFMFDLTKRSTLKSVKEWFIKSRKINN 183
Query: 187 TAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
AIPI++G+K+D FI P D+Q I QA YA+ + A+LFFSS T+NIN++KI K I A
Sbjct: 184 CAIPILVGSKYDQFIYFPQDIQVAITKQAMFYAETMGASLFFSSTTHNINIHKIFKIIVA 243
Query: 247 KLFDIPWTLERNLTIGEPII 266
K+FD+ + RN +GEP++
Sbjct: 244 KVFDLRCNISRNYNLGEPVV 263
>gi|358392743|gb|EHK42147.1| hypothetical protein TRIATDRAFT_29072 [Trichoderma atroviride IMI
206040]
Length = 272
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 131/201 (65%), Gaps = 3/201 (1%)
Query: 66 RPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL 125
RPS S + N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+
Sbjct: 70 RPS---SGDQSNGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTI 126
Query: 126 LVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN 185
+R I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N
Sbjct: 127 SIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFN 186
Query: 186 QTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+TAIP+++GTK+D F+ PI Q I++QAR +AKA+ A+L FSS +++INV KI K +
Sbjct: 187 KTAIPVLVGTKYDHFVNFPIQDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVL 246
Query: 246 AKLFDIPWTLERNLTIGEPII 266
+K FD+ T+ +GEP++
Sbjct: 247 SKAFDLKCTIPEIENVGEPLL 267
>gi|19114197|ref|NP_593285.1| GTPase Spg1 [Schizosaccharomyces pombe 972h-]
gi|21542235|sp|P87027.1|SPG1_SCHPO RecName: Full=Septum-promoting GTP-binding protein 1; AltName:
Full=GTPase spg1; AltName: Full=Sid3 protein
gi|1935000|emb|CAA72985.1| GTPase [Schizosaccharomyces pombe]
gi|9408178|emb|CAB99273.1| GTPase Spg1 [Schizosaccharomyces pombe]
Length = 198
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 127/189 (67%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + YV ++ + G+N M+KT+ +R I++SIW++
Sbjct: 7 NNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDL 66
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TA+PI+IGTK+D
Sbjct: 67 GGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDH 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I QAR YAKA+ A+L F S +++INV KI K + AK+FD+ T+
Sbjct: 127 FMTFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEIK 186
Query: 260 TIGEPIIDF 268
+G+PI+++
Sbjct: 187 NVGDPILEY 195
>gi|346318179|gb|EGX87783.1| protein TEM1 [Cordyceps militaris CM01]
Length = 443
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 126/190 (66%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SI
Sbjct: 249 NGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSI 308
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK
Sbjct: 309 WDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTK 368
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D F+ PI Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+ T+
Sbjct: 369 YDHFVNFPIQDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIP 428
Query: 257 RNLTIGEPII 266
+GEP++
Sbjct: 429 EIENVGEPLL 438
>gi|400599410|gb|EJP67107.1| septum initiation protein sid3 [Beauveria bassiana ARSEF 2860]
Length = 317
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 125/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 126 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 185
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 186 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 245
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ PI Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+ T+
Sbjct: 246 FVNFPIQDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 305
Query: 260 TIGEPII 266
+GEP++
Sbjct: 306 NVGEPLL 312
>gi|2408103|emb|CAA04846.1| sid3 [Schizosaccharomyces pombe]
Length = 199
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 127/190 (66%), Gaps = 1/190 (0%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYV-GDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
N V +K+ ++GD IGKTS + YV G E+ G+N M+KT+ +R I++SIW+
Sbjct: 7 NNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLVGVNFMEKTISIRNTEITFSIWD 66
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
+ G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TA+PI+IGTK+D
Sbjct: 67 LGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 126
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
F+ P + Q I QAR YAKA+ A+L F S +++INV KI K + AK+FD+ T+
Sbjct: 127 HFMTFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEI 186
Query: 259 LTIGEPIIDF 268
+G+PI+++
Sbjct: 187 KNVGDPILEY 196
>gi|242761774|ref|XP_002340246.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
gi|242761779|ref|XP_002340247.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
gi|218723442|gb|EED22859.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
gi|218723443|gb|EED22860.1| GTP binding protein (SPG1), putative [Talaromyces stipitatus ATCC
10500]
Length = 336
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 1/231 (0%)
Query: 37 IRYRMLPRSTVTSPSPSVLESGLVPG-TTVRPSLCHSHRHLDADNLVALKISLLGDCHIG 95
+ ++ +P+ + + P + G G +P + N V +K+ ++GD IG
Sbjct: 101 MSHQQIPQQSASRPGSGLSSGGERYGYPNSQPEQNQKQVAQPSRNSVVIKVGMVGDAQIG 160
Query: 96 KTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKD 155
KTS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D
Sbjct: 161 KTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCND 220
Query: 156 SIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQA 215
++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D F+ P + Q I+ QA
Sbjct: 221 AVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFVNFPREDQEEISLQA 280
Query: 216 RAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ YAKA+ A+L FSS +++INV KI K + +K FD+ T+ IGEP++
Sbjct: 281 KRYAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENIGEPLL 331
>gi|119471324|ref|XP_001258159.1| GTP binding protein (SPG1), putative [Neosartorya fischeri NRRL
181]
gi|119406311|gb|EAW16262.1| GTP binding protein (SPG1), putative [Neosartorya fischeri NRRL
181]
Length = 319
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 136/224 (60%), Gaps = 7/224 (3%)
Query: 50 PSPSVLESGLVPGTTVRPSLCHSHRHLD-------ADNLVALKISLLGDCHIGKTSFLEK 102
PS S SGL G R + + + + N V +K+ ++GD IGKTS + K
Sbjct: 91 PSSSRPGSGLSSGPEQRQGISQTSQDVSQKQPSQPTKNSVVIKVGMVGDAQIGKTSLMVK 150
Query: 103 YVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFM 162
YV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D++AILFM
Sbjct: 151 YVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFM 210
Query: 163 FDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKAL 222
FDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+ P + Q I+ QA+ +AKA+
Sbjct: 211 FDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVNFPREDQEEISIQAKRFAKAM 270
Query: 223 NATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
A+L FSS +++INV KI K + AK FD+ T+ IGEP++
Sbjct: 271 KASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENIGEPLL 314
>gi|238490670|ref|XP_002376572.1| GTP binding protein (SPG1), putative [Aspergillus flavus NRRL3357]
gi|317145506|ref|XP_001820848.2| GTP-binding protein (SPG1) [Aspergillus oryzae RIB40]
gi|220696985|gb|EED53326.1| GTP binding protein (SPG1), putative [Aspergillus flavus NRRL3357]
gi|391865592|gb|EIT74871.1| Ras GTPase [Aspergillus oryzae 3.042]
Length = 305
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 139/234 (59%), Gaps = 15/234 (6%)
Query: 48 TSPSPSVLESGLVP-------GTTVRPSLCHSHRHL--------DADNLVALKISLLGDC 92
T PSPS L +P G + P + + + + N V +K+ ++GD
Sbjct: 67 TRPSPSPLTQTQIPSLSRPSSGLSSAPGISQTSQDVSQKQPSQQQTKNSVVIKVGMVGDA 126
Query: 93 HIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVA 152
IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP+
Sbjct: 127 QIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLV 186
Query: 153 CKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIA 212
C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+ P + Q I+
Sbjct: 187 CNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVNFPREDQEEIS 246
Query: 213 SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+ +GEP++
Sbjct: 247 VQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENVGEPLL 300
>gi|302807002|ref|XP_002985232.1| SPG1, ras family GTPase [Selaginella moellendorffii]
gi|300147060|gb|EFJ13726.1| SPG1, ras family GTPase [Selaginella moellendorffii]
Length = 265
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 130/200 (65%), Gaps = 6/200 (3%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFL-EKYVGDEKEQGGSPGEGLNMMDKTLL 126
SL + R DA V LK++ +GDC GKTSFL K EK+ + G L +K L
Sbjct: 69 SLRKADRSEDA---VVLKVATVGDCESGKTSFLVSKSELSEKDYVQTLGVALR--EKCLR 123
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ 186
++ A+I +SIWE+ GD +D LP C+ + A++FMFDLT R TLKSV W+ ++RK N
Sbjct: 124 IKNAKIVFSIWELGGDRLFEDLLPSVCEGAAAVIFMFDLTKRSTLKSVKEWFIKSRKINN 183
Query: 187 TAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
AIP+++G+K+D FI P D+Q I QA YA+ + A+LFFSS T+NIN++KI K I A
Sbjct: 184 CAIPVLVGSKYDQFIYFPQDIQVAITKQAMFYAETMGASLFFSSTTHNINIHKIFKIIVA 243
Query: 247 KLFDIPWTLERNLTIGEPII 266
K+FD+ + RN +GEP++
Sbjct: 244 KVFDLRCNISRNYNLGEPVV 263
>gi|389629378|ref|XP_003712342.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae 70-15]
gi|351644674|gb|EHA52535.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae 70-15]
gi|440465432|gb|ELQ34752.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae Y34]
gi|440481521|gb|ELQ62100.1| septum-promoting GTP-binding protein 1 [Magnaporthe oryzae P131]
Length = 311
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 126/187 (67%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 120 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 179
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 180 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 239
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I++QAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 240 FVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 299
Query: 260 TIGEPII 266
+GEP++
Sbjct: 300 NVGEPLL 306
>gi|330802506|ref|XP_003289257.1| spg1, Ras superfamily GTPase [Dictyostelium purpureum]
gi|325080659|gb|EGC34205.1| spg1, Ras superfamily GTPase [Dictyostelium purpureum]
Length = 203
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 126/189 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +RG I++SIW++
Sbjct: 15 NNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFSIWDL 74
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTKFD
Sbjct: 75 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDV 134
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F PI+ Q I QAR +A A+ + L F S +++INV KI K + +K FD+ T+ + +
Sbjct: 135 FATKPIEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTIPKVV 194
Query: 260 TIGEPIIDF 268
+GEP++++
Sbjct: 195 NVGEPLLEY 203
>gi|296423250|ref|XP_002841168.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637402|emb|CAZ85359.1| unnamed protein product [Tuber melanosporum]
Length = 300
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 126/191 (65%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
L N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++S
Sbjct: 105 LGKRNSVVIKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFS 164
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGT 195
IW++ G + + LP+ C D++AILFMFDLT + TL S+ WY+QAR N+TAIP ++GT
Sbjct: 165 IWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGT 224
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K+D F+ P + Q I+ QAR +A+A+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 225 KYDHFVNFPREDQEEISKQARKFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTI 284
Query: 256 ERNLTIGEPII 266
+GEP++
Sbjct: 285 PEIEHVGEPLL 295
>gi|213407448|ref|XP_002174495.1| GTPase Spg1 [Schizosaccharomyces japonicus yFS275]
gi|212002542|gb|EEB08202.1| GTPase Spg1 [Schizosaccharomyces japonicus yFS275]
Length = 198
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 126/189 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 7 NSVTIKLGMVGDSSIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 66
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TA+PI+IGTK+D
Sbjct: 67 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDY 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ L + Q I QAR YAK + A+L F S +++INV KI K + AK+FD+ T+
Sbjct: 127 FVGLSREDQEEITKQARRYAKVMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEIT 186
Query: 260 TIGEPIIDF 268
+GEPI+++
Sbjct: 187 AVGEPILEY 195
>gi|340959762|gb|EGS20943.1| putative GTP binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 310
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 127/189 (67%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 117 ARNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 176
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+
Sbjct: 177 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKY 236
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ L + Q I++QAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 237 DHFVNLSREEQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPE 296
Query: 258 NLTIGEPII 266
+GEP++
Sbjct: 297 ITNVGEPLL 305
>gi|66802470|ref|XP_635107.1| small GTPase [Dictyostelium discoideum AX4]
gi|60463433|gb|EAL61618.1| small GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 126/189 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +RG I++SIW++
Sbjct: 15 NNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFSIWDL 74
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTKFD
Sbjct: 75 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDV 134
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F PI+ Q I QAR +A A+ + L F S +++INV KI K + +K FD+ T+ + +
Sbjct: 135 FATKPIEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTIPKVV 194
Query: 260 TIGEPIIDF 268
+GEP++++
Sbjct: 195 GVGEPLLEY 203
>gi|385302986|gb|EIF47089.1| gtp binding protein [Dekkera bruxellensis AWRI1499]
Length = 235
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 138/223 (61%), Gaps = 5/223 (2%)
Query: 44 RSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKY 103
R+T T P +G T V +S H + N V LK+ L+GD +GKTS + KY
Sbjct: 13 RATSTGPX----RTGSRTSTRVAEGXSNSSHHSEK-NTVTLKVGLVGDAQVGKTSLMVKY 67
Query: 104 VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMF 163
V + ++ + G+N M++T+ +R I++SIW++ G+A+ + LP+ D++A+LFMF
Sbjct: 68 VENCFDEIYTQTLGVNFMERTIRIRNTEITFSIWDLGGEAEFTNMLPLVASDAVAVLFMF 127
Query: 164 DLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALN 223
DL+ + TL SV WY+QAR N+TAIP ++GTK+D F+ LP + Q I QA+ YA+A+N
Sbjct: 128 DLSRKITLXSVKDWYRQARGFNRTAIPFLVGTKYDLFVDLPDEQQEEITRQAKKYARAMN 187
Query: 224 ATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
A L F+S +IN+ KI K + +K FD+ + + GEPI+
Sbjct: 188 APLIFTSTCASINIQKIFKIVISKTFDLRLKIPEIVNTGEPIL 230
>gi|380477690|emb|CCF44012.1| hypothetical protein CH063_03212 [Colletotrichum higginsianum]
Length = 302
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 125/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 111 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 170
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 171 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 230
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+ T+
Sbjct: 231 FVNFPREDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 290
Query: 260 TIGEPII 266
+GEP++
Sbjct: 291 NVGEPLL 297
>gi|358367457|dbj|GAA84076.1| GTP binding protein [Aspergillus kawachii IFO 4308]
Length = 311
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 125/189 (66%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 118 AKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 177
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+
Sbjct: 178 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKY 237
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 238 DHFVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPE 297
Query: 258 NLTIGEPII 266
+GEP++
Sbjct: 298 IENVGEPLL 306
>gi|310794332|gb|EFQ29793.1| hypothetical protein GLRG_04937 [Glomerella graminicola M1.001]
Length = 302
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 125/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 111 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 170
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 171 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 230
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+ T+
Sbjct: 231 FVNFPREDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 290
Query: 260 TIGEPII 266
+GEP++
Sbjct: 291 NVGEPLL 297
>gi|408393465|gb|EKJ72729.1| hypothetical protein FPSE_07129 [Fusarium pseudograminearum CS3096]
Length = 292
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 101 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 160
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 161 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 220
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+ T+
Sbjct: 221 FVNFPPQDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 280
Query: 260 TIGEPII 266
+GEP++
Sbjct: 281 NVGEPLL 287
>gi|449545643|gb|EMD36614.1| septum-promoting GTP-binding protein 1 [Ceriporiopsis subvermispora
B]
Length = 226
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 127/201 (63%), Gaps = 4/201 (1%)
Query: 66 RPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL 125
RPSL + + N V +K+ +LGD IGKTS + KYV ++ G+N M+KT+
Sbjct: 25 RPSLENGNEQ----NSVVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTI 80
Query: 126 LVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN 185
VR I++S+W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N
Sbjct: 81 TVRRTSITFSLWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFN 140
Query: 186 QTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+TAIP +IGTKFD F P D Q I QA+ +AKA++A+L F S + +INV KI K +
Sbjct: 141 KTAIPFLIGTKFDTFATFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVL 200
Query: 246 AKLFDIPWTLERNLTIGEPII 266
AK FD+ + +GEPI+
Sbjct: 201 AKAFDLKCVIPEIDGVGEPIL 221
>gi|440639791|gb|ELR09710.1| hypothetical protein GMDG_04196 [Geomyces destructans 20631-21]
Length = 332
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 125/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 140 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 199
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 200 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 259
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I++QAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 260 FVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 319
Query: 260 TIGEPII 266
IGEP++
Sbjct: 320 NIGEPLL 326
>gi|328877042|gb|EGG25405.1| small GTPase [Dictyostelium fasciculatum]
Length = 204
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 126/189 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +RG I++SIW++
Sbjct: 16 NNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFSIWDL 75
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK+D
Sbjct: 76 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKYDV 135
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F LP + Q I QAR +A A+ + L F S +++INV KI K + +K FD+ T+ + +
Sbjct: 136 FATLPAEDQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTIPKII 195
Query: 260 TIGEPIIDF 268
IGEP++++
Sbjct: 196 NIGEPLLEY 204
>gi|164423258|ref|XP_960671.2| protein TEM1 [Neurospora crassa OR74A]
gi|157070013|gb|EAA31435.2| protein TEM1 [Neurospora crassa OR74A]
Length = 282
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 127/195 (65%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S + N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R
Sbjct: 83 SSEQANGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTE 142
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+
Sbjct: 143 ITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPV 202
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++GTK+D F+ L + Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+
Sbjct: 203 LVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDL 262
Query: 252 PWTLERNLTIGEPII 266
T+ +GEP++
Sbjct: 263 KCTIPEISNVGEPLL 277
>gi|154298912|ref|XP_001549877.1| septum-promoting GTP-binding protein 1 [Botryotinia fuckeliana
B05.10]
gi|347836713|emb|CCD51285.1| similar to septum-promoting GTP-binding protein [Botryotinia
fuckeliana]
Length = 312
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 126/189 (66%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 118 SKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 177
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+
Sbjct: 178 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKY 237
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ P + Q I++QAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 238 DHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPE 297
Query: 258 NLTIGEPII 266
+GEP++
Sbjct: 298 IENVGEPLL 306
>gi|449302381|gb|EMC98390.1| hypothetical protein BAUCODRAFT_121261 [Baudoinia compniacensis
UAMH 10762]
Length = 272
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 82 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 141
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 142 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 201
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QAR +AKA+ A+L FSS +++INV KI K + AK FD+ T+ +
Sbjct: 202 NFPREEQEEISTQARRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLRCTIPEIEHV 261
Query: 262 GEPII 266
GEP++
Sbjct: 262 GEPLL 266
>gi|406866836|gb|EKD19875.1| septum-promoting GTP-binding protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 324
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 125/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 133 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 192
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 193 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 252
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I++QAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 253 FVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 312
Query: 260 TIGEPII 266
+GEP++
Sbjct: 313 NVGEPLL 319
>gi|367037751|ref|XP_003649256.1| hypothetical protein THITE_2107730 [Thielavia terrestris NRRL 8126]
gi|346996517|gb|AEO62920.1| hypothetical protein THITE_2107730 [Thielavia terrestris NRRL 8126]
Length = 340
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 125/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 149 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 208
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+D
Sbjct: 209 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDH 268
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ L + Q I++QAR +AKA+ A L FSS +++INV KI K + AK FD+ T+
Sbjct: 269 FVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIT 328
Query: 260 TIGEPII 266
+GEP++
Sbjct: 329 NVGEPLL 335
>gi|134078809|emb|CAK45868.1| unnamed protein product [Aspergillus niger]
Length = 214
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 23 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 82
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D
Sbjct: 83 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDH 142
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 143 FVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIE 202
Query: 260 TIGEPII 266
+GEP++
Sbjct: 203 NVGEPLL 209
>gi|403419848|emb|CCM06548.1| predicted protein [Fibroporia radiculosa]
Length = 220
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 127/201 (63%), Gaps = 4/201 (1%)
Query: 66 RPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL 125
RPSL + + N V +K+ +LGD IGKTS + KYV ++ G+N M+KT+
Sbjct: 19 RPSLENGNEQ----NSVVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTI 74
Query: 126 LVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN 185
VR I++S+W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N
Sbjct: 75 TVRRTSITFSLWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFN 134
Query: 186 QTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+TAIP +IGTKFD F P D Q I QA+ +AKA++A+L F S + +INV KI K +
Sbjct: 135 KTAIPFLIGTKFDTFSTFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVL 194
Query: 246 AKLFDIPWTLERNLTIGEPII 266
AK FD+ + +GEP++
Sbjct: 195 AKAFDLKCVIPEIDGVGEPVL 215
>gi|83768709|dbj|BAE58846.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 200
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 9 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 68
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 69 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 128
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 129 FVNFPREDQEEISVQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIE 188
Query: 260 TIGEPII 266
+GEP++
Sbjct: 189 NVGEPLL 195
>gi|336263093|ref|XP_003346328.1| hypothetical protein SMAC_07977 [Sordaria macrospora k-hell]
gi|380088074|emb|CCC13907.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 127/195 (65%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S + N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R
Sbjct: 116 SSEQANGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTE 175
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+
Sbjct: 176 ITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPV 235
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++GTK+D F+ L + Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+
Sbjct: 236 LVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDL 295
Query: 252 PWTLERNLTIGEPII 266
T+ +GEP++
Sbjct: 296 KCTIPEISNVGEPLL 310
>gi|259483460|tpe|CBF78868.1| TPA: GTP binding protein (SPG1), putative (AFU_orthologue;
AFUA_6G10330) [Aspergillus nidulans FGSC A4]
Length = 314
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 123 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 182
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 183 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 242
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 243 FVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIE 302
Query: 260 TIGEPII 266
IGEP++
Sbjct: 303 NIGEPLL 309
>gi|121699736|ref|XP_001268133.1| GTP binding protein (SPG1), putative [Aspergillus clavatus NRRL 1]
gi|119396275|gb|EAW06707.1| GTP binding protein (SPG1), putative [Aspergillus clavatus NRRL 1]
Length = 319
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 140/237 (59%), Gaps = 18/237 (7%)
Query: 48 TSPSPSVLE-----------SGLVPGTTVRPSLCHSHRHLD-------ADNLVALKISLL 89
++PSPS+ + SGL G R + + + N V +K+ ++
Sbjct: 78 SNPSPSLAQQPHLPSVPRPDSGLSSGPEQRHGISQVSQEVGQKQPSQPTKNSVVIKVGMV 137
Query: 90 GDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHL 149
GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G + + L
Sbjct: 138 GDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNML 197
Query: 150 PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQW 209
P+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+ P + Q
Sbjct: 198 PLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVNFPREDQE 257
Query: 210 TIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+ +GEP++
Sbjct: 258 EISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENVGEPLL 314
>gi|317032148|ref|XP_001394138.2| GTP-binding protein (SPG1) [Aspergillus niger CBS 513.88]
Length = 311
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 120 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 179
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D
Sbjct: 180 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDH 239
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 240 FVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIE 299
Query: 260 TIGEPII 266
+GEP++
Sbjct: 300 NVGEPLL 306
>gi|336473535|gb|EGO61695.1| hypothetical protein NEUTE1DRAFT_120574 [Neurospora tetrasperma
FGSC 2508]
gi|350293164|gb|EGZ74249.1| small GTPase [Neurospora tetrasperma FGSC 2509]
Length = 314
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 127/195 (65%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S + N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R
Sbjct: 115 SSEQANGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTE 174
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+
Sbjct: 175 ITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPV 234
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++GTK+D F+ L + Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+
Sbjct: 235 LVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDL 294
Query: 252 PWTLERNLTIGEPII 266
T+ +GEP++
Sbjct: 295 KCTIPEISNVGEPLL 309
>gi|225684530|gb|EEH22814.1| septum-promoting GTP-binding protein [Paracoccidioides brasiliensis
Pb03]
Length = 244
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 141/236 (59%), Gaps = 18/236 (7%)
Query: 43 PRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDAD------------NLVALKISLLG 90
P T++ PS SGL G+ R S++ + D N V +K+ ++G
Sbjct: 9 PVQTISRPS-----SGLSGGSD-RYGYPQSYQDPNRDQRQQQQQSAPSKNSVVIKVGMVG 62
Query: 91 DCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLP 150
D IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP
Sbjct: 63 DAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLP 122
Query: 151 VACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWT 210
+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D F+ P + Q
Sbjct: 123 LVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFVNFPREDQEE 182
Query: 211 IASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+ IGEP++
Sbjct: 183 ISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENIGEPLL 238
>gi|402081349|gb|EJT76494.1| septum-promoting GTP-binding protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 332
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 143 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 202
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D F+
Sbjct: 203 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFV 262
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+ T+ +
Sbjct: 263 NFPREDQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 322
Query: 262 GEPII 266
GEP++
Sbjct: 323 GEPLL 327
>gi|38566780|emb|CAE76091.1| related to septum initiation protein sid3 [Neurospora crassa]
Length = 314
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 127/195 (65%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S + N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R
Sbjct: 115 SSEQANGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTE 174
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+
Sbjct: 175 ITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPV 234
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++GTK+D F+ L + Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+
Sbjct: 235 LVGTKYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDL 294
Query: 252 PWTLERNLTIGEPII 266
T+ +GEP++
Sbjct: 295 KCTIPEISNVGEPLL 309
>gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS]
Length = 239
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 140/236 (59%), Gaps = 12/236 (5%)
Query: 39 YRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDA--------DNLVALKISLLG 90
Y+ L + +S P SGL G R SH + N V +K+ ++G
Sbjct: 3 YQQLQQVPQSSSRPG---SGLSSGGD-RYGYSQSHSEQTSRPQSGPPSKNSVVIKVGMVG 58
Query: 91 DCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLP 150
D IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP
Sbjct: 59 DAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLP 118
Query: 151 VACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWT 210
+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+D F+ P + Q
Sbjct: 119 LVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPLLVGTKYDHFVNFPREDQEE 178
Query: 211 IASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+ IGEP++
Sbjct: 179 ISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENIGEPLL 234
>gi|255956441|ref|XP_002568973.1| Pc21g19820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590684|emb|CAP96879.1| Pc21g19820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 370
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 179 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 238
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 239 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 298
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 299 FVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIE 358
Query: 260 TIGEPII 266
IGEP++
Sbjct: 359 NIGEPLL 365
>gi|367024885|ref|XP_003661727.1| hypothetical protein MYCTH_2077959 [Myceliophthora thermophila ATCC
42464]
gi|347008995|gb|AEO56482.1| hypothetical protein MYCTH_2077959 [Myceliophthora thermophila ATCC
42464]
Length = 335
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 126/187 (67%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 144 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 203
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+D
Sbjct: 204 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDH 263
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ L + Q I++QAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 264 FVNLSREEQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIT 323
Query: 260 TIGEPII 266
+GEP++
Sbjct: 324 NVGEPLL 330
>gi|425780032|gb|EKV18055.1| GTP binding protein (SPG1), putative [Penicillium digitatum PHI26]
Length = 362
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 171 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 230
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 231 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 290
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 291 FVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIE 350
Query: 260 TIGEPII 266
+GEP++
Sbjct: 351 NVGEPLL 357
>gi|425777708|gb|EKV15865.1| GTP binding protein (SPG1), putative [Penicillium digitatum Pd1]
Length = 362
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 171 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 230
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 231 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 290
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+
Sbjct: 291 FVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIE 350
Query: 260 TIGEPII 266
+GEP++
Sbjct: 351 NVGEPLL 357
>gi|281202275|gb|EFA76480.1| small GTPase [Polysphondylium pallidum PN500]
Length = 204
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 125/189 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +RG I++SIW++
Sbjct: 16 NNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTISIRGTEITFSIWDL 75
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK+D
Sbjct: 76 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKYDV 135
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F LP + Q I QAR +A A+ + L F S +++INV KI K + +K FD+ T+ +
Sbjct: 136 FATLPAEDQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTIPKIT 195
Query: 260 TIGEPIIDF 268
+GEP++++
Sbjct: 196 NVGEPLLEY 204
>gi|378726709|gb|EHY53168.1| rab family, other [Exophiala dermatitidis NIH/UT8656]
Length = 297
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 108 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 167
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D F+
Sbjct: 168 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDHFV 227
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+ +
Sbjct: 228 NFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENV 287
Query: 262 GEPII 266
GEP++
Sbjct: 288 GEPLL 292
>gi|398407789|ref|XP_003855360.1| hypothetical protein MYCGRDRAFT_55813, partial [Zymoseptoria
tritici IPO323]
gi|339475244|gb|EGP90336.1| hypothetical protein MYCGRDRAFT_55813 [Zymoseptoria tritici IPO323]
Length = 287
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 137/233 (58%), Gaps = 12/233 (5%)
Query: 43 PRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNL---------VALKISLLGDCH 93
P S S +P ++SG RP S D + V +K+ ++GD
Sbjct: 55 PFSESQSGTPDNVQSG---NGISRPPSTQSQGQFDQNGQRQQAQKNASVVIKVGMVGDAQ 111
Query: 94 IGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVAC 153
IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C
Sbjct: 112 IGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVC 171
Query: 154 KDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIAS 213
D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+ P + Q I+
Sbjct: 172 NDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVNFPREEQEEISM 231
Query: 214 QARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+ +GEP++
Sbjct: 232 QAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIEHVGEPLL 284
>gi|389742746|gb|EIM83932.1| small GTPase [Stereum hirsutum FP-91666 SS1]
Length = 229
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 62 GTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMM 121
G P L ++ D N V +K+ ++GD IGKTS + KYV ++ G+N M
Sbjct: 24 GQNAHPLLANN----DEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFM 79
Query: 122 DKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA 181
+KT+ VR I++SIW++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QA
Sbjct: 80 EKTISVRRTTITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQA 139
Query: 182 RKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
R N+TAIP +IGTKFD F P D Q I QA+ +AKA++A+L F S + +INV KI
Sbjct: 140 RGFNKTAIPFLIGTKFDTFATFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIF 199
Query: 242 KFITAKLFDIPWTLERNLTIGEPII 266
K + AK FD+ + +GEP++
Sbjct: 200 KIVLAKAFDLKCVIPEIEGVGEPVL 224
>gi|303314601|ref|XP_003067309.1| septum-promoting GTP-binding protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240106977|gb|EER25164.1| septum-promoting GTP-binding protein, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320037626|gb|EFW19563.1| septum-promoting GTP-binding protein 1 [Coccidioides posadasii str.
Silveira]
gi|392869964|gb|EAS28508.2| septum-promoting GTP-binding protein 1 [Coccidioides immitis RS]
Length = 334
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 126/189 (66%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 141 SKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 200
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+
Sbjct: 201 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPLLVGTKY 260
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 261 DHFVNFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPE 320
Query: 258 NLTIGEPII 266
IGEP++
Sbjct: 321 IENIGEPLL 329
>gi|50420681|ref|XP_458877.1| DEHA2D09482p [Debaryomyces hansenii CBS767]
gi|49654544|emb|CAG87029.1| DEHA2D09482p [Debaryomyces hansenii CBS767]
Length = 199
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 122/195 (62%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
+ D +N VALKI L+GD IGKTS + KYV ++ G+N MDK + +R
Sbjct: 2 EEQQEDHNNQVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTV 61
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
I++SIW++ G + + LP+ D++AILFMFDLT + TL S+ WY+Q R N+TAIP
Sbjct: 62 ITFSIWDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPF 121
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++GTK+D FI LP Q I QA+ + A+ A + F S +++INV KI K I +K FD+
Sbjct: 122 LVGTKYDQFIDLPYQDQMEITQQAKKFGHAMKAPVIFCSTSHSINVQKIFKIILSKAFDL 181
Query: 252 PWTLERNLTIGEPII 266
L+ + +GEPI+
Sbjct: 182 RLNLDEIVNVGEPIL 196
>gi|340519186|gb|EGR49425.1| ras small GTPase [Trichoderma reesei QM6a]
Length = 184
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 121/179 (67%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G + +
Sbjct: 1 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 60
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+D F+ PI
Sbjct: 61 MLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDHFVNFPIQD 120
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
Q I+SQAR +AKA+ A+L FSS +++INV KI K + +K FD+ T+ +GEP++
Sbjct: 121 QEEISSQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 179
>gi|240274719|gb|EER38235.1| septum-promoting GTP-binding protein [Ajellomyces capsulatus H143]
gi|325091055|gb|EGC44365.1| septum-promoting GTP-binding protein [Ajellomyces capsulatus H88]
Length = 373
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 181 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 240
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D
Sbjct: 241 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDH 300
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 301 FVNFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 360
Query: 260 TIGEPII 266
IGEP++
Sbjct: 361 NIGEPLL 367
>gi|409077313|gb|EKM77679.1| hypothetical protein AGABI1DRAFT_114980 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426193199|gb|EKV43133.1| septum-promoting GTP-binding protein 1 [Agaricus bisporus var.
bisporus H97]
Length = 219
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/196 (43%), Positives = 124/196 (63%)
Query: 71 HSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGA 130
+ + D N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR
Sbjct: 19 QNAENGDERNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRT 78
Query: 131 RISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP 190
I++SIW++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP
Sbjct: 79 TITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIP 138
Query: 191 IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+IGTKFD F P D Q I QA+ +AKA++A+L F S + +INV KI K + AK FD
Sbjct: 139 FLIGTKFDQFATFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFD 198
Query: 251 IPWTLERNLTIGEPII 266
+ + +GEPI+
Sbjct: 199 LKCVIPEIEGVGEPIL 214
>gi|320165284|gb|EFW42183.1| sid3 [Capsaspora owczarzaki ATCC 30864]
Length = 218
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 122/189 (64%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 30 NSVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVNFMEKTICIRNTEITFSIWDL 89
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+ AI +IGTKFD
Sbjct: 90 GGQREFINMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKNAISFLIGTKFDI 149
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F Q PI+ Q + QAR YAKA+ A L F S ++ INV KI K + +K FD+ T+
Sbjct: 150 FAQSPIEEQEEVTRQARKYAKAMKAPLIFCSTSHAINVQKIFKIVLSKAFDLKCTIPLIE 209
Query: 260 TIGEPIIDF 268
+GEPII++
Sbjct: 210 NVGEPIIEY 218
>gi|393222433|gb|EJD07917.1| small GTPase [Fomitiporia mediterranea MF3/22]
Length = 233
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SI
Sbjct: 39 DEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSI 98
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK
Sbjct: 99 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTK 158
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D F P D Q I QA+ +AKA++A+L F S + +INV KI K + AK FD+ +
Sbjct: 159 YDTFATFPRDEQEEITKQAKKFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIP 218
Query: 257 RNLTIGEPII 266
+GEPI+
Sbjct: 219 EIEGVGEPIL 228
>gi|315042179|ref|XP_003170466.1| septum-promoting GTP-binding protein 1 [Arthroderma gypseum CBS
118893]
gi|311345500|gb|EFR04703.1| septum-promoting GTP-binding protein 1 [Arthroderma gypseum CBS
118893]
Length = 383
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 125/189 (66%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 190 SKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 249
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+
Sbjct: 250 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKY 309
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 310 DHFVNFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPE 369
Query: 258 NLTIGEPII 266
IGEP++
Sbjct: 370 IENIGEPLL 378
>gi|451851765|gb|EMD65063.1| hypothetical protein COCSADRAFT_116415 [Cochliobolus sativus
ND90Pr]
Length = 368
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 179 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 238
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 239 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 298
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QA+ +A+A+ A+L FSS +++INV KI K + +K FD+ T+ I
Sbjct: 299 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 358
Query: 262 GEPII 266
GEP++
Sbjct: 359 GEPLL 363
>gi|254573698|ref|XP_002493958.1| GTP-binding protein of the ras superfamily involved in termination
of M-phase [Komagataella pastoris GS115]
gi|238033757|emb|CAY71779.1| GTP-binding protein of the ras superfamily involved in termination
of M-phase [Komagataella pastoris GS115]
Length = 219
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 133/201 (66%), Gaps = 3/201 (1%)
Query: 66 RPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL 125
+ ++ HS R N VA+KI L+GD IGKTS + KYV ++ + G N M++ +
Sbjct: 17 QQNVPHSQRET---NSVAVKIGLIGDAQIGKTSLMVKYVEGCYDENYTQTLGANFMERII 73
Query: 126 LVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN 185
+R +I+ SIW++ G+ + + LP+ D++ I+FMFDLT + TL S+ WY+QAR N
Sbjct: 74 NIRNTQITLSIWDLGGEKEFINMLPLVTTDAVVIIFMFDLTRKSTLNSIKEWYRQARGFN 133
Query: 186 QTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+TAIP ++GTK+D FI LP + Q I +QA+ YA+A++A+L FSS +++IN+ K+ K I
Sbjct: 134 KTAIPFLVGTKYDLFIDLPDEDQIEITNQAKKYARAMSASLIFSSTSHSINIQKLFKVIL 193
Query: 246 AKLFDIPWTLERNLTIGEPII 266
+K+FDI T+ + GEP++
Sbjct: 194 SKVFDIKATIPEIVNTGEPLL 214
>gi|344304528|gb|EGW34760.1| hypothetical protein SPAPADRAFT_145190 [Spathaspora passalidarum
NRRL Y-27907]
Length = 202
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 121/192 (63%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D +N VALKI L+GD IGKTS + KYV ++ G+N MDK + +R I++SI
Sbjct: 10 DQNNQVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSI 69
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ D++AILFMFDLT + TL S+ WY+QAR N+TAIP ++GTK
Sbjct: 70 WDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTK 129
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D FI L Q I QA+ + A+ A + F S +++INV KI K I +K FD+ L+
Sbjct: 130 YDQFIDLSFQDQLEITQQAKKFGSAMKAPVVFCSTSHSINVQKIFKIILSKAFDLKLNLD 189
Query: 257 RNLTIGEPIIDF 268
+GEPI+ F
Sbjct: 190 EITNVGEPILIF 201
>gi|452845079|gb|EME47012.1| hypothetical protein DOTSEDRAFT_69106 [Dothistroma septosporum
NZE10]
Length = 281
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 92 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 151
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 152 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 211
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+ +
Sbjct: 212 NFPREEQEEISTQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIENV 271
Query: 262 GEPII 266
GEP++
Sbjct: 272 GEPLL 276
>gi|326473461|gb|EGD97470.1| GTP binding protein [Trichophyton tonsurans CBS 112818]
gi|326480315|gb|EGE04325.1| septum-promoting GTP-binding protein 1 [Trichophyton equinum CBS
127.97]
Length = 401
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 210 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 269
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 270 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 329
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 330 FVNFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 389
Query: 260 TIGEPII 266
IGEP++
Sbjct: 390 NIGEPLL 396
>gi|241948475|ref|XP_002416960.1| M-phase controlling GTPase, putative; septum-promoting GTP-binding
protein, putative [Candida dubliniensis CD36]
gi|223640298|emb|CAX44548.1| M-phase controlling GTPase, putative [Candida dubliniensis CD36]
Length = 200
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 120/190 (63%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D +N VALKI L+GD IGKTS + KYV ++ G+N MDK + +R I++SI
Sbjct: 8 DHNNQVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSI 67
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK
Sbjct: 68 WDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTK 127
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D FI L Q I QA+ + A+ A + F S +++INV KI K I +K FD+ LE
Sbjct: 128 YDQFIDLSFQDQIEITQQAKKFGSAMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLE 187
Query: 257 RNLTIGEPII 266
+ +GEPI+
Sbjct: 188 EIVNVGEPIL 197
>gi|451995428|gb|EMD87896.1| hypothetical protein COCHEDRAFT_1182963 [Cochliobolus
heterostrophus C5]
Length = 368
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 179 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 238
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 239 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 298
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QA+ +A+A+ A+L FSS +++INV KI K + +K FD+ T+ I
Sbjct: 299 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 358
Query: 262 GEPII 266
GEP++
Sbjct: 359 GEPLL 363
>gi|327352093|gb|EGE80950.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
ATCC 18188]
Length = 366
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 174 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 233
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D
Sbjct: 234 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDH 293
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +A+A+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 294 FVNFPREDQEEISIQAKRFARAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 353
Query: 260 TIGEPII 266
IGEP++
Sbjct: 354 NIGEPLL 360
>gi|453086825|gb|EMF14866.1| small GTPase [Mycosphaerella populorum SO2202]
Length = 324
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 123/185 (66%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 135 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 194
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 195 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 254
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+ +
Sbjct: 255 NFPREEQEEISQQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIENV 314
Query: 262 GEPII 266
GEP++
Sbjct: 315 GEPLL 319
>gi|392586735|gb|EIW76071.1| small GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 220
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 52 PSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQG 111
P S + G P L + + N V +K+ ++GD IGKTS + KYV ++
Sbjct: 5 PGSSSSAMAGGQNPHPML----ENKEDKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDED 60
Query: 112 GSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTL 171
G+N M+KT+ VR I++SIW++ G + + LP+ C D++AILFMFDL+ + TL
Sbjct: 61 YIQTLGVNFMEKTISVRRTTITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTL 120
Query: 172 KSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSA 231
SV WY+QAR N+TAIP +IGTKFD F P D Q I QA+ +A+A++A+L F S+
Sbjct: 121 NSVKEWYRQARGFNKTAIPFLIGTKFDTFATFPRDEQEEITKQAKRFARAMHASLIFCSS 180
Query: 232 TYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ +INV KI K + AK FD+ + +GEP++
Sbjct: 181 SASINVQKIFKIVLAKAFDLKCVIPEIEGVGEPVL 215
>gi|392562659|gb|EIW55839.1| small monomeric GTPase [Trametes versicolor FP-101664 SS1]
Length = 219
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 2/197 (1%)
Query: 72 SHRHLDAD--NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRG 129
S +LD++ N V +K+ +LGD IGKTS + KYV ++ G+N M+KT+ VR
Sbjct: 18 SRPNLDSNEQNSVVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTITVRR 77
Query: 130 ARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI 189
I++S+W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAI
Sbjct: 78 TSITFSLWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAI 137
Query: 190 PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
P +IGTKFD F P D Q I QA+ +AKA++A+L F S + +INV KI K + AK F
Sbjct: 138 PFLIGTKFDTFSTFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAF 197
Query: 250 DIPWTLERNLTIGEPII 266
D+ + +GEP++
Sbjct: 198 DLKCVIPEIDGVGEPVL 214
>gi|327300210|ref|XP_003234798.1| septum-promoting GTP-binding protein 1 [Trichophyton rubrum CBS
118892]
gi|326463692|gb|EGD89145.1| septum-promoting GTP-binding protein 1 [Trichophyton rubrum CBS
118892]
Length = 405
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 214 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 273
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 274 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 333
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 334 FVNFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 393
Query: 260 TIGEPII 266
IGEP++
Sbjct: 394 NIGEPLL 400
>gi|169856754|ref|XP_001835031.1| small monomeric GTPase [Coprinopsis cinerea okayama7#130]
gi|116503902|gb|EAU86797.1| small monomeric GTPase [Coprinopsis cinerea okayama7#130]
Length = 218
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SI
Sbjct: 24 DERNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSI 83
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK
Sbjct: 84 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTK 143
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
FD F P D Q I QA+ +A+A++A+L F S + +INV KI K + AK FD+ +
Sbjct: 144 FDQFATFPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIP 203
Query: 257 RNLTIGEPII 266
+GEPI+
Sbjct: 204 EIEGVGEPIL 213
>gi|189199684|ref|XP_001936179.1| septum-promoting GTP-binding protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983278|gb|EDU48766.1| septum-promoting GTP-binding protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 357
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 168 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 227
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 228 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 287
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QA+ +A+A+ A+L FSS +++INV KI K + +K FD+ T+ I
Sbjct: 288 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 347
Query: 262 GEPII 266
GEP++
Sbjct: 348 GEPLL 352
>gi|330920338|ref|XP_003298967.1| hypothetical protein PTT_09857 [Pyrenophora teres f. teres 0-1]
gi|311327552|gb|EFQ92935.1| hypothetical protein PTT_09857 [Pyrenophora teres f. teres 0-1]
Length = 357
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 168 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 227
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 228 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 287
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QA+ +A+A+ A+L FSS +++INV KI K + +K FD+ T+ I
Sbjct: 288 NFPREEQEEISNQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENI 347
Query: 262 GEPII 266
GEP++
Sbjct: 348 GEPLL 352
>gi|302687144|ref|XP_003033252.1| hypothetical protein SCHCODRAFT_84960 [Schizophyllum commune H4-8]
gi|300106946|gb|EFI98349.1| hypothetical protein SCHCODRAFT_84960 [Schizophyllum commune H4-8]
Length = 224
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 123/190 (64%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SI
Sbjct: 30 DEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSI 89
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK
Sbjct: 90 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTK 149
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D F LP D Q I QA+ +A+A++A+L F S + +INV KI K + AK FD+ +
Sbjct: 150 YDQFATLPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIP 209
Query: 257 RNLTIGEPII 266
+GEPI+
Sbjct: 210 EIEGVGEPIL 219
>gi|345570601|gb|EGX53422.1| hypothetical protein AOL_s00006g288 [Arthrobotrys oligospora ATCC
24927]
Length = 280
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 124/187 (66%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 84 NSVVIKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 143
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D
Sbjct: 144 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGLNKTAIPFLIGTKYDH 203
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ L + Q I+ QA+ +A+A+ A+L FSS +++INV KI K + +K FD+ T+
Sbjct: 204 FVNLSKEDQEEISKQAKRFARAMKASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIE 263
Query: 260 TIGEPII 266
+G+P++
Sbjct: 264 NVGDPLL 270
>gi|328771379|gb|EGF81419.1| hypothetical protein BATDEDRAFT_87361 [Batrachochytrium
dendrobatidis JAM81]
Length = 226
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 122/189 (64%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 38 NNVVIKVGMMGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTIAIRSTEITFSIWDL 97
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D+IAILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK+D
Sbjct: 98 GGQREFINMLPLVCNDAIAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKYDY 157
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F P + Q I QAR +AKA+ A L F S +++INV KI K + +K FD+ T+ R
Sbjct: 158 FAASPYEEQEEITKQARRFAKAMRAPLIFCSTSHSINVQKIFKIVVSKAFDLRCTIPRIE 217
Query: 260 TIGEPIIDF 268
G PI+++
Sbjct: 218 ETGAPILEY 226
>gi|402219698|gb|EJT99771.1| small monomeric GTPase [Dacryopinax sp. DJM-731 SS1]
Length = 217
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 55 LESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSP 114
+E + TT++ + ++ V LK+ ++GD IGKTS + KYV ++
Sbjct: 1 MEDTVSNDTTIQAPVRPQDGKIEEKTSVVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQ 60
Query: 115 GEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSV 174
G+N M+KT+ VR I++SIW++ G + + LP+ D++A+LFMFDL+ + TL SV
Sbjct: 61 TLGVNFMEKTISVRKTTITFSIWDLGGQREFVNMLPLVSNDAVALLFMFDLSRKSTLNSV 120
Query: 175 IRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYN 234
WY+QAR N++AIP +IGTKFD F QL D Q + QA+ +AKA++A L FSS + +
Sbjct: 121 KEWYRQARGFNKSAIPFLIGTKFDLFAQLGRDEQEEVTKQAKRFAKAMHAPLIFSSTSAS 180
Query: 235 INVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
INV KI K + AK FD+ + T+GEPI+ +
Sbjct: 181 INVQKIFKIVLAKAFDLKCVIPEIDTVGEPIVQY 214
>gi|170116620|ref|XP_001889500.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164635502|gb|EDQ99808.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 247
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SI
Sbjct: 26 DEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSI 85
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK
Sbjct: 86 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTK 145
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
FD F P D Q I QA+ +A+A++A+L F S + +INV KI K + AK FD+ +
Sbjct: 146 FDQFATFPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIP 205
Query: 257 RNLTIGEPII 266
+GEPI+
Sbjct: 206 EIEGVGEPIL 215
>gi|344233903|gb|EGV65773.1| small GTPase [Candida tenuis ATCC 10573]
Length = 200
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 121/197 (61%)
Query: 70 CHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRG 129
H + N VALK+ L+GD IGKTS + KYV + G+N MDK + +R
Sbjct: 1 MEEQEHDEQGNQVALKVGLIGDSQIGKTSLMVKYVEGTFDDDYIQTLGVNFMDKKIRIRN 60
Query: 130 ARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI 189
I++SIW++ G + + LP+ D+IA+LFMFDLT + TL S+ WY+Q R N+TAI
Sbjct: 61 TIITFSIWDLGGQKEFINMLPLVSNDAIAMLFMFDLTRKSTLNSIKEWYRQVRGFNKTAI 120
Query: 190 PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
P ++GTK+D+FI LP Q I QA+ +A A+ + + F S +++INV KI K I +K F
Sbjct: 121 PFLVGTKYDEFIDLPHQDQIEITQQAKKFANAMKSPVVFCSTSHSINVQKIFKIILSKAF 180
Query: 250 DIPWTLERNLTIGEPII 266
D+ LE +GEPI+
Sbjct: 181 DLKLNLEEITNVGEPIL 197
>gi|452985901|gb|EME85657.1| hypothetical protein MYCFIDRAFT_130727 [Pseudocercospora fijiensis
CIRAD86]
Length = 223
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 128/210 (60%), Gaps = 9/210 (4%)
Query: 66 RPSLCHSHRHLDADNL---------VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE 116
RP S D + V +K+ ++GD IGKTS + KYV ++
Sbjct: 9 RPPSTQSQGQFDQNGQRQQAQKNASVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTL 68
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
G+N M+KT+ +R I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+
Sbjct: 69 GVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKE 128
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
WY+Q R N+TAIP ++GTK+D F+ P + Q I+ QA+ +AKA+ A+L FSS +++IN
Sbjct: 129 WYRQGRGFNKTAIPFLVGTKYDHFVNFPREEQEEISLQAKRFAKAMKASLIFSSTSHSIN 188
Query: 237 VNKILKFITAKLFDIPWTLERNLTIGEPII 266
V KI K + +K FD+ T+ +GEP++
Sbjct: 189 VQKIFKIVLSKAFDLRCTIPEIENVGEPLL 218
>gi|336366022|gb|EGN94370.1| hypothetical protein SERLA73DRAFT_188215 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378696|gb|EGO19853.1| hypothetical protein SERLADRAFT_478249 [Serpula lacrymans var.
lacrymans S7.9]
Length = 226
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
Query: 67 PSLCHSHRHLDAD---NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDK 123
PS + H L+ + N V +K+ ++GD IGKTS + KYV ++ G+N M+K
Sbjct: 19 PSGQNPHPLLENNEEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEK 78
Query: 124 TLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK 183
T+ VR I++SIW++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR
Sbjct: 79 TISVRRTTITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARG 138
Query: 184 CNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKF 243
N+TAIP +IGTKFD F P D Q I QA+ +A+A++A+L F S + +INV KI K
Sbjct: 139 FNKTAIPFLIGTKFDTFATFPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKI 198
Query: 244 ITAKLFDIPWTLERNLTIGEPII 266
+ AK FD+ + IGEP++
Sbjct: 199 VLAKAFDLKCVIPEIEGIGEPVL 221
>gi|159124490|gb|EDP49608.1| GTP binding protein (SPG1), putative [Aspergillus fumigatus A1163]
Length = 388
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 137/235 (58%), Gaps = 18/235 (7%)
Query: 50 PSPSVLESGLVPGTTVRPSLCHSHRHLD-------ADNLVALKISLLGDCHIGKTSFLEK 102
PS S SGL G R + + + + N V +K+ ++GD IGKTS + K
Sbjct: 90 PSSSRPGSGLSSGPEQRQGISQTSQDVSQRPPSQPTKNSVVIKVGMVGDAQIGKTSLMVK 149
Query: 103 YVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFM 162
YV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D++AILFM
Sbjct: 150 YVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFM 209
Query: 163 FDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIA---------- 212
FDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+ P + Q I+
Sbjct: 210 FDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVNFPREDQEEISIQKMTRHVLM 269
Query: 213 -SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
SQA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+ IGEP++
Sbjct: 270 ISQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENIGEPLL 324
>gi|407923827|gb|EKG16890.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 347
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 124/185 (67%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 157 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 216
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 217 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 276
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P + Q I++QA+ +AKA+ A+L FSS +++INV KI K + +K FD+ T+ +
Sbjct: 277 NFPREEQEEISNQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLSKAFDLRCTIPEIENV 336
Query: 262 GEPII 266
GEP++
Sbjct: 337 GEPLL 341
>gi|353239293|emb|CCA71210.1| related to Ras-GTPase [Piriformospora indica DSM 11827]
Length = 221
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SI
Sbjct: 27 EEKNSVVVKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSI 86
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTK
Sbjct: 87 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKATLNSVKEWYRQARGFNKTAIPFLIGTK 146
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D F LP D Q I QA+ +AKA++A L F S +INV KI K I AK FD+ +
Sbjct: 147 YDLFASLPHDEQEEITKQAKRFAKAMHAGLVFCSTAASINVQKIFKIILAKAFDLKCVIP 206
Query: 257 RNLTIGEPIIDF 268
+GEPII +
Sbjct: 207 EIDAVGEPIIQY 218
>gi|448520296|ref|XP_003868272.1| Tem1 protein [Candida orthopsilosis Co 90-125]
gi|380352611|emb|CCG22838.1| Tem1 protein [Candida orthopsilosis]
Length = 198
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 120/192 (62%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D +N VALKI L+GD IGKTS + KYV ++ G+N MDK + +R I +SI
Sbjct: 6 DQNNQVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKRIQIRNTTIMFSI 65
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK
Sbjct: 66 WDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLIGTK 125
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D FI L Q I QA+ + A+ A + F S +++INV KI K I +K FD+ L+
Sbjct: 126 YDQFIDLSFQDQIEITQQAKKFGAAMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLD 185
Query: 257 RNLTIGEPIIDF 268
+ +GEPI+ F
Sbjct: 186 EIVNVGEPILIF 197
>gi|70992145|ref|XP_750921.1| GTP binding protein (SPG1) [Aspergillus fumigatus Af293]
gi|66848554|gb|EAL88883.1| GTP binding protein (SPG1), putative [Aspergillus fumigatus Af293]
Length = 389
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 137/235 (58%), Gaps = 18/235 (7%)
Query: 50 PSPSVLESGLVPGTTVRPSLCHSHRHLD-------ADNLVALKISLLGDCHIGKTSFLEK 102
PS S SGL G R + + + + N V +K+ ++GD IGKTS + K
Sbjct: 91 PSSSRPGSGLSSGPEQRQGISQTSQDVSQRPPSQPTKNSVVIKVGMVGDAQIGKTSLMVK 150
Query: 103 YVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFM 162
YV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D++AILFM
Sbjct: 151 YVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFM 210
Query: 163 FDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIA---------- 212
FDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+ P + Q I+
Sbjct: 211 FDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFVNFPREDQEEISIQKMTRHVLM 270
Query: 213 -SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
SQA+ +AKA+ A+L FSS +++INV KI K + AK FD+ T+ IGEP++
Sbjct: 271 ISQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIPEIENIGEPLL 325
>gi|395331578|gb|EJF63959.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 277
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 121/187 (64%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ +LGD IGKTS + KYV ++ G+N M+KT+ VR I++S+W++
Sbjct: 30 NNVVIKVGMLGDSQIGKTSLMVKYVEGHFDEDYIQTLGVNFMEKTISVRRTSITFSLWDL 89
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTKFD
Sbjct: 90 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDT 149
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F P D Q I QA+ +AKA++A+L F S + +INV KI K + AK FD+ +
Sbjct: 150 FSTFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPEID 209
Query: 260 TIGEPII 266
+GEPI+
Sbjct: 210 GVGEPIL 216
>gi|390596104|gb|EIN05507.1| small monomeric GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 223
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 120/185 (64%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SIW++ G
Sbjct: 34 VVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTITFSIWDLGG 93
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP +IGTKFD F
Sbjct: 94 QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLIGTKFDTFA 153
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P D Q I QA+ +AKA++A+L F S + +INV KI K + AK FD+ + +
Sbjct: 154 TFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKIVLAKAFDLKCVIPEIEGV 213
Query: 262 GEPII 266
GEPI+
Sbjct: 214 GEPIL 218
>gi|302410263|ref|XP_003002965.1| septum-promoting GTP-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261357989|gb|EEY20417.1| septum-promoting GTP-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 184
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 120/179 (67%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G + +
Sbjct: 1 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 60
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D F+ P +
Sbjct: 61 MLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPRED 120
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
Q I++QAR +AKA+ A L FSS +++INV KI K + +K FD+ T+ +GEP++
Sbjct: 121 QEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIENVGEPLL 179
>gi|392576044|gb|EIW69176.1| hypothetical protein TREMEDRAFT_44341 [Tremella mesenterica DSM
1558]
Length = 216
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 120/187 (64%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + LK+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 25 NAIVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 84
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + LP+ C D++AILFMFDLT + TL SV WY+QAR N+TAIP++IGTK+D
Sbjct: 85 GGQREFVSMLPLVCNDAVAILFMFDLTRKATLNSVKEWYRQARGFNKTAIPVLIGTKYDT 144
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F D Q I QA+ ++KA++A L F S +++INV KI K + AK FD+ +
Sbjct: 145 FATFSRDEQEEITKQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKCVIPEID 204
Query: 260 TIGEPII 266
+GEPI+
Sbjct: 205 EVGEPIL 211
>gi|354544267|emb|CCE40990.1| hypothetical protein CPAR2_110280 [Candida parapsilosis]
Length = 200
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 120/192 (62%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D +N VALK+ L+GD IGKTS + KYV ++ G+N MDK + +R I +SI
Sbjct: 8 DQNNQVALKVGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKRIQIRNTTIMFSI 67
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ D++AILFMFDLT + TL S+ +Y+Q R N+TAIP +IGTK
Sbjct: 68 WDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEFYRQVRGFNKTAIPFLIGTK 127
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D FI L Q I QA+ + A+ A + F S +++INV KI K I +K FD+ LE
Sbjct: 128 YDQFIDLSFQDQIEITQQAKKFGAAMKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLE 187
Query: 257 RNLTIGEPIIDF 268
+ +GEPI+ F
Sbjct: 188 EIVNVGEPILIF 199
>gi|150865994|ref|XP_001385439.2| hypothetical protein PICST_62699 [Scheffersomyces stipitis CBS
6054]
gi|149387250|gb|ABN67410.2| GTP-binding protein of the ras superfamily [Scheffersomyces
stipitis CBS 6054]
Length = 199
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 120/188 (63%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+N VALKI L+GD IGKTS + KYV ++ G+N MDK + +R I++SIW+
Sbjct: 9 NNQVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWD 68
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
+ G + + LP+ D++AILFMFDLT + TL S+ WY+Q R N+TA+P +IGTK+D
Sbjct: 69 LGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTALPFLIGTKYD 128
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
FI L Q I SQA+ + +A+ A + F S +++INV KI K I +K FD+ L+
Sbjct: 129 QFIDLSYQDQVEITSQAKKFGRAMKAPVIFCSTSHSINVQKIFKIILSKAFDLRLNLDEI 188
Query: 259 LTIGEPII 266
IGEPI+
Sbjct: 189 NNIGEPIL 196
>gi|68469427|ref|XP_721228.1| potential Ras family GTPase [Candida albicans SC5314]
gi|46443137|gb|EAL02421.1| potential Ras family GTPase [Candida albicans SC5314]
Length = 226
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Query: 70 CHSHRHLDADN---LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
CH + + N VALKI L+GD IGKTS + KYV ++ G+N MDK +
Sbjct: 24 CHFYFIISCTNSFIRVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQ 83
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ 186
+R I++SIW++ G + + LP+ D++AILFMFDLT + TL S+ WY+Q R N+
Sbjct: 84 IRNTTITFSIWDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNK 143
Query: 187 TAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
TAIP ++GTK+D FI L Q I QA+ + A+ A + F S +++INV KI K I +
Sbjct: 144 TAIPFLVGTKYDQFIDLSFQDQIEITQQAKKFGSAMKAPVIFCSTSHSINVQKIFKIILS 203
Query: 247 KLFDIPWTLERNLTIGEPII 266
K FD+ L+ + +GEPI+
Sbjct: 204 KAFDLKLNLDEIVNVGEPIL 223
>gi|68468881|ref|XP_721499.1| potential Ras family GTPase [Candida albicans SC5314]
gi|46443419|gb|EAL02701.1| potential Ras family GTPase [Candida albicans SC5314]
Length = 226
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 3/200 (1%)
Query: 70 CHSHRHLDADN---LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
CH + + N VALKI L+GD IGKTS + KYV ++ G+N MDK +
Sbjct: 24 CHFYFIISCTNSFIRVALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQ 83
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ 186
+R I++SIW++ G + + LP+ D++AILFMFDLT + TL S+ WY+Q R N+
Sbjct: 84 IRNTTITFSIWDLGGQKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNK 143
Query: 187 TAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
TAIP ++GTK+D FI L Q I QA+ + A+ A + F S +++INV KI K I +
Sbjct: 144 TAIPFLVGTKYDQFIDLSFQDQIEITQQAKKFGSAMKAPVIFCSTSHSINVQKIFKIILS 203
Query: 247 KLFDIPWTLERNLTIGEPII 266
K FD+ L+ + +GEPI+
Sbjct: 204 KAFDLKLNLDEIVNVGEPIL 223
>gi|443897609|dbj|GAC74949.1| ras GTPases [Pseudozyma antarctica T-34]
Length = 275
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 132/229 (57%), Gaps = 13/229 (5%)
Query: 38 RYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKT 97
R+R L RS + S L + RPS S V LK+ ++GD IGKT
Sbjct: 33 RHRCLCRSNDLNASQQTLSH-----SNQRPSFSQSS--------VILKVGMVGDSQIGKT 79
Query: 98 SFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSI 157
S + +YV + G+N M+KT+ +R I++SIW++ G + + LP+ C D++
Sbjct: 80 SLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAV 139
Query: 158 AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARA 217
AILFMFDLT + TL S+ WY+QAR N+TAIP ++GTK+D + LP + Q I QAR
Sbjct: 140 AILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYATLPREEQDEITKQARR 199
Query: 218 YAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
++KA+ A L F S ++ INV KI K + AK FD+ T+ GEP++
Sbjct: 200 FSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGPGEPLL 248
>gi|428162470|gb|EKX31612.1| hypothetical protein GUITHDRAFT_160353 [Guillardia theta CCMP2712]
Length = 213
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 124/187 (66%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R A I++SIW++ G
Sbjct: 27 VVVKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTVSIRNANITFSIWDLGG 86
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D+ AILFMFDL+ TLKSV WY+QAR N+TA+ I++GTK+D F
Sbjct: 87 QKEFINMLPLVCNDAAAILFMFDLSRVGTLKSVKEWYRQARGFNKTAVAILVGTKYDIFA 146
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
+ Q I QAR YAKA+ A L FSSA+++INV K+ K + +++FD+ + + +
Sbjct: 147 SYTPEEQADITKQARRYAKAMKAPLIFSSASHSINVQKLFKILLSRVFDLKCNIPKIVND 206
Query: 262 GEPIIDF 268
GEPI+++
Sbjct: 207 GEPILEY 213
>gi|448089001|ref|XP_004196690.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
gi|448093180|ref|XP_004197721.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
gi|359378112|emb|CCE84371.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
gi|359379143|emb|CCE83340.1| Piso0_003915 [Millerozyma farinosa CBS 7064]
Length = 217
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 118/185 (63%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
VALKI L+GD IGKTS + KYV ++ G+N MDK + ++ I++SIW++ G
Sbjct: 30 VALKIGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMDKKIQIKNTVITFSIWDLGG 89
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D FI
Sbjct: 90 QKEFINMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFI 149
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
L Q+ I QA+ Y A+ A + F S +++INV KI K I +K FD+ L+ + +
Sbjct: 150 DLSHQDQYEITQQAKKYGSAMKAPVIFCSTSHSINVQKIFKIILSKAFDLRLNLDEIVNV 209
Query: 262 GEPII 266
GEPI+
Sbjct: 210 GEPIL 214
>gi|328853775|gb|EGG02911.1| hypothetical protein MELLADRAFT_49666 [Melampsora larici-populina
98AG31]
Length = 220
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 120/190 (63%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SI
Sbjct: 26 DDKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSI 85
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TAIP +IGTK
Sbjct: 86 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLIGTK 145
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D F D Q I Q+R +AKA+ A L F S +++INV KI K + +K FD+ T+
Sbjct: 146 YDHFAAFSKDEQEEITRQSRRFAKAMRAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTIP 205
Query: 257 RNLTIGEPII 266
GEP++
Sbjct: 206 EINGSGEPLL 215
>gi|396477150|ref|XP_003840208.1| hypothetical protein LEMA_P109940.1 [Leptosphaeria maculans JN3]
gi|312216779|emb|CBX96729.1| hypothetical protein LEMA_P109940.1 [Leptosphaeria maculans JN3]
Length = 429
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 122/185 (65%), Gaps = 3/185 (1%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 243 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 302
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D F+
Sbjct: 303 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDHFV 362
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P D Q I++QAR +A+A+ A+L FSS +++IN I K + +K FD+ T+ +
Sbjct: 363 NFPRDEQEEISNQARRFARAMKASLIFSSTSHSIN---IFKIVLSKAFDLKCTIPEIENV 419
Query: 262 GEPII 266
GEP++
Sbjct: 420 GEPLL 424
>gi|331227584|ref|XP_003326460.1| septum-promoting GTP-binding protein 1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309305450|gb|EFP82041.1| septum-promoting GTP-binding protein 1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 239
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 119/187 (63%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 48 NSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 107
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TAIP +IGTK+D
Sbjct: 108 GGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLIGTKYDH 167
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F D Q I Q+R +AKA+ A L F S +++INV KI K + +K FD+ T+
Sbjct: 168 FAAFSKDEQEEITRQSRRFAKAMRAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTIPEIT 227
Query: 260 TIGEPII 266
GEP++
Sbjct: 228 GSGEPLL 234
>gi|115399058|ref|XP_001215118.1| septum-promoting GTP-binding protein 1 [Aspergillus terreus
NIH2624]
gi|114192001|gb|EAU33701.1| septum-promoting GTP-binding protein 1 [Aspergillus terreus
NIH2624]
Length = 312
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 124/203 (61%), Gaps = 16/203 (7%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 105 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 164
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 165 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 224
Query: 200 FIQLPIDLQWTIASQ----------------ARAYAKALNATLFFSSATYNINVNKILKF 243
F+ P + Q I+ Q A+ +AKA+ A+L FSS +++INV KI K
Sbjct: 225 FVNFPREDQEEISIQVRHIPRRGIPCTDGLKAKRFAKAMKASLIFSSTSHSINVQKIFKI 284
Query: 244 ITAKLFDIPWTLERNLTIGEPII 266
+ AK FD+ T+ IGEP++
Sbjct: 285 VLAKAFDLKCTIPEIENIGEPLL 307
>gi|343425098|emb|CBQ68635.1| probable TEM1-GTP-binding protein of the RAS superfamily
[Sporisorium reilianum SRZ2]
Length = 214
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 118/185 (63%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ ++GD IGKTS + +YV + G+N M+KT+ +R I++SIW++ G
Sbjct: 25 VILKVGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 84
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+QAR N+TAIP ++GTK+D +
Sbjct: 85 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYA 144
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
LP + Q I QAR ++KA+ A L F S ++ INV KI K + AK FD+ T+
Sbjct: 145 TLPREEQDEITKQARRFSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGA 204
Query: 262 GEPII 266
GEP++
Sbjct: 205 GEPLL 209
>gi|358056852|dbj|GAA97202.1| hypothetical protein E5Q_03878 [Mixia osmundae IAM 14324]
Length = 236
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 120/190 (63%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V +K+ ++GD IGKTS + KYV ++ G+N M+K++ +R I++SI
Sbjct: 42 DDRNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKSISIRNTEITFSI 101
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TAIP ++GTK
Sbjct: 102 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLVGTK 161
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D F L Q + QA+ +AKA+ A L F S +++INV KI K + +K FD+ TL
Sbjct: 162 YDHFSTLAESEQEDVTRQAKRFAKAMKAPLIFCSTSHSINVQKIFKIVLSKAFDLKCTLP 221
Query: 257 RNLTIGEPII 266
GEP++
Sbjct: 222 EITETGEPLL 231
>gi|71019857|ref|XP_760159.1| hypothetical protein UM04012.1 [Ustilago maydis 521]
gi|46099876|gb|EAK85109.1| hypothetical protein UM04012.1 [Ustilago maydis 521]
gi|68051237|tpe|CAI77247.1| TPA: Ras-GTPase [Ustilago maydis 521]
Length = 297
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 118/185 (63%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ ++GD IGKTS + +YV + G+N M+KT+ +R I++SIW++ G
Sbjct: 34 VILKVGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 93
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+QAR N+TAIP ++GTK+D +
Sbjct: 94 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYA 153
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
LP + Q I QAR ++KA+ A L F S ++ INV KI K + AK FD+ T+
Sbjct: 154 TLPREEQDEITKQARRFSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGP 213
Query: 262 GEPII 266
GEP++
Sbjct: 214 GEPLL 218
>gi|321264910|ref|XP_003197172.1| small monomeric GTPase [Cryptococcus gattii WM276]
gi|317463650|gb|ADV25385.1| Small monomeric GTPase, putative [Cryptococcus gattii WM276]
Length = 193
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 117/185 (63%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ LK+ ++GD IGKTS + KYV ++ G+N M+K + +R I++SIW++ G
Sbjct: 4 IVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAISIRNTEITFSIWDLGG 63
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ LP+ D++AILFMFDLT + TL SV WY+QAR N+TAIP++IGTK+D F
Sbjct: 64 QREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKYDQFA 123
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P Q I QA+ ++KA++A L F S +++INV KI K + AK FD+ + +
Sbjct: 124 SFPRGEQEEITRQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKCVIPEIDAV 183
Query: 262 GEPII 266
GEPI+
Sbjct: 184 GEPIL 188
>gi|409043843|gb|EKM53325.1| hypothetical protein PHACADRAFT_259605 [Phanerochaete carnosa
HHB-10118-sp]
Length = 224
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
Query: 67 PSLCHSHRHLDADNL---VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDK 123
PS +S + + D+ V +K+ ++GD IGKTS + KYV ++ G+N M+K
Sbjct: 17 PSFQNSRQSENGDDKNSSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEK 76
Query: 124 TLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK 183
T+ VR I++SIW++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR
Sbjct: 77 TITVRRTTITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARG 136
Query: 184 CNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKF 243
N+TAIP +IGTKFD F P D Q I QA+ +AKA++A+L F S + +INV KI K
Sbjct: 137 FNKTAIPFLIGTKFDTFSTFPRDEQEEITKQAKRFAKAMHASLIFCSTSASINVQKIFKI 196
Query: 244 ITAKLFDIPWTLERNLTIGEPII 266
+ AK FD+ + +GEPI+
Sbjct: 197 VLAKAFDLKCVIPEIEGVGEPIL 219
>gi|58270378|ref|XP_572345.1| small monomeric GTPase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117828|ref|XP_772295.1| hypothetical protein CNBL1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254908|gb|EAL17648.1| hypothetical protein CNBL1630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228603|gb|AAW45038.1| small monomeric GTPase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 193
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 117/185 (63%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ LK+ ++GD IGKTS + KYV ++ G+N M+K + +R I++SIW++ G
Sbjct: 4 IVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAISIRNTEITFSIWDLGG 63
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ LP+ D++AILFMFDLT + TL SV WY+QAR N+TAIP++IGTK+D F
Sbjct: 64 QREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKYDQFA 123
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
P Q I QA+ ++KA++A L F S +++INV KI K + AK FD+ + +
Sbjct: 124 SFPRAEQEEITRQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKCVIPEIDAV 183
Query: 262 GEPII 266
GEPI+
Sbjct: 184 GEPIL 188
>gi|388580622|gb|EIM20935.1| small monomeric GTPase [Wallemia sebi CBS 633.66]
Length = 191
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 120/183 (65%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK +L+GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 5 LKTALVGDSSIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISIRQTEITFSIWDLGGQR 64
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TAIP ++GTKFD F L
Sbjct: 65 EFVNMLPLVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAIPFLVGTKFDIFAGL 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGE 263
P + Q I QA+ +AKA++A L F S +++I+V KI K + +K FD+ T+ GE
Sbjct: 125 PKEDQDEITKQAKRFAKAMHAPLIFCSTSHSIHVQKIFKIVLSKAFDLKCTIPEVHESGE 184
Query: 264 PII 266
P++
Sbjct: 185 PLL 187
>gi|298714110|emb|CBJ27291.1| SPG1, Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 237
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 127/200 (63%)
Query: 69 LCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR 128
+ + H + N V +K+ ++GD +GKT+ + KYV ++ ++ G+N M+KT+ +R
Sbjct: 1 MAETKAHDASRNNVVVKVGMVGDAQVGKTTLMVKYVENKFDEEYIMTLGVNFMEKTITLR 60
Query: 129 GARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTA 188
I++SIW++ G + LP+ C D++AI FMFDL+ + TL SV WY+Q R N++A
Sbjct: 61 NTEITFSIWDLGGQREFLSMLPLVCNDAVAIFFMFDLSRKSTLNSVKEWYRQVRGLNRSA 120
Query: 189 IPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++GTK+D + +P + Q I QAR +AKA++A L F+SA+++INV K+ K + +++
Sbjct: 121 YAFLVGTKYDLYTSMPAEEQRDIDKQARKFAKAMHAPLIFTSASHSINVQKMFKVVLSRV 180
Query: 249 FDIPWTLERNLTIGEPIIDF 268
FD+ L+ GEP++ F
Sbjct: 181 FDLRCNLDEISGAGEPLLLF 200
>gi|326533162|dbj|BAJ93553.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 105
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/96 (76%), Positives = 88/96 (91%)
Query: 173 SVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSAT 232
S+ WY++ARK N+TAIPI+IGTKFDDF QLP+++QWTI QARAYA+A+ ATLFFSSAT
Sbjct: 10 SITDWYERARKWNKTAIPILIGTKFDDFAQLPLEMQWTIVDQARAYARAMKATLFFSSAT 69
Query: 233 YNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
+NINVNKI KFITAKLF++PWT+ERNLT+GEPIIDF
Sbjct: 70 HNINVNKIFKFITAKLFNLPWTVERNLTVGEPIIDF 105
>gi|388857496|emb|CCF48852.1| probable Ras-GTPase [Ustilago hordei]
Length = 216
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 117/185 (63%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V LK+ ++GD IGKTS + +YV + G+N M+KT+ +R I++SIW++ G
Sbjct: 27 VILKVGMVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 86
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+QAR N+TAIP ++GTK+D +
Sbjct: 87 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPFLVGTKYDHYA 146
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
LP + Q I QA ++KA+ A L F S ++ INV KI K + AK FD+ T+
Sbjct: 147 TLPREEQDEITKQATRFSKAMKAPLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGG 206
Query: 262 GEPII 266
GEP++
Sbjct: 207 GEPLL 211
>gi|405124177|gb|AFR98939.1| septum-promoting GTP-binding protein 1 [Cryptococcus neoformans
var. grubii H99]
Length = 232
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 123/203 (60%), Gaps = 16/203 (7%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + LK+ ++GD IGKTS + KYV ++ G+N M+K + +R I++SIW++
Sbjct: 25 NSIVLKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAISIRNTEITFSIWDL 84
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + LP+ D++AILFMFDLT + TL S+ WY+QAR N+TAIP++IGTK+D
Sbjct: 85 GGQREFVSMLPLVSNDAVAILFMFDLTRKSTLNSIKEWYRQARGFNKTAIPVLIGTKYDQ 144
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD----IPWTL 255
F P + Q I QA+ ++KA++A L F S +++INV KI K + AK FD +P ++
Sbjct: 145 FASFPREEQEEITRQAKRFSKAMHAPLIFCSTSHSINVQKIFKIVLAKAFDLKACLPHSM 204
Query: 256 ERNLT------------IGEPII 266
LT +GEPI+
Sbjct: 205 RSILTFHSQCVIPEIDAVGEPIL 227
>gi|393229996|gb|EJD37608.1| small monomeric GTPase [Auricularia delicata TFB-10046 SS5]
Length = 217
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 121/190 (63%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SI
Sbjct: 23 DDKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTITVRRTTITFSI 82
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP ++GTK
Sbjct: 83 WDLGGQREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLVGTK 142
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
FD F P D Q I QA+ +A+A+ A+L F S + +INV KI K + AK FD+ +
Sbjct: 143 FDVFSTFPRDEQEEITKQAKRFARAMKASLIFCSTSASINVQKIFKIVLAKAFDLKCVIP 202
Query: 257 RNLTIGEPII 266
+GEP++
Sbjct: 203 EIEGVGEPVL 212
>gi|50549767|ref|XP_502355.1| YALI0D03157p [Yarrowia lipolytica]
gi|49648223|emb|CAG80543.1| YALI0D03157p [Yarrowia lipolytica CLIB122]
Length = 200
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 122/187 (65%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V+LKI L+GD IGKTS + KY ++ G+N M+KT+ +R I++ IW++
Sbjct: 7 NSVSLKIGLIGDAQIGKTSLMVKYAEGNFDEDYVQTLGVNFMEKTVSIRDTEITFLIWDL 66
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ DS+AILFMFDLT + TL SV WY+QAR N+TAIP ++GTK+D
Sbjct: 67 GGQREFVNMLPLVSNDSVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPFLVGTKYDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+QLP + Q I QA+ +AKA+ A+L F S +++INV KI K + +K FD+ T+
Sbjct: 127 FVQLPKEDQEEITQQAKKFAKAMKASLIFCSTSHSINVQKIFKIVLSKAFDLKLTIPEIT 186
Query: 260 TIGEPII 266
GEPI+
Sbjct: 187 NTGEPIL 193
>gi|171692925|ref|XP_001911387.1| hypothetical protein [Podospora anserina S mat+]
gi|170946411|emb|CAP73212.1| unnamed protein product [Podospora anserina S mat+]
Length = 347
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 120/187 (64%), Gaps = 6/187 (3%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 162 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 221
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+D
Sbjct: 222 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPVLVGTKYDH 281
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ L + Q I++Q A+ A L FSS +++INV KI K + +K FD+ T+
Sbjct: 282 FVNLSREEQEEISTQ------AMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTIPEIS 335
Query: 260 TIGEPII 266
+GEP++
Sbjct: 336 NVGEPLL 342
>gi|323448670|gb|EGB04565.1| hypothetical protein AURANDRAFT_32347 [Aureococcus anophagefferens]
Length = 196
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 121/187 (64%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD +GKT+ + KYV + + G+N M+K++ +R I++SIW++ G
Sbjct: 10 VMVKVGMVGDSQVGKTTMMVKYVENRLDDEYIQTLGVNFMEKSITLRNTEITFSIWDLGG 69
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ LP+ C D+ A+LFMFDL+ + TL S+ WY+Q R N++A +++GTK+D F+
Sbjct: 70 HREFLSMLPLVCNDAAAVLFMFDLSRKSTLTSIKEWYRQVRGLNRSAFALLVGTKYDVFV 129
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
LP + Q I AR +AKA+ A F+SA +INV K+ K I +++FD+ TLE+ + +
Sbjct: 130 TLPPEEQAEIDRNARKFAKAMKAPCIFTSAHESINVQKMFKVILSRVFDLKCTLEKLVEV 189
Query: 262 GEPIIDF 268
GEP++ F
Sbjct: 190 GEPLLIF 196
>gi|348688068|gb|EGZ27882.1| hypothetical protein PHYSODRAFT_472500 [Phytophthora sojae]
Length = 181
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 116/181 (64%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
++GD +GKTS + KYV + ++ G+N M+KT+ +R I++SIW++ G +
Sbjct: 1 MVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTIALRNTEITFSIWDLGGHREFIS 60
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
LP+ C D++AILFMFDL+ + TL S+ WY+Q R N+ A P ++G K+D F ++
Sbjct: 61 MLPLVCNDAVAILFMFDLSRKATLTSIKEWYRQVRSINKNAFPFLVGMKYDHFANFAVEE 120
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIID 267
Q I QAR +AKA+ A L F+SA+++INV K+ K + +K+FD+ T+ +G+PI+
Sbjct: 121 QEDITKQARKFAKAMKAPLIFTSASHSINVQKVFKVVLSKVFDLKCTVPIIDRVGDPILQ 180
Query: 268 F 268
+
Sbjct: 181 Y 181
>gi|301116934|ref|XP_002906195.1| septum-promoting GTP-binding protein 1 [Phytophthora infestans
T30-4]
gi|262107544|gb|EEY65596.1| septum-promoting GTP-binding protein 1 [Phytophthora infestans
T30-4]
Length = 181
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 115/181 (63%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
++GD +GKTS + KYV + ++ G+N M+KT+ +R I++SIW++ G +
Sbjct: 1 MVGDAQVGKTSLMVKYVEGKFDEDYIHTLGVNFMEKTIALRNTEITFSIWDLGGHREFIS 60
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
LP+ C D++AILFMFDL+ + TL S+ WY+Q R N+ A P ++G K+D F +
Sbjct: 61 MLPLVCNDAVAILFMFDLSRKATLTSIKEWYRQVRSINKNAFPFLVGMKYDHFANFAAEE 120
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIID 267
Q I QAR +AKA+ A L F+SA+++INV K+ K + +K+FD+ T+ +G+PI+
Sbjct: 121 QEDITKQARKFAKAMKAPLIFTSASHSINVQKVFKVVLSKVFDLKCTVPIIDRVGDPILQ 180
Query: 268 F 268
+
Sbjct: 181 Y 181
>gi|290999088|ref|XP_002682112.1| ras family small GTPase [Naegleria gruberi]
gi|284095738|gb|EFC49368.1| ras family small GTPase [Naegleria gruberi]
Length = 195
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 117/186 (62%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+K+ +LGD +GKTS + KYV + ++ G+N ++K + ++ ++ IW++ G
Sbjct: 9 VVKVGMLGDVQVGKTSLMVKYVNGKFDEDYIMTLGVNFLEKKVQIKNTEVNLMIWDLGGQ 68
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ 202
+ L + C DS+A+ FMFDLT + TL+SV W+ +RK N+ A+P +IGTK+D F+
Sbjct: 69 KEFMSMLDLVCNDSLALFFMFDLTRKQTLRSVKDWFLHSRKYNKRALPFLIGTKYDKFVD 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
LP + Q I +QAR YA+ + L + SA IN+ K+ K + AK+FD P ++++ IG
Sbjct: 129 LPKEDQEDITAQARKYAEKMKCPLIYCSAAAGINIKKLFKLVLAKVFDFPPSIDKITAIG 188
Query: 263 EPIIDF 268
EPI+++
Sbjct: 189 EPILEY 194
>gi|430814096|emb|CCJ28623.1| unnamed protein product [Pneumocystis jirovecii]
Length = 188
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 105/152 (69%)
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
G+N M+KT+ +R I++SIW++ G + + LP+ C D++AILFMFDLT + TL S+
Sbjct: 34 GVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKE 93
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
WY+QAR N+TAIP ++GTK+D F P + Q I QAR +A+A+ A+L F S +++IN
Sbjct: 94 WYRQARGFNKTAIPFLVGTKYDHFANFPKEDQEEITKQARRFARAMKASLIFCSTSHSIN 153
Query: 237 VNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
V KI K + +K FD+ T+ + IGEPI+++
Sbjct: 154 VQKIFKIVLSKAFDLKCTIPEIINIGEPILEY 185
>gi|443915273|gb|ELU36795.1| small monomeric GTPase [Rhizoctonia solani AG-1 IA]
Length = 307
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 119/206 (57%), Gaps = 26/206 (12%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQG---------------GSPGEGLNMM 121
D N V +K+ ++GD IGKTS + KYV ++ SP G+N M
Sbjct: 20 DEKNSVVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGMYLYPFSDVRSPPPGVNFM 79
Query: 122 DKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA 181
+KT+ VR I++SIW++ G + + LP+ C D++AILFMFDLT + TL SV WY+
Sbjct: 80 EKTISVRRTTITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSVKEWYR-- 137
Query: 182 RKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
QTAIP +IGTKFD F P D Q I QA+ +AKA++A+L FSS + +INV KI
Sbjct: 138 ----QTAIPFLIGTKFDTFSTFPRDEQEEITKQAKRFAKAMHASLIFSSTSASINVQKIF 193
Query: 242 KFITAK-----LFDIPWTLERNLTIG 262
K + AK L P + N+++G
Sbjct: 194 KIVLAKVRRNDLLAYPLVFKCNVSLG 219
>gi|320587722|gb|EFX00197.1| GTP-binding protein [Grosmannia clavigera kw1407]
Length = 495
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 115/203 (56%), Gaps = 25/203 (12%)
Query: 53 SVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG 112
S G P R S H+ + + N V +K+ ++GD IGKTS +
Sbjct: 83 SASAGGAYPDHASRGSGAHAEPN-NGRNHVVIKVGMVGDAQIGKTSLM------------ 129
Query: 113 SPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLK 172
+ +R I++SIW++ G + + LP+ C D++AILFMFDLT + TL
Sbjct: 130 ------------VNIRNTEITFSIWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLN 177
Query: 173 SVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSAT 232
S+ WY+Q R N+TAIPI++GTK+D F+ P + Q I++QAR +AKA+ A L FSS +
Sbjct: 178 SIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPREDQEEISNQARRFAKAMRAALIFSSTS 237
Query: 233 YNINVNKILKFITAKLFDIPWTL 255
++ NV KI K + +K FD+ T+
Sbjct: 238 HSNNVQKIFKIVLSKAFDLKCTI 260
>gi|149243794|ref|XP_001526528.1| septum-promoting GTP-binding protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146448922|gb|EDK43178.1| septum-promoting GTP-binding protein 1 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 170
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 103/167 (61%)
Query: 102 KYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILF 161
KYV ++ G+N MDK + +R I +SIW++ G + + LP+ D++AILF
Sbjct: 3 KYVEGSFDEDYIQTLGVNFMDKRIQIRNTTIMFSIWDLGGQKEFINMLPLVSNDAVAILF 62
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLT + TL S+ WY+Q R N+TAIP ++GTK+D FI LP Q I QA+ + A
Sbjct: 63 MFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDLPFQDQIEITQQAKKFGAA 122
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
+ A + F S +++INV KI K I +K FDI LE + +GEPI+ F
Sbjct: 123 MKAPVIFCSTSHSINVQKIFKIILSKAFDIRLNLEEIVNVGEPILIF 169
>gi|393230001|gb|EJD37613.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 449
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 110/167 (65%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ VR I++SIW++ G
Sbjct: 127 VVIKVGMVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTITVRRTTITFSIWDLGG 186
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDL+ + TL SV WY+QAR N+TAIP ++GTKFD F
Sbjct: 187 QREFVNMLPLVCNDAVAILFMFDLSRKSTLNSVKEWYRQARGFNKTAIPFLVGTKFDVFS 246
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
P D Q I QA+ +A+A+ A+L F S + +INV KI K + AK+
Sbjct: 247 TFPRDEQEEITKQAKRFARAMKASLIFCSTSTSINVQKIFKIVLAKV 293
>gi|452824023|gb|EME31029.1| small GTP-binding protein of Rab family [Galdieria sulphuraria]
Length = 184
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 109/160 (68%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + +K +L+GD +GKTS + KYV + ++ G+N M+K + V+ I++SIW++
Sbjct: 20 NNIVVKTALIGDPFVGKTSLMVKYVEGKFDEDYIQTLGVNFMEKNIYVKNLEITFSIWDL 79
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G LP+A D++AI+FMFDLT + TL++V WY+Q+R N++A+P ++GTKFD
Sbjct: 80 GGQKDFVTMLPLALSDTVAIVFMFDLTRKITLQNVKEWYRQSRIYNKSALPFLVGTKFDG 139
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
FI LP + Q TI Q+R +A+A+ A L FSSA+++INV K
Sbjct: 140 FITLPKEEQITIIEQSRKFARAMKAPLIFSSASHSINVQK 179
>gi|42573674|ref|NP_974933.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|124301146|gb|ABN04825.1| At5g54840 [Arabidopsis thaliana]
gi|332009164|gb|AED96547.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 215
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 116/192 (60%), Gaps = 12/192 (6%)
Query: 1 MVQFNLKRRIERGVLILRRCISCFWEKLLMCS--VGKPIRYRMLPRSTVTSPSPSVLESG 58
+V N K RI V I W K++ CS + KPI YR + ++S + + +
Sbjct: 19 IVHVNRKWRIIERVSIFGDFFRFLWRKIVSCSSIIEKPILYRRIVHK-ISSTAGDIFDGD 77
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVAL---KISLLGDCHIGKTSFLEKYVGDEKEQGGSPG 115
TT P++ S R + + L KISLLGDC GKT+F+ KYVGDE Q
Sbjct: 78 --DDTTTEPTV--SGRRFGSSSDSDLVSLKISLLGDCQTGKTTFVVKYVGDE-NQSFLEM 132
Query: 116 EGLNMMDKTLLVRGARISYSIWEVTGDAK-AQDHLPVACKDSIAILFMFDLTSRCTLKSV 174
GLN+MDKT V+G IS+SIW+V GD K ++DH+P+ACKD++AILFMFDLTSR TL SV
Sbjct: 133 TGLNLMDKTFYVQGVTISFSIWDVGGDEKRSKDHIPIACKDAVAILFMFDLTSRSTLNSV 192
Query: 175 IRWYQQARKCNQ 186
WY QARK N+
Sbjct: 193 FGWYSQARKWNK 204
>gi|440798952|gb|ELR20013.1| GTP binding protein [Acanthamoeba castellanii str. Neff]
Length = 215
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 124/207 (59%), Gaps = 7/207 (3%)
Query: 62 GTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMM 121
TT + + + + D N V +K+ ++GD +GKTS + KYV ++ ++ G+N M
Sbjct: 16 NTTCKMADKYKRKGKDGKNEVVIKVGMVGDSEVGKTSLMVKYVENKFDEDYICTLGVNFM 75
Query: 122 DKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA 181
+KT+ + IS+SIW++ G + LP+ C+D+ AILFMFDLT + TL SV
Sbjct: 76 EKTVTLGKNEISFSIWDLGGSREFITMLPLVCEDAEAILFMFDLTRKSTLISV------- 128
Query: 182 RKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
R+ +TA P +IGTK+D F Q + Q I QAR +AKA+ A L F SA +INV KI
Sbjct: 129 REHTKTARPFLIGTKYDLFAQKEQEEQEEITKQARKFAKAMKAPLIFCSAHSSINVQKIF 188
Query: 242 KFITAKLFDIPWTLERNLTIGEPIIDF 268
K + AK F++ T+E +GEPI+++
Sbjct: 189 KIVLAKAFELKCTIEPITKVGEPILEY 215
>gi|260951005|ref|XP_002619799.1| hypothetical protein CLUG_00958 [Clavispora lusitaniae ATCC 42720]
gi|238847371|gb|EEQ36835.1| hypothetical protein CLUG_00958 [Clavispora lusitaniae ATCC 42720]
Length = 176
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 104/165 (63%)
Query: 102 KYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILF 161
KYV ++ G+N MDK + +R I++SIW++ G + + LP+ D++AILF
Sbjct: 3 KYVEGSFDEDYIQTLGVNFMDKKIQIRSTNITFSIWDLGGQKEFINMLPLVSNDAVAILF 62
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLT + TL S+ WY+Q R N+TAIP ++GTK+D+FI L Q I QA+ + +A
Sbjct: 63 MFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDEFIDLQPQDQLEITQQAKRFGRA 122
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ A + F S +++INV KI K I +K FD+ +E + +GEPI+
Sbjct: 123 MRAPVIFCSTSHSINVQKIFKIILSKAFDLKLNIEEIVNVGEPIL 167
>gi|238879215|gb|EEQ42853.1| septum-promoting GTP-binding protein 1 [Candida albicans WO-1]
Length = 170
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 102/165 (61%)
Query: 102 KYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILF 161
KYV ++ G+N MDK + +R I++SIW++ G + + LP+ D++AILF
Sbjct: 3 KYVEGSFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGGQKEFINMLPLVSNDAVAILF 62
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLT + TL S+ WY+Q R N+TAIP ++GTK+D FI L Q I QA+ + A
Sbjct: 63 MFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDLSFQDQIEITQQAKKFGSA 122
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ A + F S +++INV KI K I +K FD+ L+ + +GEPI+
Sbjct: 123 MKAPVIFCSTSHSINVQKIFKIILSKAFDLKLNLDEIVNVGEPIL 167
>gi|401882786|gb|EJT47030.1| small monomeric GTPase [Trichosporon asahii var. asahii CBS 2479]
Length = 196
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 107/183 (58%), Gaps = 12/183 (6%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + LK+ ++GD IGKTS + KYV ++ G+N M+K + +R I++SIW++
Sbjct: 26 NAIVLKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAITIRNTEITFSIWDL 85
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + LP+ D++AILFMFDLT + TL SV WY+QAR N+TAIP++IGTK+D
Sbjct: 86 GGQREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKYDI 145
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F P + Q I QA+ +AKA++A L KI K + AK FD+ + L
Sbjct: 146 FASYPREEQEEITKQAKRFAKAMHAPL------------KIFKIVLAKAFDLKVRVTMQL 193
Query: 260 TIG 262
I
Sbjct: 194 DIN 196
>gi|255730243|ref|XP_002550046.1| septum-promoting GTP-binding protein 1 [Candida tropicalis
MYA-3404]
gi|240132003|gb|EER31561.1| septum-promoting GTP-binding protein 1 [Candida tropicalis
MYA-3404]
Length = 170
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 97/150 (64%)
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
G+N MDK + ++ I++SIW++ G + + LP+ D++AILFMFDLT + TL S+
Sbjct: 18 GVNFMDKKIQIKNTTITFSIWDLGGQKEFTNMLPIVSNDAVAILFMFDLTRKSTLNSIKE 77
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNIN 236
WY+Q R N+TAIP ++GTK+D FI L Q I QA+ + A+ A + F S +++IN
Sbjct: 78 WYRQVRGFNKTAIPFLVGTKYDQFIDLSFQDQIEITQQAKKFGTAMKAPVIFCSTSHSIN 137
Query: 237 VNKILKFITAKLFDIPWTLERNLTIGEPII 266
V KI K I +K FD+ L++ +GEPI+
Sbjct: 138 VQKIFKIILSKAFDLKLKLDQIENVGEPIL 167
>gi|190348198|gb|EDK40610.2| hypothetical protein PGUG_04708 [Meyerozyma guilliermondii ATCC
6260]
Length = 170
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 101/165 (61%)
Query: 102 KYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILF 161
KYV ++ G+N MDK + +R I++SIW++ G + + LP+ D++AILF
Sbjct: 3 KYVEGAFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGGQKEFINMLPLVSNDAVAILF 62
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLT + TL S+ WY+Q R N+TAIP ++GTK+D FI Q I QA+ + A
Sbjct: 63 MFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDQSQQDQVEITQQAKKFGSA 122
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ A + F S +++INV KI K + +K FD+ LE + IGEPI+
Sbjct: 123 MRAPVIFCSTSHSINVQKIFKIVLSKAFDLKLNLEEIVNIGEPIL 167
>gi|449016255|dbj|BAM79657.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 298
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 110/177 (62%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ LK+ ++GD GKTS + +Y ++ G+N +++++ +R I +S+W++ G
Sbjct: 111 LTLKVGMVGDAGCGKTSLMVRYCEGHFDEDYIMTLGVNFLERSVSLRHTDIVFSVWDLGG 170
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
++ + LP+ D+ A+LF+FDLT + TL S+ WYQQ R N TA+PI++G K+D FI
Sbjct: 171 QSEFRTMLPLVTSDAAAMLFIFDLTRKTTLISIRDWYQQVRLLNVTAVPILVGNKYDLFI 230
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
L D Q +I +AR YA+A++A L F SA++ + V ++ K + +LFD+ ER
Sbjct: 231 SLAADQQASIVRRARKYARAMHAPLVFCSASHCVQVQRVFKLVLVRLFDLQPAFERQ 287
>gi|146413565|ref|XP_001482753.1| hypothetical protein PGUG_04708 [Meyerozyma guilliermondii ATCC
6260]
Length = 170
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 100/165 (60%)
Query: 102 KYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILF 161
KYV ++ G+N MDK + +R I++SIW++ G + + LP+ D++AILF
Sbjct: 3 KYVEGAFDEDYIQTLGVNFMDKKIQIRNTTITFSIWDLGGQKEFINMLPLVSNDAVAILF 62
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLT + TL S+ WY+Q R N+TAIP ++GTK+D FI Q I QA+ + A
Sbjct: 63 MFDLTRKSTLNSIKEWYRQVRGFNKTAIPFLVGTKYDQFIDQSQQDQVEITQQAKKFGSA 122
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ A + F S ++ INV KI K + +K FD+ LE + IGEPI+
Sbjct: 123 MRAPVIFCSTSHLINVQKIFKIVLSKAFDLKLNLEEIVNIGEPIL 167
>gi|406700563|gb|EKD03729.1| small monomeric GTPase [Trichosporon asahii var. asahii CBS 8904]
Length = 191
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 95/147 (64%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + LK+ ++GD IGKTS + KYV ++ G+N M+K + +R I++SIW++
Sbjct: 26 NAIVLKVGMVGDAQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKAITIRNTEITFSIWDL 85
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + LP+ D++AILFMFDLT + TL SV WY+QAR N+TAIP++IGTK+D
Sbjct: 86 GGQREFVSMLPLVSNDAVAILFMFDLTRKSTLNSVKEWYRQARGFNKTAIPVLIGTKYDI 145
Query: 200 FIQLPIDLQWTIASQARAYAKALNATL 226
F P + Q I QA+ +AKA++A L
Sbjct: 146 FASYPREEQEEITKQAKRFAKAMHAPL 172
>gi|255714264|ref|XP_002553414.1| KLTH0D16236p [Lachancea thermotolerans]
gi|238934794|emb|CAR22976.1| KLTH0D16236p [Lachancea thermotolerans CBS 6340]
Length = 225
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 116/187 (62%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N LKI L+GD +GKTS + KYV + ++ + G+N + K + + A I + I ++
Sbjct: 17 NTFTLKIGLIGDAQVGKTSLMVKYVENVFDEEYTQTLGVNCLSKKITLGSADILFYIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A + + AI+F+FDLT TLKS+ W++QA N+ A+P+++GTK+D
Sbjct: 77 GGQREFINMLPLASEGAKAIIFLFDLTRPETLKSIKEWHRQATGFNEQAVPLLVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ L + Q I+ Q+ YA+A++A L F S +++INV KI K + AKL+++
Sbjct: 137 FVNLDPEYQAQISKQSMRYAQAMDAPLIFCSTSHSINVQKIFKIVIAKLYNLTMRASEIK 196
Query: 260 TIGEPII 266
IG+P++
Sbjct: 197 QIGDPLL 203
>gi|156842204|ref|XP_001644471.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM
70294]
gi|156115114|gb|EDO16613.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM
70294]
Length = 225
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 110/187 (58%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + ++I L+GD +GKTS + KYV + + G+N + + + VR I +SI ++
Sbjct: 11 NQIEVQIGLVGDAQVGKTSLMVKYVQNIFNDEYTQTLGVNFLKRKVSVRSTDIVFSILDL 70
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S AI+F+FDLT TL S+ WY+QA N AIPI++GTK+D
Sbjct: 71 GGQKEFINMLPIASIGSSAIIFLFDLTRPETLNSIKEWYRQANGLNDQAIPILVGTKYDL 130
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
FI L Q I+ A YA+ +NA L F+S +INV KI K +K+F++ T+
Sbjct: 131 FIDLDQSTQEKISRIAMQYAQVMNAPLIFTSTAKSINVQKIFKIALSKIFNLTLTISEIN 190
Query: 260 TIGEPII 266
IG+P++
Sbjct: 191 EIGDPLL 197
>gi|342881725|gb|EGU82557.1| hypothetical protein FOXB_06923 [Fusarium oxysporum Fo5176]
Length = 267
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 25/190 (13%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SI
Sbjct: 98 NGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSI 157
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK
Sbjct: 158 WDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTK 217
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D F+ P Q I+ N+I K + +K FD+ T+
Sbjct: 218 YDHFVNFPPQDQEEIS-------------------------NQIFKIVLSKAFDLKCTIP 252
Query: 257 RNLTIGEPII 266
+GEP++
Sbjct: 253 EIENVGEPLL 262
>gi|429861946|gb|ELA36609.1| septum-promoting gtp-binding protein 1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 277
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 25/187 (13%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 111 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 170
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 171 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 230
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ N+I K + +K FD+ T+
Sbjct: 231 FVNFPREDQEEIS-------------------------NQIFKIVLSKAFDLKCTIPEIE 265
Query: 260 TIGEPII 266
+GEP++
Sbjct: 266 NVGEPLL 272
>gi|302896418|ref|XP_003047089.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728017|gb|EEU41376.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 265
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 25/187 (13%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 99 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 158
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 159 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 218
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P Q I+ N+I K + +K FD+ T+
Sbjct: 219 FVNFPPQDQEEIS-------------------------NQIFKIVLSKAFDLKCTIPEIE 253
Query: 260 TIGEPII 266
+GEP++
Sbjct: 254 NVGEPLL 260
>gi|46130840|ref|XP_389151.1| hypothetical protein FG08975.1 [Gibberella zeae PH-1]
Length = 267
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 25/187 (13%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 101 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 160
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D
Sbjct: 161 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDH 220
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P Q I+ N+I K + +K FD+ T+
Sbjct: 221 FVNFPPQDQEEIS-------------------------NQIFKIVLSKAFDLKCTIPEIE 255
Query: 260 TIGEPII 266
+GEP++
Sbjct: 256 NVGEPLL 262
>gi|367012774|ref|XP_003680887.1| hypothetical protein TDEL_0D00920 [Torulaspora delbrueckii]
gi|359748547|emb|CCE91676.1| hypothetical protein TDEL_0D00920 [Torulaspora delbrueckii]
Length = 229
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 115/189 (60%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +S+
Sbjct: 13 AKNRVDVQVGLVGDAQVGKTSLMVKYVQNVFDEEYTQTLGVNFLKRKVSIRSTDIVFSLM 72
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+A S AI+F+FDLT TL S+ WY+QA N+TA+P+++GTK+
Sbjct: 73 DLGGQREFINMLPIASLGSSAIVFLFDLTRPETLSSIKEWYRQAHGLNETAVPLLVGTKY 132
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ L + Q ++ + YA+ ++A L F S +INV KI K AK+F + T++
Sbjct: 133 DLFVDLDPEYQEQLSRTSMEYAQVMDAPLIFCSTAKSINVQKIFKIALAKIFKLTLTVQE 192
Query: 258 NLTIGEPII 266
+G+P++
Sbjct: 193 INDVGDPLL 201
>gi|226294186|gb|EEH49606.1| septum-promoting GTP-binding protein [Paracoccidioides brasiliensis
Pb18]
Length = 328
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 25/189 (13%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 159 SKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 218
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+
Sbjct: 219 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKY 278
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ P + Q I+ Q I K + +K FD+ T+
Sbjct: 279 DHFVNFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPE 313
Query: 258 NLTIGEPII 266
IGEP++
Sbjct: 314 IENIGEPLL 322
>gi|296816190|ref|XP_002848432.1| septum-promoting GTP-binding protein 1 [Arthroderma otae CBS
113480]
gi|238841457|gb|EEQ31119.1| septum-promoting GTP-binding protein 1 [Arthroderma otae CBS
113480]
Length = 358
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 25/187 (13%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 192 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 251
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 252 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 311
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ Q I K + +K FD+ T+
Sbjct: 312 FVNFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIE 346
Query: 260 TIGEPII 266
IGEP++
Sbjct: 347 NIGEPLL 353
>gi|295664480|ref|XP_002792792.1| septum-promoting GTP-binding protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278906|gb|EEH34472.1| septum-promoting GTP-binding protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 328
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 25/189 (13%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 159 SKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 218
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+
Sbjct: 219 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKY 278
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ P + Q I+ Q I K + +K FD+ T+
Sbjct: 279 DHFVNFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPE 313
Query: 258 NLTIGEPII 266
IGEP++
Sbjct: 314 IENIGEPLL 322
>gi|225561620|gb|EEH09900.1| septum-promoting GTP-binding protein [Ajellomyces capsulatus
G186AR]
Length = 348
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 25/189 (13%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW
Sbjct: 179 SKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIW 238
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+
Sbjct: 239 DLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKY 298
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F+ P + Q I+ Q I K + +K FD+ T+
Sbjct: 299 DHFVNFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPE 333
Query: 258 NLTIGEPII 266
IGEP++
Sbjct: 334 IENIGEPLL 342
>gi|302662967|ref|XP_003023132.1| hypothetical protein TRV_02710 [Trichophyton verrucosum HKI 0517]
gi|291187113|gb|EFE42514.1| hypothetical protein TRV_02710 [Trichophyton verrucosum HKI 0517]
Length = 365
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 93/143 (65%), Gaps = 4/143 (2%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYV-GDEKEQG---GSPGEGLNMMDKTLLVRGARISYS 135
N V +K+ ++GD IGKTS + KYV GD+ + + G+N M+KT+ +R I++S
Sbjct: 213 NSVVIKVGMVGDAQIGKTSLMVKYVEGDKSREALITNTTEPGVNFMEKTISIRNTEITFS 272
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGT 195
IW++ G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GT
Sbjct: 273 IWDLGGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGT 332
Query: 196 KFDDFIQLPIDLQWTIASQARAY 218
K+D F+ P + Q I+ Q R +
Sbjct: 333 KYDHFVNFPREDQEEISIQVRPF 355
>gi|401842934|gb|EJT44931.1| TEM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 245
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISGTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>gi|261189809|ref|XP_002621315.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
SLH14081]
gi|239591551|gb|EEQ74132.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
SLH14081]
Length = 336
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 25/187 (13%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 169 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 228
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D
Sbjct: 229 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDH 288
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ Q I K + +K FD+ T+
Sbjct: 289 FVNFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIE 323
Query: 260 TIGEPII 266
IGEP++
Sbjct: 324 NIGEPLL 330
>gi|28396142|gb|AAO39054.1| Tem-1-like protein [Giardia intestinalis]
Length = 206
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI+LLG+ GKTS + +YV E G+N M++T+ + + SIW++ G++
Sbjct: 17 VKIALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFMERTITLHDNPVLLSIWDLGGES 76
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ ++ LP+ C S+ L++FDLTS+ +L S+ WY+QA+ N++A P+++G K+D F +L
Sbjct: 77 EFKNMLPLVCDGSMVFLYIFDLTSKTSLASIKEWYRQAKALNRSAFPVLVGAKYDRFREL 136
Query: 204 PIDLQWTIASQARAYAKAL-NATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
D + I AR Y+KA+ N L F+SA +N+N++ K + +F + +E+
Sbjct: 137 REDKKREIIEHARRYSKAMKNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIEADD 196
Query: 263 EPIIDF 268
+PI ++
Sbjct: 197 QPIFEY 202
>gi|401624465|gb|EJS42522.1| tem1p [Saccharomyces arboricola H-6]
Length = 245
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIVFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>gi|239612920|gb|EEQ89907.1| septum-promoting GTP-binding protein 1 [Ajellomyces dermatitidis
ER-3]
Length = 336
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 25/187 (13%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 169 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 228
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP +IGTK+D
Sbjct: 229 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLIGTKYDH 288
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I+ Q I K + +K FD+ T+
Sbjct: 289 FVNFPREDQEEISIQ-------------------------IFKIVLSKAFDLKCTIPEIE 323
Query: 260 TIGEPII 266
IGEP++
Sbjct: 324 NIGEPLL 330
>gi|159114236|ref|XP_001707343.1| Tem-1-like protein [Giardia lamblia ATCC 50803]
gi|157435447|gb|EDO79669.1| Tem-1-like protein [Giardia lamblia ATCC 50803]
gi|308161347|gb|EFO63799.1| Tem-1-like protein [Giardia lamblia P15]
Length = 196
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI+LLG+ GKTS + +YV E G+N M++T+ + + SIW++ G++
Sbjct: 7 VKIALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFMERTITLHDNPVLLSIWDLGGES 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ ++ LP+ C S+ L++FDLTS+ +L S+ WY+QA+ N++A P+++G K+D F +L
Sbjct: 67 EFKNMLPLVCDGSMVFLYIFDLTSKTSLASIKEWYRQAKALNRSAFPVLVGAKYDRFREL 126
Query: 204 PIDLQWTIASQARAYAKAL-NATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
D + I AR Y+KA+ N L F+SA +N+N++ K + +F + +E+
Sbjct: 127 REDKKREIIEHARRYSKAMKNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIEADD 186
Query: 263 EPIIDF 268
+PI ++
Sbjct: 187 QPIFEY 192
>gi|322695311|gb|EFY87121.1| putative septum initiation protein sid3 [Metarhizium acridum CQMa
102]
Length = 256
Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 4/178 (2%)
Query: 39 YRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCH--SHRHLDADNLVALKISLLGDCHIGK 96
+R P V+ PS S SGL T S S+ + N V +K+ ++GD IGK
Sbjct: 58 HRYTP--PVSGPSHSRPASGLSNPTHQSHSDYRQGSNEPQNGRNHVVIKVGMVGDAQIGK 115
Query: 97 TSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDS 156
TS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D+
Sbjct: 116 TSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDA 175
Query: 157 IAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQ 214
+AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D F+ PI Q I++Q
Sbjct: 176 VAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPIQDQEEISNQ 233
>gi|365759134|gb|EHN00941.1| Tem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 245
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISGTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>gi|322712672|gb|EFZ04245.1| septum initiation protein sid3 [Metarhizium anisopliae ARSEF 23]
Length = 256
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 4/178 (2%)
Query: 39 YRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCH--SHRHLDADNLVALKISLLGDCHIGK 96
+R P V+ PS S SGL T S S+ + N V +K+ ++GD IGK
Sbjct: 58 HRYTP--PVSGPSHSRPASGLSNPTHQTHSDYRQGSNEPPNGRNHVVIKVGMVGDAQIGK 115
Query: 97 TSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDS 156
TS + KYV ++ G+N M+KT+ +R I++SIW++ G + + LP+ C D+
Sbjct: 116 TSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLPLVCNDA 175
Query: 157 IAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQ 214
+AILFMFDLT + TL S+ WY+Q R N+TAIPI++GTK+D F+ PI Q I++Q
Sbjct: 176 VAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPILVGTKYDHFVNFPIQDQEEISNQ 233
>gi|366999086|ref|XP_003684279.1| hypothetical protein TPHA_0B01720 [Tetrapisispora phaffii CBS 4417]
gi|357522575|emb|CCE61845.1| hypothetical protein TPHA_0B01720 [Tetrapisispora phaffii CBS 4417]
Length = 296
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 115/189 (60%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + + + G+N + +T+ VR I +S+ ++
Sbjct: 24 NQVEIQVGLIGDAQVGKTSLMVKYVQNIFNEEYTQTLGVNFLKRTVSVRSTDIVFSLLDL 83
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S AI+F+FDLT TL S+ WY+QA N+ AIPI++GTK+D
Sbjct: 84 GGQKEFINMLPIATVGSAAIVFLFDLTRPETLNSIKNWYRQANGLNEMAIPILVGTKYDL 143
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
FI L + Q +I+ + A+ +++ L F S + +INV KI K +K+F++ T+
Sbjct: 144 FINLDKEHQDSISRLSMEIAQVMDSPLVFCSTSKSINVQKIFKIALSKIFNLTLTIPEIN 203
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 204 EIGDPLLIY 212
>gi|256269741|gb|EEU05008.1| Tem1p [Saccharomyces cerevisiae JAY291]
Length = 245
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>gi|6323576|ref|NP_013647.1| Tem1p [Saccharomyces cerevisiae S288c]
gi|730928|sp|P38987.1|TEM1_YEAST RecName: Full=Protein TEM1
gi|537606|dbj|BAA07371.1| GTP-binding protein Tem1p [Saccharomyces cerevisiae]
gi|558411|emb|CAA86257.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269852|gb|AAS56306.1| YML064C [Saccharomyces cerevisiae]
gi|151946100|gb|EDN64331.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190408179|gb|EDV11444.1| protein TEM1 [Saccharomyces cerevisiae RM11-1a]
gi|259148512|emb|CAY81757.1| Tem1p [Saccharomyces cerevisiae EC1118]
gi|285813938|tpg|DAA09833.1| TPA: Tem1p [Saccharomyces cerevisiae S288c]
gi|323303640|gb|EGA57428.1| Tem1p [Saccharomyces cerevisiae FostersB]
gi|323307816|gb|EGA61078.1| Tem1p [Saccharomyces cerevisiae FostersO]
gi|323352962|gb|EGA85262.1| Tem1p [Saccharomyces cerevisiae VL3]
gi|349580224|dbj|GAA25384.1| K7_Tem1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763689|gb|EHN05215.1| Tem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297519|gb|EIW08619.1| Tem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 245
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>gi|366997510|ref|XP_003678517.1| hypothetical protein NCAS_0J02000 [Naumovozyma castellii CBS 4309]
gi|342304389|emb|CCC72179.1| hypothetical protein NCAS_0J02000 [Naumovozyma castellii CBS 4309]
Length = 223
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 114/185 (61%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ +++ L+GD +GKTS + KY + ++ + G+N++ + + ++ + I +S+ ++ G
Sbjct: 23 IQIQVGLVGDAQVGKTSLMVKYAQNGFDEEYTQTLGVNLLKRKVRIKSSNIVFSLMDLGG 82
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+A +S I+F+FDLT +L+S+ WY QA N A+ I++GTK+D FI
Sbjct: 83 QKEFINMLPIASVNSSVIIFLFDLTRPESLESIKNWYMQAHGLNHDAVCILVGTKYDLFI 142
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
LP + Q I+ + YA+A+++ L FSS+ +IN+ KI K AK+FD+ + I
Sbjct: 143 DLPTEYQEQISRTSMKYAQAMDSPLIFSSSIASINIQKIFKIALAKVFDLTLIIPEITQI 202
Query: 262 GEPII 266
G+P++
Sbjct: 203 GDPLL 207
>gi|253745133|gb|EET01237.1| Tem-1-like protein [Giardia intestinalis ATCC 50581]
Length = 197
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 113/186 (60%), Gaps = 1/186 (0%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI+LLG+ GKTS + +YV E G+N M++T+ + + SIW++ G++
Sbjct: 7 VKIALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFMERTITLHDNPVLLSIWDLGGES 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ ++ LP+ C S+ L++FDLTS+ +L S+ WY+QA+ N++A P+++G K+D F +L
Sbjct: 67 EFKNMLPLVCDGSMVFLYIFDLTSKTSLASIKEWYRQAKALNRSAFPVLVGAKYDRFREL 126
Query: 204 PIDLQWTIASQARAYAKAL-NATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
D + I AR Y+KA+ N L F+SA +N+N++ K + +F + +E+
Sbjct: 127 REDKRKEIIEHARRYSKAMKNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIDADD 186
Query: 263 EPIIDF 268
+PI ++
Sbjct: 187 QPIFEY 192
>gi|323336176|gb|EGA77447.1| Tem1p [Saccharomyces cerevisiae Vin13]
gi|323347072|gb|EGA81347.1| Tem1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 245
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLXSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>gi|207342544|gb|EDZ70280.1| YML064Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 245
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLGSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>gi|50293691|ref|XP_449257.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528570|emb|CAG62231.1| unnamed protein product [Candida glabrata]
Length = 254
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +S+ ++
Sbjct: 25 NQVDIQVGLIGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVSIRSTDIVFSLMDL 84
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+ +FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 85 GGQREFINMLPIATLGSSVIILLFDLTRPETLNSIKEWYRQALGLNDSAIPILVGTKYDL 144
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
FI L + Q ++ + YA+ ++A L F S +IN+ KI K AK+FD+ T+
Sbjct: 145 FIDLEEEYQEKVSKTSMKYAQVMDAPLIFCSTAKSINIQKIFKVALAKIFDLTLTIPEIN 204
Query: 260 TIGEPII 266
IG+P++
Sbjct: 205 EIGDPLL 211
>gi|365986058|ref|XP_003669861.1| hypothetical protein NDAI_0D03040 [Naumovozyma dairenensis CBS 421]
gi|343768630|emb|CCD24618.1| hypothetical protein NDAI_0D03040 [Naumovozyma dairenensis CBS 421]
Length = 214
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 110/187 (58%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V L++ L+GD +GKTS + KYV + ++ + G+N + + + + I YS+ ++
Sbjct: 17 NQVDLQVGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNYLKRKVRLHSTDIIYSLMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S AI+F+FDLT TL S+ WY+Q N AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIAAVGSSAIIFLFDLTRPETLNSIKDWYRQVNGLNDVAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
FI L + Q I++ A Y+K +N+ L F S IN+ KI K AK+F++ +
Sbjct: 137 FIGLDSNYQNHISNSAIEYSKIMNSPLVFCSTAEGINIQKIFKIALAKIFNLTLVIPEIT 196
Query: 260 TIGEPII 266
T+G+P++
Sbjct: 197 TVGDPLL 203
>gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 10895]
gi|44983716|gb|AAS52815.1| AER132Wp [Ashbya gossypii ATCC 10895]
gi|374108214|gb|AEY97121.1| FAER132Wp [Ashbya gossypii FDAG1]
Length = 232
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 114/189 (60%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +KI L+GD +GKTS + KYV + ++ + G++ +++ + + + +SI ++
Sbjct: 12 NEVKIKIGLIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYLERKINLGSTDVIFSIMDL 71
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ ++AI+F+FDLT TL S+ WY+QAR N+TAIP+++GTK+D
Sbjct: 72 GGQREFINMLPLVSNRAVAIIFLFDLTRPETLTSIREWYRQARGFNETAIPLLVGTKYDL 131
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ L + Q ++ + YA+ + A L F S +INV KI K I AK F++ +
Sbjct: 132 FVNLDVAYQEELSKTSMRYAQVMGAPLVFCSTASSINVQKIFKVIIAKAFNLTLRIPEIK 191
Query: 260 TIGEPIIDF 268
+G+P++ +
Sbjct: 192 DMGDPLLIY 200
>gi|50303633|ref|XP_451758.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640890|emb|CAH02151.1| KLLA0B05038p [Kluyveromyces lactis]
Length = 223
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 116/200 (58%), Gaps = 9/200 (4%)
Query: 67 PSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
PSL H V +K+ L+GD +GKTS + KYV + ++ + G++ +++ ++
Sbjct: 9 PSLRHQ---------VKVKVGLIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYLERKVV 59
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ 186
+ + +SI ++ G + + LP+ + ++AI+F+FDLT TL S+ WY+QAR N
Sbjct: 60 LGSTDVIFSIMDLGGQREFINMLPLVSEGAVAIVFLFDLTRPETLNSIKEWYRQARGFND 119
Query: 187 TAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
TAI I++GTK+D F+ + + Q ++ A YA+ + + L F S +INV KI K + A
Sbjct: 120 TAISILVGTKYDLFVDMDPEYQENVSRTAMKYAQVMKSPLIFCSTQSSINVQKIFKVVIA 179
Query: 247 KLFDIPWTLERNLTIGEPII 266
K F++ + IGEP++
Sbjct: 180 KAFNLTLKVPEYKQIGEPLL 199
>gi|410082754|ref|XP_003958955.1| hypothetical protein KAFR_0I00390 [Kazachstania africana CBS 2517]
gi|372465545|emb|CCF59820.1| hypothetical protein KAFR_0I00390 [Kazachstania africana CBS 2517]
Length = 231
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 111/187 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +S+ ++
Sbjct: 18 NQVDIQVGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVNLRSTDIVFSLMDL 77
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S AI+F+FDLT TL+SV WY+QA N AIPI++GTK+D
Sbjct: 78 GGQREFINMLPLAAVGSAAIIFLFDLTRPETLESVKEWYRQAYGLNNQAIPILVGTKYDL 137
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
FI L + Q ++ A Y++ ++A L F S +IN+ KI K AK+F + T+
Sbjct: 138 FIDLDEEYQRQVSKTALDYSEVMDAPLVFCSTAKSINIQKIFKIALAKIFSLTLTISEIK 197
Query: 260 TIGEPII 266
G+PI+
Sbjct: 198 DTGDPIL 204
>gi|363748010|ref|XP_003644223.1| hypothetical protein Ecym_1155 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887855|gb|AET37406.1| hypothetical protein Ecym_1155 [Eremothecium cymbalariae
DBVPG#7215]
Length = 233
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 114/190 (60%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+N V +KI L+GD +GKTS + KYV + ++ + G++ +++ + + + +SI +
Sbjct: 11 NNEVKIKIGLIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYLERKINLGSTDVIFSIMD 70
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
+ G + + LP+ ++AI+F+FDLT TL S+ WY+QAR N+TAIP+++GTK+D
Sbjct: 71 LGGQREFINMLPLVSNRAVAIIFLFDLTRPETLTSIREWYRQARGFNETAIPLLVGTKYD 130
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ L + Q ++ + YA+ + A L F S +INV KI K + AK F++ +
Sbjct: 131 LLVNLDVAYQEEVSKTSMRYAQVMGAPLIFCSTASSINVQKIFKVVIAKAFNLTLRIPEI 190
Query: 259 LTIGEPIIDF 268
IG+P++ +
Sbjct: 191 KDIGDPLLIY 200
>gi|254579148|ref|XP_002495560.1| ZYRO0B14256p [Zygosaccharomyces rouxii]
gi|238938450|emb|CAR26627.1| ZYRO0B14256p [Zygosaccharomyces rouxii]
Length = 227
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 113/192 (58%)
Query: 75 HLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISY 134
++ N V ++I L+GD +GKTS + KYV + ++ + G+N + + + +R I +
Sbjct: 21 NVKVKNQVEVQIGLVGDAQVGKTSLMVKYVQNVFDEEYTQTLGVNFLKRKVSIRSTDIIF 80
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIG 194
SI ++ G + + LP+A S A++F+FDLT TL S+ WY+QA N+ AIP+++G
Sbjct: 81 SIMDLGGQREFINMLPIASLGSSALVFLFDLTRPETLTSIKEWYRQAHGLNEGAIPVLVG 140
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
TK+D F+ L Q ++ + YA+ ++A L F S +INV KI K AK+F + T
Sbjct: 141 TKYDLFVDLDPVYQEQLSRASMEYAQVMDAPLIFCSTAKSINVQKIFKVALAKIFSLTLT 200
Query: 255 LERNLTIGEPII 266
+ IG+P++
Sbjct: 201 VPEINEIGDPLL 212
>gi|238036883|dbj|BAH60832.1| mutant TEM1like protein [Candida glabrata]
Length = 254
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +S+ ++
Sbjct: 25 NQVDIQVGLIGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVSIRSTDIVFSLMDL 84
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+ +FDLT TL S+ WY+QA N +AIPI++GTK++
Sbjct: 85 GGQREFINMLPIATLGSSVIILLFDLTRPETLNSIKEWYRQALGLNDSAIPILVGTKYNL 144
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
FI L + Q ++ + YA+ ++A L F S +IN+ KI K AK+FD+ T+
Sbjct: 145 FIDLEEEYQEKVSKTSMKYAQVMDAPLIFCSTAKSINIQKIFKVALAKIFDLTLTIPEIN 204
Query: 260 TIGEPII 266
IG+P++
Sbjct: 205 EIGDPLL 211
>gi|366987563|ref|XP_003673548.1| hypothetical protein NCAS_0A06070 [Naumovozyma castellii CBS 4309]
gi|342299411|emb|CCC67165.1| hypothetical protein NCAS_0A06070 [Naumovozyma castellii CBS 4309]
Length = 225
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 109/190 (57%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D N V L+I L+GD +GKTS + KYV + ++ + G+N + + + + I +S+
Sbjct: 14 DVRNQVDLQIGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVKLHSTDIVFSL 73
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
++ G + + LP+A S I+F+FDLT TL S+ WY+Q + N AIPI++GTK
Sbjct: 74 MDLGGQKEFINMLPIAAVGSSVIVFLFDLTRPETLNSIKDWYRQVKGLNDIAIPILVGTK 133
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+D I L + Q I++ A YA ++A L F S +INV KI K AK+F++ +
Sbjct: 134 YDLLINLSAEYQEQISTAAIDYANVMDAPLIFCSTAESINVQKIFKIALAKIFNLTLVVP 193
Query: 257 RNLTIGEPII 266
IG+P++
Sbjct: 194 EIRDIGDPLL 203
>gi|258566980|ref|XP_002584234.1| septum-promoting GTP-binding protein 1 [Uncinocarpus reesii 1704]
gi|237905680|gb|EEP80081.1| septum-promoting GTP-binding protein 1 [Uncinocarpus reesii 1704]
Length = 305
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 89/135 (65%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 139 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 198
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP+++GTK+D
Sbjct: 199 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPLLVGTKYDH 258
Query: 200 FIQLPIDLQWTIASQ 214
F+ P + Q I+ Q
Sbjct: 259 FVNFPREDQEEISIQ 273
>gi|406602701|emb|CCH45749.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 175
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 102/165 (61%)
Query: 102 KYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILF 161
KY + + G+N M+K + + I ++IW++ GD + LP+ ++AI+F
Sbjct: 3 KYTNNTFDSNYKKTLGVNFMEKQIELNSTDIKFTIWDLGGDLEFSKMLPLTTDGAVAIIF 62
Query: 162 MFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKA 221
MFDLT + +L ++ WY+Q R N+TAIP+++GTK+D F+++ + Q + Q+ Y+KA
Sbjct: 63 MFDLTKKQSLINLKEWYKQVRLQNKTAIPLLVGTKYDLFLEMSEEYQKKLTIQSFKYSKA 122
Query: 222 LNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPII 266
+ ++L F+S++ +IN+ K+ K + +K FD+ L IGEPI+
Sbjct: 123 MKSSLIFTSSSDSINIQKVFKILMSKSFDLQLNLPELKNIGEPIL 167
>gi|403216154|emb|CCK70652.1| hypothetical protein KNAG_0E03990 [Kazachstania naganishii CBS
8797]
Length = 234
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 112/187 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 16 NQIDVQVGLVGDAQVGKTSLMVKYVQNIFDEEYTQTLGVNFLKRKVNLRSTDIIFSIMDL 75
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+FMFDLT TL+S+ W++QA N +A+PI++GTK+D
Sbjct: 76 GGQKEFINMLPLAAVGSSVIIFMFDLTRPKTLQSIKDWFRQAHGLNDSAVPILVGTKYDL 135
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I+ + I+ A YA+ +NA + F S +I++ KI K AK+F++ T+
Sbjct: 136 SIETDERVPGNISCTAMRYAQVMNAPIVFCSTAKSIHIQKIFKIALAKIFNLTLTVPEIE 195
Query: 260 TIGEPII 266
+IG+P++
Sbjct: 196 SIGDPLL 202
>gi|169614393|ref|XP_001800613.1| hypothetical protein SNOG_10337 [Phaeosphaeria nodorum SN15]
gi|160707337|gb|EAT82672.2| hypothetical protein SNOG_10337 [Phaeosphaeria nodorum SN15]
Length = 360
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 38/185 (20%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++ G
Sbjct: 209 VVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDLGG 268
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GT
Sbjct: 269 QREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGT------ 322
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
NINV KI K + +K FD+ T+ I
Sbjct: 323 --------------------------------NINVQKIFKIVLSKAFDLKCTIPEIENI 350
Query: 262 GEPII 266
GEP++
Sbjct: 351 GEPLL 355
>gi|14275892|dbj|BAB58892.1| Tem1-like protein [Giardia intestinalis]
Length = 177
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Query: 97 TSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDS 156
TS + +YV E G+N M++T+ + + SIW++ G+++ ++ LP+ C S
Sbjct: 1 TSLMVRYVEGEFNHNYIQSLGVNFMERTITLHDNPVLLSIWDLGGESEFKNMLPLVCDGS 60
Query: 157 IAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQAR 216
+ L++FDLTS+ +L S+ WY+QA+ N++A P+++G K+D F +L D + I AR
Sbjct: 61 MVFLYIFDLTSKTSLASIKEWYRQAKALNRSAFPVLVGAKYDRFRELREDKKREIIEHAR 120
Query: 217 AYAKAL-NATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEPIIDF 268
Y+KA+ N L F+SA +N+N++ K + +F + +E+ +PI ++
Sbjct: 121 RYSKAMKNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIEADDQPIFEY 173
>gi|67484658|ref|XP_657549.1| cell cycle-associated GTPase [Entamoeba histolytica HM-1:IMSS]
gi|167381212|ref|XP_001735623.1| septum-promoting GTP-binding protein [Entamoeba dispar SAW760]
gi|56474815|gb|EAL52171.1| cell cycle-associated GTPase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902316|gb|EDR28173.1| septum-promoting GTP-binding protein, putative [Entamoeba dispar
SAW760]
gi|407043068|gb|EKE41717.1| cell cycle-associated GTPase, putative [Entamoeba nuttalli P19]
gi|449704011|gb|EMD44340.1| septum promoting GTP-binding protein, putative [Entamoeba
histolytica KU27]
Length = 189
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 104/179 (58%), Gaps = 4/179 (2%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ LKI+++GD +GKTS + KYV ++ G+N M+KT+ ++G +++S+W++ G
Sbjct: 4 IKLKIAMVGDAGVGKTSLMVKYVEGNFDEDYIQTLGVNCMEKTISLKGKEVTFSVWDLGG 63
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
+ LP+ + ILF FDLT TL ++ WY++AR N +A I++GTK+D F
Sbjct: 64 QREYITMLPMVMDGARVILFFFDLTRVMTLNNIKDWYKEARAHNNSASCILVGTKYDLFA 123
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF----DIPWTLE 256
L + I + A YA+A+ A+ F S++ IN+ + K AK+F ++P T E
Sbjct: 124 DLDATEKSRITATALKYAQAMKASCVFCSSSQGINIQNVFKVSLAKVFGLTLNVPQTTE 182
>gi|302497239|ref|XP_003010620.1| hypothetical protein ARB_03321 [Arthroderma benhamiae CBS 112371]
gi|291174163|gb|EFE29980.1| hypothetical protein ARB_03321 [Arthroderma benhamiae CBS 112371]
Length = 350
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 14/139 (10%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV EG D ++ I++SIW++
Sbjct: 216 NSVVIKVGMVGDAQIGKTSLMVKYV-----------EGSWDED---YIQTLEITFSIWDL 261
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAIP ++GTK+D
Sbjct: 262 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAIPFLVGTKYDH 321
Query: 200 FIQLPIDLQWTIASQARAY 218
F+ P + Q I+ Q R +
Sbjct: 322 FVNFPREDQEEISIQVRPF 340
>gi|123390419|ref|XP_001299882.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121880822|gb|EAX86952.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 192
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 107/188 (56%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
++ + +KI+L+G +GKT+ + KY + G+ +++ + V+ ++ IW+
Sbjct: 3 ESAITVKIALIGSSMVGKTTLMVKYCKGTFSEDYIATLGVQFLERQITVKNTPVNIVIWD 62
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
+ G D LPV C + ++FMFDL++ +L ++ WY+ A CN +A ++G KFD
Sbjct: 63 IGGQKSFMDMLPVCCDGAHVLIFMFDLSNITSLTALRDWYKSAYDCNPSARVFLVGNKFD 122
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + + I ++A+ +A+A+ A L + S T++INV K+ + I A++F + +E+
Sbjct: 123 LYFEQTEEEKIAITNKAKKFAQAIGAPLMYCSNTHSINVKKLFQLIIAQVFGLDPRIEQC 182
Query: 259 LTIGEPII 266
EPI+
Sbjct: 183 SDPNEPIV 190
>gi|384485670|gb|EIE77850.1| hypothetical protein RO3G_02554 [Rhizopus delemar RA 99-880]
Length = 161
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 82/136 (60%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+N V LKI ++GD IGKTS + KY + G+N M+K++ +R I++SIW+
Sbjct: 22 NNNVILKIGIVGDAQIGKTSLMIKYAEGAYDPEYVQTLGVNFMEKSISIRQTEITFSIWD 81
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
+ G + LP C D++AILF FDL+ +L ++ W++Q R TA+P+++GTK+D
Sbjct: 82 LGGQKQFASMLPFVCNDAVAILFTFDLSKLSSLNNLREWHRQVRGITMTAVPLLVGTKYD 141
Query: 199 DFIQLPIDLQWTIASQ 214
+F+ L + Q + Q
Sbjct: 142 EFVDLSFEHQQEMTRQ 157
>gi|67542085|ref|XP_664810.1| hypothetical protein AN7206.2 [Aspergillus nidulans FGSC A4]
gi|40742268|gb|EAA61458.1| hypothetical protein AN7206.2 [Aspergillus nidulans FGSC A4]
Length = 268
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 72/110 (65%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 123 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 182
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI 189
G + + LP+ C D++AILFMFDLT + TL S+ WY+Q R N+TAI
Sbjct: 183 GGQREFVNMLPLVCNDAVAILFMFDLTRKSTLNSIKEWYRQGRGFNKTAI 232
>gi|325182079|emb|CCA16532.1| septumpromoting GTPbinding protein 1 putative [Albugo laibachii
Nc14]
Length = 138
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 64/100 (64%)
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
G+N M+KT+ +R I++SIW++ G + LP+ C D++AILFMFDL+ + TL S+
Sbjct: 36 GVNFMEKTIALRNTEITFSIWDLGGHREFISMLPLVCNDAVAILFMFDLSRKATLTSIKE 95
Query: 177 WYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQAR 216
WY+Q R N+ A P ++G K+D F + ++ Q I Q R
Sbjct: 96 WYRQVRSINKNAFPFLVGMKYDVFSKFNVEEQEDITKQVR 135
>gi|323332257|gb|EGA73667.1| Tem1p [Saccharomyces cerevisiae AWRI796]
Length = 172
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 77/129 (59%)
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
++ G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+
Sbjct: 2 DLGGQREFINMLPIATVGSSVIIFLFDLTRPETLGSIKEWYRQAYGLNDSAIPILVGTKY 61
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 62 DLLIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPE 121
Query: 258 NLTIGEPII 266
IG+P++
Sbjct: 122 INEIGDPLL 130
>gi|440291385|gb|ELP84654.1| septum-promoting GTP-binding protein, putative [Entamoeba invadens
IP1]
Length = 189
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI++LGD +GKTS + KYV + + G+ M+K + +RG I++SI ++ G
Sbjct: 7 IKIAMLGDSEVGKTSLMVKYVEGKFNEDYIMTLGIAFMEKKINLRGHEITFSIGDLGGQR 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ LP + +L FDLT +L +V WY+ R+ N TA I++GTK+D F+ L
Sbjct: 67 EYLTMLPNVLDGAHIVLLFFDLTRSVSLNNVKYWYKNTRQYNPTASIILVGTKYDLFVDL 126
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ I A +A + + F SA INV+ I K +K + + +++
Sbjct: 127 DEAERNKIVETALKFANLMKSACVFCSALLGINVDTIFKISLSKAYGLKLNIQQ 180
>gi|167539982|ref|XP_001741487.1| rab5 [Entamoeba dispar SAW760]
gi|165893902|gb|EDR22017.1| rab5, putative [Entamoeba dispar SAW760]
Length = 195
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N KI LLGD +GK+S + + DE ++ G + KTL+V G I + IW+
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDT 64
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + P+ + S A L ++D+TS + +W + R AI ++G K D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVYDITSDSSFTQAKKWIDELRGSGNEAIIFLVGNKCD- 123
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + +A YA++L+ +SA NINVN++ I KL
Sbjct: 124 ----LADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|407044250|gb|EKE42471.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 195
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N KI LLGD +GK+S + + DE ++ G + KTL+V G I + IW+
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGDTIKFEIWDT 64
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + P+ + S A L ++D+TS + +W + R A+ ++G K D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNEAVIFLVGNKCD- 123
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + +A YA++L+ +SA NINVN++ I KL
Sbjct: 124 ----LADSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|67480015|ref|XP_655377.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537437|dbj|BAB40673.1| small GTPase Rab5 [Entamoeba histolytica]
gi|56472508|gb|EAL49990.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 195
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N KI LLGD +GK+S + + DE ++ G + KTL+V G I + IW+
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKDEYKEFQENTIGAAFLTKTLIVDGETIKFEIWDT 64
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + P+ + S A L ++D+TS + +W + R AI ++G K D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVYDITSDSSFIQAKKWIDELRGSGNEAIIFLVGNKCD- 123
Query: 200 FIQLPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D I +A YA++L+ +SA NINVN++ I KL
Sbjct: 124 -----LDNSRVITKEEAEGYARSLSIDYIETSAKANINVNELFDQIARKL 168
>gi|125551885|gb|EAY97594.1| hypothetical protein OsI_19520 [Oryza sativa Indica Group]
Length = 210
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V+ K+ LLGD +GKTS + +YV D + + K L+V G I+ SIW+ G
Sbjct: 11 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAG 70
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
K P+ +D+ A L ++D+T T V +W ++ ++ I + I D +
Sbjct: 71 QEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDLV 130
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
+ + ++A +YA+++ ATLF +SA ++ I I +L + L++
Sbjct: 131 R----SKHIDTNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLEKRKNSSDGLSL 186
Query: 262 GEP 264
P
Sbjct: 187 AHP 189
>gi|156064083|ref|XP_001597963.1| hypothetical protein SS1G_00049 [Sclerotinia sclerotiorum 1980]
gi|154690911|gb|EDN90649.1| hypothetical protein SS1G_00049 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 252
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 120 NSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 179
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSR 168
G + + LP+ C D++AILFMFDLT +
Sbjct: 180 GGQREFVNMLPLVCNDAVAILFMFDLTRK 208
>gi|115463295|ref|NP_001055247.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|54291745|gb|AAV32114.1| unknown protein [Oryza sativa Japonica Group]
gi|113578798|dbj|BAF17161.1| Os05g0341600 [Oryza sativa Japonica Group]
gi|215767010|dbj|BAG99238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631179|gb|EEE63311.1| hypothetical protein OsJ_18122 [Oryza sativa Japonica Group]
Length = 212
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V+ K+ LLGD +GKTS + +YV D + + K L+V G I+ SIW+ G
Sbjct: 13 VSFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAG 72
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
K P+ +D+ A L ++D+T T V +W ++ ++ I + I D +
Sbjct: 73 QEKFHALGPIYYRDADAALLVYDITDNDTFLRVTKWVKELKQMANKDIVMAIAANKSDLV 132
Query: 202 QLP-IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ ID ++A +YA+++ ATLF +SA ++ I I +L + L+
Sbjct: 133 RSKHID-----TNEAASYAESIGATLFVTSAKAGTGIDDIFSDIAKRLLERRKNSSDGLS 187
Query: 261 IGEP 264
+ P
Sbjct: 188 LAHP 191
>gi|440294791|gb|ELP87736.1| GTP-binding protein YPT1, putative [Entamoeba invadens IP1]
Length = 200
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+ I+L GD +GKT F +++ + E+ S G ++ K L++ G + +W+ G
Sbjct: 2 ISIALSGDAFVGKTCFFKRFSVGQFEENTSSSIGCDVTCKKLILEGKSYNVQLWDTAGQE 61
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP---IIIGTKFDDF 200
+ ++ +LFMFDLTS TL V W + + N P ++IGTK D
Sbjct: 62 IFRSTTATYFRNRSCVLFMFDLTSSETLSHVEDWLKTFYEINNENTPTLLVLIGTKCDLV 121
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + QA+ +AK + F S+ NIN++ I+ F+ L + P ++
Sbjct: 122 AERVV-----TEDQAKEFAKTHSIPYFECSSRLNINIDTIIHFVLKNLRNPPQLQQQTKK 176
Query: 261 IGEPII 266
EP+I
Sbjct: 177 EEEPVI 182
>gi|300121531|emb|CBK22050.2| unnamed protein product [Blastocystis hominis]
Length = 298
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K LGD GKTS + +++ D + G++ + KT+L I +W+ G +
Sbjct: 70 KFVFLGDAGTGKTSIITRFIYDSFDPTYQSTIGIDFLSKTILYNNRPIRMQLWDTAGQER 129
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
Q +P +DS + ++D++SR + +V++W + R I +I+G K D
Sbjct: 130 FQSLIPSYIRDSSVAVIVYDISSRSSFDNVMKWVRDVRDQRDEVILVIVGNKTD-----L 184
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + + A+ NA F SSA N N++ + + + KL
Sbjct: 185 SDSRAVTIEEGQKLAEDNNAMFFESSAKCNYNIDTVFRKVVEKL 228
>gi|440493727|gb|ELQ76160.1| putative Ras small GTPase [Trachipleistophora hominis]
Length = 213
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L KI +LG+ ++GKTS +++V DE + G++++ KT+ V GA++ +IW+
Sbjct: 17 DLTTYKIIILGESYVGKTSIAQRFVNDEFDTSLFSTIGIDLLKKTVTVDGAKVRLNIWDT 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G + + + I+ +FDL + S+ RW++ + +PI ++G K+D
Sbjct: 77 AGQERFHSITKSYYRCADGIILVFDLLDLKSFDSIDRWFEGIHRETDENVPIFLVGNKYD 136
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
D + +D + + A+++N F +SA +N+
Sbjct: 137 D-AEHRVDFVLDVFEEK---ARSMNVEFFVTSAKTGLNI 171
>gi|145510424|ref|XP_001441145.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834242|emb|CAI44492.1| rab_C48 [Paramecium tetraurelia]
gi|124408384|emb|CAK73748.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ LLG +GK+S L ++V ++ ++ G P G KT+L+ G + + IW+ G
Sbjct: 7 IKVVLLGVSGVGKSSLLYRFVENDFQEKGQPTLGAAFQSKTILIDGKALKFQIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ-TAIPIIIGTKFDDFIQ 202
K + LP+ +D+ L ++D+ + + V W+QQ + I +IIG K
Sbjct: 67 KYKAILPLYYRDAKVALLVYDVNDLQSFEGVKEWFQQLQDQGPIDQIRVIIGNK------ 120
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
DL+ ++ A A+ NA F +S N+ V + I ++F
Sbjct: 121 --CDLEQNVSDNMAEELARQYNANFFKTSCKENLGVQETFIQIGERVF 166
>gi|325182080|emb|CCA16533.1| septumpromoting GTPbinding protein 1 putative [Albugo laibachii
Nc14]
Length = 114
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 149 LPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQ 208
LP+ C D++AILFMFDL+ + TL S+ WY+Q R N+ A P ++G K+D F + ++ Q
Sbjct: 44 LPLVCNDAVAILFMFDLSRKATLTSIKEWYRQVRSINKNAFPFLVGMKYDVFSKFNVEEQ 103
Query: 209 WTIASQAR 216
I Q R
Sbjct: 104 EDITKQVR 111
>gi|118375516|ref|XP_001020942.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89302709|gb|EAS00697.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777796|dbj|BAJ21294.1| Rab-family small GTPase Rab5B [Tetrahymena thermophila]
Length = 197
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ +LGD +GKTS L ++ ++ G + + K L + IW+ G
Sbjct: 7 IKVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASFIPKVLTRGDKTYKFQIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
K + P+ +D+ A L ++D+T+R + + +W Q+ R+ I I ++G K D
Sbjct: 67 KYRSLAPLYYRDTHAALIVYDITNRASFDVLKKWVQELREHGPANITIAVVGNKVD---- 122
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAK 247
ID + +A+ YA LNA ++SA N N+ + I K
Sbjct: 123 -LIDREDVKYDEAKQYANELNAIFQYTSAKENQNIESLFIQIAEK 166
>gi|156392797|ref|XP_001636234.1| predicted protein [Nematostella vectensis]
gi|156223335|gb|EDO44171.1| predicted protein [Nematostella vectensis]
Length = 178
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI ++GD GKTS L +Y + G++ KTL G RI IW+ G
Sbjct: 14 FKIVIVGDYKCGKTSLLYRYTDKIFNRSLHSTVGVDFRCKTLTRDGKRIKLQIWDTAGHE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + + +L ++D+TSR + SV WY Q C Q A +++G K L
Sbjct: 74 RFRTAVASYYRGATGVLLVYDITSRQSFCSVGHWYMQ-HNCEQEAKAVLVGNK----CHL 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ + ++A + R AK L F +SA NINV + + + +
Sbjct: 129 DCEREVSVA-EGRGLAKELGLPFFETSAEKNINVTDCFEALVDSILE 174
>gi|115612989|ref|XP_790094.2| PREDICTED: ras-related protein Rab-31-like [Strongylocentrotus
purpuratus]
Length = 195
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ LLGD +GK+S ++++V D + P G + M KTL V + IW+ G
Sbjct: 6 IKLCLLGDSGVGKSSIVQRFVSDTYYESIPPTIGASFMSKTLAVDEKMYKFQIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
K + P+ + + A + ++D+TS+ + V W ++ R+ I I I G K D D
Sbjct: 66 KYRGLAPMYYRGAAAAIVVYDITSQASFSKVRDWIRELRQHGPENIVISIAGNKCDLEDL 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ + A YA+ + A +SA N+ ++ I+ KL
Sbjct: 126 REIPVKI-------AAEYAEEVGAVFTETSAKTAANIKELFIAISKKL 166
>gi|291232375|ref|XP_002736136.1| PREDICTED: RAS-related protein RAB-22A-like [Saccoglossus
kowalevskii]
Length = 178
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ LLGD +GK+S ++++V D P G + M KTL+V + IW+ G
Sbjct: 6 IKLCLLGDSGVGKSSLVQRFVSDTFNTHSQPTIGASFMSKTLVVDDQSYKFQIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
K + P+ + + A + ++D+T + +V W ++ + + + I G K D
Sbjct: 66 KYRGLAPMYYRGAAAAIIVYDITRESSFSAVKMWVRELEQYGPGDVVLAIAGNKAD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
+D + +A YA +NAT +SA +NV ++ I
Sbjct: 122 -LVDQREVTYDEAHKYADQINATFVETSAKTAVNVTQLFTAI 162
>gi|149642869|ref|NP_001092635.1| ras-related protein Rab-22A [Bos taurus]
gi|148744911|gb|AAI42191.1| RAB22A protein [Bos taurus]
Length = 194
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++L I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAVFVETSAKNAININELLIEISRRI 166
>gi|238612177|ref|XP_002398151.1| hypothetical protein MPER_01301 [Moniliophthora perniciosa FA553]
gi|215474098|gb|EEB99081.1| hypothetical protein MPER_01301 [Moniliophthora perniciosa FA553]
Length = 100
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 190 PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
PI+IGTKFD F P D Q I QA+ +A+A++A+L F S + +INV KI K + AK F
Sbjct: 19 PILIGTKFDQFATFPRDEQEEITKQAKRFARAMHASLIFCSTSASINVQKIFKIVLAKAF 78
Query: 250 DIPWTLERNLTIGEPII 266
D+ + +GEPI+
Sbjct: 79 DLKCVIPEIEGVGEPIL 95
>gi|350645610|emb|CCD59735.1| rab-18, putative [Schistosoma mansoni]
Length = 204
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+ + + +K+ LLGD +GKTS + ++V D + G + ++V G I ++
Sbjct: 1 MAGEESIKIKLILLGDSGVGKTSLIRRFVDDRFIHNEAATIGFDFKPYQMVVDGRTIQFN 60
Query: 136 IWEVTGDAKAQDHL-PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIII 193
IW+ G + +L P + + LF++D+TS +L V W +Q R+ C + +++
Sbjct: 61 IWDTAGVERYSSYLTPSLYRHAHGALFVYDVTSVQSLSGVKYWVEQTRQFCGSRLLKMLV 120
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPW 253
G K D +D + + +A+++ + +SA + NV + K+ P
Sbjct: 121 GNKID------LDNRMVSKKEGSDFARSIGSIFVETSAKTSENVRDAFVELVRKILQDPE 174
Query: 254 TLERNLTIGEP 264
L T +P
Sbjct: 175 FLSSTTTTSQP 185
>gi|256087238|ref|XP_002579781.1| rab-18 [Schistosoma mansoni]
Length = 204
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+ + + +K+ LLGD +GKTS + ++V D + G + ++V G I ++
Sbjct: 1 MAGEESIKIKLILLGDSGVGKTSLIRRFVDDRFIHNEAATIGFDFKPYQMVVDGRTIQFN 60
Query: 136 IWEVTGDAKAQDHL-PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIII 193
IW+ G + +L P + + LF++D+TS +L V W +Q R+ C + +++
Sbjct: 61 IWDTAGVERYSSYLTPSLYRHAHGALFVYDVTSVQSLSGVKYWVEQTRQFCGSRLLKMLV 120
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPW 253
G K D +D + + +A+++ + +SA + NV + K+ P
Sbjct: 121 GNKID------LDNRMVSKKEGSDFARSIGSIFVETSAKTSENVRDAFVELVRKILQDPE 174
Query: 254 TLERNLTIGEP 264
L T +P
Sbjct: 175 FLSSTTTTSQP 185
>gi|320165409|gb|EFW42308.1| Rab31 protein [Capsaspora owczarzaki ATCC 30864]
Length = 201
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L +K+ LLGD +GK+S + ++V D + G + M KTL+V Y IW+
Sbjct: 5 SLREVKLCLLGDAGVGKSSLVLRFVADSFNENSESTIGASFMSKTLIVEDQTFKYQIWDT 64
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G K + P+ +++ A + ++++T + + +++ W ++ R+ + I + I G K D
Sbjct: 65 AGQEKYRGLAPMYYRNAAAAIIVYEITRKQSFEALKHWVKELRQFGPSNIILAIAGNKSD 124
Query: 199 DFIQLPIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ Q ++S +A+ YA +++A +SA NV+ + + ++ +L
Sbjct: 125 ------LESQRQVSSDEAKEYADSIDALFVETSALTADNVSYLFEALSKRL 169
>gi|167389639|ref|XP_001739030.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897453|gb|EDR24605.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ L+ KI LGD +GKT + +++ + G G + KT+ + I IW+
Sbjct: 2 NTLMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIWD 61
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF 197
G + + +P +DS A + ++D+ R + ++V +W + R + I + ++G K
Sbjct: 62 TAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNK- 120
Query: 198 DDFIQLPIDLQWTIASQARAYAKALN--ATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
+DL +Q A AK N T F +SA NIN+ ++ IT KL + +
Sbjct: 121 -------LDLGHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKLSTLEPPV 173
Query: 256 ERNL 259
E ++
Sbjct: 174 EEHI 177
>gi|145508972|ref|XP_001440430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834482|emb|CAI44559.1| rab_A51 [Paramecium tetraurelia]
gi|124407647|emb|CAK73033.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 76/138 (55%), Gaps = 12/138 (8%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ ++GKTS +E++V + + P G++ + K + + G + +W+ G +
Sbjct: 10 KLVFLGNSYVGKTSIIERFVSNTFDPKSQPTVGIDFIGKNITIDGKNMRLLLWDTAGQER 69
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC--NQTAIPIIIGTKFDDFIQ 202
+P +D+ + +FD+TSR + +S+ RW+ + ++ N+ AI +I+G K
Sbjct: 70 FHSLIPGYVRDAQCAIIVFDVTSRHSFESLDRWFNEVKQTRGNEAAI-VILGNK------ 122
Query: 203 LPIDLQWTIASQ-ARAYA 219
ID + I+SQ AR YA
Sbjct: 123 --IDAERVISSQEARDYA 138
>gi|183231256|ref|XP_655064.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169802558|gb|EAL49676.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 196
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ L+ KI LGD +GKT + +++ + G G + KT+ + I IW+
Sbjct: 2 NTLMKQKIVFLGDSSVGKTCIIGRFMNGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWD 61
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF 197
G + + +P +DS A + ++D+ R + +SV +W + R + I + ++G K
Sbjct: 62 TAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNK- 120
Query: 198 DDFIQLPIDLQWTIASQARAYAKALN--ATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
+DL +Q A AK N F +SA NIN+ ++ IT KL + +
Sbjct: 121 -------LDLGHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLSTLEPPV 173
Query: 256 ERNL 259
E ++
Sbjct: 174 EEHI 177
>gi|167389097|ref|XP_001738817.1| GTP-binding protein ryH1 [Entamoeba dispar SAW760]
gi|165897808|gb|EDR24880.1| GTP-binding protein ryH1, putative [Entamoeba dispar SAW760]
Length = 196
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ L+ KI LGD +GKT + +++ + G G + KT+ + I IW+
Sbjct: 2 NTLMKQKIVFLGDSSVGKTCIIGRFMTGDFSTGYEATIGTDFSTKTMTFQNKSIQLQIWD 61
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF 197
G + + +P +DS A + ++D+ R + ++V +W + R + I + ++G K
Sbjct: 62 TAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFENVDKWIEDVRSKEKGEIFLFLVGNK- 120
Query: 198 DDFIQLPIDLQWTIASQARAYAKALN--ATLFFSSATYNINVNKILKFITAKL 248
+DL +Q A AK N T F +SA NIN+ ++ IT KL
Sbjct: 121 -------LDLGHREVTQKEALAKGQNYQCTCFETSAKTNINITELFNAITEKL 166
>gi|426241217|ref|XP_004014488.1| PREDICTED: ras-related protein Rab-22A [Ovis aries]
gi|296481198|tpg|DAA23313.1| TPA: RAS-related protein RAB-22A [Bos taurus]
Length = 194
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAVFVETSAKNAININELFIEISRRI 166
>gi|348552524|ref|XP_003462077.1| PREDICTED: ras-related protein Rab-22A-like [Cavia porcellus]
Length = 194
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|178056610|ref|NP_001116646.1| ras-related protein Rab-22A [Sus scrofa]
gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family [Sus scrofa]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVLERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|417396853|gb|JAA45460.1| Putative gtpase [Desmodus rotundus]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|344296537|ref|XP_003419963.1| PREDICTED: ras-related protein Rab-22A-like [Loxodonta africana]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPDIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LIDVREVMERDAKDYADSIHAVFVETSAKNAININELFIEISRRI 166
>gi|302563975|ref|NP_001180746.1| ras-related protein Rab-22A [Macaca mulatta]
gi|297707438|ref|XP_002830512.1| PREDICTED: ras-related protein Rab-22A [Pongo abelii]
gi|397469142|ref|XP_003806222.1| PREDICTED: ras-related protein Rab-22A [Pan paniscus]
gi|402882151|ref|XP_003904614.1| PREDICTED: ras-related protein Rab-22A [Papio anubis]
gi|426392268|ref|XP_004062478.1| PREDICTED: ras-related protein Rab-22A [Gorilla gorilla gorilla]
gi|380788255|gb|AFE66003.1| ras-related protein Rab-22A [Macaca mulatta]
gi|383420237|gb|AFH33332.1| ras-related protein Rab-22A [Macaca mulatta]
gi|410220672|gb|JAA07555.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410260092|gb|JAA18012.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410298900|gb|JAA28050.1| RAB22A, member RAS oncogene family [Pan troglodytes]
gi|410335379|gb|JAA36636.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 194
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|397525605|ref|XP_003832751.1| PREDICTED: ras-related protein Rab-22A-like [Pan paniscus]
Length = 219
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 28 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 87
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 88 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 147
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 148 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 191
>gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncogene family [synthetic
construct]
gi|61370724|gb|AAX43543.1| RAB22A member RAS oncogene family [synthetic construct]
gi|61370733|gb|AAX43544.1| RAB22A member RAS oncogene family [synthetic construct]
Length = 195
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|50978970|ref|NP_001003208.1| ras-related protein Rab-22A [Canis lupus familiaris]
gi|3256092|emb|CAA80473.1| Rab22a protein [Canis lupus familiaris]
Length = 194
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|348668632|gb|EGZ08456.1| hypothetical protein PHYSODRAFT_565187 [Phytophthora sojae]
Length = 200
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 77 DADNLVA--LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISY 134
DA N A +K+ LLGD +GK+S + ++V + G + M K ++V I Y
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKY 62
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIG 194
IW+ G K P+ + + A + ++D+T + +L ++ W ++ ++ I I I
Sbjct: 63 QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIA 122
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + ASQARAYA+ + A +SA + NV+ + I+ L
Sbjct: 123 GNKSDLEE----KREVPASQARAYAEEIGALFIETSAKEDTNVSDLFIQISQAL 172
>gi|167385851|ref|XP_001737516.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899672|gb|EDR26216.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 713
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI ++GD +GKTS +++YV + + P G+++ +KT+ + G I S ++ G
Sbjct: 520 FKIIVIGDASVGKTSLVKRYVDRKFYKELKPTIGVDIKNKTININGENICLSFFDTAGQE 579
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
K K + A + ++D+T T SV +WY + R IP+ IIG K D
Sbjct: 580 KFAAVTDSYFKGAKACIIVYDITKAVTFNSVDKWYNKLRNIVSDPIPVLIIGNKLD---- 635
Query: 203 LPIDLQWTIASQARA-YAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
++ Q I + A A+ L A +S NV+K +K I+ ++ + + +NL++
Sbjct: 636 --VEQQRDITADVGASLARKLGAFFIETSCLNGSNVDKAIKIISNEISNNK--VVKNLSL 691
Query: 262 GEP 264
+P
Sbjct: 692 AQP 694
>gi|355714872|gb|AES05145.1| RAB22A, member RAS oncoprotein family [Mustela putorius furo]
Length = 193
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|326437703|gb|EGD83273.1| small GTP binding protein RAB6A [Salpingoeca sp. ATCC 50818]
Length = 207
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 10/183 (5%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 9 SLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 68
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD 198
G + + +P +DS + ++D+T+R + + RW R + Q I +++G K D
Sbjct: 69 AGQERFRSLIPSYIRDSSVAVVVYDITNRSSFQQTSRWIDDVRAERGQDVIIMLVGNKTD 128
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D Q+ ID + AK LN +SA NV ++ + + L + + E
Sbjct: 129 LADKRQVSID-------EGERRAKELNVMFIETSAKAGHNVKELFRRVAGALPGMEASAE 181
Query: 257 RNL 259
+NL
Sbjct: 182 KNL 184
>gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens]
Length = 194
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|395829258|ref|XP_003787777.1| PREDICTED: ras-related protein Rab-22A [Otolemur garnettii]
Length = 194
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|126302779|ref|XP_001368849.1| PREDICTED: ras-related protein Rab-22A-like [Monodelphis domestica]
gi|395506750|ref|XP_003757693.1| PREDICTED: ras-related protein Rab-22A [Sarcophilus harrisii]
Length = 194
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|10190714|ref|NP_065724.1| ras-related protein Rab-22A [Homo sapiens]
gi|13633614|sp|Q9UL26.2|RB22A_HUMAN RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
gi|9961232|gb|AAF00047.2|AF091034_1 GTP-binding protein RAB22A [Homo sapiens]
gi|16041684|gb|AAH15710.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|30582931|gb|AAP35695.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|39645547|gb|AAH63457.1| RAB22A, member RAS oncogene family [Homo sapiens]
gi|61361041|gb|AAX41977.1| RAB22A member RAS oncogene family [synthetic construct]
gi|119595902|gb|EAW75496.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595903|gb|EAW75497.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193787092|dbj|BAG52298.1| unnamed protein product [Homo sapiens]
gi|208967238|dbj|BAG73633.1| RAB22A, member RAS oncogene family [synthetic construct]
Length = 194
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|183232546|ref|XP_655103.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801978|gb|EAL49717.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709304|gb|EMD48591.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ L+ KI LGD +GKT + +++ + G G + KT+ + I IW+
Sbjct: 2 NTLMKQKIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWD 61
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF 197
G + + +P +DS A + ++D+ R + +SV +W + R + I + ++G K
Sbjct: 62 TAGQERYRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNK- 120
Query: 198 DDFIQLPIDLQWTIASQARAYAKALN--ATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
+DL +Q A AK N F +SA NIN+ ++ IT KL + +
Sbjct: 121 -------LDLGHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLSTLEPPV 173
Query: 256 ERNL 259
E ++
Sbjct: 174 EEHI 177
>gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sapiens]
Length = 194
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene family [Xenopus laevis]
gi|71682203|gb|AAI00187.1| Rab31 protein [Xenopus laevis]
Length = 193
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + +A+ YA ++NA +SA IN+N++ I+ ++
Sbjct: 122 ----LNDVREVLEKEAKDYADSINAVFVETSAKNAININELFIEISKRI 166
>gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|165971249|gb|AAI58651.1| Rab22a protein [Rattus norvegicus]
Length = 194
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ +I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ +L
Sbjct: 123 ----TDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRL 166
>gi|294460994|gb|ADE76067.1| unknown [Picea sitchensis]
Length = 209
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLGD +GKTS + +YV D + + + K L + G ++ SIW+ G
Sbjct: 12 FKLVLLGDGRVGKTSLVLRYVDDVFSDSQTATVQASYLTKRLNINGVVVTLSIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ- 202
+ P+ +D+ A L ++D+ + + V W ++ R+ I + I D ++
Sbjct: 72 RFHALGPIYYRDADAALLVYDIMDKDSFTRVRNWVKELRQMASKDIILAIAANKSDLVRS 131
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
IDLQ +A YA ++ A F +SA N + ++ IT + +
Sbjct: 132 QKIDLQ-----EAERYAASIGAKHFVTSAKLNTGIEQVFLDITTRALE 174
>gi|410335381|gb|JAA36637.1| RAB22A, member RAS oncogene family [Pan troglodytes]
Length = 196
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
ID++ + A+ YA +++A +SA IN+N++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELF 159
>gi|326430486|gb|EGD76056.1| GTP-binding protein yptV3 [Salpingoeca sp. ATCC 50818]
Length = 199
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LKI ++GD + GK+ L ++ D ++ P G++ +K L + G ++ ++W+ G
Sbjct: 8 LKILIIGDSNCGKSCLLMRFTDDTFDEHMGPTIGVDFKNKMLTLNGQQVKLTVWDTAGQD 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + + ++ ++D+T R T + +I W +A C+ + +++ K D+ Q
Sbjct: 68 RFKTLTASYYRGAHGVILVYDVTRRATFEHIIPWLNEANVYCDDNVVKMLVANKIDEPRQ 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ D + RA A+ N SA + V + + + ++ D P
Sbjct: 128 VSTD-------EGRALAREKNMLFIECSAKTKVGVQQAFEELAQQVLDTP 170
>gi|145549235|ref|XP_001460297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428126|emb|CAK92900.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LGD +GKTS + +++ D P G++ + KTL V + +W+ G +
Sbjct: 14 KIVFLGDQAVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFI 201
+ +P +DS A + FD+T+ + +++ RW + ++ + I I+G K D +
Sbjct: 74 FRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIYILGNKIDLENER 133
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
Q+P QA AK L A SA INV + K ++ L P
Sbjct: 134 QIP-------TKQAEDKAKELGAQFQEVSAKSAINVAEFFKKLSYDLLGNP 177
>gi|198427845|ref|XP_002120167.1| PREDICTED: similar to RAB12, member RAS oncogene family [Ciona
intestinalis]
Length = 223
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ L++ L+GD ++GKT FLE+Y D + G++ KT+ V G RI IW+ G
Sbjct: 25 LKLQMILIGDRNVGKTCFLERYTDDLFREESKSTVGIDFRIKTVTVGGRRIRLQIWDTAG 84
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD-D 199
+ +++ IL ++D+T+ + +++ +W + + ++ + + I+G K D +
Sbjct: 85 QERFNSITTAYYRNARGILLLYDVTNPESYRNITKWMKLIEEYGRSDVEVAIVGNKADLE 144
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI-LKFITAKLFDIPWTLERN 258
+Q+ +AR +A+ + +SA ++NV+ + + I L IP ERN
Sbjct: 145 NVQVN-------THKARNFAENCGFIFYETSAKASLNVDTVFVNLIYKILKQIPQPHERN 197
Query: 259 LTI 261
I
Sbjct: 198 PQI 200
>gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158284201|gb|EDP09951.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 211
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 9 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+R + + RW Q+ R + I ++G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTARWIQEVRTERGNDVIIFLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID + + A A+ LN +SA +N+ + + I A L
Sbjct: 128 ----LIDKRQVSIEEGDAKARELNVNFIETSAKAGLNIKALFRKIAAAL 172
>gi|154421140|ref|XP_001583584.1| Ras family protein [Trichomonas vaginalis G3]
gi|72536124|gb|AAZ73170.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121917826|gb|EAY22598.1| Ras family protein [Trichomonas vaginalis G3]
Length = 218
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
++ K+ +G+ +GKTS + +Y+ D P G++ KT+ G I IW+
Sbjct: 3 MIQHKVVFVGNSAVGKTSIINQYMYDSVSADHQPTVGIDFFAKTVNYEGKSIRMQIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G K +P +DS +F+FD+TSR + + + +W++ + II+G K D
Sbjct: 63 GQEKFHSLIPSYIRDSTVAIFVFDITSRSSFEDLEKWFKMVLDIANPRL-IIVGNKCD-- 119
Query: 201 IQLPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+D + + A YA +A +SA N+ ++ I +
Sbjct: 120 ----LDAEREVTKDDAEKYAIIKSADYIETSAIAPTNITELFNLIAS 162
>gi|302833886|ref|XP_002948506.1| RabH/Rab6 [Volvox carteri f. nagariensis]
gi|300266193|gb|EFJ50381.1| RabH/Rab6 [Volvox carteri f. nagariensis]
Length = 211
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 9 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+R + + RW Q+ R + I ++G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDITNRQSFLNTARWIQEVRTERGNDVIIFLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID + + A A+ LN +SA +N+ + + I A L
Sbjct: 128 ----LIDKRQVSIEEGDAKARELNVNFIETSAKAGLNIKALFRKIAAAL 172
>gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023906|gb|AAI35942.1| rab31 protein [Xenopus (Silurana) tropicalis]
Length = 194
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVPSGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ P+ + S A + ++D+T + T ++ +W ++ ++ + + I G K D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDTFHTLKKWVKELKEHGPENIVMAIAGNKCD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + AR YA+++ A + +SA INV ++ + I+ ++
Sbjct: 122 -LSDTREVTMKDAREYAESIGAIVVETSAKNAINVEELFQGISRRI 166
>gi|325188437|emb|CCA22973.1| Rab5 family GTPase putative [Albugo laibachii Nc14]
Length = 198
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ LLGD +GK+S + ++V + G + M K ++V I Y IW+ G
Sbjct: 11 VKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
K P+ + + A + ++D+T + +L ++ W ++ ++ I I I G K D D
Sbjct: 71 KYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDK 130
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P ++QA+AYA + A +SA + NV+ + I+ +L
Sbjct: 131 REVP-------SAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQL 171
>gi|148747177|ref|NP_077756.2| ras-related protein Rab-22A [Mus musculus]
gi|46577691|sp|P35285.2|RB22A_MOUSE RecName: Full=Ras-related protein Rab-22A; Short=Rab-22; AltName:
Full=Rab-14
gi|13879258|gb|AAH06596.1| RAB22A, member RAS oncogene family [Mus musculus]
gi|14422309|emb|CAC41378.1| RAB22A protein [Mus musculus]
gi|26327515|dbj|BAC27501.1| unnamed protein product [Mus musculus]
gi|74144602|dbj|BAE27289.1| unnamed protein product [Mus musculus]
gi|74151840|dbj|BAE29707.1| unnamed protein product [Mus musculus]
gi|112293001|dbj|BAF02878.1| Rab22A [Mus musculus]
gi|148674704|gb|EDL06651.1| RAB22A, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 194
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ +I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----TDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|1710019|sp|P51154.1|RB22A_CANFA RecName: Full=Ras-related protein Rab-22A; Short=Rab-22
Length = 194
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase
Length = 169
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 6/170 (3%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 2 SLRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 61
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G + + P+ + S A + ++D+T T ++ W ++ R+ +I + I G K D
Sbjct: 62 AGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCD 121
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 -----LTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|348685093|gb|EGZ24908.1| hypothetical protein PHYSODRAFT_350023 [Phytophthora sojae]
Length = 282
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS L +Y+ E ++ + +DK LLV R++ S+W+ G
Sbjct: 9 FKVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF--- 200
+ P+ +D+ L ++D+T + + V W ++ R+ I I I D
Sbjct: 69 RFHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRN 128
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++P D +AR YA+++ A F +SA N + + +T ++ +
Sbjct: 129 RKVPED-------EARRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLE 171
>gi|302815420|ref|XP_002989391.1| rab family GTPase [Selaginella moellendorffii]
gi|300142785|gb|EFJ09482.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLGD +GKTS + +YV ++ S + + K L V GA + SIW+ G
Sbjct: 11 FKVVLLGDGEVGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK--CNQTAIPIIIGTKFDDFI 201
+ P+ +D+ L ++D+ R + V W ++ RK N+ + I G K D
Sbjct: 71 RFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSDMDK 130
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+DLQ + YA ++ A F +SA N +++ I + +
Sbjct: 131 LRQVDLQ-----DSERYAASIGANHFVTSAKLNTGIDEAFMDIATRCLE 174
>gi|302758026|ref|XP_002962436.1| rab family GTPase [Selaginella moellendorffii]
gi|300169297|gb|EFJ35899.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLGD +GKTS + +YV ++ S + + K L V GA + SIW+ G
Sbjct: 11 FKVVLLGDGRVGKTSLVLRYVNNQFSDSQSATIQASYLTKRLSVDGAVATLSIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK--CNQTAIPIIIGTKFDDFI 201
+ P+ +D+ L ++D+ R + V W ++ RK N+ + I G K D
Sbjct: 71 RFHALGPIYYRDADGALLVYDIMDRDSFTRVKNWVKELRKMASNKNIVLTIAGNKSDMDK 130
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+DLQ + YA ++ A F +SA N +++ I + +
Sbjct: 131 LRQVDLQ-----DSERYAASIGANHFVTSAKLNTGIDEAFMDIATRCLE 174
>gi|301116125|ref|XP_002905791.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262109091|gb|EEY67143.1| Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 200
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 77 DADNLVA--LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISY 134
DA N A +K+ LLGD +GK+S + ++V + G + M K ++V I Y
Sbjct: 3 DAGNSKAREVKVVLLGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKY 62
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIG 194
IW+ G K P+ + + A + ++D+T + +L ++ W ++ ++ I I I
Sbjct: 63 QIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIA 122
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + ASQARAYA + A +SA + NV+ + I+ L
Sbjct: 123 GNKSDLEE----KREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQAL 172
>gi|168057732|ref|XP_001780867.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162667723|gb|EDQ54346.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 210
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ +Q P G++ + KT+ + + +W+
Sbjct: 9 LSKYKLVFLGDQSVGKTSIITRFMYDKFDQTYQPTIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++R + + RW ++ R + + + +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVIVYDVSNRQSFVNTARWVEEVRAERGKDVVLVLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A+ L+A + +SA N+ + + I L
Sbjct: 128 ----LVDKRQVSVEEGETKARELSALMIETSAKAGFNIKSLFRKIAGAL 172
>gi|67480359|ref|XP_655529.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56472674|gb|EAL50140.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790136|dbj|BAD82864.1| small GTPase EhRabX16 [Entamoeba histolytica]
gi|449710575|gb|EMD49626.1| small GTPase EhRabX16, putative [Entamoeba histolytica KU27]
Length = 203
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D ++ + KI ++GD ++GKTS +++YV E + P G+++ +KT+ + I +
Sbjct: 3 DFNDSIVFKIIVIGDANVGKTSLVKRYVDREFYKELKPTIGVDIKNKTININEENICLTF 62
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGT 195
++ G K K + A + ++D+T T SV +WY + R IP+ IIG
Sbjct: 63 FDTAGQEKFAAVTDSYFKGAKACIIVYDITKAVTFNSVDKWYNKLRNIVSDPIPVLIIGN 122
Query: 196 KFDDFIQLPIDLQWTIASQARA-YAKALNATLFFSSATYNINVNKILKFITAKLFD 250
K D I+ Q I + A A+ L A +S NV+K +K I+ ++ +
Sbjct: 123 KSD------IEQQRDITTDVGASLARKLGAFFIETSCLNGSNVDKAIKIISNEIIN 172
>gi|335290820|ref|XP_003356293.1| PREDICTED: ras-related protein Rab-39A-like [Sus scrofa]
Length = 219
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGD-------EKEQGGSPGEGLNMMDKTLLVR-GARISYS 135
+I+LLGD +GKTS L +YV D E E +P G+ +TL +R G R+
Sbjct: 10 FRIALLGDTAVGKTSLLRRYVADAPWIPEPEPELESAPTVGVEFYSRTLQLRAGPRVKLQ 69
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ--ARKCNQTAIPIII 193
+W+ G + + ++ + +L +FD+T+R + + + W+Q+ A + AI +++
Sbjct: 70 LWDTAGQERFRCITRSFYRNVVGVLLVFDVTNRKSFEHIRDWHQEVMATQGPDKAIFLLV 129
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
G K D +Q ++ A +A A +L +SA N NV+
Sbjct: 130 GHKSD--LQ---SMRCVSAQEAEELAASLGMAFVETSAKNNCNVD 169
>gi|56790148|dbj|BAD82870.1| small GTPase EhRabX22 [Entamoeba histolytica]
Length = 192
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LGD +GKT + +++ + G G + KT+ + I IW+ G +
Sbjct: 4 KIVFLGDSSVGKTCIIGRFMTGDFNTGYEATIGTDFSTKTMTFQNKSIQLQIWDTAGQER 63
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQL 203
+ +P +DS A + ++D+ R + +SV +W + R + I + ++G K
Sbjct: 64 YRSLIPSYIRDSSAAVIVYDINDRQSFESVDKWIEDVRSKEKGEIFLFLVGNK------- 116
Query: 204 PIDLQWTIASQARAYAKALN--ATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
+DL +Q A AK N F +SA NIN+ ++ IT KL + +E ++
Sbjct: 117 -LDLGHREVTQKEALAKGQNYQCMCFETSAKTNINITELFNAITEKLSTLEPPVEEHI 173
>gi|91089681|ref|XP_974614.1| PREDICTED: similar to Rab-protein 6 CG6601-PA [Tribolium castaneum]
gi|270012633|gb|EFA09081.1| hypothetical protein TcasGA2_TC006800 [Tribolium castaneum]
Length = 210
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L K+ LG+ +GKTS + K++ D + G++ + KT+ + + +W+
Sbjct: 13 SLQKYKLVFLGEQSVGKTSIITKFMYDSFDTAYQATVGIDFLSKTMYLTDKTVRLQLWDT 72
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD 198
G + + +P +DS + +FD+T+ T +W R + + I ++G K D
Sbjct: 73 AGQERFRSLIPAYIRDSSVAVVVFDVTNIETFHQTTKWINDVRMERGDSVIVFLVGNKVD 132
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D Q+ I+ + AK LN T +SA +N+ ++ K IT L
Sbjct: 133 LKDLRQVSIE-------EGEQKAKELNVTFVETSAKVGLNIKQLFKRITESL 177
>gi|307104270|gb|EFN52525.1| GTP binding protein [Chlorella variabilis]
Length = 211
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 9 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+TSR + ++ RW ++ R + I +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDVTSRQSFLNIQRWVEEVRAERGSDVIIVLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A A+ LN +SA N+ + + I A L
Sbjct: 128 ----LVDKRQVSIEEGDAKARELNVMFIETSAKAGFNIKALFRKIAAAL 172
>gi|407040045|gb|EKE39952.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 209
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+ I+L GD +GKT F +++ E + G +++ K L++ G + + +W+ G
Sbjct: 6 ISIALSGDAFVGKTCFFKRFSSGEFNPNTASSIGCDVICKKLILDGKQYNVQLWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW---YQQARKCNQTAIPIIIGTKFDDF 200
+ ++ ILFMFD+T+ + + W + + + ++ + +++G K D
Sbjct: 66 MFRSTTATYFRNRHCILFMFDVTNSESFTHIEDWMKVFYEIQNEDKKTLLVLVGNKNDMI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL-------FDIPW 253
+ + A+ +AK+ N F SA NIN++ I++F+ +L +P
Sbjct: 126 AERQVS-----PEDAKDFAKSHNINYFECSAKENINIDNIIEFVIRELRLQRMLVETLPK 180
Query: 254 TLERNLTIGEPII 266
+E+ I EPII
Sbjct: 181 EIEK---IDEPII 190
>gi|440290249|gb|ELP83675.1| rab5, putative [Entamoeba invadens IP1]
Length = 194
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N KI LLGD +GK+S + + E ++ G + KTL+V I + W+
Sbjct: 5 NTYQFKIVLLGDSSVGKSSIVLRVCKGEYKEFQENTIGAAFLTKTLIVDKDTIKFECWDT 64
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + P+ + S A L +FD+TS + +W + R+ + ++G K D
Sbjct: 65 AGQERYHSLTPMYYRGSNAALVVFDITSDSSYAQAKKWVDELRESANDTMIFLVGNKCD- 123
Query: 200 FIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ ++ + A AYA++++ +SA NINV+++ + KL
Sbjct: 124 -----LEGSRSVTKEDAEAYARSISVDYIETSAKSNINVSELFDLVARKL 168
>gi|118372409|ref|XP_001019401.1| Ras family protein [Tetrahymena thermophila]
gi|89301168|gb|EAR99156.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777780|dbj|BAJ21286.1| Rab-family small GTPase Rab11D [Tetrahymena thermophila]
Length = 363
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 63 TTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMD 122
TT S H+H + KI L+GD +GKT + +YV + P G+
Sbjct: 139 TTYNKSETHTHMY---------KIVLVGDAGVGKTHIINRYVKGQLPHAIIPTIGIEFAT 189
Query: 123 KTLLVR-GARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA 181
KT+ +R G I IW+ G K + + ++ L ++D+T + +S+ RW ++
Sbjct: 190 KTVTLRDGGTIKTQIWDTAGQEKYRSITSAHYRKAVGALLVYDVTKEKSFESIQRWLEEI 249
Query: 182 R-KCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLF-FSSATYNINVNK 239
R ++ + +++G K D I + + +A +AK N LF SSA +++N+N
Sbjct: 250 RLHADKDIVLMLVGNKV-DLIHKNPEQRKVSKIEATNFAKQ-NGLLFEESSALFDVNIND 307
Query: 240 ILKFITAKLFDIPWTLERNLTIGEPIID 267
+ + + +++D L+ ++ + +D
Sbjct: 308 VFERLLEEIYDQKCRLQSERSLIQTEVD 335
>gi|390594811|gb|EIN04220.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 272
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEK---EQGGSPGEGLNMMDKTLLVRGARISY 134
D + +K+ L+G+ +GK+SFL ++ DE+ E+ S G++ + V+G ++
Sbjct: 7 GDAPINVKLLLIGNSSVGKSSFLLRF-SDEQWLPEEEASATIGVDFRVHKMEVKGKKVKL 65
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIII 193
SIW+ G + + + + I+ M+D+++R + ++ RW+ + + + II+
Sbjct: 66 SIWDTAGQERFRTITSSYYRGAQGIILMYDVSNRESFDALPRWFSELETYVSPSVAKIIV 125
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP- 252
G K D + + A+A+ +++ +SA + V++ + + ++ D P
Sbjct: 126 GNKVDKEFSRQV-----ATGEGAAFAQRMDSLFIEASAKTAVGVSEAFEELVERIMDTPE 180
Query: 253 -WTLERNLTIGEPI 265
W +L I PI
Sbjct: 181 LWAARESLRIHSPI 194
>gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89268938|emb|CAJ82023.1| RAB22A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 193
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSTAAIIVYDITKEETFLTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA ++NA +SA IN+N++ I+ ++
Sbjct: 122 ----LNDVREVLEKDAKDYADSINAVFVETSAKNAININELFIEISKRI 166
>gi|327278061|ref|XP_003223781.1| PREDICTED: ras-related protein Rab-22A-like [Anolis carolinensis]
Length = 194
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LNDVREVMEKDAKDYADSIHAVFVETSAKNAININELFIEISRRI 166
>gi|399219055|emb|CCF75942.1| unnamed protein product [Babesia microti strain RI]
Length = 220
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLG+ GKTS + +++ D E G++ + KT+ V+ ++ +W+ G +
Sbjct: 19 KIVLLGEQSSGKTSIVTRFMYDTFESTYQATIGIDFLSKTITVKKTQLRLQLWDTAGQER 78
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQL 203
+ +P +DS A + +D+T+R + ++ +W R+ AI I++G K D
Sbjct: 79 FRSLMPSYIRDSSAAVITYDITNRKSFENTTKWIDDVRRERANNAILILVGNKTD----- 133
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGE 263
+D + + +AK +SA N++KI + L D ++TI E
Sbjct: 134 LVDKRQVSYEEGEEHAKKYGMIFQETSAKEGTNISKIFFDVAESLLDFN---AGSVTIPE 190
Query: 264 PIID 267
++D
Sbjct: 191 KLVD 194
>gi|380022458|ref|XP_003695062.1| PREDICTED: ras-related protein RabJ-like isoform 1 [Apis florea]
Length = 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG +GKTS + +Y+G + SP G + L + ARI +W+ G +
Sbjct: 7 KVVALGSQGVGKTSIIMRYIGKSCNEHLSPTIGASFFTCKLNLENARIMLRVWDTAGQER 66
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ P+ +++ A + +FDLT T ++ RW + R+ + ++IG K D +
Sbjct: 67 FRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSDLTKER 126
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
+D A + R YA + A+ + +S N + + I L + T
Sbjct: 127 QVD-----AEEGRVYATKIGASYYETSVLQNEGIKNVFLAIGNGLLKLSST 172
>gi|195350792|ref|XP_002041922.1| GM11275 [Drosophila sechellia]
gi|194123727|gb|EDW45770.1| GM11275 [Drosophila sechellia]
Length = 215
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI +LGDC +GK+ L ++ D + G++ +++ V G + IW+ GD
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVMLQIWDTAGDE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + LP + + IL ++D+TS + +S+ W ++ R C ++ +++G K DD
Sbjct: 68 RFKSLLPSYYRGATGILLVYDITSSKSFRSIDGWLEEIHRMCPESVNVLLVGNKCDDLDN 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ L+ Q YA SA NVN + ++ +++
Sbjct: 128 RQVRLE-----QGFNYANLRAIGFHEVSAKSGANVNDVFNTLSVGIYN 170
>gi|195558515|ref|XP_002077302.1| GD11278 [Drosophila simulans]
gi|194202401|gb|EDX15977.1| GD11278 [Drosophila simulans]
Length = 215
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI +LGDC +GK+ L ++ D + G++ +++ V G + IW+ GD
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVMLQIWDTAGDE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + LP + + IL ++D+TS + +S+ W ++ R C ++ +++G K DD
Sbjct: 68 RFKSLLPSYYRGATGILLVYDITSSKSFRSIDGWLEEIHRMCPESVNVLLVGNKCDDLDN 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ L+ Q YA SA NVN + ++ +++
Sbjct: 128 RQVRLE-----QGFNYANLRAIGFHEVSAKSGANVNDVFNTLSVGIYN 170
>gi|73535775|pdb|1Z0J|A Chain A, Structure Of Gtp-Bound Rab22q64l Gtpase In Complex With
The Minimal Rab Binding Domain Of Rabenosyn-5
Length = 170
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 4 LRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 63
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ +I + I G K D
Sbjct: 64 GLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCD- 122
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----LTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 167
>gi|167538835|ref|XP_001751068.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770407|gb|EDQ84120.1| predicted protein [Monosiga brevicollis MX1]
Length = 188
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+K+ LGD +GK+ +E+++ D+ + L + V G + W+ G
Sbjct: 7 GVKVICLGDSAVGKSKLVERFLMDDYKPHQLSTFALTLFRHNAKVEGKDVVVDFWDTAGQ 66
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ 202
+ P ++ + + +FD+T + T K+++ WY++ R+ + IP+I+ +
Sbjct: 67 ERFASVHPSYYHEAHSCILVFDVTRKVTYKNLLTWYKELREY-RPKIPVIV-------VA 118
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
ID+ +++ ++A + K N +F+SA+ NV KI
Sbjct: 119 NKIDVDYSVTNKAFGFPKKHNLPFYFASASDGTNVVKIF 157
>gi|67466429|ref|XP_649362.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56465788|gb|EAL43980.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790094|dbj|BAD82843.1| small GTPase EhRabK2 [Entamoeba histolytica]
gi|449707799|gb|EMD47391.1| small GTPase EhRabK2, putative [Entamoeba histolytica KU27]
Length = 209
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+ I+L GD +GKT F +++ E + G +++ K L++ G + + +W+ G
Sbjct: 6 ISIALSGDAFVGKTCFFKRFSSGEFNPNTASSIGCDVICKKLILDGKQYNVQLWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW---YQQARKCNQTAIPIIIGTKFDDF 200
+ ++ ILFMFD+T+ + + W + + + ++ + +++G K D
Sbjct: 66 MFRSTTATYFRNRHCILFMFDVTNSESFTHIEDWMEVFYEIQNEDKKTLLVLVGNKNDMI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL-------FDIPW 253
+ + A+ +AK+ N F SA NIN++ I++F+ +L +P
Sbjct: 126 AERQVS-----PEDAKDFAKSHNINYFECSAKENINIDNIIEFVIRELRLQRMLVETLPK 180
Query: 254 TLERNLTIGEPII 266
+E+ I EPI+
Sbjct: 181 EIEK---IDEPIV 190
>gi|71894915|ref|NP_001026038.1| ras-related protein Rab-22A [Gallus gallus]
gi|53130292|emb|CAG31475.1| hypothetical protein RCJMB04_6n2 [Gallus gallus]
Length = 194
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----NDVREVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|225710862|gb|ACO11277.1| Ras-related protein Rab-21 [Caligus rogercresseyi]
Length = 217
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS + +YV D+ + ++K L VRG R++ SIW+ G
Sbjct: 15 FKVVLLGEGCVGKTSCVLRYVDDQFNDRHITTLQASFLNKRLNVRGKRVNLSIWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ P+ +D+ + ++D++ + + V W ++ RK I ++I G K D
Sbjct: 75 RFHALGPIYYRDANGAILVYDISDLDSFRKVKVWIKELRKMLGNKIVLLIAGNKID---- 130
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + A YAK++ AT F +SA N ++++ +T ++
Sbjct: 131 -LEDSRQVETGTAEEYAKSVGATHFHTSAKDNTGIDELFLELTRQM 175
>gi|449274250|gb|EMC83533.1| Ras-related protein Rab-22A [Columba livia]
Length = 194
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----NDVREVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|429328144|gb|AFZ79904.1| Ras-related rab6 small GTP-binding protein, putative [Babesia equi]
Length = 224
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLG+ GKTS + ++V D + G++ + KT+ G + +W+ G +
Sbjct: 14 KIVLLGEQSAGKTSIVTRFVYDHFIPAYAATIGIDFLSKTVTANGKTMRLQLWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQL 203
+ +P +DS A + ++D+T+R + +W Q+ + A+ +I+G K D
Sbjct: 74 FRSLMPSYIRDSSAAIVVYDITNRDSFTRTKQWVQEIKDMRGDKAVIVIVGNKTD----- 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+D + + ++AK +N +SA NV+++ + KL
Sbjct: 129 LLDKRKVSYEEGESHAKEMNCLFRETSAKNGDNVHELFNLVAVKLL 174
>gi|403413519|emb|CCM00219.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEK---EQGGSPGEGLNMMDKTLLVRGARIS 133
D + V +K+ L+G+ +GK+S L ++ DE+ E S G++ + V+G ++
Sbjct: 6 DKTSTVNVKLLLIGNSSVGKSSLLLRF-SDEQWLPEDEASATIGVDFRVHKMEVKGKKVK 64
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPII 192
SIW+ G + + + + I+ ++D+ +R + ++ RWY + + + + II
Sbjct: 65 LSIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFDALPRWYSELETYVSPSVVKII 124
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+G K D + S+ + +A+ +N+ F +SA +I V + + + K+ D P
Sbjct: 125 VGNKVDKEFSRQVS-----HSEGQHFAERMNSLFFEASAKTSIGVREAFQEVVEKILDTP 179
>gi|313229766|emb|CBY18581.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEK---EQGGSPGEGLNMMDKTLLVRGARISYSIW 137
L L++ ++GD +GKTSF++++V + Q +P G++ K +LV R+ IW
Sbjct: 4 LAQLQLIIIGDSGVGKTSFMDRFVDSSQADFRQSFNPTVGIDFKVKNILVDDKRVKLQIW 63
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G K + + + M+D+T T KS+ +WYQ + + + ++G K
Sbjct: 64 DTAGQEKFNSITTAYYRSARGAIIMYDVTRPQTFKSIEKWYQLMSDHGRGDVEVALVGNK 123
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINV-NKILKFITAKLFDIPWTL 255
D +D + Q A L + SSA N+N+ N + + L ++P L
Sbjct: 124 CDLNSDKKVD-----SKQGENTATELGCHFYESSAKDNLNIENVFMGLVRNILVNMP--L 176
Query: 256 ER 257
ER
Sbjct: 177 ER 178
>gi|402218107|gb|EJT98185.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDE--KEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
LKI L+GD +GK+S L ++ E+ S G++ + + V G + SIW+ G
Sbjct: 13 LKILLIGDSSVGKSSLLLRFSDQSFLSEEESSATIGVDFKVQRIEVDGVKYKLSIWDTAG 72
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDF 200
+ + + + ++ ++D++SR + + RW+ + C + +I+G K D
Sbjct: 73 QERFRTITSSYYRGAQGVILVYDVSSRESFDDLPRWFTELETYCGPSVAKVIVGNKIDKE 132
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ ++ +AYA+ + A SSA I+V+++ + I K+ P ++N
Sbjct: 133 FSRRVP-----TAEGQAYAERMGALFLESSAKRGIHVDEVFQTIVRKIVATPELWQKN 185
>gi|194893325|ref|XP_001977854.1| GG18010 [Drosophila erecta]
gi|195479590|ref|XP_002100946.1| GE17342 [Drosophila yakuba]
gi|190649503|gb|EDV46781.1| GG18010 [Drosophila erecta]
gi|194188470|gb|EDX02054.1| GE17342 [Drosophila yakuba]
Length = 201
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ D G++ +T+ + G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW ++ + +++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTNGDSFANVRRWLEEIQNNCDVVKKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
P D + I A+ +AK ++ LF +SA NINV + IT ++ D
Sbjct: 125 P-DRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
>gi|20129057|ref|NP_608373.1| Rab35, isoform A [Drosophila melanogaster]
gi|320542347|ref|NP_001188678.1| Rab35, isoform B [Drosophila melanogaster]
gi|442617060|ref|NP_001259739.1| Rab35, isoform D [Drosophila melanogaster]
gi|195345901|ref|XP_002039507.1| GM22691 [Drosophila sechellia]
gi|195567823|ref|XP_002107458.1| GD15551 [Drosophila simulans]
gi|7289283|gb|AAF45371.1| Rab35, isoform A [Drosophila melanogaster]
gi|20151577|gb|AAM11148.1| LD21953p [Drosophila melanogaster]
gi|194134733|gb|EDW56249.1| GM22691 [Drosophila sechellia]
gi|194204865|gb|EDX18441.1| GD15551 [Drosophila simulans]
gi|220944822|gb|ACL84954.1| Rab35-PA [synthetic construct]
gi|220954600|gb|ACL89843.1| Rab35-PA [synthetic construct]
gi|318069472|gb|ADV37760.1| Rab35, isoform B [Drosophila melanogaster]
gi|440216975|gb|AGB95578.1| Rab35, isoform D [Drosophila melanogaster]
Length = 201
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ D G++ +T+ + G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW ++ + +++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
P D + I A+ +AK ++ LF +SA NINV + IT ++ D
Sbjct: 125 P-DRKVVITEDAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 170
>gi|156382558|ref|XP_001632620.1| predicted protein [Nematostella vectensis]
gi|156219678|gb|EDO40557.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
D++ LK+ LLGD +GK+ + ++V D P G M K ++V ++IW+
Sbjct: 8 DSIRELKVCLLGDAGVGKSCLVHRFVSDIFNASSPPTIGAAFMTKMMIVNDKAYKFNIWD 67
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF 197
G + + P+ +D+ A + ++D+T T S+ W ++ ++ I I + G K
Sbjct: 68 TAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKC 127
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D Q + +Q A+ +A +++A +SA + NV+ + + + KL
Sbjct: 128 DKADQRDVQVQ-----DAQDFAGSVDAIFAETSALTSKNVHWLFEELCKKL 173
>gi|301090951|ref|XP_002895671.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097098|gb|EEY55150.1| Rab21/Rab5 family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS L +Y+ E ++ + +DK LLV R++ S+W+ G
Sbjct: 9 FKVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNRRVALSLWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF--- 200
+ P+ +D+ L ++D+T + + V W ++ R+ I I I D
Sbjct: 69 RFHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRN 128
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++P D +A+ YA+++ A F +SA N + + +T ++ +
Sbjct: 129 RKVPED-------EAKRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLN 171
>gi|224078511|ref|XP_002199135.1| PREDICTED: ras-related protein Rab-22A [Taeniopygia guttata]
Length = 194
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LNDVREVMEKDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|110761970|ref|XP_001122072.1| PREDICTED: ras-related protein RabJ-like [Apis mellifera]
Length = 221
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG +GKTS + +Y+G + +P G + L V ARI +W+ G +
Sbjct: 7 KVVALGSQGVGKTSIIMRYIGKSCNEHLNPTIGASFFTCKLNVENARIMLRVWDTAGQER 66
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ P+ +++ A + +FDLT T ++ RW + R+ + ++IG K D +
Sbjct: 67 FKSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEVMTLVVIGNKSDLTKER 126
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
+D A + R YA + A+ +S N + + I + L + T
Sbjct: 127 QVD-----AEEGRVYATKIGASYHETSVLQNEGIKNVFLAIGSGLLKLSST 172
>gi|321465957|gb|EFX76955.1| hypothetical protein DAPPUDRAFT_305964 [Daphnia pulex]
Length = 213
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI LLG+ +GKTS + +YV D+ + + + K + + G R++ +IW+ G
Sbjct: 14 FKIVLLGEGCVGKTSLVLRYVEDKFHEKHFSTIQASFLTKKINLEGQRVTLAIWDTAGQE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ P+ +DS A + ++D+T + + V W ++ R+ + I+G K D
Sbjct: 74 RFHALGPIYYRDSHAAILVYDITDQDSFVKVQNWVKELRRILGDKVVLAIVGNKID---- 129
Query: 203 LPIDLQWTI-ASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+D + + A +A Y+K++ AT + +SA N + ++ +T +L
Sbjct: 130 --LDKERNVPAEEALEYSKSVGATHYQTSAKTNRGIEELFLDLTQQLL 175
>gi|12852239|dbj|BAB29331.1| unnamed protein product [Mus musculus]
Length = 194
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDD 199
G + + P+ + S A + ++D+T T ++ W ++ R+ + + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKAETFSTLENWVRELRQHGPHSMVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|346980173|gb|EGY23625.1| septum-promoting GTP-binding protein [Verticillium dahliae VdLs.17]
Length = 271
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + KYV ++ G+N M+KT+ +R I++SIW++
Sbjct: 148 NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIRNTEITFSIWDL 207
Query: 140 TGDAKAQDHLPVACKDSIAILFM 162
G + + LP+ C D++AILF+
Sbjct: 208 GGQREFVNMLPLVCNDAVAILFI 230
>gi|301104324|ref|XP_002901247.1| ras family GTPase, putative [Phytophthora infestans T30-4]
gi|262101181|gb|EEY59233.1| ras family GTPase, putative [Phytophthora infestans T30-4]
Length = 278
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS L +Y+ E ++ + +DK LLV R++ S+W+ G
Sbjct: 9 FKVVLLGEGRVGKTSILLRYIKGEYDERQVSTLQASYLDKRLLVDNCRVALSLWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF--- 200
+ P+ +D+ L ++D+T + + V W ++ R+ I I I D
Sbjct: 69 RFHALGPIYYRDADGALLVYDITDAESFRKVRTWVRELRRIVGDDISICIAGNKSDLHRN 128
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++P D +A+ YA+++ A F +SA N + + +T ++ +
Sbjct: 129 RKVPED-------EAKRYAESVGAAHFDTSAKLNRGLEDVFVELTRRMLN 171
>gi|312082931|ref|XP_003143650.1| hypothetical protein LOAG_08070 [Loa loa]
gi|307761187|gb|EFO20421.1| hypothetical protein LOAG_08070 [Loa loa]
Length = 219
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 60 VPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLN 119
VP T++ +L L+ KI LLG+ +GKTS + +Y+ + +
Sbjct: 4 VPSTSITNNL-----------LLNFKIVLLGEGAVGKTSLMLRYIENRFNPQHVSTLQAS 52
Query: 120 MMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQ 179
+ K L V G + +IW+ G K P+ +DS L ++D+T + + V W +
Sbjct: 53 FLCKKLHVDGQTVELNIWDTAGQEKFHALGPIYYRDSHGALLIYDITDTHSFEKVKMWVK 112
Query: 180 Q-ARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
+ R +IIG K D +D+ ++A YAK + A F +SA NI V
Sbjct: 113 ELKRMLGDDVYLMIIGNKLDLERNRNVDI-----NEAIGYAKLIGAKHFETSAKDNIGVT 167
Query: 239 KILKFITAKLFD 250
++ ++ L +
Sbjct: 168 QVFDYLVKGLVE 179
>gi|340052328|emb|CCC46604.1| putative small GTP-binding protein RAB6 [Trypanosoma vivax Y486]
Length = 223
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD +GKTS + +++ E+ G++ KTLL+ G + +W+ G +
Sbjct: 12 KVVLLGDQSVGKTSIITRFINGTFEESYHATIGIDFFSKTLLLDGVTVRLHVWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPIIIGTKFDDFIQ 202
+ +P +DS A L ++D+ SR + + +W R + N+T I +++G K D+
Sbjct: 72 FRALIPGYIRDSAATLVVYDVASRLSFLNTFKWVDDVRALRGNETII-VLVGNKSDEH-- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A +A+ A SA V + K + L
Sbjct: 129 ---ERREVTAEEAQEKADEYGIMFTEVSAMLGTGVGALFKKVAETL 171
>gi|195170968|ref|XP_002026283.1| GL24681 [Drosophila persimilis]
gi|194111178|gb|EDW33221.1| GL24681 [Drosophila persimilis]
Length = 375
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG-SPGEGLNMMDKTLLVRGARISYSIW 137
D+ V K LLGD +GKTSFL KY E G S G+ + +K ++V G R+ IW
Sbjct: 173 DDTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIW 232
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTK 196
+ G + + +D+ A+L ++D+T++ T ++ W + R+ Q + I+ IG K
Sbjct: 233 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNK 292
Query: 197 FD 198
D
Sbjct: 293 AD 294
>gi|123500553|ref|XP_001327882.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121910818|gb|EAY15659.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 196
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI LLGD +GKTS L+K+V + P G + +V G + S+ IW+ G
Sbjct: 8 IKIVLLGDQAVGKTSLLQKWVVGNYDVNLPPTVGGATQIRQDVVEGVKYSFQIWDTAGAE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + P+ +D+ A + +FDLTS+ ++ ++ +W + + ++P II+G K D
Sbjct: 68 RYRALTPLYTRDAAAAMIVFDLTSQTSVDNIKQWVEFVHQ--HGSMPFIIVGNKED---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
+D Q +A A ++ + F +SA NV+
Sbjct: 122 -LVDEQIITPEEALELAFSVQSQFFATSAKTGNNVD 156
>gi|195131589|ref|XP_002010233.1| GI14806 [Drosophila mojavensis]
gi|193908683|gb|EDW07550.1| GI14806 [Drosophila mojavensis]
Length = 201
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
RH D K+ ++GD +GK+S L ++ D G++ +T+ + G R+
Sbjct: 3 RHFDH----MFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVEINGLRVK 58
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII 193
IW+ G + + + + ++ ++D+T+ + +V RW ++ + +++
Sbjct: 59 LQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLV 118
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
G K DD P D + I A+ +A+ ++ LF +SA NINV + IT ++ D
Sbjct: 119 GNKNDD----P-DRKVVITEDAQRFARQMDIELFETSAKDNINVEDMFLSITRQVLD 170
>gi|307190847|gb|EFN74693.1| Ras-related protein Rab-21 [Camponotus floridanus]
Length = 224
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS +YV D+ + ++K L + G R++ +IW+ G
Sbjct: 13 FKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
K P+ + S + ++D+T T + V W ++ +K + I ++I G K D
Sbjct: 73 KFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVD---- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
L D I +A YAK + A F +SA N N+ ++ +T ++ + E+ T+
Sbjct: 129 LEKDRNVAI-DEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTRRMMERADEAEQKSTL 186
>gi|432858229|ref|XP_004068856.1| PREDICTED: ras-related protein Rab-22A-like [Oryzias latipes]
Length = 194
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GKTS + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKTSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAVIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + A+ YA++++A +SA IN+N++ I+ ++
Sbjct: 122 ----LSDAREVSEKDAKDYAESIHAIFVETSAKNAININEVFTEISKRI 166
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LKI L+GD +GKT+ L ++ D+ G+ KT+ + G I IW+ G
Sbjct: 10 LKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + +I L ++D+T+ T S+ +W ++ R+ ++ I +++G K D Q
Sbjct: 70 RYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKCDLSEQ 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ ++ A +AKA N +SA NVN+ + + ++ +
Sbjct: 130 RAV-----TSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVN 172
>gi|24668006|ref|NP_649303.2| Rab26, isoform B [Drosophila melanogaster]
gi|75027268|sp|Q9VP48.2|RAB26_DROME RecName: Full=Ras-related protein Rab-26; Flags: Precursor
gi|23094227|gb|AAF51708.2| Rab26, isoform B [Drosophila melanogaster]
gi|201065999|gb|ACH92409.1| FI07640p [Drosophila melanogaster]
Length = 388
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG-SPGEGLNMMDKTLLVRGARISYSIW 137
D+ V K LLGD +GKTSFL KY E G S G+ + +K ++V G R+ IW
Sbjct: 186 DDTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIW 245
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTK 196
+ G + + +D+ A+L ++D+T++ T ++ W + R+ Q + I+ IG K
Sbjct: 246 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNK 305
Query: 197 FD 198
D
Sbjct: 306 AD 307
>gi|221123404|ref|XP_002154758.1| PREDICTED: ras-related protein Rab-22A-like [Hydra magnipapillata]
Length = 196
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ LLGD +GK+S + ++V D + + G + M KT+ + Y IW+ G
Sbjct: 9 IKLCLLGDSGVGKSSLVLRFVTDRFDIQSTATIGASFMSKTISLGENSYKYQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
K + P+ + + A + ++DLT T KSV W ++ R+ + I I G K D Q
Sbjct: 69 KYKSLAPMYYRGAAAAIVVYDLTVENTFKSVKTWVRELRELGPPGLVIAIAGNKSDLKDQ 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ L+ YA + A SA + NV I + IT KL
Sbjct: 129 REVSLE-----AGENYASEIGAVFAEVSALTSQNVAYIFQEITKKL 169
>gi|16902020|gb|AAL27637.1| GH21984p [Drosophila melanogaster]
Length = 388
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG-SPGEGLNMMDKTLLVRGARISYSIW 137
D+ V K LLGD +GKTSFL KY E G S G+ + +K ++V G R+ IW
Sbjct: 186 DDTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIW 245
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTK 196
+ G + + +D+ A+L ++D+T++ T ++ W + R+ Q + I+ IG K
Sbjct: 246 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNK 305
Query: 197 FD 198
D
Sbjct: 306 AD 307
>gi|145535658|ref|XP_001453562.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834359|emb|CAI44524.1| rab_B51 [Paramecium tetraurelia]
gi|124421284|emb|CAK86165.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LG+ +GKTS +E++V + + P G++ + K + + G + +W+ G +
Sbjct: 10 KLVFLGNSFVGKTSIIERFVQNTFDPKSQPTVGIDFISKNMTIDGKTMRLLLWDTAGQER 69
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQL 203
+P +D+ + +FD+TSR + +S+ RW+++ ++ A+ +I+G K
Sbjct: 70 FHSLIPGYVRDAQCAVIVFDVTSRHSFESLDRWFKEVKQTRGNEALIVILGNK------- 122
Query: 204 PIDLQWTI-ASQARAYA 219
ID + + A +AR YA
Sbjct: 123 -IDAERVVSADEAREYA 138
>gi|196008565|ref|XP_002114148.1| hypothetical protein TRIADDRAFT_58315 [Trichoplax adhaerens]
gi|190583167|gb|EDV23238.1| hypothetical protein TRIADDRAFT_58315 [Trichoplax adhaerens]
Length = 210
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGA---RISY 134
D + K+ LLG GKTS + +Y+ + P G KT+ L+ G ++
Sbjct: 2 DEVHTTKVVLLGRTGSGKTSLIVRYISSVFSENVKPTIGAAFSKKTVQLIHGEERKQVVL 61
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIII 193
+IW+ GD + + P+ ++S A + FDL R + V W ++ K Q I
Sbjct: 62 AIWDTAGDERYESMAPLYYRNSSAAIICFDLADRQSYNKVDFWVKELVEKVEQNCKLYIC 121
Query: 194 GTKFDDFIQLPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAK----- 247
GTK D + L+ + ++ AYAK LNA +S+ N ++ + K + A
Sbjct: 122 GTKTDLLAEYGGPLKRAVGPTEVMAYAKKLNAKFVETSSKSNYGIDDLFKLVAADFAGFT 181
Query: 248 LFDIPWTLERNLTIGEP 264
L + P +E +L + EP
Sbjct: 182 LCEAP-PIEDSLRLQEP 197
>gi|340500436|gb|EGR27313.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 201
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 75 HLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISY 134
+L + + V KI LGD H+GKT +E+++ D ++ P G++ + KTL V I
Sbjct: 12 NLSSASRVKHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTVGVDFLAKTLHVDDKTIRL 71
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-III 193
+W+ G + + +P +D+ + +FD+T++ + + RW + + P I++
Sbjct: 72 QLWDTAGQERFRSLIPSYLRDATCAVIVFDVTNKESFSNTERWIKDYKDNRGAEAPCILV 131
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
K D +Q I + AK+ + SA NV + K + +L
Sbjct: 132 ANKIDQKLQREISQE-----DGEKKAKSFEMNYYEISAKTGENVVNMFKSMALQL 181
>gi|156547415|ref|XP_001604485.1| PREDICTED: ras-related protein Rab-21-like [Nasonia vitripennis]
Length = 222
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS + +YV D+ + K L + G R++ +IW+ G
Sbjct: 11 FKVVLLGEGCVGKTSVVLRYVEDKFNDKHISTLQASFFKKKLNINGKRVNLAIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
K P+ + S + ++D+T T K V W ++ +K + I + I G K D
Sbjct: 71 KFHALGPIYYRMSNGAILVYDITDEETFKKVKNWVKELKKMLGSDICLAIAGNKVD---- 126
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
L + TI +A YAK + A F +SA N+NV ++ +T ++ E+ T+
Sbjct: 127 LEKERNVTI-EEAEEYAKQVGAVHFHTSAKQNLNVEEMFLDLTRRMMQHADQQEQKSTL 184
>gi|194224580|ref|XP_001490105.2| PREDICTED: ras-related protein Rab-22A-like [Equus caballus]
Length = 194
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ + I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELGQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----VDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|345803388|ref|XP_850610.2| PREDICTED: ras-related protein Rab-31 [Canis lupus familiaris]
Length = 195
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|401885802|gb|EJT49887.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 2479]
Length = 222
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDE--KEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
LK+ L+G+ +GK+S L ++ D+ E+ + G++ K++ V G R SIW+ G
Sbjct: 13 LKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTAG 72
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDF 200
+ + + + ++ ++D+T R T +I+W+++ C + + II+G K D
Sbjct: 73 QERFRTLTSSYYRGAQGVILVYDVTQRNTFDELIKWFREIDTYCAEDVVKIIVGNKVDKV 132
Query: 201 IQLPID--------LQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ I + + +A+A + SA + VN + + ++ + P
Sbjct: 133 TLVAIRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQVLVRRILETP 192
Query: 253 --WT 254
WT
Sbjct: 193 SLWT 196
>gi|82596931|ref|XP_726467.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii]
Length = 282
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 10/202 (4%)
Query: 67 PSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
P H H L K+ LG+ +GKTS + +++ D + G++ + KTL
Sbjct: 70 PCFIHFVFHFSDSGLNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLY 129
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCN 185
+ + +W+ G + + +P +DS A + ++D+T+R + ++ +W Q +
Sbjct: 130 LDEGPVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERG 189
Query: 186 QTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+ I +++G K D DL+ + A+ N +SA N+ + K I
Sbjct: 190 KDVIIVLVGNKTD-----LADLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIA 244
Query: 246 AKLFDIPWTLERNLTIGEPIID 267
AKL P LE N ++D
Sbjct: 245 AKL---P-NLENNNNHEANVVD 262
>gi|389749162|gb|EIM90339.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 214
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 75 HLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISY 134
+ + +L KI LLGD +GKTS + +++ D + G++ + KTL + +
Sbjct: 11 EISSTSLKRTKIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTLYLDDRTVRL 70
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIII 193
+W+ G + + +P +DS + +FD+T+R + S +W R + + +++
Sbjct: 71 QLWDTAGQERFRSLIPSYIRDSTVAIVVFDITNRASFMSTTKWIDDVRSERGNDVMVVLV 130
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
G K D + + L+ +A A ++ LN +SA NV + K I L
Sbjct: 131 GNKADLSDKRQVTLE-----EATAKSQQLNIMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|116004109|ref|NP_001070412.1| ras-related protein Rab-31 [Bos taurus]
gi|115305074|gb|AAI23832.1| RAB31, member RAS oncogene family [Bos taurus]
Length = 195
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|154420093|ref|XP_001583062.1| Ras family protein [Trichomonas vaginalis G3]
gi|121917301|gb|EAY22076.1| Ras family protein [Trichomonas vaginalis G3]
Length = 200
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD ++GKTS + ++ D P + + + G R+ +IW+ G
Sbjct: 17 FKVVLVGDGYVGKTSIINRFYSDHFSTNEPPTIAASFLPIAMNKNGKRVVLNIWDTAGHE 76
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQ 202
K +P+ + + ++ +FDLT+ T ++ WY + Q + I+ G K D
Sbjct: 77 KFHCLVPLYARAANTLIVVFDLTNEMTFENAKEWYTKTILDVGQIPVCILCGNKLD---- 132
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L D T + +AKA N +SA NV ++ K IT KL
Sbjct: 133 LMPDANTT---KYEDWAKAHNCLFITTSAANGTNVQEMFKTITEKL 175
>gi|390462760|ref|XP_003732900.1| PREDICTED: ras-related protein Rab-22A-like [Callithrix jacchus]
Length = 228
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G + +
Sbjct: 44 LLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRA 103
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
P+ + S A + ++D+T T ++ W ++ R+ I + I D ID+
Sbjct: 104 LAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL----IDV 159
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 160 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 200
>gi|317737971|ref|NP_001188086.1| ras-related protein rab-22a [Ictalurus punctatus]
gi|308323839|gb|ADO29055.1| ras-related protein rab-22a [Ictalurus punctatus]
Length = 197
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 4 SLRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 63
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G + + P+ + S A + ++D+T + ++ W ++ + + I + I G K D
Sbjct: 64 AGQERFRALAPMYYRGSAAAIIVYDITKEESFLTLKNWVKELHQHGPSNIVVAIAGDKCD 123
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
D + + A+ YA +++A +SA IN+N+I I+ K IP LER+
Sbjct: 124 -----VSDAREVLEKDAKDYADSIHAIFVETSAKNAININEIFTEISQK---IPL-LERS 174
Query: 259 LT 260
T
Sbjct: 175 ET 176
>gi|156366329|ref|XP_001627091.1| predicted protein [Nematostella vectensis]
gi|156213990|gb|EDO34991.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS + +YV D+ + ++K L + G R++ +IW+ G
Sbjct: 10 FKVVLLGEGCVGKTSLMLRYVQDKFNDKHLTTLQASFLNKRLNINGQRVNLAIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ P+ +DS + ++D+T + V W ++ +K I + I G K D
Sbjct: 70 RFHALGPIYYRDSNGAILVYDITDEDSFLKVKNWVRELKKMLGDDICLCIAGNKID---- 125
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
L D + AS A AYAK + A F +SA N + ++ +T ++ D
Sbjct: 126 LEKD-RHVEASDAEAYAKTVGAKHFHTSAKLNKGIEEMFFELTKRMVD 172
>gi|195376775|ref|XP_002047168.1| GJ13283 [Drosophila virilis]
gi|194154326|gb|EDW69510.1| GJ13283 [Drosophila virilis]
Length = 358
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG-SPGEGLNMMDKTLLVRGARISYSIW 137
D+ + K LLGD +GKTSFL KY E G S G+ + +K ++V G R+ IW
Sbjct: 156 DDTINHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIW 215
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTK 196
+ G + + +D+ A+L ++D+T++ T ++ W + R+ Q + I+ IG K
Sbjct: 216 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTFDNIRAWLGEIREYAQEDVVIVLIGNK 275
Query: 197 FD 198
D
Sbjct: 276 AD 277
>gi|340504816|gb|EGR31228.1| rab11b protein, putative [Ichthyophthirius multifiliis]
Length = 208
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIW 137
D + + KI L+GD +GKT+ L++YV ++ Q +P G+ K ++++ G +I IW
Sbjct: 5 DTIESYKIVLVGDASVGKTNLLKRYVKNQLPQNPAPTIGVEFATKQVVLKDGVKIKTQIW 64
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTK 196
+ G + + + ++ L ++D+T + SV +W + + + + + ++G K
Sbjct: 65 DTAGQERYRSITSAHYRRAVGALLVYDITKEKSYSSVTKWMEDLKYQADPDIVIFLVGNK 124
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKLFD 250
D ++ + +AR + AL +FF +SA NVN++ + + ++++
Sbjct: 125 L-DLVEKNESARKVSKEEARNF--ALENKMFFEETSAVTAQNVNEVFEKLLQEIYN 177
>gi|167523210|ref|XP_001745942.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775743|gb|EDQ89366.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLG +GKTS + +YV D E S G + L V G R+ +W+ G +
Sbjct: 4 KIVLLGAQSVGKTSLVLRYVDDAFEDAVSSTIGASFFTHKLTVDGCRVKLQLWDTAGQER 63
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+ P+ + S A L ++D+T+ +L V W + ++ T+ + I D ++
Sbjct: 64 FRSMAPMYYRGSSAALIVYDVTTPKSLDEVKGWMAELQRNTDTSTVMCICANKVDLLKDD 123
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L + R+YAK NA F +SA +N+ + +L
Sbjct: 124 AHL----VEKGRSYAKQTNAIFFETSAKTGAGINEAFMAVVREL 163
>gi|123484727|ref|XP_001324326.1| Ras family protein [Trichomonas vaginalis G3]
gi|121907207|gb|EAY12103.1| Ras family protein [Trichomonas vaginalis G3]
Length = 205
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
K L+GD ++GKTS + ++ D+ ++ + + M L + I IW+ G
Sbjct: 12 TFKFLLVGDSNVGKTSLVHRFCRDDFDECMTSTISVEFMTSILKIDQTPIKLQIWDTAGQ 71
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFI 201
+ + ++++ +L F LTS+ + + WYQ RK CN A +++GTK D
Sbjct: 72 EEYKSLGKAYYRNAVGVLLCFSLTSQDSFSHIEEWYQDVRKLCNPNARIVLVGTKCD--- 128
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+ + S+A+ +A+ + +S+ N NV + +T + +
Sbjct: 129 --LVKEKKVADSEAKQFAQVHDIEYMETSSKTNTNVQDLFYTMTQDVLKL 176
>gi|441639329|ref|XP_003277577.2| PREDICTED: ras-related protein Rab-22A [Nomascus leucogenys]
Length = 250
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G + +
Sbjct: 66 LLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRA 125
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
P+ + S A + ++D+T T ++ W ++ R+ I + I D ID+
Sbjct: 126 LAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL----IDV 181
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 182 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 222
>gi|195402069|ref|XP_002059632.1| GJ14874 [Drosophila virilis]
gi|194147339|gb|EDW63054.1| GJ14874 [Drosophila virilis]
Length = 202
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 8/181 (4%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
D KI +LGD +GKT L+++V + G++ +T+ + G ++ IW+
Sbjct: 2 DERYVFKILMLGDAGVGKTCLLQRFVENRFTGNYKCTVGVDSKIRTVEISGHKVKLQIWD 61
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF 197
G+ + + + + I+ +FD T R + ++V W ++ K T + I ++G K
Sbjct: 62 TAGEERYRSMMSSYYRHVQGIILVFDTTRRRSYQNVDYWLKEIDKHAATNVRILLVGNKC 121
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D F + Q A YA++L T +SA NV ++ + +FD +ER
Sbjct: 122 DAFQGRQVCQQ-----SAAIYAESLGVTYVEASAVTGANVERLFANLAVSIFDTH--VER 174
Query: 258 N 258
N
Sbjct: 175 N 175
>gi|417396875|gb|JAA45471.1| Putative gtpase [Desmodus rotundus]
Length = 195
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|296473718|tpg|DAA15833.1| TPA: RAB31, member RAS oncogene family [Bos taurus]
Length = 182
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|395511731|ref|XP_003760106.1| PREDICTED: ras-related protein Rab-31 [Sarcophilus harrisii]
Length = 195
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFNTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPM-------KDAKEYAESIGAVVVETSAKCAINIEELFQGISRQI 167
>gi|351723117|ref|NP_001235476.1| uncharacterized protein LOC100527651 [Glycine max]
gi|255632858|gb|ACU16782.1| unknown [Glycine max]
Length = 213
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A ++ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIDAAL 170
>gi|340500595|gb|EGR27462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 169
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V KI LGD H+GKT +E+++ D ++ P G++ + KTL + I +W+ G
Sbjct: 18 VKHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRLQLWDTAG 77
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIG 194
+ + +P +D+ + +FD+TS+ + S+ +W + + P IIG
Sbjct: 78 QERFRSLIPSYLRDATCAVIVFDVTSQESFNSIDKWVKDYKDHRGPEAPCIIG 130
>gi|322778765|gb|EFZ09181.1| hypothetical protein SINV_03538 [Solenopsis invicta]
Length = 228
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS +YV D+ + ++K L + G R++ +IW+ G
Sbjct: 12 FKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
K P+ + S + ++D+T T + V W ++ +K + I ++I G K D
Sbjct: 72 KFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVD---- 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
L D I +A YAK + A F +SA N N+ ++ +T ++ E+ T+
Sbjct: 128 LEKDRNVAI-EEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTQRMMQHADEAEQKSTL 185
>gi|224046076|ref|XP_002190163.1| PREDICTED: ras-related protein Rab-31 [Taeniopygia guttata]
Length = 195
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC--NQTAIPIIIGTKFD--D 199
+ P+ + S A + ++D+T + + ++ +W ++ ++ A+P I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENNAMP-IAGNKCDLSD 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA +N+ ++ + I+ ++
Sbjct: 126 IREVPM-------KDAKEYAESIGAIVVETSAKNAVNIEELFQGISQQI 167
>gi|355714893|gb|AES05152.1| RAB31, member RAS oncoprotein family [Mustela putorius furo]
Length = 194
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 167
>gi|339522127|gb|AEJ84228.1| Ras-related protein Rab-40C [Capra hircus]
Length = 281
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ L+GD +GK LE G E + G++ T+L+ G R +W+ +G
Sbjct: 15 LKLLLVGDSDVGKGEILESLQGGPAESPYAYSNGIDYKTTTILLDGRRFKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + AIL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQAILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
P Q QARAYA+ T F S N NV
Sbjct: 131 PFKRQ-VPTEQARAYAERNCMTFFEVSPLCNFNV 163
>gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio]
Length = 196
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 2 SLRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 61
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 62 AGQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD 121
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 -----LSDAREVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>gi|56118785|ref|NP_991282.2| ras-related protein Rab-22A [Danio rerio]
gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio]
gi|182889502|gb|AAI65262.1| Rab22a protein [Danio rerio]
Length = 196
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFIETSAKNAININEVFTQISERI 166
>gi|156085268|ref|XP_001610116.1| Rab11b protein [Babesia bovis T2Bo]
gi|154797368|gb|EDO06548.1| Rab11b protein, putative [Babesia bovis]
Length = 232
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYS 135
D DN+ KI LLGD +GK+ L Y+ + G+ +T+ L G +
Sbjct: 5 DYDNV--YKIILLGDATVGKSHLLSHYIRGTLPKQAKATIGVEFATRTVPLASGGTVKAQ 62
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IG 194
IW+ G + + + ++ L ++D+T+R + + +W + R + I ++ +G
Sbjct: 63 IWDTAGQERYRSITSAHYRRAVGALLVYDITNRQSFYNCHKWLDELRMAAEPDIVVVLVG 122
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
K D IQ P ++ QA +A N LF +SA NV + +F+ ++ ++
Sbjct: 123 NKIDLAIQDP-SVRQVHREQATMFANEWNLHLFEASAVSGYNVKDVFEFLLQEIHNL 178
>gi|403352976|gb|EJY76019.1| Rab6, RAB family GTPase [Oxytricha trifallax]
Length = 221
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LGD +GKTS + +++ D ++ G++ M + V I ++W+ G +
Sbjct: 17 KVVFLGDQSVGKTSIIHRFIYDSFDENYQATIGIDFMSHKMYVEDKIIILNLWDTAGQER 76
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQL 203
+ +P KDS + +FD+TSR + +SV +W + A+ + +I+ G K D Q
Sbjct: 77 FKSLIPSYIKDSAVAIVVFDITSRQSFQSVDKWIEDAKNLRDDDVLLILAGNKADLADQR 136
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + +A YA N F SA N+ + KL
Sbjct: 137 QVSYE-----EATDYAAKRNIMYFEVSARAGTNITMCFNQLAKKL 176
>gi|196002379|ref|XP_002111057.1| hypothetical protein TRIADDRAFT_23051 [Trichoplax adhaerens]
gi|190587008|gb|EDV27061.1| hypothetical protein TRIADDRAFT_23051 [Trichoplax adhaerens]
Length = 200
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI LGD +GK+ +E+++ D+ + L + + G I IW+ G
Sbjct: 24 IKIICLGDSAVGKSKLVERFLMDDYKPQQLSTYALTLFRYNTTMNGKSIGVDIWDTAGQE 83
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ P + A + FD+T + T K++ RWY++ R+ + +++ K
Sbjct: 84 RFASLHPSYYHQAHACILTFDVTRKITYKNLSRWYKELREYRPSIPCVVVANK------- 136
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
ID+ ++I ++ + K N +F SA+ NV K+ +
Sbjct: 137 -IDVDFSITKKSFNFVKKHNLPFYFVSASDGTNVVKVFR 174
>gi|325192953|emb|CCA27337.1| ras family GTPase putative [Albugo laibachii Nc14]
Length = 308
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI LLG+ +GKTS L +Y+ E + +DK L+V R+ SIW+ G
Sbjct: 12 FKIVLLGEGRVGKTSILLRYIKGEYTDQQVSTLQASYLDKRLMVDNTRVQLSIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
+ P+ +D+ + ++D+T + + V W ++ R+ I I+I G K D
Sbjct: 72 RFHALGPIYYRDADGAVLVYDITDEESFRKVRTWVKELRRIVGDEIDILIAGNKSDLHRN 131
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
++ + +A YA ++ AT F +SA N + ++ ++ ++
Sbjct: 132 RKVNEE-----EANNYAASVGATHFSTSAKLNRGLEEVFVDLSRRML 173
>gi|213514424|ref|NP_001134194.1| Ras-related protein Rab-22A [Salmo salar]
gi|209731382|gb|ACI66560.1| Ras-related protein Rab-22A [Salmo salar]
Length = 195
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDNFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISQRI 166
>gi|409082156|gb|EKM82514.1| hypothetical protein AGABI1DRAFT_111121 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199982|gb|EKV49906.1| GTP binding protein [Agaricus bisporus var. bisporus H97]
Length = 214
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 22 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 81
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W + R + I +++G K D +
Sbjct: 82 FRSLIPSYIRDSSVAIVVFDITNRQSFMSTTKWIEDVRSERGNDVIIVLVGNKADLSDKR 141
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ L+ +A A A LN +SA NV + K I L
Sbjct: 142 QVTLE-----EATAKATQLNIMFMETSAKAGHNVKGLFKKIAMSL 181
>gi|346467757|gb|AEO33723.1| hypothetical protein [Amblyomma maculatum]
Length = 214
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGD---EKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
K+ LLGD +GKTS + +YV + EK+Q L K +++ G I+ +IW+
Sbjct: 49 FKLVLLGDGRVGKTSLVLRYVNNVFSEKQQATVQASYLT---KRVVIEGVPITLAIWDTA 105
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + P+ +D+ A L ++D+T + V +W ++ ++ I I I D
Sbjct: 106 GQERFHALGPIYYRDADAALLVYDMTDNDSFVRVRKWVKELQQMASKTIIIAIAANKSDL 165
Query: 201 IQ-LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
++ D+Q +A +YA ++ A +F +SA ++++
Sbjct: 166 VRSKKFDIQ-----EAESYAASIGARVFVTSAKSGEGIDEVF 202
>gi|403282653|ref|XP_003932756.1| PREDICTED: ras-related protein Rab-22A [Saimiri boliviensis
boliviensis]
Length = 248
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
LLGD +GK+S + ++V D + +P G + M KT+ + + IW+ G + +
Sbjct: 64 LLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRA 123
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
P+ + S A + ++D+T T ++ W ++ R+ I + I D ID+
Sbjct: 124 LAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL----IDV 179
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 180 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 220
>gi|348537324|ref|XP_003456145.1| PREDICTED: ras-related protein Rab-22A-like [Oreochromis niloticus]
Length = 194
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD- 198
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 199 -DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D ++P A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 SDAREVP-------EKDAKDYADSIHAIFVETSAKNAININEVFVEISKRI 166
>gi|195046772|ref|XP_001992215.1| GH24326 [Drosophila grimshawi]
gi|193893056|gb|EDV91922.1| GH24326 [Drosophila grimshawi]
Length = 201
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
RH D K+ ++GD +GK+S L ++ D G++ +T+++ G R+
Sbjct: 3 RHFDH----MFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGLRVK 58
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII 193
IW+ G + + + + ++ ++D+T+ + +V W ++ + +++
Sbjct: 59 LQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRTWLEEIKHNCDVVNKVLV 118
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
G K DD P D + I A+ YA+ ++ LF +SA NINV + IT ++ +
Sbjct: 119 GNKNDD----P-DRKVVITEDAQRYARQMDIELFETSAKDNINVEDMFMSITRQVLN 170
>gi|62901101|sp|Q921E2.1|RAB31_MOUSE RecName: Full=Ras-related protein Rab-31
gi|15341792|gb|AAH13063.1| RAB31, member RAS oncogene family [Mus musculus]
Length = 194
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|77404176|ref|NP_659562.2| ras-related protein Rab-31 [Rattus norvegicus]
gi|49119014|gb|AAH72698.1| RAB31, member RAS oncogene family [Rattus norvegicus]
Length = 195
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 167
>gi|356563429|ref|XP_003549965.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 213
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A ++ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAAL 170
>gi|123967398|ref|XP_001313874.1| Ras family protein [Trichomonas vaginalis G3]
gi|121895785|gb|EAY00957.1| Ras family protein [Trichomonas vaginalis G3]
Length = 196
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V K+ +GD +GKTS + Y ++ + P G N + T+ + G +S +IW+ G
Sbjct: 8 VKGKVVFVGDASVGKTSLIYHY--NQTKGNPLPTVGANSVPCTVPIEGKTVSLNIWDTAG 65
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFI 201
Q +P+ + S A + ++D T++ + ++ WY+ A + + II+ K
Sbjct: 66 QENFQCLVPMFARCSNAAIIVYDSTNKQSFDNIALWYKYAIEESNVPNVIIVSNKS---- 121
Query: 202 QLPIDLQWTI-ASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
DL+ I A + + + N LFF+SA NV+ + + I A++ D + + N
Sbjct: 122 ----DLESVITAEEIHSMKEKYNCPLFFTSAITGSNVDILFREI-AEIVDKEQSKDANRA 176
Query: 261 IGEPI 265
I +PI
Sbjct: 177 IDQPI 181
>gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Rattus norvegicus]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEYGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
>gi|15224916|ref|NP_181989.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|297828175|ref|XP_002881970.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|75318653|sp|O80501.1|RAH1B_ARATH RecName: Full=Ras-related protein RABH1b; Short=AtRABH1b; AltName:
Full=Ras-related protein Rab6A; Short=AtRab6A
gi|3341681|gb|AAC27463.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|21593488|gb|AAM65455.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis thaliana]
gi|110742258|dbj|BAE99055.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|297327809|gb|EFH58229.1| hypothetical protein ARALYDRAFT_903887 [Arabidopsis lyrata subsp.
lyrata]
gi|330255353|gb|AEC10447.1| Ras-related protein RABH1B [Arabidopsis thaliana]
gi|741994|prf||2008312A GTP-binding protein
Length = 208
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR + + +W + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + +A A A+ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|225579124|ref|NP_598446.2| ras-related protein Rab-31 [Mus musculus]
gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculus]
gi|74186712|dbj|BAE34811.1| unnamed protein product [Mus musculus]
gi|112293003|dbj|BAF02879.1| Rab22B [Mus musculus]
Length = 195
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|167522685|ref|XP_001745680.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776029|gb|EDQ89651.1| predicted protein [Monosiga brevicollis MX1]
Length = 201
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+++ ++GD +GK+S +Y +E + G++ + KT+ V I +W+ G
Sbjct: 7 VRVIMVGDSTVGKSSMAARYSRNEFYEQAISTIGVDFVLKTMQVDSKTIKMQVWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + + + A+L ++D+T+ ++ S+ W ++AR + + I IIG KFD +
Sbjct: 67 RFRSITHSYYRGADAVLVVYDITNADSVDSLSGWVERARAHAKVDVAIFIIGNKFD--LY 124
Query: 203 LPID-LQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
P D Q T SQA+ A+ L F +SA +INV I
Sbjct: 125 DPADPQQVTNVSQAQHLARKLGLHHFVASAKSDINVQDIF 164
>gi|1457954|gb|AAC50773.1| Rab22b [Homo sapiens]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|62900806|sp|Q6GQP4.2|RAB31_RAT RecName: Full=Ras-related protein Rab-31; AltName: Full=GTP-binding
protein Rab0
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
>gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 196
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|2500069|sp|Q13636.1|RAB31_HUMAN RecName: Full=Ras-related protein Rab-31; AltName: Full=Ras-related
protein Rab-22B
gi|10179679|gb|AAG13847.1|AF234995_1 small GTPase RAB22B [Homo sapiens]
gi|20379090|gb|AAM21105.1|AF498957_1 small GTP binding protein RAB31 [Homo sapiens]
gi|1388195|gb|AAB02832.1| low-Mr GTP-binding protein Rab31 [Homo sapiens]
gi|47115255|emb|CAG28587.1| RAB31 [Homo sapiens]
gi|54696916|gb|AAV38830.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|54696918|gb|AAV38831.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60818832|gb|AAX36478.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356180|gb|AAX41217.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61356190|gb|AAX41218.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61363035|gb|AAX42323.1| RAB31 member RAS oncogene family [synthetic construct]
gi|189054712|dbj|BAG37334.1| unnamed protein product [Homo sapiens]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|338728025|ref|XP_001489577.2| PREDICTED: ras-related protein Rab-31-like [Equus caballus]
Length = 195
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|301759461|ref|XP_002915568.1| PREDICTED: ras-related protein Rab-22A-like [Ailuropoda
melanoleuca]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+LK+ L+ D +GK+S + ++V D + +P G + M KT+ + + IW+ G
Sbjct: 5 SLKLCLIQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ 202
+ + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL-- 122
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 --IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family variant [Homo sapiens]
Length = 195
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [synthetic construct]
gi|54696914|gb|AAV38829.1| RAB31, member RAS oncogene family [synthetic construct]
gi|60830380|gb|AAX36926.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366036|gb|AAX42804.1| RAB31 member RAS oncogene family [synthetic construct]
gi|61366043|gb|AAX42805.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|33589861|ref|NP_006859.2| ras-related protein Rab-31 [Homo sapiens]
gi|332849489|ref|XP_523865.3| PREDICTED: uncharacterized protein LOC468476 isoform 2 [Pan
troglodytes]
gi|426385456|ref|XP_004059230.1| PREDICTED: ras-related protein Rab-31 [Gorilla gorilla gorilla]
gi|9963781|gb|AAG09690.1|AF183421_1 small GTP-binding protein rab22b [Homo sapiens]
gi|12654623|gb|AAH01148.1| RAB31, member RAS oncogene family [Homo sapiens]
gi|60655513|gb|AAX32320.1| RAB31 member RAS oncogene family [synthetic construct]
gi|119622001|gb|EAX01596.1| RAB31, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984139|gb|ABM83504.1| RAB31, member RAS oncogene family [synthetic construct]
gi|123998237|gb|ABM86720.1| RAB31, member RAS oncogene family [synthetic construct]
gi|410217198|gb|JAA05818.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410266338|gb|JAA21135.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308006|gb|JAA32603.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308008|gb|JAA32604.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410308010|gb|JAA32605.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352351|gb|JAA42779.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352353|gb|JAA42780.1| RAB31, member RAS oncogene family [Pan troglodytes]
gi|410352355|gb|JAA42781.1| RAB31, member RAS oncogene family [Pan troglodytes]
Length = 195
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|410055384|ref|XP_001135766.3| PREDICTED: ras-related protein Rab-22A [Pan troglodytes]
Length = 230
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
++R L + ++L + LLGD +GK+S + ++V D + +P G + M KT+ +
Sbjct: 31 NNRSLGFTSSISL-LCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNEL 89
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
+ IW+ G + + P+ + S A + ++D+T T ++ W ++ R+ I +
Sbjct: 90 HKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVV 149
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
I D ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 150 AIAGNKCDL----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 202
>gi|388454460|ref|NP_001253365.1| ras-related protein Rab-31 [Macaca mulatta]
gi|402902630|ref|XP_003914202.1| PREDICTED: ras-related protein Rab-31-like [Papio anubis]
gi|380809112|gb|AFE76431.1| ras-related protein Rab-31 [Macaca mulatta]
gi|384945010|gb|AFI36110.1| ras-related protein Rab-31 [Macaca mulatta]
Length = 194
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|385303401|gb|EIF47476.1| putative rab family gtp-binding protein [Dekkera bruxellensis
AWRI1499]
Length = 217
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 89/180 (49%), Gaps = 7/180 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A+N +++K+ LLG+ +GK+S + ++V ++ E+ P G + + ++ I + IW
Sbjct: 5 ANNQISVKLVLLGEAAVGKSSLVLRFVSNDFEENKEPTIGAAFLTQRCIIGDKNIKFEIW 64
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQ-ARKCNQTAIPIIIGT 195
+ G + + P+ +++ A L ++D+T + S R W ++ + ++ + ++G
Sbjct: 65 DTAGQERFANLTPLYYRNAQAALVVYDVTKPSSFLSXQRHWVKELHEQASKNIVIALVGN 124
Query: 196 KFDDFIQLPIDLQWTIA-----SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
KFD + + A + + A+ N F +SA +NVNK+ I K+ D
Sbjct: 125 KFDLILDPESGEEIEGARKVSIDEGKXLAEEENLLFFETSAKTGLNVNKVFTTIGEKIPD 184
>gi|356497062|ref|XP_003517383.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 207
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [synthetic construct]
Length = 195
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>gi|255575776|ref|XP_002528787.1| protein with unknown function [Ricinus communis]
gi|223531790|gb|EEF33609.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EGEAKARDLNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L ++V +E Q G+ K++ + G + IW+ G
Sbjct: 14 FKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDTAGQE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + ++++ L ++D+T R + +++ +W + A + I++G K D Q
Sbjct: 74 RYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCDLSDQ 133
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
I ++ +A +A++ N +SA NVN K + ++F I + N +
Sbjct: 134 RAIKIE-----EAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKISQVGKFNQQVK 188
Query: 263 E 263
E
Sbjct: 189 E 189
>gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31 In Complex With A Gtp
Analogue
Length = 192
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 83
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 84 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 143
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 144 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 184
>gi|317418736|emb|CBN80774.1| Ras-related protein Rab-22A [Dicentrarchus labrax]
Length = 194
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD- 198
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 199 -DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D ++P A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 SDAREVP-------EKDAKDYADSIHAIFVETSAKNAININEVFIEISKRI 166
>gi|255645626|gb|ACU23307.1| unknown [Glycine max]
Length = 211
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ + E G +P G++ K L V G R+ +IW+ G
Sbjct: 13 LSFKILLIGDSAVGKSSLLVSFISNSAE-GIAPTIGVDFKIKMLTVGGKRLKLTIWDTAG 71
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSV-IRWYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T ++ + W ++ NQ + +++G K D
Sbjct: 72 QERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKVD 131
Query: 199 DFIQLPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D + ++ + A A+ L F SA NV + + + K+ ++P LE
Sbjct: 132 R------DSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEE 185
Query: 258 NLT 260
T
Sbjct: 186 GST 188
>gi|307174062|gb|EFN64749.1| Ras-related protein Rab-24 [Camponotus floridanus]
Length = 201
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 12/185 (6%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE---GLNMMDKTLLVRGARISYSI 136
N V LKI LLG+ +GKTS +++YV D G P + G K + V G + I
Sbjct: 2 NRVDLKIVLLGNAMVGKTSLMQRYVHDSF-NGNRPYQNTIGTVFAAKQVQVNGVSLVMGI 60
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G K + + A + +D+T T + W ++ R + + TK
Sbjct: 61 WDTAGSEKYDAMTRTYYRGAKAAIVCYDITKFSTFQRAKHWVRELRSIEENCKVYLCATK 120
Query: 197 FD----DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
D F+ DLQ T+ YA+ LF +S+ NV+K+ I P
Sbjct: 121 KDLCDEGFVSDDPDLQNTV----EKYARGTQTKLFITSSKTGENVDKLFDEIVQDFVSNP 176
Query: 253 WTLER 257
L++
Sbjct: 177 ENLQQ 181
>gi|195375225|ref|XP_002046402.1| GJ12523 [Drosophila virilis]
gi|194153560|gb|EDW68744.1| GJ12523 [Drosophila virilis]
Length = 220
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKTS L+++ G+ E+ G+ G++ KT+ V G ++ IW+ G
Sbjct: 22 FKIVLIGDCCTGKTSILQRFKTGNYVERHGNTI-GVDFSMKTIEVEGKQVKLQIWDTAGQ 80
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFI 201
+ + + + ++ ++D+T R T ++ +W ++ R+ + + II IG K D
Sbjct: 81 ERFRTITQSYYRANNGVIIVYDITKRSTFANLQKWIEEVRRYTASNVLIILIGNKCDLEA 140
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ +D + +AR + + LF +SA N NV + + +L
Sbjct: 141 EREVDFE-----EARQMCQYIPEILFVMETSAKENTNVEDAFRCLATEL 184
>gi|440793018|gb|ELR14219.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 195
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+R T RW + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDITNRTTFLDTARWVEDIRAERGNDVILMLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + A + + AK A +SA NV + + + A L
Sbjct: 126 ----LADKRCVSAEEGESKAKEFGAMFIETSAKAGYNVKPLFRQVAAAL 170
>gi|212537727|ref|XP_002149019.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
gi|210068761|gb|EEA22852.1| RAB GTPase Ypt5, putative [Talaromyces marneffei ATCC 18224]
Length = 218
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL-T 260
+ P D + + A AYAK F +SA N NV ++ I KL + RNL T
Sbjct: 138 ENP-DKRAIATADAEAYAKEAGLLFFETSAKTNTNVKELFTAIAKKL-PLDQAGPRNLRT 195
Query: 261 IGEPIIDF 268
P +D
Sbjct: 196 NARPGVDL 203
>gi|255640576|gb|ACU20573.1| unknown [Glycine max]
Length = 213
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|449703887|gb|EMD44244.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 196
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ ++G+ +GKT + ++V D+ + G+ M+ K + V G ++ IW+ G
Sbjct: 3 MKLIMIGESSVGKTCCMNRFVSDQFSEVTKSTVGVGMVSKEMEVNGIKVKLQIWDTAGQE 62
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ ++++ + MFD+++R + ++V W K + + ++ G K D
Sbjct: 63 RFATLSSNYFRNAMGGVIMFDVSNRQSFENVSNWIDACNKIEEKRVLVLAGNKTD----- 117
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+D + + A AK F SA + +N++ + +T ++ +P +N
Sbjct: 118 -LDERVITKEEGEARAKEFGLKYFEVSAKTGVGINEMFETLTKEIVALPKAEAQN 171
>gi|91078236|ref|XP_966494.1| PREDICTED: similar to Ras-related small GTPase isoform 1 [Tribolium
castaneum]
gi|270003941|gb|EFA00389.1| hypothetical protein TcasGA2_TC003235 [Tribolium castaneum]
Length = 216
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS + +YV D+ + ++K L + G RI+ +IW+ G
Sbjct: 12 FKVVLLGEGCVGKTSLVLRYVEDKFNTNHVTTVQASFLNKKLNIDGKRINLAIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
K P+ + S + ++D+T + + V W ++ RK I ++I G K D
Sbjct: 72 KFHALGPIYYRSSNGAVLVYDITDEDSFQKVKSWVKELRKMLGADICLVIAGNKTDLEKN 131
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ L+ +A AYA + A F +SA N V ++ +T K+ +
Sbjct: 132 RNVSLE-----EAEAYAIKVGAIHFQTSAKLNKGVEEMFLVLTQKMLE 174
>gi|623586|gb|AAA74117.1| putative [Nicotiana tabacum]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 82/169 (48%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + ++ +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVALQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ +A A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EAEAKARELNVMFIETSAKAGFNIKPLFRKIAAAL 170
>gi|356541335|ref|XP_003539133.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABH1b-like
[Glycine max]
Length = 236
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTAKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|195135342|ref|XP_002012093.1| GI16780 [Drosophila mojavensis]
gi|193918357|gb|EDW17224.1| GI16780 [Drosophila mojavensis]
Length = 219
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKTS L+++ G+ E+ G+ G++ KT+ V G ++ IW+ G
Sbjct: 22 FKIVLIGDCCTGKTSILQRFKTGNYVERHGNTI-GVDFSMKTIEVEGKQVKLQIWDTAGQ 80
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFI 201
+ + + + ++ ++D+T R T ++ +W ++ R+ + + II IG K D
Sbjct: 81 ERFRTITQSYYRANNGVIIVYDITKRATFANLQKWIEEVRRYTASNVLIILIGNKCDLES 140
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ +D + +AR + + LF +SA N NV + + +L
Sbjct: 141 EREVDFE-----EARQMCQYIPEILFVMETSAKENTNVEDAFRCLATEL 184
>gi|13537433|dbj|BAB40671.1| small GTPase RabD1 [Entamoeba histolytica]
Length = 196
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 82/175 (46%), Gaps = 6/175 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ ++G+ +GKT + ++V D+ + G+ M+ K + V G ++ IW+ G
Sbjct: 3 MKLIMIGESSVGKTCCMNRFVSDQFSEVTKSTVGVGMVSKEMEVNGIKVKLQIWDTAGQE 62
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ ++++ + MFD+++R + ++V W K + + ++ G K D
Sbjct: 63 RFATLSSNYFRNAMGGVIMFDVSNRQSFENVSNWIDGCNKIEEKRVLVLAGNKTD----- 117
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+D + + A AK F SA + +N++ + +T ++ +P +N
Sbjct: 118 -LDERVITKEEGEARAKEFGLKYFEVSAKTGVGINEMFETLTKEIVALPKAEAQN 171
>gi|12084567|pdb|1G17|A Chain A, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
gi|12084568|pdb|1G17|B Chain B, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
Length = 170
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ IW+ G
Sbjct: 4 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 63
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 64 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 119
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + A Q A AK L SSA + NVN+I F AKL
Sbjct: 120 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 162
>gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus]
Length = 195
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPWGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 167
>gi|405974092|gb|EKC38762.1| Ras-related protein Rab-31 [Crassostrea gigas]
Length = 224
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ LLG+ +GK+S + ++V D + G + M K L V + IW+ G
Sbjct: 6 VKVCLLGESGVGKSSIVLRFVSDSFKGALESTIGASFMTKRLEVGDVSYQFQIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
K + P+ + + A + ++D+T T ++V W ++ R C + I G K D
Sbjct: 66 KYRSLAPMYYRGASAAIIVYDITREATYRTVKDWVRELKRNCTADMVIAIAGNKSD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
DL+ A A YA+++ A +SA +NV + I KL +I +E
Sbjct: 122 -LNDLREVRARDAEEYAQSIGALFIETSALSAVNVPHLFTAI-GKLCNINSAVE 173
>gi|303388805|ref|XP_003072636.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303301777|gb|ADM11276.1| Rab GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 201
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D++ KI L+G+ +GKT +++Y + S G++ K+L V G R+
Sbjct: 1 MDSECKYLFKIILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVEGERVKLQ 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIG 194
IW+ G + + + + + I+ +FD+ S+ + ++ W + RK N+ II+G
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFNNLGDWLSEVRKNTNENVEIIILG 120
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALN---ATLFFSSATYNINVNKILKFITAKLFD 250
K DD ++ I + + N ++ + +SA NI VN +++T KL D
Sbjct: 121 NKVDDKEKIVI-----TEEEIERFLGENNIEKSSFYMTSAKDNICVNDSFEYLTRKLID 174
>gi|146180823|ref|XP_001021546.2| Ras-related protein Rab11, putative [Tetrahymena thermophila]
gi|146144367|gb|EAS01301.2| Ras-related protein Rab11, putative [Tetrahymena thermophila SB210]
gi|307777778|dbj|BAJ21285.1| Rab-family small GTPase Rab11E [Tetrahymena thermophila]
Length = 206
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 92/179 (51%), Gaps = 7/179 (3%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++ D + KI L+GD +GKT L++Y +E + +P G+ K + ++ G ++
Sbjct: 1 MEKDTIATYKIVLVGDTSVGKTHLLKRYSKNELPKNSAPTIGVEFGTKEVTLKDGTKVKA 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-II 193
IW+ G + + L + + ++ L ++D+T T S+++W + + I I ++
Sbjct: 61 QIWDTAGQERYRGILSLHFRRAVGALLVYDITKEKTYNSIMKWMEDLKYLADPDIVIMLV 120
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKLFD 250
G K D + + + +IA +A+ + AL+ L F +SA N+ ++ + + ++++
Sbjct: 121 GNKLDLVTKTQENRKVSIA-EAQQF--ALDNKLIFKETSAVLGTNIKEVFEQLLQEIYN 176
>gi|224067425|ref|XP_002302484.1| predicted protein [Populus trichocarpa]
gi|222844210|gb|EEE81757.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A A+ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|449018630|dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [Cyanidioschyzon
merolae strain 10D]
Length = 211
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W
Sbjct: 9 AAALSKYKLVFLGDQAVGKTSIITRFMYDKFDNNYQATIGIDFLSKTMYLEDRTVRLQLW 68
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTK 196
+ G + + +P +DS + ++D+TSR + + +W ++ R + I +++G K
Sbjct: 69 DTAGQERFRSLIPSYIRDSSVAVVVYDVTSRRSFLNTAKWIEEVRNERGNEVIIVLVGNK 128
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + ++ + A AK L+ +SA NV + + I A L
Sbjct: 129 SDQNDKRQVSVE-----EGEAKAKELDVLFIETSAKTGANVKALFRKIAAAL 175
>gi|388514011|gb|AFK45067.1| unknown [Lotus japonicus]
Length = 210
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDIASRQTFLNTSKWIEEVHSERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + +A A A+ LN +SA N+ + + I A L
Sbjct: 126 ----LVEKRQVSTEEAEAKARELNVMFIEASAKAGFNIKALFRKIAAAL 170
>gi|302692114|ref|XP_003035736.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
gi|300109432|gb|EFJ00834.1| hypothetical protein SCHCODRAFT_81164 [Schizophyllum commune H4-8]
Length = 210
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 18 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 77
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W R + I +++G K D L
Sbjct: 78 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKAD----L 133
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q T+ +A A A+ LN +SA NV + K I L
Sbjct: 134 SDKRQVTL-EEATAKAQQLNIMFMETSAKAGHNVKSLFKKIAMSL 177
>gi|387017964|gb|AFJ51100.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 202
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +TL++ G R+ I
Sbjct: 5 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTLVINGERVKLQI 62
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + +++ ++ ++D+T+ + +V RW + + I++G K
Sbjct: 63 WDTAGQERFRTITSTYYRNTHGVIIVYDVTNAESFVNVKRWLHEIGQNCDNVCKILVGNK 122
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+D + ++ + AR +++ + LF +SA N+NV ++ IT
Sbjct: 123 CEDLSRKQVE-----TADARRFSEQMGVRLFETSAKENLNVEEMFNAITT 167
>gi|348520672|ref|XP_003447851.1| PREDICTED: ras-related protein Rab-15-like [Oreochromis niloticus]
Length = 211
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
++ +LGD +GKT L ++ + + G++ KTL V G ++ IW+ G
Sbjct: 9 FRLLMLGDSGVGKTCMLRRFTESDFDTTHISTIGIDFKMKTLEVDGTKVRVQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ Q + + I+F++D+T + + K + +W + Q I+IG K DD ++
Sbjct: 69 RYQTITKQYYRRAQGIIFVYDITDKLSFKHIAKWVSDVDEYTTQKMETILIGNKCDDSLR 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+ +Q A + F +SA+ NIN+++ K +T
Sbjct: 129 REVS-----KNQGTKLAGSYGMEFFETSASKNINISESFKRLT 166
>gi|195394019|ref|XP_002055643.1| GJ19473 [Drosophila virilis]
gi|194150153|gb|EDW65844.1| GJ19473 [Drosophila virilis]
Length = 201
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
RH D K+ ++GD +GK+S L ++ D G++ +T+++ G R+
Sbjct: 3 RHFDH----MFKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGLRVK 58
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII 193
IW+ G + + + + ++ ++D+T+ + +V RW ++ + +++
Sbjct: 59 LQIWDTAGQERFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLV 118
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
G K DD P D + I A+ +A+ ++ LF +SA N+NV + IT ++ +
Sbjct: 119 GNKNDD----P-DRKVVITEDAQRFARQMDIELFETSAKDNLNVEDMFLSITRQVLN 170
>gi|307203700|gb|EFN82666.1| Ras-related protein Rab-21 [Harpegnathos saltator]
Length = 243
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N K+ LLG+ +GKTS +YV D+ + ++K L + G R++ +IW+
Sbjct: 10 NGYNFKVVLLGEGCVGKTSVALRYVEDKFNDRHISTVQASFLNKKLNINGKRVNLAIWDT 69
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G K P+ + S + ++D+T T + V W ++ +K + I + I G K D
Sbjct: 70 AGQEKFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLAIAGNKVD 129
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
L D I +A YAK + A F +SA N N+ ++ +T ++ E+
Sbjct: 130 ----LEKDRNVAI-EEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTRRMMQHADEAEQK 184
Query: 259 LTI 261
T+
Sbjct: 185 STL 187
>gi|357612151|gb|EHJ67842.1| Ras-related small GTPase [Danaus plexippus]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS L +Y+ D+ ++K L + G RI+ SIW+ G
Sbjct: 11 FKVVLLGEGCVGKTSLLLRYIEDKYNDKHLTTLQATFLNKKLNINGKRINLSIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
K P+ ++S + ++D+T + V W ++ RK + I ++I G K D
Sbjct: 71 KFHALGPIYYRNSNGAILVYDITDEDSFGKVKNWVKELRKMLGSDIVLVIAGNKIDLEQD 130
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ L+ +A +YA + A F +SA N V ++ +T ++
Sbjct: 131 RTVPLE-----EAESYAVMVGARHFNTSAKMNQGVEELFLELTREM 171
>gi|332022383|gb|EGI62695.1| Ras-related protein Rab-21 [Acromyrmex echinatior]
Length = 239
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS +YV D+ + ++K L + G R++ +IW+ G
Sbjct: 12 FKVVLLGEGCVGKTSVALRYVEDKFNDKHITTLQASFLNKKLNINGKRVNLAIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQ 202
K P+ + S + ++D+T T + V W ++ +K + I ++I G K D
Sbjct: 72 KFHALGPIYYRMSNGAILVYDITDEDTFQKVKNWVKELKKMLGSEICLVIAGNKVD---- 127
Query: 203 LPIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
++ +A+ +A YAK + A F +SA N N+ ++ +T ++ E+ T+
Sbjct: 128 --LEKDRNVATEEAEEYAKQVGAMHFHTSAKLNQNIEEMFLDLTQRMMQRADEAEQKSTL 185
>gi|224126375|ref|XP_002329538.1| predicted protein [Populus trichocarpa]
gi|222870247|gb|EEF07378.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + I +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EGEAKARELNVMFIETSAKAGFNIKPLFRKIAAAL 170
>gi|194762836|ref|XP_001963540.1| GF20451 [Drosophila ananassae]
gi|190629199|gb|EDV44616.1| GF20451 [Drosophila ananassae]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ D G++ +T+ + G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIGGLRVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW ++ + +++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
P D + I A+ +AK ++ LF +SA NINV+++ IT ++
Sbjct: 125 P-DRKVVITEDAQRFAKQMDIELFETSAKDNINVDEMFLSITRQVL 169
>gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, isoform CRA_a [Homo sapiens]
Length = 172
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAK 247
++P+ A+ YA+++ A + +SA IN+ ++ + I+ +
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISEQ 166
>gi|449461547|ref|XP_004148503.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
gi|449528471|ref|XP_004171228.1| PREDICTED: ras-related protein RABH1b-like [Cucumis sativus]
Length = 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|145496208|ref|XP_001434095.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833796|emb|CAI39360.1| rab_A46 [Paramecium tetraurelia]
gi|124401218|emb|CAK66698.1| unnamed protein product [Paramecium tetraurelia]
Length = 197
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ KI LLGD ++GK+S L++Y + + +P GL K + + +I+ IW+ G
Sbjct: 6 LTFKIILLGDSNVGKSSILKRYSENTFSEQQAPTIGLAFYKKVVERKNIKITLEIWDTAG 65
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDF 200
K + P+ +++ A+L FD+++R TL+ RW ++ K + + ++G K D+
Sbjct: 66 QEKFKKIAPIYYRNAQAVLICFDVSNRDTLEGAKRWLEEIDKYLDPDCVKFLVGNK-QDY 124
Query: 201 IQLPID 206
ID
Sbjct: 125 GSFEID 130
>gi|195325951|ref|XP_002029694.1| GM25038 [Drosophila sechellia]
gi|194118637|gb|EDW40680.1| GM25038 [Drosophila sechellia]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKT ++++ G+ E+ G+ G++ KT+ V G +I IW+ G
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTI-GVDFSMKTIAVEGKQIKLQIWDTAGQ 80
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFI 201
+ + + + +L ++D+T R + ++ +W ++ R+ + + II +G K D
Sbjct: 81 ERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEE 140
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL------FDIPW 253
Q +D + +AR + + LF +SA N+NV + + +L ++
Sbjct: 141 QREVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEE 195
Query: 254 TLERNLTIGE 263
E +T+G+
Sbjct: 196 VRENTITLGQ 205
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
+D + A Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --MDTRVVTADQGEALAKELGIPFIESSAKNDNNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>gi|440296793|gb|ELP89554.1| rab6, putative [Entamoeba invadens IP1]
Length = 210
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N + + I+L GD ++GKT F +++ E G ++M K L + G + +W+
Sbjct: 2 NNLLISIALCGDPYVGKTCFFQRFSAGEFNANTKTSIGCDVMCKKLTLDGKTYNVQLWDT 61
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW---YQQARKCNQTAIPIIIGTK 196
G + ++ ILF +D+T R TL+ V W + Q + + ++IG K
Sbjct: 62 AGQEVFRSTTTTYFRNRHCILFTYDITKRETLEHVEDWMKEFCQVQPDTTKTLTVLIGCK 121
Query: 197 FDDFIQLPIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D ++ Q I S + ++A F SA N N+ +I++F+ +L
Sbjct: 122 SD------LEEQRQITSEEGESFANTHQIPFFECSAKNNTNITEIVEFVVREL 168
>gi|194688230|gb|ACF78199.1| unknown [Zea mays]
gi|195637900|gb|ACG38418.1| ras-related protein RHN1 [Zea mays]
gi|413933484|gb|AFW68035.1| Ras protein RHN1 [Zea mays]
Length = 203
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V + + G +TL V + + IW+ G +
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD--DFI 201
P+ + + A + ++D+T+ + +W Q+ + + NQ I + G K D D
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDAR 132
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKLF 249
Q+P A +A+AYA+ LFF +SA INVN I I KL
Sbjct: 133 QVP-------AEEAKAYAQ--ENGLFFMETSAKTAINVNDIFYEIAKKLL 173
>gi|17737545|ref|NP_523970.1| Rab19, isoform A [Drosophila melanogaster]
gi|442630989|ref|NP_001261575.1| Rab19, isoform B [Drosophila melanogaster]
gi|194865952|ref|XP_001971685.1| GG14295 [Drosophila erecta]
gi|195491260|ref|XP_002093486.1| GE20724 [Drosophila yakuba]
gi|195588689|ref|XP_002084090.1| GD14074 [Drosophila simulans]
gi|2313047|dbj|BAA21712.1| rab-related protein 3 [Drosophila melanogaster]
gi|7295127|gb|AAF50452.1| Rab19, isoform A [Drosophila melanogaster]
gi|17945955|gb|AAL49022.1| RE48347p [Drosophila melanogaster]
gi|190653468|gb|EDV50711.1| GG14295 [Drosophila erecta]
gi|194179587|gb|EDW93198.1| GE20724 [Drosophila yakuba]
gi|194196099|gb|EDX09675.1| GD14074 [Drosophila simulans]
gi|220948860|gb|ACL86973.1| Rab-RP3-PA [synthetic construct]
gi|440215482|gb|AGB94270.1| Rab19, isoform B [Drosophila melanogaster]
Length = 219
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKT ++++ G+ E+ G+ G++ KT+ V G +I IW+ G
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTI-GVDFSMKTIAVEGKQIKLQIWDTAGQ 80
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFI 201
+ + + + +L ++D+T R + ++ +W ++ R+ + + II +G K D
Sbjct: 81 ERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEE 140
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
Q +D + +AR + + LF +SA N+NV + + +L
Sbjct: 141 QREVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANEL 184
>gi|226469998|emb|CAX70280.1| RAB18, member Ras oncogene family [Schistosoma japonicum]
Length = 204
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ +K+ LLGD +GKTS + ++V D Q + G + ++V G I ++IW+ G
Sbjct: 7 IRIKLILLGDSGVGKTSLIRRFVDDRFIQDEAATIGFDFKPYQMVVDGRTIQFNIWDTAG 66
Query: 142 DAKAQDHL-PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDD 199
+ +L P + + L+++D+ S +L V W +Q + C + +++G K D
Sbjct: 67 AERYSGYLTPSFYRHAHGALYVYDVNSVQSLSGVKYWAEQTEQFCGSQLLKMLVGNKID- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
+D + + +A+ L + +SA + NV + K+ P L
Sbjct: 126 -----LDSRLVSKKEGSEFARRLGSLFVETSAKTSENVRDAFVELVRKILQDPEFFSSTL 180
Query: 260 TIGEP 264
+ P
Sbjct: 181 SSQSP 185
>gi|118396092|ref|XP_001030389.1| Ras family protein [Tetrahymena thermophila]
gi|89284690|gb|EAR82726.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 339
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 54 VLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGS 113
+L S + P+ + + + D L KI ++GD +GKTSFL +Y+ +
Sbjct: 107 ILSSKAYKNKQISPNFEMASKKENHDYL--YKIIMVGDPRVGKTSFLIRYIKGVLPKSPM 164
Query: 114 PGEGLNMMDKTLLVRGAR--ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTL 171
P G+ + K +L+ G + IW+++G K + + S+ L FDLT +
Sbjct: 165 PTIGVEYLSKQVLLSGGEGIVKAQIWDMSGSEKYKSISVAHYRKSVGALLFFDLTELESF 224
Query: 172 KSVIRWYQQARKCNQTAIPI-IIGTKFD----DFIQLPIDLQWTIASQARAYAKALNATL 226
K+ +W Q+ + I I +IG K D D Q +D Q I +AK N
Sbjct: 225 KNTKKWLQEIENHTEEGIKIMLIGNKLDLIEEDPSQRKVDKQEVI-----EFAKKHNLIY 279
Query: 227 FFSSATYNINV 237
+SA NV
Sbjct: 280 EETSAVSGKNV 290
>gi|145478533|ref|XP_001425289.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833722|emb|CAI39334.1| rab_B46 [Paramecium tetraurelia]
gi|124392358|emb|CAK57891.1| unnamed protein product [Paramecium tetraurelia]
Length = 197
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ KI LLGD ++GKTS L++Y D + +P GL K + + +I+ IW+ G
Sbjct: 6 LTFKIILLGDSNVGKTSILKRYSEDTFSEQQAPTIGLAFYKKVVERKNIKITLEIWDTAG 65
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD 198
K + P+ +++ A+L FD++ TL+ RW ++ K + + ++G K D
Sbjct: 66 QEKFKKIAPIYYRNAQAVLICFDVSKSETLEGAKRWLEEIDKYLSSDCVKFLVGNKQD 123
>gi|307192561|gb|EFN75749.1| Ras-related protein Rab-43 [Harpegnathos saltator]
Length = 215
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
Query: 75 HLDADNLVA----------LKISLLGDCHIGKTSFLEKYVGDE--KEQGGSPGEGLNMMD 122
+ D DNL+ KI L+GDC GKT ++++ + QG + G +M
Sbjct: 3 YRDPDNLMVSTNDENFDYLFKIVLIGDCGTGKTCVVQRFKSGTYVERQGNTIGVDFSM-- 60
Query: 123 KTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR 182
KT+L+ G R+ IW+ G + + + + ++ ++D+T R T ++ RW ++ R
Sbjct: 61 KTVLIDGKRVKLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSTFLNLQRWMEEVR 120
Query: 183 KCNQTAI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNK 239
+ + + +++G K D DL+ +A A + L L +SA N N++
Sbjct: 121 RYTSSHVLLVLVGNKCD-----LEDLREVKKEEAEALCEYLPEVLHIVETSAKDNTNIDT 175
Query: 240 ILKFITAKL 248
I ++ ++L
Sbjct: 176 IFFYLASEL 184
>gi|414874079|tpg|DAA52636.1| TPA: ras protein RHN1 [Zea mays]
Length = 248
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 11/205 (5%)
Query: 50 PSPSVLESGLVPGTTVRPSLCHSHRHLDADN----LVALKISLLGDCHIGKTSFLEKYVG 105
P P GL+ + RP H + A N + K+ LLGD GK+S + ++V
Sbjct: 20 PQPGSFSCGLI-SSEARPQFRHQPSNSMAANFGNKIRNAKLVLLGDVGAGKSSLVLRFVK 78
Query: 106 DEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDL 165
+ + G +TL V + + IW+ G + P+ + + A + ++D+
Sbjct: 79 GQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGAAAAIVVYDI 138
Query: 166 TSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNA 224
T+ + +W Q+ + + N I + G K D +D + +A+ YA+
Sbjct: 139 TNPASFTRAKKWVQELQAQGNPNTIVALAGNKVD-----MLDARHVAVEEAKTYAQENGL 193
Query: 225 TLFFSSATYNINVNKILKFITAKLF 249
+SA INVN I I +L
Sbjct: 194 FFMETSAKTAINVNDIFYEIAKRLL 218
>gi|225453266|ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
Length = 208
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A A+ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|356505277|ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ E SP G++ KTL V G R+ +IW+ G
Sbjct: 13 LSFKILLIGDSGVGKSSLLVSFISSSVEDL-SPTIGVDFKIKTLTVGGKRLKLTIWDTAG 71
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T ++ W ++ NQ + I++G K D
Sbjct: 72 QERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKVD 131
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + + A AK L L SA NV + + + K+ + P LE
Sbjct: 132 RDTERAVSRE-----EGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEG 186
Query: 259 LT 260
T
Sbjct: 187 ST 188
>gi|388498202|gb|AFK37167.1| unknown [Medicago truncatula]
Length = 206
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRSERGSDVIVVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + + A ++ LN +SA N+ + + I A L
Sbjct: 126 ----LVEKRQVSTEEGEAKSRELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|356497064|ref|XP_003517384.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
Length = 206
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIAYDVASRQTFLNTSKWIEEVRSERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A ++ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSTEEGEAKSRELNVMFIEASAKAGFNIKALFRKIAAAL 170
>gi|195427457|ref|XP_002061793.1| GK17190 [Drosophila willistoni]
gi|194157878|gb|EDW72779.1| GK17190 [Drosophila willistoni]
Length = 219
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKT +E++ G+ E+ G+ G++ KT+ V G ++ IW+ G
Sbjct: 22 FKIVLIGDCGTGKTCIVERFKTGNFVERHGNTI-GVDFSMKTIAVEGKQVKLQIWDTAGQ 80
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFI 201
+ + + + +L ++D+T R + ++ +W ++ R+ + + II IG K D
Sbjct: 81 ERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILIGNKCDLDE 140
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ +D + +AR + + LF +SA N+NV + + +L
Sbjct: 141 EREVDFE-----EARQMCQYIPEILFVMETSAKSNMNVEDAFRCLATEL 184
>gi|355714952|gb|AES05173.1| RAB42, member RAS oncoprotein family [Mustela putorius furo]
Length = 219
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 21/168 (12%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGD-------EKEQGGSPGEGLNMMDKTLLVR-GARISYS 135
+I+LLGD +GKTS L ++V E E G+P G+ + L +R G R+
Sbjct: 10 FRIALLGDAAVGKTSLLRRFVAGAPGAPEPEHEPEGAPTVGVEFYSRKLQLRAGPRVKLQ 69
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ--ARKCNQTAIPIII 193
+W+ G + + ++ + +L +FD+T+R + + + W+Q+ A + I +++
Sbjct: 70 LWDTAGHERFRCITRSFYRNVVGVLLVFDVTNRKSFEHICDWHQEVVATQGPDKVIFLLV 129
Query: 194 GTKFDDFIQLPIDLQWT---IASQARAYAKALNATLFFSSATYNINVN 238
G K DLQ T A +A A +L +SA N NV+
Sbjct: 130 GHK--------SDLQSTRCVSAQEAEELAASLGMAFMETSAKNNYNVD 169
>gi|146184749|ref|XP_001030051.2| Ras family protein [Tetrahymena thermophila]
gi|146142675|gb|EAR82388.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777814|dbj|BAJ21303.1| Rab-family small GTPase RabX8 [Tetrahymena thermophila]
Length = 218
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGDA 143
KI ++G+ +GK++ ++KYV + + G N K L L + A ++ SIW+ + ++
Sbjct: 13 KILVIGEAGVGKSAIIQKYVNNFYPEMYKQSLGCNFFSKQLDLSKTASVTLSIWDCSSES 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRC---TLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
L S A+LF++D+T+R +++++++ Q N ++G K D F
Sbjct: 73 LKSKMLNTYIYGSDAVLFVYDITNRSSFDSIRNIMKLVQSVLIENNDVEYCVLGNKNDLF 132
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
Q+ ++ QA+ K LN + SA N+N+ K I K+ +P+ E
Sbjct: 133 NQIAVE-----EDQAKEMCKILNLPYYSVSAKMGSNLNECFKNIAYKVCKLPFPSEE 184
>gi|145545608|ref|XP_001458488.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831441|emb|CAI39306.1| rab_A68 [Paramecium tetraurelia]
gi|124426308|emb|CAK91091.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S + + D L L+I L+GD IGK+S L +Y E +Q P G++ K + G
Sbjct: 2 SETYFEFDYL--LRIILVGDTGIGKSSLLMRYTDQEFQQNLLPTIGIDFKTKIIEQSGKS 59
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIP 190
+ W+ G + + + + AI F++D+T R + K + W + + + I
Sbjct: 60 VKLQFWDTAGQERFRTISRNYYRGAHAIFFVYDITDRQSFKRIEYWMNEVEQNSPPDTIK 119
Query: 191 IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++IG K D + +D + + A++ F SSA N N+ + F+ AKL
Sbjct: 120 VLIGNKSDLNYKREVDF-----DEGKELAQSQGLEFFESSALENRNIENAINFV-AKL 171
>gi|123479525|ref|XP_001322920.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121905775|gb|EAY10697.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 149
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ L+GD +GKTS L +Y+ SP G K + G + IW+ +G+
Sbjct: 15 LKVVLIGDASVGKTSLLTRYITGSHTSNISPTLGAAFTTKLVESDGENVKLQIWDTSGEE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK--CNQTAIPIIIGTKFD 198
+ + P+ + + ++ ++DLT T S+ W + R+ QT + +++G K D
Sbjct: 75 RYRSMAPLYYRGAAVVVLVYDLTIESTYSSIDHWLEALRQHVNMQTTLILLVGNKLD 131
>gi|146184753|ref|XP_001030061.2| Ras family protein [Tetrahymena thermophila]
gi|146142676|gb|EAR82398.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777804|dbj|BAJ21298.1| Rab-family small GTPase Rab6D [Tetrahymena thermophila]
Length = 265
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V KI LGD H+GKT +E+++ D ++ P G++ + KTL + I S+W+ G
Sbjct: 19 VKHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAKTLHIDDKSIRLSLWDTAG 78
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDF 200
+ + +P +D+ + +FD+T++ + +V RW + + + P +++ K D
Sbjct: 79 QERFRSLIPSYLRDATCAVIVFDVTNKESFSNVDRWIKDYKDNRGSEAPCVLVANKID-- 136
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
++L ++Q + AK N + SA NV + K
Sbjct: 137 LKLTREVQL---ADLEKKAKENNMKFYEISAKTGENVANMFK 175
>gi|357482281|ref|XP_003611426.1| Ras-related protein Rab-6 [Medicago truncatula]
gi|355512761|gb|AES94384.1| Ras-related protein Rab-6 [Medicago truncatula]
Length = 226
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR T + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTTKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----DGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|149241639|pdb|2EQB|A Chain A, Crystal Structure Of The Rab Gtpase Sec4p, The Sec2p Gef
Domain, And Phosphate Complex
Length = 174
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 8 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 68 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 123
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + A Q A AK L SSA + NVN+I F AKL
Sbjct: 124 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 166
>gi|406695666|gb|EKC98968.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 8904]
Length = 222
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDE--KEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
LK+ L+G+ +GK+S L ++ D+ E+ + G++ K++ V G R SIW+ G
Sbjct: 13 LKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTAG 72
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDF 200
+ + + + ++ ++D++ R T +I+W+++ C + + II+G K D
Sbjct: 73 QERFRTLTSSYYRGAQGVILVYDVSQRNTFDELIKWFREIETYCAEDVVKIIVGNKVDKV 132
Query: 201 IQLPID--------LQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ + + + +A+A + SA + VN + + ++ + P
Sbjct: 133 TLVAMRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQELVRRILETP 192
Query: 253 --WT 254
WT
Sbjct: 193 SLWT 196
>gi|255571107|ref|XP_002526504.1| protein with unknown function [Ricinus communis]
gi|223534179|gb|EEF35895.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A A+ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|226470000|emb|CAX70281.1| RAB18, member Ras oncogene family [Schistosoma japonicum]
Length = 204
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ +K+ LLGD +GKTS + ++V D Q + G + ++V G I ++IW+ G
Sbjct: 7 IRIKLILLGDSGVGKTSLIRRFVDDRFIQDEAATIGFDFKPYQMVVDGRTIQFNIWDTAG 66
Query: 142 DAKAQDHL-PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDD 199
+ +L P + + L+++D+ S +L V W +Q + C + +++G K D
Sbjct: 67 AERYSGYLTPSFYRHAHGALYVYDVNSVQSLSGVKYWAEQTEQFCGSQLLKMLVGNKID- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
+D + + +A+ L + +SA + NV + K+ P L
Sbjct: 126 -----LDSRLVSKKEGSEFARRLGSLFVETSAKTSENVRDAFVELVRKILQDPEFFSSTL 180
Query: 260 TIGEP 264
+ P
Sbjct: 181 SSQSP 185
>gi|73535747|pdb|1Z08|A Chain A, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535748|pdb|1Z08|B Chain B, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535749|pdb|1Z08|C Chain C, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
gi|73535750|pdb|1Z08|D Chain D, Gppnhp-Bound Rab21 Q53g Mutant Gtpase
Length = 170
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ G + + K L + G R++ +IW+ G
Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQ 65
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 125
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + +Q +A +YA+++ A + +SA N + ++
Sbjct: 126 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELF 160
>gi|125981885|ref|XP_001354946.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
gi|54643258|gb|EAL32002.1| GA21885 [Drosophila pseudoobscura pseudoobscura]
Length = 200
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ D G++ +T+ + G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW ++ + +++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
P D + I A+ +AK ++ L+ +SA NINV+ + IT ++ +
Sbjct: 125 P-DCKVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVLN 170
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
++ + A Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>gi|225427294|ref|XP_002281823.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
gi|147782540|emb|CAN75036.1| hypothetical protein VITISV_014840 [Vitis vinifera]
Length = 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ LN +SA N+ + + I A L
Sbjct: 127 VEKRQVSIE-----EGEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|403265469|ref|XP_003924959.1| PREDICTED: ras-related protein Rab-12 [Saimiri boliviensis
boliviensis]
Length = 263
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 67 PSLCHSH-------RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLN 119
PS C SH R + AD L++ ++G +GKTS +E++ D + G++
Sbjct: 40 PSQCASHTAHAQWRRPVXAD--FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVD 97
Query: 120 MMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQ 179
KT+ +RG +I IW+ G + + + I+ ++D+T + T + +W +
Sbjct: 98 FKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMK 157
Query: 180 QARK-CNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINV 237
K ++ A +++G K D I Q Q +A+ + F +SA N NV
Sbjct: 158 MIDKYASEDAELLLVGNKLDCETDREITRQ-----QGEKFAQQITGMRFCEASAKDNFNV 212
Query: 238 NKI-LKFITAKLFDIPWTLERN 258
++I LK + L +P + RN
Sbjct: 213 DEIFLKLVDDILKKMPLDILRN 234
>gi|340504136|gb|EGR30614.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 230
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D + P G++ + KTL I +W+
Sbjct: 13 LQKYKLVFLGDQAVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWDTA 72
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +D+T+R + +V +W + R + Q I ++G K D
Sbjct: 73 GQERFRSLIPSYIRDSAVAVVCYDVTNRQSFDNVTKWIEDVRNERRQEVIICLVGNKTD- 131
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+Q +Q+ Q +K L+ F SA N+ ++ K I L
Sbjct: 132 -MQDKRQIQYADGLQK---SKELDVKYFEVSALSGENIPQLFKEIACML 176
>gi|340506579|gb|EGR32688.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 193
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARI-SYSIWEVTGD 142
LK+ +LGD +GKTS + ++V D+ EQ +G + + K +G +I IW+ G
Sbjct: 7 LKVVVLGDSGVGKTSIVNRFVLDKFEQRQQITQGASFVQKDFK-KGNKIFKLQIWDTAGQ 65
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFI 201
K + P+ +DS A + ++D+T++ + +++ +W + + I I+ +G K D
Sbjct: 66 EKYRTLGPLYYRDSEAAIVVYDITNKNSFQTLQQWIKDLKDYASENINIVLVGNKTD--- 122
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
I+ + A+ YAK ++A + SA N N+
Sbjct: 123 --LIEQEQVSFDNAKLYAKNISAKFQYVSAKENKNI 156
>gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLG+ +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEDSFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LLDAREVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRI 166
>gi|74831371|emb|CAI39291.1| rab_C69 [Paramecium tetraurelia]
Length = 221
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LGD +GKTS + +++ D P G++ + KTL V + +W+ G +
Sbjct: 14 KIVFLGDQAVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFI 201
+ +P +DS A + FD+T+ + +++ RW + ++ + I I+G K D +
Sbjct: 74 FRSLIPSYIRDSQAAIICFDITNEKSFQNLPRWIEDVKEERGDEVLIYILGNKIDLENER 133
Query: 202 QLPIDLQWTIASQARAYAK---ALNATLFFSSATYNINVNKILKFITAKLFDIP 252
Q+P QA AK L A SA INV + K ++ L P
Sbjct: 134 QIP-------TKQAEDKAKVFSELGAQFQEVSAKSAINVAEFFKKLSYDLLGNP 180
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor of
RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
++ + A Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>gi|409075969|gb|EKM76344.1| hypothetical protein AGABI1DRAFT_115896 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192906|gb|EKV42841.1| hypothetical protein AGABI2DRAFT_195613 [Agaricus bisporus var.
bisporus H97]
Length = 220
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEK---EQGGSPGEGLNMMDKTLLVRGARISY 134
A + +K+ L+G+ +GK+S L ++ DE+ E S G++ + V+G +I
Sbjct: 7 ASQPMNVKLLLIGNSSVGKSSLLLRF-SDEQWLPEDESSATIGVDFRVHKMEVKGKKIKL 65
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIII 193
SIW+ G + + + + I+ ++D+++R T +++ RWY + + + I I++
Sbjct: 66 SIWDTAGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPRWYSELETYVSSSVIKILV 125
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
G K D + A++ + +A+ + + +SA ++ V ++ + K+ + P
Sbjct: 126 GNKLDKEFSRQV-----TAAEGQQFAERMGSLFIEASAKTSVGVKEVFTEVVEKILETP 179
>gi|307777798|dbj|BAJ21295.1| Rab-family small GTPase Rab6A [Tetrahymena thermophila]
Length = 229
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D + P G++ + KTL I +W+
Sbjct: 13 LSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWDTA 72
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +D+T++ + +V +W + R + I ++G+K D
Sbjct: 73 GQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHDVIICLVGSKND- 131
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + + AK L+ F SA NV ++ + I L
Sbjct: 132 ----LVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANML 176
>gi|118383836|ref|XP_001025072.1| Ras family protein [Tetrahymena thermophila]
gi|89306839|gb|EAS04827.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 277
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D + P G++ + KTL I +W+
Sbjct: 13 LSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWDTA 72
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +D+T++ + +V +W + R + I ++G+K D
Sbjct: 73 GQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHDVIICLVGSKND- 131
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + + AK L+ F SA NV ++ + I L
Sbjct: 132 ----LVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANML 176
>gi|300120200|emb|CBK19754.2| unnamed protein product [Blastocystis hominis]
Length = 219
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 20 LEKYKLVFLGDPGVGKTSIITRFMYDTFDSSYQATIGIDFLSKTMYLDDRTVRLQLWDTA 79
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++DLT+R + ++ +W R + + +++G K D
Sbjct: 80 GQERFRSLIPSYIRDSSVAVIVYDLTNRTSFENTRKWLSDVRVERGDDVVIVLVGNKTD- 138
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + ++ A AK LN +SA N NV + + + L
Sbjct: 139 ----LSDSRQVSTNEGEALAKELNVLFIETSAKCNFNVTALFRKVATTL 183
>gi|384247403|gb|EIE20890.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 212
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 10 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 69
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++R + + RW ++ R + I +++G K D
Sbjct: 70 GQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWIEEVRTERGSDVIVVLVGNKTD- 128
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A A+ N +SA N+ + + I A L
Sbjct: 129 ----LVDKRQVSIEEGDAKAREFNVMFIETSAKAGFNIKALFRKIAAAL 173
>gi|170087436|ref|XP_001874941.1| GTP binding protein [Laccaria bicolor S238N-H82]
gi|164650141|gb|EDR14382.1| GTP binding protein [Laccaria bicolor S238N-H82]
Length = 213
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W R + I +++G K D +
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKADLSDKR 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ L+ +A A + LN +SA NV + K I L
Sbjct: 141 QVTLE-----EATAKSTQLNIMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|324519987|gb|ADY47533.1| Ras-related protein Rab-35 [Ascaris suum]
Length = 205
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 69 LCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR 128
+ +H D D+L K+ ++GD +GK+S L ++ + G++ +T+ +
Sbjct: 1 MSAAHGPRDYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTITIN 58
Query: 129 GARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTA 188
G R+ IW+ G + + + + ++ ++++TS + +V RW +
Sbjct: 59 GQRVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDANCDNV 118
Query: 189 IPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
I++G K DD + + + + AR +A ++ F +SA N+NV ++ IT +
Sbjct: 119 QKILVGNKADD-----PERRVVLEADARRFADTMHIPFFETSAKENVNVEEMFNCITGLV 173
Query: 249 FD 250
D
Sbjct: 174 LD 175
>gi|340723572|ref|XP_003400163.1| PREDICTED: ras-related protein RabJ-like [Bombus terrestris]
Length = 220
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ KI +LG +GKTS + +Y+G +P G + + L ++ I +W+ G
Sbjct: 3 IEAKIVVLGSQGVGKTSMIMRYIGKTYNSQVNPTIGASFFNCKLNIQDTGIMLRVWDTAG 62
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDF 200
+ + P+ +++ A + +FDLT T ++ RW + R+ +T + ++IG K D
Sbjct: 63 QERFRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEETLVLVVIGNKSD-- 120
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
I+ + A + R YA + A+ +S + + + L + T +RN T
Sbjct: 121 ---LIEKRQVNAEEGRLYATKIGASYHETSVLQGEGIENVFLTVARGLLGLSST-DRNST 176
>gi|348521996|ref|XP_003448512.1| PREDICTED: ras-related protein Rab-31-like [Oreochromis niloticus]
Length = 194
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + + KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ P+ + S A + ++D+T + +++ +W ++ ++ I + I +D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDL--- 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ +A+ +A+++ A +SA +NV ++ + I+ ++
Sbjct: 123 -GDIREVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQI 166
>gi|432911409|ref|XP_004078665.1| PREDICTED: ras-related protein Rab-31-like [Oryzias latipes]
Length = 194
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + + KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ P+ + S A + ++D+T + +++ +W ++ ++ I + I +D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDL--- 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ +A+ +A+++ A +SA +NV ++ + I+ ++
Sbjct: 123 -GDIREVPMKEAKEFAESIAAIFIETSARNAVNVEELFQKISKQI 166
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
++ + A Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>gi|299753222|ref|XP_001833137.2| ryh1 [Coprinopsis cinerea okayama7#130]
gi|298410200|gb|EAU88826.2| ryh1 [Coprinopsis cinerea okayama7#130]
Length = 214
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 22 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 81
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD--DFI 201
+ +P +DS + +FD+T+R + S +W R + I +++G K D D
Sbjct: 82 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIDDVRSERGNDVIIVLVGNKADLSDKR 141
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q+ ++ T A+Q LN +SA NV + K I L
Sbjct: 142 QVTVEEATTKATQ-------LNIMFMETSAKAGHNVKSLFKKIAMSL 181
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
++ + A Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>gi|225441147|ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
gi|297739985|emb|CBI30167.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ E +P G++ K L V G R+ +IW+ G
Sbjct: 13 LSFKILLIGDSAVGKSSLLVSFISSSVEDL-APTIGVDFKIKQLTVGGKRLKLTIWDTAG 71
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R + ++ W ++ NQ + +++G K D
Sbjct: 72 QERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKVD 131
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + I A AK F SA NV K + + K+ ++P LE
Sbjct: 132 RESERVVSREEGI-----ALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEG 186
Query: 259 LTIGE 263
T+G+
Sbjct: 187 STVGK 191
>gi|289741455|gb|ADD19475.1| GTP-binding protein H-ray [Glossina morsitans morsitans]
Length = 200
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ D G++ +T+++ G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGMRVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW + + +++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGESFANVRRWLDEIQNNCDVVNKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
P D + I A+ +A+ ++ LF +SA N+NV ++ IT ++
Sbjct: 125 P-DRKVVITEDAQRFARQMDIELFETSAKDNVNVEEMFLSITRQVL 169
>gi|402225252|gb|EJU05313.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D +Q G++ + KT+ + + +W+ G +
Sbjct: 20 KIVLLGDQSVGKTSLITRFMYDTFDQTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 79
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W R + I +++G K D L
Sbjct: 80 FRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGGDVIIVLVGNKAD----L 135
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
D Q T +A+ + L+ +SA NV + K I
Sbjct: 136 SNDRQVT-QEEAQQKSTELDIIYMETSAKAGHNVKTLFKKI 175
>gi|195438709|ref|XP_002067275.1| GK16335 [Drosophila willistoni]
gi|194163360|gb|EDW78261.1| GK16335 [Drosophila willistoni]
Length = 200
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ D G++ +T+++ G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVVIDGLRVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW ++ + +++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
P D + I A+ +A+ ++ L+ +SA NINV + IT ++ +
Sbjct: 125 P-DRKVVITEDAQRFARQMDIELYETSAKDNINVEDMFLSITRQVLN 170
>gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon nigroviridis]
Length = 194
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + + KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ P+ + S A + ++D+T + +++ +W ++ ++ I + I +D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDL--- 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ +A+ +A+++ A +SA +N+ ++ + I+ ++
Sbjct: 123 -GDIREVPTKEAKEFAESIAALFIETSARNAVNIEELFQKISKQI 166
>gi|440796995|gb|ELR18090.1| Raslike GTP-binding protein YPT1, putative [Acanthamoeba
castellanii str. Neff]
Length = 212
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K L+GD +GK++ L ++ D+ E G++ KT++V G R+ ++W+ G
Sbjct: 14 FKTLLVGDHGVGKSAMLARFTEDKFEDNAPATMGVDAKPKTVVVDGKRVKLNVWDTAGLE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + I+ +FD+ S + +++ W + R N +A+ I++G K D +Q
Sbjct: 74 RMGFLTSSYYRGAHGIIIVFDVASAGSYQNIANWVGEIERYANDSALKILVGNK-SDLVQ 132
Query: 203 LPIDLQWTIASQARAYAKA-LNATLFFSSATYNINVNKIL 241
+ + +A+AYAK L F +SA +NV +
Sbjct: 133 REVKPE-----EAQAYAKNDLGVDYFETSAKEGVNVEEAF 167
>gi|366990901|ref|XP_003675218.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
gi|342301082|emb|CCC68847.1| hypothetical protein NCAS_0B07630 [Naumovozyma castellii CBS 4309]
Length = 216
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR------ISY 134
++ K+ LLGD +GK+S + ++V D ++ G + +T+ ++ I +
Sbjct: 1 MLQFKLVLLGDSSVGKSSIVHRFVKDSFDELRESTIGAAFLSQTIKIKAEEQEEDVVIKF 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK--CNQTAIPII 192
IW+ G + + P+ +++ A L ++DLT + +L W ++ + ++ + +
Sbjct: 61 EIWDTAGQERYKSLAPMYYRNANAALVVYDLTQKDSLVKARSWVEELKNKVGDEDLVIFL 120
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+G K D + DL+ S+A+AYA+ N SA V ++ + I KL+
Sbjct: 121 VGNKL-DLCEGEEDLRAVDTSEAKAYAEEQNLLFTEVSAKTGQGVKEVFRSIGEKLY 176
>gi|62898834|dbj|BAD97271.1| RAB6A, member RAS oncogene family isoform a variant [Homo sapiens]
Length = 208
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I I ++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDIIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|226470002|emb|CAX70282.1| RAB18, member Ras oncogene family [Schistosoma japonicum]
gi|226470004|emb|CAX70283.1| RAB18, member Ras oncogene family [Schistosoma japonicum]
Length = 204
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ +K+ LLGD +GKTS + ++V D Q + G + ++V G I ++IW+ G
Sbjct: 7 IRIKLILLGDSGVGKTSLIRRFVDDRFIQDEAATIGFDFKPYQMVVDGRTIQFNIWDTAG 66
Query: 142 DAKAQDHL-PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDD 199
+ +L P + + L+++D+ S +L V W +Q + C + +++G K D
Sbjct: 67 AERYSGYLTPSFYRHAHGALYVYDVNSVQSLSGVKYWAEQTEQFCGSQLLKMLVGNKID- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
+D + + +A+ L + +SA + NV + K+ P L
Sbjct: 126 -----LDSRLVSKKEGSEFARRLGSLFVETSAKTSENVRDAFVELVRKILQDPEFFSSTL 180
Query: 260 TIGEP 264
+ P
Sbjct: 181 SSQLP 185
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 7/169 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GDC +GKT +Y DE G+ KT+ + G I IW+ +G+
Sbjct: 7 FKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDTSGEE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + S+ + +FD+T + +S+ W Q R+ ++ + ++G K D
Sbjct: 67 RYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKID---- 122
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
LP T+ +A +A+ +SA V + +T K+F+I
Sbjct: 123 LPTREVSTV--EAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEI 169
>gi|19923231|ref|NP_002860.2| ras-related protein Rab-6A isoform a [Homo sapiens]
gi|397487242|ref|XP_003814714.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Pan paniscus]
gi|4680635|gb|AAD27707.1|AF130122_1 small GTP binding protein RAB6 isoform [Homo sapiens]
gi|6684463|gb|AAF23593.1|AF119836_1 GTP-binding protein RAB6C [Homo sapiens]
gi|8163754|gb|AAF73841.1|AF198616_1 Rab GTPase RAB6A' [Homo sapiens]
gi|20379058|gb|AAM21089.1|AF498941_1 small GTP binding protein RAB6C [Homo sapiens]
gi|13177664|gb|AAH03617.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|16552748|dbj|BAB71371.1| unnamed protein product [Homo sapiens]
gi|46249771|gb|AAH68486.1| RAB6A protein [Homo sapiens]
gi|119595315|gb|EAW74909.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119595317|gb|EAW74911.1| RAB6A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 208
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|391331399|ref|XP_003740134.1| PREDICTED: ras-related protein Rab-21-like [Metaseiulus
occidentalis]
Length = 211
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLG+ +GKTS + +YV D+ + + KT+ + R+ +IW+ G
Sbjct: 8 KVVLLGEGRVGKTSLILRYVHDKFNDRLDRTVNASYLTKTVALGMKRVDLAIWDTAGQEM 67
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQL 203
P+ +DS + ++D+T + + V W ++ +K + ++IG K D +
Sbjct: 68 FHALGPLYYRDSQGAILVYDITDEDSFRKVKNWVKELKKMLGNEVVLVVIGNKSDLESER 127
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ L +A +YAK++ A F +SA N + ++
Sbjct: 128 SVPLH-----EAESYAKSVGAAHFLTSAKLNRGITEVF 160
>gi|256082187|ref|XP_002577342.1| rab 3 and [Schistosoma mansoni]
Length = 236
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Query: 67 PSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
++ HS D + K+ ++G+ +GKTSFL +Y D G++ KT+
Sbjct: 18 EAMSHSRDATDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTIF 77
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN- 185
+ R+ IW+ G + + + ++ + M+D+T+ + +V W Q + +
Sbjct: 78 RQDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIKTYSW 137
Query: 186 QTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
A +++G K D +D + + R A L F +SA N+NV +
Sbjct: 138 DNAQVVLVGNKCD-----LVDDRAVSVDRGRHLAHQLGLEFFEASAKENVNVKNVF 188
>gi|291190727|ref|NP_001167048.1| Ras-related protein Rab-31 [Salmo salar]
gi|223647850|gb|ACN10683.1| Ras-related protein Rab-31 [Salmo salar]
Length = 194
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + + KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ P+ + S A + ++D+T + +++ +W ++ ++ I + I +D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDL--- 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ +A+ +A+++ A +SA +NV ++ + I+ ++
Sbjct: 123 -GDIREVPMKEAKDFAESIAAIFMETSARNAVNVEELFQKISKQI 166
>gi|195481939|ref|XP_002101841.1| GE17848 [Drosophila yakuba]
gi|194189365|gb|EDX02949.1| GE17848 [Drosophila yakuba]
Length = 219
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI +LGDC +GK+ L ++ D G++ +++ V G + +W+ G+
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTGKYLCTVGVDFKVRSVEVAGQVVKLQVWDTAGEE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + LP + + IL ++D TS T +S+ W ++ R+C +++G K DD
Sbjct: 68 RFKSLLPAYYRGAHGILLVYDTTSANTFRSIDGWLEEIHRRCPDRVNVLLVGNKCDDLEH 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ L+ QA YA SA NVN + +F+
Sbjct: 128 RQVSLE-----QALHYADRRALGFCEVSAKSGANVNYAFAALAVDIFN 170
>gi|300797426|ref|NP_001180044.1| ras-related protein Rab-6A [Bos taurus]
gi|386782131|ref|NP_001248232.1| ras-related protein Rab-6A [Macaca mulatta]
gi|291384294|ref|XP_002708750.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 1
[Oryctolagus cuniculus]
gi|301759053|ref|XP_002915363.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Ailuropoda
melanoleuca]
gi|332211363|ref|XP_003254789.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Nomascus
leucogenys]
gi|426245109|ref|XP_004016356.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479822|tpg|DAA21937.1| TPA: RAB6A, member RAS oncogene family-like isoform 1 [Bos taurus]
gi|380788415|gb|AFE66083.1| ras-related protein Rab-6A isoform a [Macaca mulatta]
Length = 208
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|268572557|ref|XP_002641352.1| C. briggsae CBR-RAB-35 protein [Caenorhabditis briggsae]
Length = 209
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + + G++ +T+ + G R+ I
Sbjct: 6 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQI 63
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+T+ + +V RW Q+ + +++G K
Sbjct: 64 WDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVGNK 123
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
++ D + + S AR YA+++N F +SA + NV + IT+
Sbjct: 124 CEE-----TDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFTCITS 168
>gi|213972608|ref|NP_445818.1| ras-related protein Rab-6A [Rattus norvegicus]
gi|254750706|ref|NP_001157135.1| ras-related protein Rab-6A isoform 1 [Mus musculus]
gi|17512290|gb|AAH19118.1| Rab6 protein [Mus musculus]
gi|74150583|dbj|BAE32315.1| unnamed protein product [Mus musculus]
gi|148684517|gb|EDL16464.1| RAB6, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149068776|gb|EDM18328.1| rCG39700, isoform CRA_d [Rattus norvegicus]
Length = 208
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S + D D + LK+ L+GD +GKT+ L ++ E + P G+ K L + G
Sbjct: 3 SRQRSDDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDL 62
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP 190
I IW+ G + + + ++ L ++D+T + +S+ RW + R+ + +
Sbjct: 63 IKCQIWDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVV 122
Query: 191 IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+++G K D Q + +Q Q + A+ +SA NV + + A++
Sbjct: 123 MLVGNKTDLVDQRDVSMQ-----QGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHG 177
Query: 251 I 251
I
Sbjct: 178 I 178
>gi|62858707|ref|NP_001016319.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266851|emb|CAJ82566.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624296|gb|AAI70902.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|213624300|gb|AAI70908.1| RAB21, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 221
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + T ER
Sbjct: 137 ERHVSVQ-----EAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQTDER 187
>gi|395814866|ref|XP_003780960.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Otolemur
garnettii]
Length = 208
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|17535871|ref|NP_495854.1| Protein RAB-21 [Caenorhabditis elegans]
gi|3879231|emb|CAA91296.1| Protein RAB-21 [Caenorhabditis elegans]
Length = 207
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI LLG+ +GK+S + ++V ++ + +KT+ V + IW+ G
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
K P+ + S +L +FD+T R + + V W + + C TA +I+G K D
Sbjct: 73 KYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKID---- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
L + Q T A AYA++ A +SA N+ ++ + +TAK+ + T
Sbjct: 129 LEEERQVT-RQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRT 179
>gi|343098455|ref|NP_001230202.1| ras-related protein Rab-6A [Sus scrofa]
Length = 208
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 6/179 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 184
>gi|351723071|ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
gi|255633056|gb|ACU16883.1| unknown [Glycine max]
Length = 194
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ E SP G++ KTL V G R+ +IW+ G
Sbjct: 13 LSFKILLIGDSGVGKSSLLVSFISSSVEDL-SPTIGVDFKIKTLTVGGKRLKLTIWDTAG 71
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T ++ W ++ NQ + I++G K D
Sbjct: 72 QERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKVD 131
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + + A AK L L SA NV + + + K+ + P LE +
Sbjct: 132 RDTERAVSRE-----EGLALAKDLGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEED 186
>gi|399163161|gb|AFP33156.1| rab-21, partial [Caenorhabditis elegans]
Length = 206
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI LLG+ +GK+S + ++V ++ + +KT+ V + IW+ G
Sbjct: 12 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
K P+ + S +L +FD+T R + + V W + + C TA +I+G K D
Sbjct: 72 KYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKID---- 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
L + Q T A AYA++ A +SA N+ ++ + +TAK+ + T
Sbjct: 128 LEEERQVT-RQDAEAYAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRT 178
>gi|401828567|ref|XP_003887997.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
gi|392999005|gb|AFM99016.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
Length = 203
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI +LG+ +GKT L KY D+ +Q G++ + K +++ G + +IW+ G +
Sbjct: 11 KIIVLGESDVGKTCLLHKYKEDDFKQSLMTTIGVDTVSKNIVLNGKNVMLNIWDTAGQER 70
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+++ IL +FD++ T V RW+ + R+ ++G K D ++
Sbjct: 71 FFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFLVGNKRD---KVD 127
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
+ + S+ ++ A + A + +SA NVN I +
Sbjct: 128 STTYYEMESRFKSKADEMKAQYYTTSAKTGENVNNIFE 165
>gi|145490291|ref|XP_001431146.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831437|emb|CAI39305.1| rab_C42 [Paramecium tetraurelia]
gi|124398249|emb|CAK63748.1| unnamed protein product [Paramecium tetraurelia]
Length = 400
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 67 PSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLL 126
P L + D LKI LLGD IGK+S +KY + +P G++ DK +
Sbjct: 199 PMLNKKTKQFDQ----ILKIILLGDNGIGKSSLYQKYCF-QTIISTTPTIGVDCYDKIVE 253
Query: 127 VRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CN 185
+G ++ +W+ +G + C ++ ++ F++++TS+ T + +I+W A+K +
Sbjct: 254 FQGKKLKIILWDTSGQEAFMPIVQPHCNNANSVFFIYNITSKDTFQGIIKWINLAKKSAS 313
Query: 186 QTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYN 234
+ I ++IG K D L Q + +++ + A+ L + +SA Y+
Sbjct: 314 RNTINVLIGNKID----LNSSRQVS-STEGQQLAQDLKLKFYETSARYD 357
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE---GLNMMDKTLLVRGARISYSIWEVT 140
+KI LGD GKT+ L KYV + + P + G++ K++ +G I IW+
Sbjct: 13 IKILFLGDTDTGKTTLLLKYVTGKFD----PSQTTIGVDFKYKSVGYQGKMIRIQIWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD 198
G + + K++ F +D+T++ + V+R + + I I+IG K D
Sbjct: 69 GQERYRSINQTQFKNANCFFFFYDITNQKPFEEVLRLLNDVEQLASPDVIKILIGNKID 127
>gi|341881170|gb|EGT37105.1| hypothetical protein CAEBREN_13223 [Caenorhabditis brenneri]
Length = 210
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI LLG+ +GK+S + ++V ++ + + KT+ + + IW+ G
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSSRHLSTIQASFVSKTIHIDDCKAELHIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
K P+ + S +L +FD+T R + + V W + + C +TA +I+G K D
Sbjct: 73 KYHALGPIYYRGSNGVLLVFDITDRRSFERVKNWVLEIKTCLGKTAEILIVGNKTD---- 128
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++ + I+ Q A YA + NA +SA NI + + + +TAK+ +
Sbjct: 129 --LEDERLISRQDAEVYADSENALYMETSAQDNIGIPEAFEALTAKMIE 175
>gi|440299778|gb|ELP92315.1| GTP-binding protein ryH1, putative [Entamoeba invadens IP1]
Length = 184
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
++ KI LGD +GKT + +++ G+ N + + G I IW+
Sbjct: 4 MMKHKIVFLGDSSVGKTCIIGRFM---------TGDFNNGYESLVCKNGKTIQLQIWDTA 54
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P +DS A + ++D+ R T ++V RW + ++ + I + ++G K
Sbjct: 55 GQERYRSLIPSYIRDSAAAVVVYDVNDRQTFENVSRWVKDLKELEKGNIFVYLVGNK--- 111
Query: 200 FIQLPIDLQWTIASQARAYAKA--LNATLFFSSATYNINVNKILKFITAKLFDIP 252
ID++ Q A AK L+ F +SA NIN++++ I L +P
Sbjct: 112 -----IDMETREVQQKEALAKGEELHCNCFETSAKTNINISELFASIAENLCTLP 161
>gi|401414254|ref|XP_003871625.1| small GTP binding protein rab6-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487843|emb|CBZ23087.1| small GTP binding protein rab6-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 274
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR-ISYSIWEVTGDA 143
K+ LLGD +GKTS + +++ D +Q P G++ KT+ + R + +W+ G
Sbjct: 26 KLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRLHLWDTAGQE 85
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ +P ++S A + ++D+TSR T S +W + R + + +++G K D
Sbjct: 86 RFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLVGNKVDQ--- 142
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A +A A N SA + N+ + + + A L
Sbjct: 143 -ASERREVSAEEAMKKATECNVLFTEVSAKHGTNIKHMFRQVAAAL 187
>gi|410045696|ref|XP_003313253.2| PREDICTED: ras-related protein Rab-6A [Pan troglodytes]
Length = 315
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Query: 37 IRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSH------RHLDADNL--------- 81
+R R LP P P L L+P P LC +H R NL
Sbjct: 59 LRSRSLP-----VPRPPFLSPTLIPSLFPVPQLCEAHSGKPHSRERALFNLGQGGWDLGV 113
Query: 82 -----VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
+AL+ + + +GKTS + +++ D + G++ + KT+ + I +
Sbjct: 114 VFPRGLALRSADVVGRSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQL 173
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGT 195
W+ G + + +P +DS A + ++D+T+ + + +W R + I +++G
Sbjct: 174 WDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGN 233
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
K D L Q +I R AK LN +SA NV ++ + + A L + T
Sbjct: 234 KTD----LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQ 288
Query: 256 ERN 258
+R+
Sbjct: 289 DRS 291
>gi|332018505|gb|EGI59095.1| Ras-related protein Rab-43 [Acromyrmex echinatior]
Length = 212
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKT ++++ G E+ G+ G++ KT+L+ G R+ IW+ G
Sbjct: 14 FKIVLIGDCGTGKTCVVQRFRSGTFVERHGNTI-GVDFTMKTVLIDGKRVKLQIWDTAGQ 72
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI-PIIIGTKFDDFI 201
+ + + + ++ ++D+T R T S+ RW ++ R+ + + + +++G K D
Sbjct: 73 ERFRTITQSYYRSANGVIVVYDITKRSTFLSLQRWVEEVRRYSSSHVLLVLVGNKCD--- 129
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
DL+ +A A + L L +SA N N++ I ++ ++L
Sbjct: 130 --LEDLREVKEIEAEALCQYLPEVLHVVETSAKDNTNIDSIFFYLASEL 176
>gi|148922827|ref|NP_001092211.1| RAB39B, member RAS oncogene family [Danio rerio]
gi|148744698|gb|AAI42805.1| Zgc:165464 protein [Danio rerio]
Length = 213
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ--TAIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++AR Q + + I+
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFIL 120
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D Q + Q +A A A +SA INV K +T +F++
Sbjct: 121 VGHKCDLEQQRQVSQQ-----EAEKLAAAYGMRYVETSARDAINVEKAFTELTRDIFEL 174
>gi|125951222|ref|XP_697248.2| PREDICTED: ras-related protein Rab-31-like [Danio rerio]
Length = 194
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + + KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPSGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ P+ + S A + ++D+T + +++ +W ++ ++ I + I +D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDL--- 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ +A+ +A+++ A +SA +N+ ++ + I+ ++
Sbjct: 123 -GDIREVPTKEAKEFAESIAAIFMETSARNAVNIEELFQKISRQI 166
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G +I +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKIKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFSNIRQWFKTVNEHANDDAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + Q A AK L SSA + NVN+I F AKL
Sbjct: 137 --MDTRTVTYEQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 179
>gi|308483958|ref|XP_003104180.1| CRE-RAB-35 protein [Caenorhabditis remanei]
gi|308258488|gb|EFP02441.1| CRE-RAB-35 protein [Caenorhabditis remanei]
Length = 209
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + + G++ +T+ + G R+ I
Sbjct: 6 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQI 63
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+T+ + +V RW Q+ + +++G K
Sbjct: 64 WDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVGNK 123
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
++ D + + S AR YA+++N F +SA + NV + IT+
Sbjct: 124 CEE-----SDRRVVLESDARNYAQSMNIAFFETSAKEDKNVEPMFTCITS 168
>gi|123495541|ref|XP_001326768.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736326|gb|AAX97492.1| small Rab GTPase RabX17 [Trichomonas vaginalis]
gi|121909687|gb|EAY14545.1| Ras family protein [Trichomonas vaginalis G3]
Length = 211
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V LK LLG+ +GKTS +YV + + + + +K L V +++ + IW+
Sbjct: 11 NSVTLKAVLLGESKVGKTSLCSRYVSGDWDSNTAATISASCFNKDLTVDDSKVKFYIWDT 70
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFD 198
G + + P+ + + + +FDLT+ T+ W + R IP+I IG K D
Sbjct: 71 AGQEQFRSISPIYYRSAHVAIIVFDLTAIPTIDVANFWVNELRNNGPAGIPLIAIGNKSD 130
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
+ L+ + ARA+A + A F SA NV++
Sbjct: 131 LRM-----LRMIQNADARAFADNIGALYFECSALSGDNVDE 166
>gi|66821415|ref|XP_644189.1| GTP-binding nuclear protein Ran [Dictyostelium discoideum AX4]
gi|60472411|gb|EAL70364.1| GTP-binding nuclear protein Ran [Dictyostelium discoideum AX4]
Length = 754
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GKT+FL++++ E ++ P G+ + + L +++ IW+ GD
Sbjct: 53 IKLILVGDSGVGKTTFLKRHIIGEFQKSHIPTVGVELSNLILYTNIGNVNFDIWDTCGDE 112
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFD 198
K + + S + MFD++SR + ++V W+ + K IPII +G K D
Sbjct: 113 KFEVFRHLYYVGSQCAIIMFDVSSRVSYRNVPSWFNELTKELGNNIPIILVGNKVD 168
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 15/169 (8%)
Query: 36 PIRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIG 95
P + +T SPS + GL + +PSL + DN +K+ L+GD +G
Sbjct: 469 PFDFGTPKTTTAASPSSAQFSLGLS-SSKNKPSLPVVKKF---DNTKEIKLVLIGDGGVG 524
Query: 96 KTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKD 155
K++++ + + E E G ++ +++SIW++ A LP A +D
Sbjct: 525 KSTYINRLLTGEFETQYVATFGCSVHKFNFKTTIGDVNFSIWDM-----AFTRLPGAMRD 579
Query: 156 SIAI-----LFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFD 198
+ MFD+ SR + +SV W+ + + +P +++G K +
Sbjct: 580 DYMTGAECAIIMFDVCSRESYRSVNDWFNELLRITGKVVPMVLVGNKVE 628
>gi|390597749|gb|EIN07148.1| GTP binding protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 214
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W R + I +++G K D L
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKAD----L 136
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q T+ +A ++ +N +SA NV + K I L
Sbjct: 137 SDKRQVTL-EEATTKSQEMNVMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|307777800|dbj|BAJ21296.1| Rab-family small GTPase Rab6C [Tetrahymena thermophila]
Length = 224
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ +GD +GKTS + +++ D + P G++ + KTL + I +W+ G +
Sbjct: 14 KLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFIQL 203
+ +P +DS A + ++D+T++ + SV +W R+ + I+ + K D L
Sbjct: 74 FRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDYVREERGDGVLIVLLANKLD----L 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
P D + + +AK N SA N+N + K
Sbjct: 130 P-DQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFK 167
>gi|229594060|ref|XP_001025689.3| Ras family protein [Tetrahymena thermophila]
gi|225567120|gb|EAS05444.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 225
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ +GD +GKTS + +++ D + P G++ + KTL + I +W+ G +
Sbjct: 14 KLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTIRLQLWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFIQL 203
+ +P +DS A + ++D+T++ + SV +W R+ + I+ + K D L
Sbjct: 74 FRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDYVREERGDGVLIVLLANKLD----L 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
P D + + +AK N SA N+N + K
Sbjct: 130 P-DQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFK 167
>gi|393245652|gb|EJD53162.1| GTP binding protein [Auricularia delicata TFB-10046 SS5]
Length = 214
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W R + I +++G K D
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRASFLSTTKWIDDVRSERGSDVIIVLVGNKAD----- 135
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + +A A +N +SA NV + K I L
Sbjct: 136 LSDKRQVTHEEATNKATEMNIMFMETSAKAGHNVKSLFKKIAMSL 180
>gi|410919323|ref|XP_003973134.1| PREDICTED: ras-related protein Rab-22A-like [Takifugu rubripes]
Length = 194
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLG+ +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGETGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ + S A + ++D+T + +++ W ++ R+ I + I G K D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCD- 121
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 122 ----LSDAREVSEKDAKDYADSIHAIFVETSAKNAININEVFIEISKRI 166
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LKI L+GD +GKT+ L ++ D+ G+ KTL + G + IW+ G
Sbjct: 10 LKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD 198
+ + + +I L ++D+T+ T S+ RW Q+ R+ + + +++G K D
Sbjct: 70 RYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSD 125
>gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6 [Oryza sativa Japonica Group]
gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa Japonica Group]
Length = 208
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + AK L +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|410923777|ref|XP_003975358.1| PREDICTED: ras-related protein Rab-31-like [Takifugu rubripes]
Length = 194
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + + KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVPCGHELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ P+ + S A + ++D+T + +++ +W ++ ++ I + I +D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKLDSFQTLKKWVKELKEHGPEDIVVAIAGNKNDL--- 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ +A+ +A+++ A +SA +N+ ++ + I+ ++
Sbjct: 123 -GDIREVPMKEAKEFAESIAAIFIETSARNAVNIEELFQKISKQI 166
>gi|417397129|gb|JAA45598.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 208
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFSSLIPSYIRDSTAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V + L+GD ++GKT+ L ++ DE G+ K + V + I IW+ G
Sbjct: 16 VYFVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAG 75
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDF 200
+ + + ++ L ++D+TSR + ++V W + R+ + + ++IG K D
Sbjct: 76 QERYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLA 135
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
Q I +ARAYA+ N +SA +++ + +L D
Sbjct: 136 NQRSIS-----TDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRLGD 180
>gi|343473101|emb|CCD14917.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 231
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
++ KI LLGD +GKTS + +++ D +Q G++ KTL V + +W+
Sbjct: 26 HMAKYKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTLHVDNRAVWLHVWDT 85
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G + + +P ++S A + ++D+TSR + S W + RK + + + ++G K D
Sbjct: 86 AGQERFRSLIPSYIRNSAAAIIVYDITSRVSFLSTFDWVDEVRKVRGSDVVVALVGNKCD 145
>gi|18414255|ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
gi|297810433|ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75098916|sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName:
Full=Ras-related protein Rab18B; Short=AtRab18B
gi|2723477|dbj|BAA24074.1| GTP-binding protein [Arabidopsis thaliana]
gi|7378638|emb|CAB83314.1| AtRab GTP-binding protein [Arabidopsis thaliana]
gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding protein [Arabidopsis thaliana]
gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis thaliana]
gi|297318937|gb|EFH49359.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis thaliana]
Length = 210
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ E +P G++ K L V G R+ +IW+ G
Sbjct: 12 LSFKILLIGDSGVGKSSLLVSFISSSVEDL-APTIGVDFKIKQLTVGGKRLKLTIWDTAG 70
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T +++ W ++ NQ + +++G K D
Sbjct: 71 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVD 130
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + I A AK LN SA NV + + + K+ ++P LE
Sbjct: 131 RESERGVSREEGI-----ALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEG 185
>gi|294657272|ref|XP_459580.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
gi|199432566|emb|CAG87807.2| DEHA2E05918p [Debaryomyces hansenii CBS767]
Length = 204
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 76 LDADNLV-ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR-IS 133
+D N++ KI LGD +GKTS + +++ D + + G++ + KT+ + + I
Sbjct: 1 MDKSNILRKYKIVFLGDQSVGKTSLITRFMYDTFDDQYAATIGIDFLSKTMYLEDNKTIR 60
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPII 192
+W+ G + + +P +DS + +D+T++ + +++ +W Q + + I ++
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSHVAVICYDITNKKSFENLNKWIQDVKLERGDDVIIVV 120
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATY-NINVNKILKFITAKLFDI 251
+G K D L Q T+ + AY K++N ++T N NV ++ K I + L D+
Sbjct: 121 VGNKSD----LNNKRQVTM-EECEAYLKSINGKFCIETSTKANHNVKQLFKKIASSLPDV 175
Query: 252 PWTLERNLTIGEPI 265
+ + T E +
Sbjct: 176 EKSTKDETTQPETV 189
>gi|156357542|ref|XP_001624276.1| predicted protein [Nematostella vectensis]
gi|156211042|gb|EDO32176.1| predicted protein [Nematostella vectensis]
Length = 224
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRG-ARISYSIWEVTGD 142
+I L+GD +GK+S L ++ + + P G++ + L ++G RI IW+ G
Sbjct: 9 FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQ 68
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTA--IPIIIGTKFDDF 200
+ + ++++ L ++D+T+R + +V+ WY++A++C + A + +++G K D
Sbjct: 69 ERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKE 128
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+ + + + +A+A N +SA N+ + + +++
Sbjct: 129 SKRVVSTE-----EGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEVY 172
>gi|356548355|ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ + E +P G++ K L V G R+ +IW+ G
Sbjct: 13 LSFKILLIGDSAVGKSSLLVSFISNSAEDI-APTIGVDFKIKMLTVGGKRLKLTIWDTAG 71
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSV-IRWYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T ++ + W ++ NQ + +++G K D
Sbjct: 72 QERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKVD 131
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + + A A+ L F SA NV + + + K+ ++P LE
Sbjct: 132 RDSERVVSKE-----EGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEG 186
Query: 259 LT 260
T
Sbjct: 187 ST 188
>gi|389632835|ref|XP_003714070.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
gi|351646403|gb|EHA54263.1| GTP-binding protein ypt5 [Magnaporthe oryzae 70-15]
Length = 221
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARI 132
R + + K+ LLG+ +GK+S + ++V D+ + G + +T+ L +
Sbjct: 10 RGMGNNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTV 69
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPI 191
+ IW+ G + + P+ +++ + ++D+T +L W ++ R+ N+ I
Sbjct: 70 KFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIA 129
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ G K D + P D + S+A AYA+ F +SA NV + I KL
Sbjct: 130 LAGNKLDLVTEQP-DKRAVPTSEAEAYAREAGLLFFETSAKTAENVRDLFTAIAKKL 185
>gi|390473801|ref|XP_002757097.2| PREDICTED: ras-related protein Rab-31-like [Callithrix jacchus]
Length = 200
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 86 ISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKA 145
I LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G +
Sbjct: 14 ICLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERF 73
Query: 146 QDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DFIQ 202
P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D +
Sbjct: 74 HSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE 133
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 134 VPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 172
>gi|320166564|gb|EFW43463.1| RAB6A [Capsaspora owczarzaki ATCC 30864]
Length = 223
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+ G
Sbjct: 26 FKLVFLGEQSVGKTSLITRFMYDSFDSTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 85
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD--DF 200
+ + +P +DS + ++D+T+R + + +W R + I +++G K D D
Sbjct: 86 RFRSLIPSYIRDSSVAVVVYDITNRNSFQQTTKWIDDVRAERGNDVIIMLVGNKTDLGDK 145
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q+ I+ + A +K LN +SA NV ++ + + A L
Sbjct: 146 RQVSIE-------EGEAKSKELNVMFIETSAKAGYNVKQLFRRVAAAL 186
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R +Q + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE-RNL 259
+P D +ARA+A+ N + +SA + NV + I +++ I + RN
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRND 184
Query: 260 TIGEP 264
T +P
Sbjct: 185 TDNDP 189
>gi|403272140|ref|XP_003927941.1| PREDICTED: ras-related protein Rab-21 [Saimiri boliviensis
boliviensis]
Length = 338
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 75 HLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISY 134
H+ + K+ LLG+ +GKTS + +Y ++ + + K L + G R++
Sbjct: 124 HVTRGVTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNL 183
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-II 193
+IW+ G + P+ +DS + ++D+T + + V W ++ RK I + I+
Sbjct: 184 AIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIV 243
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPW 253
G K D + + +Q +A +YA+++ A + +SA N + ++ + ++ +
Sbjct: 244 GNKIDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQ 298
Query: 254 TLER 257
ER
Sbjct: 299 VDER 302
>gi|440294253|gb|ELP87270.1| rab11, putative [Entamoeba invadens IP1]
Length = 207
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 6/177 (3%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
++ ++ KI ++GD +GKT ++YV + G P G+N+ L + G I +W+
Sbjct: 2 ESELSFKIVVVGDSGVGKTCLCQRYVNNGFTGGDKPTIGVNLSYSMLKISGTMIKVELWD 61
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIP---IIIG 194
G K Q + + SI + ++DLT+R + V W ++ ++ T IP ++IG
Sbjct: 62 TAGLEKFQTIPSLFYRGSIGAIVVYDLTNRESFSHVQSWIEKYQELGGMTNIPRSILLIG 121
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
K D + I+ Q K LN F +SA NV + ++ I
Sbjct: 122 NKSDVLQEREIESQE--GEDLAKSMKTLNTYFFETSAKSGKNVTESFNQFIQNIYQI 176
>gi|193603506|ref|XP_001944237.1| PREDICTED: ras-related protein Rab-5B-like isoform 1 [Acyrthosiphon
pisum]
Length = 204
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ +G +GK+S + +Y+ + ++ G + M + +R +I+ +W+ G +
Sbjct: 7 KLVFMGSQGVGKSSIITRYIKGDFKKECEATIGASFMYAKVTLRDYQITLKVWDTAGQER 66
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT-AIPIIIGTKFDDFIQL 203
+ +P+ ++S A+ +FD++ R + V W + RK T + ++G K D
Sbjct: 67 FRSLVPMYYRNSDAVAIIFDVSDRDSFNQVKNWINEVRKNTDTPVVYYVVGNKTD----- 121
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
ID + + +A +A ++NA + +S N + + I L +I
Sbjct: 122 LIDTRVIMYEEAEEFANSVNARYWETSVYSNTGIQDLFTNIGRNLIEI 169
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 72 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 131
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 132 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 191
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 192 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 235
>gi|340506147|gb|EGR32356.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 248
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 61 PGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNM 120
+ + S+ +S R + KI LGD ++GKT +E+++ D ++ P G++
Sbjct: 6 ESSNLTSSISNSQR-------IKHKIIFLGDQYVGKTCIIERFMYDVFDEKSHPTVGVDF 58
Query: 121 MDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ 180
+ K++ + I +W+ G + + +P +D+ + +FD+T++ + ++ RW +
Sbjct: 59 LAKSIKLDDKNIRLQLWDTAGQERFRSLIPSYLRDATCAIIVFDVTNKESFNNIERWLKD 118
Query: 181 ARKC-NQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
R A ++IG K D I Q QA K LN F SA NV
Sbjct: 119 YRDNRGNDASCVLIGNKIDMKQIREISQQ-----QAEEKGKMLNMLYFDISAKTGENVQN 173
Query: 240 IL 241
+
Sbjct: 174 MF 175
>gi|12084563|pdb|1G16|A Chain A, Crystal Structure Of Sec4-Gdp
gi|12084564|pdb|1G16|B Chain B, Crystal Structure Of Sec4-Gdp
gi|12084565|pdb|1G16|C Chain C, Crystal Structure Of Sec4-Gdp
gi|12084566|pdb|1G16|D Chain D, Crystal Structure Of Sec4-Gdp
Length = 170
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ IW+ G +
Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQER 64
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + + I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 65 FRTITTAYYRGAXGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD----- 119
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A Q A AK L SSA + NVN+I F AKL
Sbjct: 120 -XETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 162
>gi|431892057|gb|ELK02504.1| Ras-related protein Rab-21 [Pteropus alecto]
Length = 227
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 21 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 80
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 81 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 140
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 141 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 191
>gi|123468958|ref|XP_001317694.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121900434|gb|EAY05471.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 200
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
++K ++GD +GKT L +++ D ++ P G+ M K + RI +W+ G
Sbjct: 7 SVKTIVVGDSGVGKTCLLLRFIRDAFDETSQPTLGVEFMTKIVQTANHRIELQLWDTAGQ 66
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI-PIIIGTKFDDFI 201
+ + S +FDLTSR + +++ RW + + I I+IG K D
Sbjct: 67 ELFRSVTRGYYRGSAGAFLVFDLTSRVSFENISRWLHDITEVAKNDIVKILIGNKND--- 123
Query: 202 QLPIDLQWTI-ASQARAYAKALNATLFFSSATYNINV 237
+D Q I A +A+ +AKA F +SA NV
Sbjct: 124 ---LDAQREITAEEAQDFAKANGMVYFETSAKTGSNV 157
>gi|336367247|gb|EGN95592.1| hypothetical protein SERLA73DRAFT_186692 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379967|gb|EGO21121.1| hypothetical protein SERLADRAFT_475872 [Serpula lacrymans var.
lacrymans S7.9]
Length = 214
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W R + I +++G K D L
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKAD----L 136
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q T+ +A A + LN +SA NV + K I L
Sbjct: 137 SDKRQVTL-EEATAKSTQLNIMFMETSAKAGHNVKGLFKKIAMSL 180
>gi|340503282|gb|EGR29885.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 213
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ KI LGD H+GKT +E+++ D ++ P G++ + KT+ + I +W+ G
Sbjct: 20 IKHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTIGVDFLAKTITIDEKSIRLQLWDTAG 79
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDF 200
+ + +P +D+ + +FD+T + + ++ +W Q + P I++ K D
Sbjct: 80 QERFRSLIPSYLRDATCAVIVFDITQKTSFDNLDKWIQDYKDNRGIDAPFILVANKLDMK 139
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
+ + Q +A A+++ + SA NV + K + L I ++
Sbjct: 140 LSREVTQQ-----EAEQKAQSIRVNYYEISAKTGENVLNMFKSMATSLQPIEQSI 189
>gi|327277372|ref|XP_003223439.1| PREDICTED: ras-related protein Rab-6A-like [Anolis carolinensis]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 6/179 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 18 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 77
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + +FDLT+ + + +W R + I +++G K D
Sbjct: 78 GQERFRSLIPSYIRDSAAAVIVFDLTNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD- 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
D + + AK L+ +SA NV ++ + + A L + T E++
Sbjct: 137 ----LADKRQITTEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMDSTPEKS 191
>gi|440798204|gb|ELR19272.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 184
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ ++GDC +GKT+ ++++V ++ ++ S G + K LL G I +W+ G
Sbjct: 10 VKVVIVGDCGVGKTALVQRFVFNKFDKHDST-IGAAFVTKDLLADGVLIKLEMWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFIQ 202
+ + P+ + + A L ++D+TS + + W+ + R A+P +++G K
Sbjct: 69 RYRSLSPLYFRGADACLMVYDVTSSQSFADLEGWFSEFRSMAGAAVPMVVVGNK------ 122
Query: 203 LPIDLQWT---IASQARAYAKALNATLFFSSATYNINVNKIL 241
+DLQ T A A ++ + F +SA N V+++
Sbjct: 123 --MDLQTTRQVNARDAEEWSHGADCAHFVASAKDNTGVDEVF 162
>gi|48103887|ref|XP_392903.1| PREDICTED: ras-related protein Rab-18-B [Apis mellifera]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
LD D L LK+ ++G+ ++GK+S + ++ DE + G++ K + + G + +
Sbjct: 3 LDQDVLTVLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLA 62
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTA-IPIII 193
IW+ G + + P +D + ++D+T R T + W + CN+T I +++
Sbjct: 63 IWDTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKLETWLNELNTYCNKTDIIKMVV 122
Query: 194 GTKFD 198
G K D
Sbjct: 123 GNKID 127
>gi|345490640|ref|XP_001602002.2| PREDICTED: ras-related protein RabJ-like [Nasonia vitripennis]
Length = 219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V K+ LLG +GKTS + +Y+ + +P G + + + RI + +W+ G
Sbjct: 4 VEGKVVLLGSQGVGKTSLINRYINNAFNHQNNPTIGASFFTCKINLEDVRIKFQVWDTAG 63
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDF 200
+ + P+ +++ A +FD+T + ++ W + R + + I++G K D
Sbjct: 64 QERFRSMAPMYYRNANAAFLVFDITQYNSFTAIKSWVTELQRNVEEPMVLILVGNKVDLS 123
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ +D + + R YA+++ AT SA + V++ F+TA L
Sbjct: 124 EKRKVD-----SEECRKYAESIGATYHEISALTDEGVDQ--AFLTAAL 164
>gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein [Plasmodium berghei]
gi|6759653|gb|AAF27979.1|AF093827_1 GTP binding protein [Plasmodium berghei]
Length = 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KTL + + +W+
Sbjct: 9 LNKYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+R + ++ +W Q + + I +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIVLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
DL+ + A+ N +SA N+ + K I AKL P LE N
Sbjct: 128 ----LADLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKL---P-NLENNN 179
Query: 260 TIGEPIID 267
++D
Sbjct: 180 NHEANVVD 187
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|255072909|ref|XP_002500129.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
gi|226515391|gb|ACO61387.1| ras-related gtp-binding protein, alternative splice [Micromonas sp.
RCC299]
Length = 204
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+ K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 MAKYKLVFLGDQSVGKTSIISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D++SR + + RW + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVVVYDVSSRSSFANTSRWIDEVRTERGSDVIVVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + A A+ +SA NV + + I A L
Sbjct: 126 ----LTDKREVSVEEGDARAREAGVMFIETSAKAGFNVKALFRKIAAAL 170
>gi|15236081|ref|NP_195699.1| Ras-related protein RABH1C [Arabidopsis thaliana]
gi|75337423|sp|Q9SMR4.1|RAH1C_ARATH RecName: Full=Ras-related protein RABH1c; Short=AtRABH1c
gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana]
gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|332661734|gb|AEE87134.1| Ras-related protein RABH1C [Arabidopsis thaliana]
Length = 214
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + P G++ + KT+ + + +W+
Sbjct: 7 LAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA--RKCNQTAIPIIIGTKFD 198
G + + +P +DS + ++D+++R T + +W + + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTD 126
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + S+ K +SA N N+ + + I A L
Sbjct: 127 -----LVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171
>gi|402083928|gb|EJT78946.1| GTP-binding protein ypt5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 221
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARI 132
R + + K+ LLG+ +GK+S + ++V D+ + G + +T+ L +
Sbjct: 10 RGMGGNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTV 69
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPI 191
+ IW+ G + + P+ +++ + ++D+T +L W ++ R+ N+ I
Sbjct: 70 KFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIA 129
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ G K D + P D + + A AYA+ F +SA NV ++ I KL
Sbjct: 130 LAGNKLDLVTEQP-DKRAVSTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R D D KI L+GD +GKT+ L++++ +E + P G+ KT +G +
Sbjct: 3 RTNDEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPII 192
IW+ G + + + ++ +D+T T K+ +W + ++ + + I+
Sbjct: 63 CQIWDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIM 122
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
IG K D +D + +A+ Y ++ +SA N++ I A +F+
Sbjct: 123 IGNKID-----AVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFN 175
>gi|344304203|gb|EGW34452.1| GTP-binding protein SAS1 [Spathaspora passalidarum NRRL Y-27907]
Length = 209
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 16 MKLLLVGDSGVGKSCILLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 75
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V WYQ + N+ A ++G K DD +
Sbjct: 76 RFRTITTAYYRGAMGIIIIYDVTDSRSFENVENWYQTVTQHANEDAQIFLVGNKCDDEVN 135
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + Q + A LN SSA N NV+ I
Sbjct: 136 RQVSRE-----QGQELAARLNIPFLESSAKTNENVDSIF 169
>gi|344266375|ref|XP_003405256.1| PREDICTED: ras-related protein Rab-21-like [Loxodonta africana]
Length = 222
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLER 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 186
>gi|340726562|ref|XP_003401625.1| PREDICTED: ras-related protein Rab-18-like [Bombus terrestris]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LK+ ++G+ ++GK+S L ++ DE + G++ K + + G + +
Sbjct: 1 MDQDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTA-IPIII 193
IW+ G + + P +D + ++D+T R T + W + CN+T I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKLETWLNELNTYCNKTDIIKMVV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>gi|193875876|gb|ACF24574.1| Ras-related small GTPase Rab5 [Gymnochlora stellata]
Length = 198
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLGD +GK+S +E++V +E + P G + +T+ + + + IW+ G
Sbjct: 9 FKLVLLGDAAVGKSSCVERFVKNEFFEFQQPTIGAAFLTQTIPLEDYIVKFEIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII---GTKFDDF 200
+ + P+ + + A L ++D+T + W Q+ ++ Q A I+I G K D
Sbjct: 69 RYRSLAPMYYRGAAAALVVYDITDPDSFDGAKTWIQELQR--QGAADIVIGLAGNKLDLS 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q ID + +A+++A + +SA NV +I I KL
Sbjct: 127 SQRKID-----SKEAKSFADENGCIFYETSAKTGANVQEIFVAIAQKL 169
>gi|348676764|gb|EGZ16581.1| hypothetical protein PHYSODRAFT_314323 [Phytophthora sojae]
Length = 314
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLG+ +GKT+ + + E + + G+ + + V A + IW+ G +
Sbjct: 120 KIVLLGNSGVGKTNLISRLHKGEFNEEFASTIGVEFLTHVVKVDNADVKAQIWDTAGQER 179
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI-PIIIGTKFDDFIQL 203
+ + + L +FD+ +R +L+ V RW Q + + ++G K D L
Sbjct: 180 FHAMMSTYYRKAAGALLVFDVGNRASLQDVERWLDQLLNVAEPGLHATLVGNKCD----L 235
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
P D + A +AR +A A + +SA +NV + + + A +
Sbjct: 236 PADKRAVTAEEARQFAAAHHMAYVETSAKTGLNVEEAFRGLVAAI 280
>gi|384250747|gb|EIE24226.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 200
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ L+GD ++GK+S L ++ D E +P G++ K L V R+ +IW+ G
Sbjct: 9 LKVLLVGDSNVGKSSLLLRFTADTFEDSVAPTIGVDFRLKFLTVNAKRLKLTIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQARKCN--QTAIPIIIGTKFDDF 200
+ + + + I+F +D+T R T +S+ W ++ + A+ +I+ K D
Sbjct: 69 RFRTLTSSYYRGAQGIVFAYDVTRRETFESIEDIWMREVDMYSTVDNAVKMIVANKVDKE 128
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ + ++ A+A+ +SA N+ V + + + K+ D P
Sbjct: 129 AEREVS-----RAEGAAFARKHGCLFVETSAKANMAVGQAFEELVMKILDTP 175
>gi|432103526|gb|ELK30630.1| Ras-related protein Rab-31 [Myotis davidii]
Length = 665
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 7 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ I + I G K D D
Sbjct: 67 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 126
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++ P + N
Sbjct: 127 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI--PPLDPQENGN 177
Query: 261 IG 262
G
Sbjct: 178 TG 179
>gi|301759615|ref|XP_002915660.1| PREDICTED: ras-related protein Rab-21-like [Ailuropoda melanoleuca]
Length = 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 14 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 73
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 74 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 133
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 134 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 184
>gi|410965116|ref|XP_003989098.1| PREDICTED: ras-related protein Rab-21 [Felis catus]
Length = 222
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 186
>gi|303390262|ref|XP_003073362.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
gi|303302508|gb|ADM12002.1| Rab5-like GTPase [Encephalitozoon intestinalis ATCC 50506]
Length = 197
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ +LG +GK+S + KYV E G + + KT+ I + IW+ G
Sbjct: 13 FKMVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTPEGSIKFEIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ +P+ + + L ++D+TS + ++ RW ++ + + + I ++IG K D
Sbjct: 73 RYNSLIPMYYRGAQVALIVYDITSVESFETAKRWVEELSFEKPREFIKVLIGNKSDLEED 132
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ Q Q + YA + N F SSA N+ +I I K+
Sbjct: 133 RKVEFQ-----QGKEYADSQNLLFFESSAKTGKNIAEIFNAIAEKV 173
>gi|350584261|ref|XP_003481707.1| PREDICTED: ras-related protein Rab-21-like [Sus scrofa]
Length = 222
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 186
>gi|296488008|tpg|DAA30121.1| TPA: ras-related protein Rab-21 [Bos taurus]
Length = 196
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEK 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 186
>gi|350418387|ref|XP_003491843.1| PREDICTED: ras-related protein Rab-18-like [Bombus impatiens]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LK+ ++G+ ++GK+S L ++ DE + G++ K + + G + +
Sbjct: 1 MDQDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTA-IPIII 193
IW+ G + + P +D + ++D+T R T + W + CN+T I +++
Sbjct: 61 IWDTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKLETWLNELNTYCNKTDIIKMVV 120
Query: 194 GTKFD 198
G K D
Sbjct: 121 GNKID 125
>gi|291389571|ref|XP_002711381.1| PREDICTED: RAB21, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 221
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 134
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 135 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 185
>gi|414590929|tpg|DAA41500.1| TPA: hypothetical protein ZEAMMB73_483526 [Zea mays]
Length = 209
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 9 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++R + + +W + R + I +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSKWIDEVRTERGGDVIIVLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + + AK LN +SA N+ + + I A L
Sbjct: 128 ----LVDKRQVSTEEGESKAKELNVMFIETSAKAGFNIKPLFRKIAAAL 172
>gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis]
Length = 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ +R + + RW ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVANRQSFLNTARWIEEVRTERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A A+ +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGDAKAREFGVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|392595561|gb|EIW84884.1| GTP binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 214
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W + R + I +++G K D +
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTTKWIEDVRSERGNDVIIVLVGNKADLSDKR 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ L+ +A + +N +SA NV + K I L
Sbjct: 141 QVTLE-----EATTKSTEMNIMFMETSAKAGHNVKSLFKKIALSL 180
>gi|297800092|ref|XP_002867930.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
gi|297313766|gb|EFH44189.1| hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+D + A +A+ YA+ LFF +SA NV +I I +L
Sbjct: 127 LLDARKVTAEEAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|2500067|sp|P55745.3|RAB21_CANFA RecName: Full=Ras-related protein Rab-21; Flags: Precursor
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>gi|242046344|ref|XP_002461043.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
gi|241924420|gb|EER97564.1| hypothetical protein SORBIDRAFT_02g039720 [Sorghum bicolor]
Length = 209
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 9 LAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++R + + +W + R + I +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTSKWIDEVRTERGGDVIIVLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + + AK LN +SA N+ + + I A L
Sbjct: 128 ----LVDKRQVSTEEGESKAKELNVMFIETSAKAGFNIKPLFRKIAAAL 172
>gi|242808404|ref|XP_002485155.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
gi|218715780|gb|EED15202.1| RAB GTPase Ypt5, putative [Talaromyces stipitatus ATCC 10500]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYAK F +SA NV ++ I KL
Sbjct: 138 ENP-DKRAIATADAEAYAKEAGLLFFETSAKTTTNVKELFTAIAKKL 183
>gi|111226872|ref|XP_001134601.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|90970812|gb|EAS66917.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 212
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 8/178 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L+ +K L+G GKTS + + V + + P G ++KT I +W+
Sbjct: 19 LIPVKCVLIGPTFSGKTSLVVRLVRETFSKESQPTVGAMFLNKTFQFSTHFIKLEVWDTA 78
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD- 198
G K P+ K S + +FDL+ R + W + + + AI I+IG K D
Sbjct: 79 GQEKFNSLAPMYFKKSKVAIIVFDLSDRQSFVKAKMWNNEFKTHATEPAIMILIGNKCDL 138
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+ L D+ I + +++ T F +SA N NVN I + I K IPW E
Sbjct: 139 NKTVLQSDIDDFIREEKE---NSIDFTYFEASAKENTNVNNIFETIAGK---IPWKEE 190
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 43 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 102
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 103 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 162
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 163 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 206
>gi|340382696|ref|XP_003389854.1| PREDICTED: ras-related protein Rab-3-like [Amphimedon
queenslandica]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D + KI ++G+ +GKT+++ +Y D G++ K L+ RI
Sbjct: 13 MDVNFDYMYKILMVGNSGVGKTAYVSRYCDDHFNPAFISTVGIDFRVKNLIRNQKRIKLQ 72
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIG 194
IW+ G + Q ++ + MFDLTS T + W QQ ++ + AI ++IG
Sbjct: 73 IWDTAGQERYQAITTAYYHGAMGFIVMFDLTSEDTFSACRMWIQQIKEMALENAIILLIG 132
Query: 195 TKFDDFIQLPIDLQWTIASQA-RAYAKALNATLFFSSATYNINVNKILKF----ITAKLF 249
K D + Q +++++ + +L F +SA N N+ + ++ IT K+
Sbjct: 133 NKVD------LTAQRQVSTESIEEFTDSLGIHFFETSAKENTNIKESAEYLVDAITQKMS 186
Query: 250 DIPWTLERN 258
+ T+E+N
Sbjct: 187 E---TIEKN 192
>gi|449269807|gb|EMC80553.1| Ras-related protein Rab-33A, partial [Columba livia]
Length = 205
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI ++GD ++GKT ++ G G++ +KT+ + G RI +W+ G
Sbjct: 5 FKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGERIKVQVWDTAGQE 64
Query: 144 KAQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-----IIIGTKF 197
+ + + ++ A++F++D+T + ++ W ++ CN A+P +++G K
Sbjct: 65 RFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIEE---CNGHAVPAMVPRVLVGNKC 121
Query: 198 D--DFIQLPIDLQWTIASQARAYAKALNATLFFSSA---TYNINVNKILKFITAKL 248
D D IQ+P +S A +A A N LF +SA + NV+ I + +L
Sbjct: 122 DLKDLIQVP-------SSMALKFADAHNMLLFETSAKDPKESQNVDAIFMCLACRL 170
>gi|358335778|dbj|GAA38156.2| Ras-related protein Rab-18A, partial [Clonorchis sinensis]
Length = 168
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
V +K+ +LGD +GK+S + ++V D + G + TL++ G I ++IW+ G
Sbjct: 7 VPIKLIVLGDSGVGKSSLIRRFVEDHFQPEEPATIGFDFKPFTLMIDGELIQFNIWDTAG 66
Query: 142 DAKAQDHL-PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI-PIIIGTKFD 198
+ +L P + + +++D+TS+ +L SV W +Q + T++ ++IG K D
Sbjct: 67 AERYSGYLTPSFYRGANGAFYVYDITSKKSLNSVHYWIEQTEQFTHTSVMKMLIGNKVD 125
>gi|355564472|gb|EHH20972.1| Ras-related protein Rab-21 [Macaca mulatta]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>gi|109097798|ref|XP_001117520.1| PREDICTED: ras-related protein Rab-21-like [Macaca mulatta]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>gi|7661922|ref|NP_055814.1| ras-related protein Rab-21 [Homo sapiens]
gi|13633613|sp|Q9UL25.3|RAB21_HUMAN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|6002585|gb|AAF00048.1|AF091035_1 GTP-binding protein RAB21 [Homo sapiens]
gi|18255274|gb|AAH21901.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|62203472|gb|AAH92475.1| RAB21, member RAS oncogene family [Homo sapiens]
gi|117646202|emb|CAL38568.1| hypothetical protein [synthetic construct]
gi|119617676|gb|EAW97270.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119617677|gb|EAW97271.1| RAB21, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|168279117|dbj|BAG11438.1| Ras-related protein Rab-21 [synthetic construct]
Length = 225
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 138
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 139 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 189
>gi|400977|sp|P31583.1|RHN1_NICPL RecName: Full=Ras-related protein RHN1
gi|19691|emb|CAA46112.1| small GTP binding protein [Nicotiana plumbaginifolia]
Length = 200
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
SH +L+A K+ LLGD GK+S + ++V + + G TL V A
Sbjct: 5 SHNNLNA------KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNAT 58
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP 190
+ + IW+ G + P+ + + A + ++D+TS + +W Q+ +K N +
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVM 118
Query: 191 IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ LFF +SA +NVN I I +L
Sbjct: 119 ALAGNKAD-----LEDRRKVTAEEARLYAE--ENGLFFMETSAKTAVNVNAIFYEIAKRL 171
>gi|402886848|ref|XP_003906828.1| PREDICTED: ras-related protein Rab-21 [Papio anubis]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>gi|380023930|ref|XP_003695762.1| PREDICTED: ras-related protein Rab-18-B-like [Apis florea]
Length = 223
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
LD D L LK+ ++G+ ++GK+S + ++ DE + G++ K + + G + +
Sbjct: 3 LDQDVLTVLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLA 62
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTA-IPIII 193
IW+ G + + P +D + ++D+T R T + W + CN+T I +++
Sbjct: 63 IWDTAGQERFRTLTPSYYRDGQGAILVYDVTDRITFMKLETWLNELNTYCNKTDIIKMVV 122
Query: 194 GTKFD 198
G K D
Sbjct: 123 GNKID 127
>gi|448090573|ref|XP_004197105.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|448094995|ref|XP_004198136.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|359378527|emb|CCE84786.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
gi|359379558|emb|CCE83755.1| Piso0_004342 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
Query: 81 LVALKISLLGD-CHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR-ISYSIWE 138
L KI LGD +GKTS + +++ D + + G++ + KT+ + + I +W+
Sbjct: 10 LRKYKIVFLGDQSAVGKTSLITRFMYDTFDDQYAATIGIDFLSKTMYLEDNKTIRLQLWD 69
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKF 197
G + + +P +DS + +D+T+R + +++ +W Q + + + I +I+G K
Sbjct: 70 TAGQERFRSLIPSYIRDSHVAVVCYDITNRKSFQNLHKWIQDVKSERGEDVIIVIVGNKL 129
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSAT-YNINVNKILKFITAKLFDIPWTLE 256
D L Q T + + YAK++ A+ ++T N NV + K I + L + T +
Sbjct: 130 D----LNARRQVT-SEEGEEYAKSVGASFSIETSTKANHNVKLLFKKIASSLPEFESTAQ 184
Query: 257 RNLTIGEPI 265
N + E +
Sbjct: 185 NNSSQSETV 193
>gi|332220901|ref|XP_003259597.1| PREDICTED: ras-related protein Rab-21 [Nomascus leucogenys]
Length = 225
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 138
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 139 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 189
>gi|296212384|ref|XP_002752808.1| PREDICTED: ras-related protein Rab-21 [Callithrix jacchus]
Length = 225
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 138
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 139 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 189
>gi|281340633|gb|EFB16217.1| hypothetical protein PANDA_003669 [Ailuropoda melanoleuca]
Length = 221
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 134
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 135 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 185
>gi|114645863|ref|XP_522469.2| PREDICTED: ras-related protein Rab-21 [Pan troglodytes]
gi|397526055|ref|XP_003832955.1| PREDICTED: ras-related protein Rab-21 [Pan paniscus]
Length = 224
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 18 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 78 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 138 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 188
>gi|393216771|gb|EJD02261.1| GTP binding protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + +FD+T+R + S +W + R + I +++G K D +
Sbjct: 81 FRSLIPSYIRDSSVAIVVFDITNRQSFLSTRKWIDEVRSERGNDVIIVLVGNKADLSDKR 140
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ L+ QA+ A L +SA NV + + I L
Sbjct: 141 EVTLE-----QAQELADELKIMFMETSAKAGHNVKSLFRKIALAL 180
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 6 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 66 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 126 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 169
>gi|307777890|dbj|BAJ21341.1| Rab-family small GTPase Rab11H [Tetrahymena thermophila]
Length = 218
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR--ISYSIWEVTGD 142
KI ++GD +GKTSFL +Y+ + P G+ + K +L+ G + IW+++G
Sbjct: 13 KIIMVGDPRVGKTSFLIRYIKGVLPKSPMPTIGVEYLSKQVLLSGGEGIVKAQIWDMSGS 72
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--- 198
K + + S+ L FDLT + K+ +W Q+ + I I +IG K D
Sbjct: 73 EKYKSISVAHYRKSVGALLFFDLTELESFKNTKKWLQEIENHTEEGIKIMLIGNKLDLIE 132
Query: 199 -DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
D Q +D Q I +AK N +SA NV + + + ++
Sbjct: 133 EDPSQRKVDKQEVI-----EFAKKHNLIYEETSAVSGKNVKESFQTLIESIY 179
>gi|47222578|emb|CAG02943.1| unnamed protein product [Tetraodon nigroviridis]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|429964349|gb|ELA46347.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 202
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 71 HSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGA 130
HS R +L KI +LG+ ++GKTS ++V DE + G++++ K + V
Sbjct: 2 HSKR-----DLTTYKIIILGESYVGKTSIARRFVNDEFDTSLFSTIGIDLLKKIVKVDDT 56
Query: 131 RISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP 190
+ IW+ G + + + I+ +FDL + + RW++ ++P
Sbjct: 57 EVKLDIWDTAGQERFHSITKSYYRSADGIILVFDLLDLKSFDCIDRWFEGIYTETDRSVP 116
Query: 191 I-IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
I ++G K+D+ + D + + A+ +N F +SA +N+ + + +
Sbjct: 117 IFLVGNKYDE-AEHKKDFVLDVFEEK---ARNMNVEFFVTSAKNGLNIELLFSRMAEE-- 170
Query: 250 DIPWTLERNLTI-GEPIID 267
L RN + G PI D
Sbjct: 171 -----LSRNENVLGTPIND 184
>gi|323337771|gb|EGA79014.1| Sec4p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
++ + A Q A AK L SSA + NVN+I
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF 173
>gi|258578121|ref|XP_002543242.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
gi|237903508|gb|EEP77909.1| GTP-binding protein ypt5 [Uncinocarpus reesii 1704]
Length = 217
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
P D + A+ A AYA+ F +SA + NV ++ I KL
Sbjct: 138 DSP-DKRAVQAADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL 183
>gi|355714869|gb|AES05144.1| ras-related protein Rab-21 [Mustela putorius furo]
Length = 213
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 2 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 61
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 62 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 122 IDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 176
Query: 257 R 257
R
Sbjct: 177 R 177
>gi|125980342|ref|XP_001354195.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|195167530|ref|XP_002024586.1| GL22545 [Drosophila persimilis]
gi|54642500|gb|EAL31247.1| GA20071 [Drosophila pseudoobscura pseudoobscura]
gi|194107991|gb|EDW30034.1| GL22545 [Drosophila persimilis]
Length = 219
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKT ++++ G+ E+ G+ G++ KT+ V +I IW+ G
Sbjct: 22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTI-GVDFSMKTIEVEAKQIKLQIWDTAGQ 80
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFI 201
+ + + + +L ++D+T R + ++ +W ++ R+ + + II IG K D
Sbjct: 81 ERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILIGNKCDLET 140
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ +D + +AR + + LF +SA N+NV + + +L
Sbjct: 141 EREVDFE-----EARQMCQYIPEILFVMETSAKENMNVEDAFRCLATEL 184
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
gi|134066794|emb|CAM65254.1| small GTP binding protein rab6-like protein [Leishmania infantum
JPCM5]
Length = 274
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR-ISYSIWEVTGDA 143
K+ LLGD +GKTS + +++ D +Q P G++ KT+ + R + +W+ G
Sbjct: 26 KLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRLHLWDTAGQE 85
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ +P ++S A + ++D+TSR T S +W + R + + +++G K D
Sbjct: 86 RFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLVGNKVDQ--- 142
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A +A A N SA + N+ + + + A L
Sbjct: 143 -ASERREVSAEEAMKKASECNVLFMEVSAKHGTNIKHMFRQVAAAL 187
>gi|414886776|tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, partial [Zea mays]
Length = 249
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR + + +W + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + AK L +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|359320530|ref|XP_003431485.2| PREDICTED: RAB21, member RAS oncogene family, partial [Canis lupus
familiaris]
Length = 214
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 3 AGRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 62
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 63 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 122
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 123 IDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 177
Query: 257 R 257
R
Sbjct: 178 R 178
>gi|356533295|ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ + E +P G++ K L V G R+ +IW+ G
Sbjct: 13 LSFKILLIGDSAVGKSSLLVSFISNSAEDI-APTIGVDFKIKMLTVGGKRLKLTIWDTAG 71
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T ++ W ++ NQ + +++G K D
Sbjct: 72 QERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQNCVKMLVGNKVD 131
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + + A A+ L F SA NV + + + K+ ++P LE
Sbjct: 132 RDSERVVSKE-----EGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEG 186
Query: 259 LT 260
T
Sbjct: 187 ST 188
>gi|348521238|ref|XP_003448133.1| PREDICTED: ras-related protein Rab-21-like [Oreochromis niloticus]
Length = 216
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 11 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 70
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 71 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKID--- 127
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
L D ++ +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 128 -LDKDRHVSV-EEAESYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQAEER 181
>gi|413933483|gb|AFW68034.1| putative GTP-binding protein [Zea mays]
Length = 199
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V + + G +TL V + + IW+ G +
Sbjct: 13 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD--DFI 201
P+ + + A + ++D+T+ + +W Q+ + + NQ I + G K D D
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNPASFTRAKKWVQELQAQGNQNTIVALAGNKADMLDAR 132
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKIL 241
Q+P A +A+AYA+ LFF +SA INVN I
Sbjct: 133 QVP-------AEEAKAYAQ--ENGLFFMETSAKTAINVNDIF 165
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 19 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 78
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 79 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 138
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 139 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 182
>gi|402594577|gb|EJW88503.1| Rab21 protein [Wuchereria bancrofti]
Length = 223
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
+L KI LLG+ +GKTS + +YV ++ + + K L V G + +IW+
Sbjct: 13 SLFNFKIVLLGEGAVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQAVVLNIWDT 72
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKS--VIRWYQQ-ARKCNQTAIPIIIGTK 196
G K P+ +DS L ++D+T + + V W ++ R +IIG K
Sbjct: 73 AGQEKFHALGPIYYRDSHGALLIYDVTDTNSFEKAPVKMWVKELKRMLGDDVYLVIIGNK 132
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D +D +A YAK++ A F +SA NI V ++ ++ L +
Sbjct: 133 VDLERNRNVD-----TDEAIGYAKSIGAEHFETSAKDNIGVTQVFDYLVKGLVE 181
>gi|115496760|ref|NP_001068785.1| ras-related protein Rab-21 [Bos taurus]
gi|122144675|sp|Q17R06.1|RAB21_BOVIN RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|109658186|gb|AAI18089.1| RAB21, member RAS oncogene family [Bos taurus]
Length = 222
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEK 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 186
>gi|73535740|pdb|1YZQ|A Chain A, Gppnhp-Bound Rab6 Gtpase
Length = 170
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 4 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 63
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 64 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 122
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 123 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 167
>gi|226501020|ref|NP_001150271.1| ras-related protein Rab-6A [Zea mays]
gi|242045718|ref|XP_002460730.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|194701460|gb|ACF84814.1| unknown [Zea mays]
gi|195637990|gb|ACG38463.1| ras-related protein Rab-6A [Zea mays]
gi|241924107|gb|EER97251.1| hypothetical protein SORBIDRAFT_02g033930 [Sorghum bicolor]
gi|414590332|tpg|DAA40903.1| TPA: Ras protein Rab-6A [Zea mays]
Length = 208
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR + + +W ++ R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + AK L +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|18266415|gb|AAL67567.1|AF461434_1 small GTP binding protein rab6 [Babesia gibsoni]
Length = 227
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI LLG+ GKTS + ++V D Q + G++ + K + V G + +W+ G
Sbjct: 21 IKIVLLGEQSTGKTSIVTRFVYDHFVQQYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
+ + +P +DS A + ++D+T+R + + V W + ++ AI +I+G K D
Sbjct: 81 RFRTLMPSYIRDSSAAIVVYDITNRESFERVKEWVKDIKELRGDKAIIVIVGNKTD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+D + + A L +SA N+N + + +L
Sbjct: 137 -LLDKRKVSYDEGEEEAGKLECLFCETSAKNGDNINDLFNTMATELL 182
>gi|359322436|ref|XP_003639844.1| PREDICTED: ras-related protein Rab-6A [Canis lupus familiaris]
Length = 208
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFI 201
+ + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 121 AVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 163
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GKT+ L ++ +E P G+ KT++ I IW+ G
Sbjct: 13 FKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
K + + ++ L ++D+T + T +V +W + R+ + I ++IG K D +Q
Sbjct: 73 KYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLIGNKCD--LQ 130
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+++ A +A+ N +SA INV++ + + ++++
Sbjct: 131 ---EMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYN 175
>gi|378754716|gb|EHY64745.1| hypothetical protein NERG_02148 [Nematocida sp. 1 ERTm2]
Length = 202
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L KI LGD +GKT+ + KYV + + P G++ + + G ++ +W+
Sbjct: 9 LPKYKIVFLGDTAVGKTTLITKYVFSTETKDYHPTIGVDFFAQKTEIGGKTVNLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPI-IIGTKFD 198
G + + +P +DS + MFDLT + T V W K N + + I ++G K D
Sbjct: 69 GQERFRSLIPNYTRDSFMAVIMFDLTRKETFDRVDGWITDFVLKNNDSKLKILVVGNKLD 128
Query: 199 DFIQLPIDLQWT---IASQARAYAKALNATLFFSSATYNINVNKILKFI 244
F + + Q T IA + + Y A T ++ N VN+I + I
Sbjct: 129 LF-EKQENKQITKEEIAEKVQKYGAAYVETCSLTTEGINSLVNEITQTI 176
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|388503938|gb|AFK40035.1| unknown [Medicago truncatula]
Length = 214
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+ L ++ + + SP G++ K L V G R+ +IW+ G
Sbjct: 15 LSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDTAG 74
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T ++ W ++ NQ + +++G K D
Sbjct: 75 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVD 134
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + + + + AK L L SA NV K + + K+ + P LE
Sbjct: 135 KDSERAVSRE-----EGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEE 188
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|126327865|ref|XP_001363135.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Monodelphis
domestica]
Length = 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|392567066|gb|EIW60241.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 214
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + K + + + +W+ G +
Sbjct: 20 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDRTVRLQLWDTAGQER 79
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +D + +FD+T+R + S +W R + I +++G K D L
Sbjct: 80 YRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKAD----L 135
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q T+ +A A A+ LN +SA NV + K I L
Sbjct: 136 SDKRQVTL-EEANAKAQELNIMFMETSAKAGHNVKSLFKKIAMSL 179
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K L+GD +GK++ L ++ DE P G+ + + VR I IW+ G
Sbjct: 16 FKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQE 75
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ L ++D+T R + +SV RW + R+ + + I++G K D
Sbjct: 76 RFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNKCD---- 131
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
+ + +A+ +A+A +SA N+NV ++ + +FDI T +R+L
Sbjct: 132 -LGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDI--TNQRSL 185
>gi|409107174|pdb|4DKX|A Chain A, Crystal Structure Of The Rab 6a'(Q72l)
gi|409107175|pdb|4DKX|B Chain B, Crystal Structure Of The Rab 6a'(Q72l)
Length = 216
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GLERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|355562999|gb|EHH19561.1| Ras-related protein Rab-22A, partial [Macaca mulatta]
gi|355784359|gb|EHH65210.1| Ras-related protein Rab-22A, partial [Macaca fascicularis]
Length = 188
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
++ L D +GK+S + ++V D + +P G + M KT+ + + IW+ G +
Sbjct: 1 RLILFQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 60
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+ P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 61 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL---- 116
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 117 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 160
>gi|348520842|ref|XP_003447936.1| PREDICTED: ras-related protein Rab-3D-like [Oreochromis niloticus]
Length = 221
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 67 PSLCHSHRHLDADNL-VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL 125
P H R N K+ ++G+ +GKTSFL +Y D G++ KT+
Sbjct: 7 PGAAHEQRDPADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTI 66
Query: 126 LVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN 185
R+ IW+ G + + + ++ L M+D+TS+ + +V W Q + +
Sbjct: 67 YRNNKRVKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDITSQESFCAVQDWATQIKTYS 126
Query: 186 -QTAIPIIIGTKFD--DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
A +++ K D D Q+P + + AK L F +SA NINV ++
Sbjct: 127 WDNAQVVLVANKLDLEDDRQVPTE-------DGKRLAKELGFHFFEASAKDNINVKQVFD 179
Query: 243 FITAKLFDI 251
KL D+
Sbjct: 180 ----KLVDV 184
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|410915364|ref|XP_003971157.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Takifugu
rubripes]
Length = 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|167518440|ref|XP_001743560.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777522|gb|EDQ91138.1| predicted protein [Monosiga brevicollis MX1]
Length = 180
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ LLGD GK+S + YV P G + + K + + + SIW+ G
Sbjct: 6 VKLCLLGDAGCGKSSLAQLYVYGSCPPRLEPTIGASFLTKMITLDNRELKLSIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN--QTAIPIIIGTKFDDFI 201
K + P+ +D+ A + ++D+T T ++V W + N Q I G K D
Sbjct: 66 KYRGLAPMYYRDAEAAVIVYDITKASTFQNVRSWVSELTAINPGQRLALAIAGNKAD--- 122
Query: 202 QLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKIL 241
+D Q +A Q A YA+++ A F +SA INV+++
Sbjct: 123 ---LDEQRQVAYQDASKYAESVGAIFFETSAIQGINVHELF 160
>gi|156373826|ref|XP_001629511.1| predicted protein [Nematostella vectensis]
gi|156216513|gb|EDO37448.1| predicted protein [Nematostella vectensis]
Length = 207
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE---GLNMMDKTLLVRGARISYSIWEVT 140
KI L+GD + GKT L KY G++K G G+ G++ M KT+ ++ RI IW+
Sbjct: 12 FKILLIGDTNTGKTKILCKYAGEDKINGNPSGKQTIGIDFMLKTITIKDKRIKLQIWDTA 71
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF-- 197
G + + + ++ IL ++D+T T S+ W R+ + I ++G K
Sbjct: 72 GQERFRTITTAYYRGAMGILLVYDITQAKTFNSLPSWLSSIREYAPANVVISLVGNKCHK 131
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
++P++L A++ + + S +INV ++ + + + E+
Sbjct: 132 QSKREVPVELGEQFAAEHEMRFREV-------SCEMDINVEEVFQILAEDILSQREPTEK 184
Query: 258 NL 259
L
Sbjct: 185 QL 186
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|195163365|ref|XP_002022521.1| GL12921 [Drosophila persimilis]
gi|194104513|gb|EDW26556.1| GL12921 [Drosophila persimilis]
Length = 200
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++ D +GK+S L ++ D G++ +T+ + G R+ IW+ G
Sbjct: 9 FKLLIIADSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIDGLRVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW ++ + +++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIIVYDVTNGDSFANVRRWLEEIQNNCDVVNKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
P D + I A+ +AK ++ L+ +SA NINV+ + IT ++ +
Sbjct: 125 P-DCKVVITEDAQRFAKQMDIELYETSAKDNINVDNMFLSITRQVLN 170
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK+ L +Y DE G+ +TL++ + IW+ G
Sbjct: 18 FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQE 77
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ + ++D+T R T + RW ++ R ++ + I+IG K D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSD---- 133
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+D + AR +A+ +SA NV + +++F+I
Sbjct: 134 -LVDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNI 181
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|147903483|ref|NP_001080506.1| RAB6A, member RAS oncogene family [Xenopus laevis]
gi|28302338|gb|AAH46683.1| Rab6-prov protein [Xenopus laevis]
Length = 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|145537620|ref|XP_001454521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422287|emb|CAK87124.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 8/174 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+ KI LG+ +GKTS + +++ D P G++ + KTL V + +W+
Sbjct: 10 MQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTA 69
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P +DS A + +D+T+ + + + +W + + + I I+G K D
Sbjct: 70 GQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKID- 128
Query: 200 FIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+D + I + A AK L A+ SA NV++ K ++ L P
Sbjct: 129 -----LDQERVIQTDVGEAKAKELGASFSEVSAKSAHNVSEFFKKLSYDLQGNP 177
>gi|45360657|ref|NP_989002.1| uncharacterized protein LOC394598 [Xenopus (Silurana) tropicalis]
gi|38174213|gb|AAH61274.1| hypothetical protein MGC75714 [Xenopus (Silurana) tropicalis]
Length = 201
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ L+GD +GK+S L ++ + G++ +TL++ G R+ I
Sbjct: 5 DYDHL--FKLLLIGDSGVGKSSLLLRFSDNSFSGSYITTIGVDFKIRTLVLDGERVKLQI 62
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + +++ ++ ++D+TS + +V RW + + + +++G K
Sbjct: 63 WDTAGQERFRTITSTYYRNTHGVIVVYDVTSPESFVNVKRWLHEITQNCDSVCTVLVGNK 122
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + ++ A+ A+ +A + +F +SA N NV ++ +T
Sbjct: 123 DDDPSRKRVE-----AADAKRFADQMGVRMFETSAKENRNVEEMFLSVT 166
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|429327748|gb|AFZ79508.1| Ras family Rab small GTP-binding protein [Babesia equi]
Length = 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE-----GLNMMDKTL-LVRGARISYSIWE 138
KI LLGD +GK+ L +Y+ +G P + G+ +T+ L G + IW+
Sbjct: 11 KIILLGDATVGKSHMLCQYI-----KGTVPSQSKATIGVEFATRTVPLASGGTVKAQIWD 65
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKF 197
G + + + ++ L ++D+T+R + + +W ++ R I I ++G K
Sbjct: 66 TAGQERYRSITSAHYRRAVGALLVYDITNRQSFHNCRKWLKELRNAADDDIIITLVGNKV 125
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
D ++ L+ QA +A N T + +SA + NV +I + + + D+
Sbjct: 126 -DLVERDESLRQVHVEQAAKFASENNLTFYEASAVTSYNVKRIFEHLLQDVHDVK 179
>gi|426198336|gb|EKV48262.1| hypothetical protein AGABI2DRAFT_191893 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 75 HLDADNLVALKISLLGDCHIGKTSFLEKYVGDE-KEQGGSPGEGLNMMDKTLLVRGARIS 133
H D+ + KI ++G+ +GKTS L +Y + + + G + K +LV G ++
Sbjct: 6 HPRYDHGIDSKIVVMGNSGVGKTSLLHRYTQNRFDPKNTTSTSGAFFVTKKVLVNGLKVR 65
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPII 192
+W+ G + + P+ + + A L ++D+T+ T + V W Q+ RK C+ I I
Sbjct: 66 LQLWDTAGQERFRSMAPMYYRGANAALLLYDITNSSTFEDVRGWLQELRKNCSPELIIYI 125
Query: 193 IGTKFD 198
+G K D
Sbjct: 126 VGAKAD 131
>gi|33859751|ref|NP_077774.1| ras-related protein Rab-21 [Mus musculus]
gi|46577689|sp|P35282.4|RAB21_MOUSE RecName: Full=Ras-related protein Rab-21; AltName: Full=Rab-12;
Flags: Precursor
gi|32822759|gb|AAH55042.1| RAB21, member RAS oncogene family [Mus musculus]
gi|112292999|dbj|BAF02877.1| Rab21 [Mus musculus]
gi|148689817|gb|EDL21764.1| RAB21, member RAS oncogene family [Mus musculus]
Length = 222
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>gi|325180386|emb|CCA14789.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 369
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 77/160 (48%), Gaps = 3/160 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
D + LK+ L+GD +GK++ + ++ G +TL V RI +W+
Sbjct: 99 DVTLTLKVVLIGDSQVGKSNLVLRFTNSTFHAHSEQTVGFEFATRTLRVGKRRIKVQVWD 158
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKF 197
+G + Q + + ++ + ++D+T+R + +++ RW +Q ++ ++ + +++G K
Sbjct: 159 SSGKDRFQSLIAAYYRHAVGAMVVYDVTNRTSFENIERWLRQMQQYAHENLVMVLVGNKC 218
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
D LP Q + AR +A + +SA + NV
Sbjct: 219 -DLAHLPNSRQVSTLEAAR-FADKYSMEFLETSALDSTNV 256
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G R+ I
Sbjct: 9 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQI 66
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++++TS + +V RW + + +++G K
Sbjct: 67 WDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNK 126
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD + + + AR +A+ + F +SA NINV ++ IT
Sbjct: 127 ADD-----PERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCIT 170
>gi|113206062|ref|NP_001038105.1| ras-related protein Rab-6A [Gallus gallus]
gi|118573265|sp|Q1KME6.3|RAB6A_CHICK RecName: Full=Ras-related protein Rab-6A
gi|93209536|gb|ABF00126.1| GTP-binding protein [Gallus gallus]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +++
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|51948448|ref|NP_001004238.1| ras-related protein Rab-21 [Rattus norvegicus]
gi|81884468|sp|Q6AXT5.1|RAB21_RAT RecName: Full=Ras-related protein Rab-21; Flags: Precursor
gi|50927400|gb|AAH79323.1| RAB21, member RAS oncogene family [Rattus norvegicus]
gi|149066960|gb|EDM16693.1| RAB21, member RAS oncogene family [Rattus norvegicus]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>gi|240849355|ref|NP_001155346.1| ras-related protein Rab-21 [Ovis aries]
gi|238566822|gb|ACR46637.1| RAB21 [Ovis aries]
Length = 222
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEK 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQMDER 186
>gi|348538713|ref|XP_003456835.1| PREDICTED: ras-related protein Rab-6A-like [Oreochromis niloticus]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|300700984|ref|XP_002994928.1| hypothetical protein NCER_102415 [Nosema ceranae BRL01]
gi|239602942|gb|EEQ81257.1| hypothetical protein NCER_102415 [Nosema ceranae BRL01]
Length = 190
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ ++GKT+ L KY DE + G++ + K + V + +IW+ G
Sbjct: 8 FKLIIIGESNVGKTALLRKYKTDEFHESLLSTIGIDTVSKKIFVNKKPVLLNIWDTAGQE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTA-IPI-IIGTKFDDFI 201
+ +++ I +FDL+ TLKSV RWY+ ++T +PI +IG K D
Sbjct: 68 RFFSITKSYYRNADGIFLVFDLSVENTLKSVNRWYKNV--ISETGDVPIFLIGNKRD--- 122
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
L D+ I +N + +SA Y +NV+KI +
Sbjct: 123 -LIDDINHEIIKSKL----PVNMKYYSTSAKYGLNVSKIFE 158
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHATDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
+D + Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --MDTRVVTVDQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>gi|17555956|ref|NP_499454.1| Protein RAB-35 [Caenorhabditis elegans]
gi|6018411|emb|CAB57899.1| Protein RAB-35 [Caenorhabditis elegans]
Length = 209
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + + G++ +T+ + G R+ I
Sbjct: 6 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQI 63
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D+T+ + +V RW Q+ + +++G K
Sbjct: 64 WDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVGNK 123
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
++ + + + S AR YA+++N + F +SA + NV + IT+
Sbjct: 124 CEENERRVV-----LESDARNYAQSMNISFFETSAKEDKNVEPMFTCITS 168
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|336463884|gb|EGO52124.1| hypothetical protein NEUTE1DRAFT_132863 [Neurospora tetrasperma
FGSC 2508]
Length = 1001
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIW 137
+ K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW
Sbjct: 15 NRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEIW 74
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTK 196
+ G + + P+ +++ + ++D+T +L W ++ R+ N+ I + G K
Sbjct: 75 DTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGNK 134
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D +Q D + + A+AYAK F +SA NV + I KL
Sbjct: 135 L-DLVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|168002794|ref|XP_001754098.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162694652|gb|EDQ80999.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 13 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQLWDTA 72
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++R + + RW ++ R + I +++G K D
Sbjct: 73 GQERFRSLIPSYIRDSSVAVIVYDVSNRQSFLNTARWVEEVRTERGNDVIVMLVGNKTD- 131
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A AK L +S+ N+ + + I L
Sbjct: 132 ----LVDKRQVSIEEGDAKAKELQVMFIETSSKAGFNIKALFRKIAVAL 176
>gi|440905226|gb|ELR55633.1| Ras-related protein Rab-21, partial [Bos grunniens mutus]
Length = 214
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 3 AGRTYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 62
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 63 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 122
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A +YA+++ A + +SA N + ++ + ++ + E
Sbjct: 123 VDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 177
Query: 257 R 257
R
Sbjct: 178 R 178
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|145529337|ref|XP_001450457.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831341|emb|CAI39286.1| rab_B75 [Paramecium tetraurelia]
gi|124418068|emb|CAK83060.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D + P G++ + KTL I +W+
Sbjct: 12 LSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWDTA 71
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +D+ + + +SV++W + R + I ++ K
Sbjct: 72 GQERFRSLIPSYIRDSAVAVVCYDVEVKQSFESVVKWIEDVRLERGNDVIIFLVANK--- 128
Query: 200 FIQLPIDLQWTIAS--QARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
IDL+ + S Q AK +A SA NV + K I A L
Sbjct: 129 -----IDLENRVISTEQGATLAKEQDAHFIEVSAKLGSNVELLFKQIAATL 174
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|49456921|emb|CAG46781.1| RAB6A [Homo sapiens]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA +V ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYDVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|118082329|ref|XP_001233648.1| PREDICTED: ras-related protein Rab-21 [Gallus gallus]
Length = 220
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 134
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 135 ERHVSVQ-----EAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 185
>gi|409079898|gb|EKM80259.1| hypothetical protein AGABI1DRAFT_73286 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 342
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Query: 75 HLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKE-QGGSPGEGLNMMDKTLLVRGARIS 133
H D+ + KI ++G+ +GKTS L +Y + + + + G + K +LV G ++
Sbjct: 6 HPRYDHGIDSKIVVMGNSGVGKTSLLHRYTQNRFDPKNTTSTSGAFFVTKKVLVNGLKVR 65
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPII 192
+W+ G + + P+ + + A L ++D+T+ T + V W Q+ RK C+ I I
Sbjct: 66 LQLWDTAGQERFRSMAPMYYRGANAALLLYDITNSSTFEDVRGWLQELRKNCSPELIIYI 125
Query: 193 IGTKFD 198
+G K D
Sbjct: 126 VGAKAD 131
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|307207614|gb|EFN85274.1| Ras-related protein Rab-3 [Harpegnathos saltator]
Length = 222
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 21 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D
Sbjct: 81 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCD---- 136
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILK 242
++ + I+S+ R A+ L F +SA NINV + +
Sbjct: 137 --MEEERVISSERGRQLAEQLGVRFFETSAKENINVKAVFE 175
>gi|148230174|ref|NP_001083402.1| RAB21, member RAS oncogene family [Xenopus laevis]
gi|38014530|gb|AAH60498.1| MGC68816 protein [Xenopus laevis]
Length = 221
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAEEYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>gi|307170291|gb|EFN62646.1| Ras-related protein Rab-43 [Camponotus floridanus]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 87/169 (51%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKT ++++ G E+ G+ G++ KT+L+ G RI IW+ G
Sbjct: 24 FKIVLIGDCGTGKTCVVQRFRSGTFVERHGNT-IGVDFTMKTVLIDGKRIKLQIWDTAGQ 82
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAI-PIIIGTKFDDFI 201
+ + + + ++ ++D+T R T S+ RW ++ R+ + + + +++G K D
Sbjct: 83 ERFRTITQSYYRCANGVIVVYDITKRSTFLSLQRWVEEVRRYSSSHVLLVLVGNKCD--- 139
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+L+ ++A A + L L +SA N N++ I ++ ++L
Sbjct: 140 --LENLREVQKAEAEALCEYLPEVLHVVETSAKDNTNIDSIFFYLASEL 186
>gi|85014405|ref|XP_955698.1| GTP-binding protein [Encephalitozoon cuniculi GB-M1]
gi|19171392|emb|CAD27117.1| RAS-RELATED PROTEIN GTP-BINDING PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449330264|gb|AGE96524.1| ras-related protein GTP-binding protein [Encephalitozoon cuniculi]
Length = 203
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI +LG+ +GKT L KY D+ +Q G++ + K++++ G I +IW+ G +
Sbjct: 11 KIIVLGESDVGKTCLLHKYKEDDFKQSLMTTIGVDTVSKSIVLNGKNIMLNIWDTAGQER 70
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+++ IL +FD++ T V RW+ + R+ ++G K D ++
Sbjct: 71 FFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFLVGNKRD---KVD 127
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIGEP 264
+ + + + A + A + +SA NVN I + D+ L + T+G+
Sbjct: 128 SAMYHEMEGRFKNKADEMRARYYTTSAKTGENVNNIFE-------DMAMVLLKKQTLGQK 180
>gi|74834283|emb|CAI44504.1| rab_A74 [Paramecium tetraurelia]
Length = 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+ KI LG+ +GKTS + +++ D P G++ + KTL V + +W+
Sbjct: 10 MQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTA 69
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P +DS A + +D+T+ + + + +W + + + I I+G K D
Sbjct: 70 GQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKTD- 128
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
++ +Q+ + A A AK L A+ SA NV + K ++ L P
Sbjct: 129 -LESERQIQFDV---AEAKAKELGASFSEVSAKSAHNVAEFFKKLSYDLQGNP 177
>gi|355786315|gb|EHH66498.1| Ras-related protein Rab-21, partial [Macaca fascicularis]
Length = 205
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G +
Sbjct: 1 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 60
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQL 203
P+ +DS + ++D+T + + V W ++ RK I + I+G K D +
Sbjct: 61 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKER 120
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 121 HVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 169
>gi|50510367|dbj|BAD32169.1| mKIAA0118 protein [Mus musculus]
Length = 253
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 48 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 107
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 108 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 167
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 168 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 218
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|353236471|emb|CCA68465.1| probable YPT6-GTP-binding protein of the rab family [Piriformospora
indica DSM 11827]
Length = 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + KT+ + + +W+ G +
Sbjct: 21 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 80
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +DS + ++D+T+R + S +W R + I +++G K D
Sbjct: 81 FRSLIPSYIRDSSVAIVVYDITNRASFLSTSKWIDDVRSERGNDVIIVLVGNKAD----- 135
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + +A A LN +SA NV + K I L
Sbjct: 136 LSDKRQVTHEEASTKATQLNLMFMETSAKAGHNVKSLFKKIAMAL 180
>gi|223941194|dbj|BAH23089.1| small GTP binding protein Rab6 [Babesia bigemina]
Length = 217
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI LLG+ + GKTS + ++V D + G++ + K + V G + +W+ G
Sbjct: 21 IKIVLLGEQNTGKTSIVTRFVYDHFVPAYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
+ + +P +DS A + ++D+TSR + V W + ++ A+ +++G K D
Sbjct: 81 RFRTLMPSYIRDSSAAIVVYDITSRESFDKVGDWIKDIKELRGDKAVIVLVGNKTD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+D + + AK +SA N+N + I +L
Sbjct: 137 -LLDKRKVSYDEGEEQAKKFGCLFCETSAKNGDNINDLFNPIATELL 182
>gi|383857603|ref|XP_003704294.1| PREDICTED: ras-related protein RabJ-like [Megachile rotundata]
Length = 217
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+V K+ LG +GKTS + +YVG + P G + L V +I +W+
Sbjct: 3 IVEGKVVALGSQGVGKTSMIIRYVGKAFNEHVDPTIGASFFTCKLNVENVKIMLQVWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + P+ +++ A + +FDLT T ++ W + R+ + A+ + +IG K D
Sbjct: 63 GQERFRSMAPMYYRNANAAMLVFDLTQYNTFAAMKGWVTELRRNVEDAMVLAVIGNKSDL 122
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
+ +D A + R YA + A+ +S + + + I L + T + ++
Sbjct: 123 IKERQVD-----AEEGRVYATNIGASYHETSVLQDEGIENVFLDIGMGLLRLASTEQDSM 177
Query: 260 TI 261
+I
Sbjct: 178 SI 179
>gi|145540924|ref|XP_001456151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423961|emb|CAK88754.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+ KI LG+ +GKTS + +++ D P G++ + KTL V + +W+
Sbjct: 10 MQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTA 69
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P +DS A + +D+T+ + + + +W + + + I I+G K D
Sbjct: 70 GQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKTD- 128
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
++ +Q+ + A A AK L A+ SA NV + K ++ L P
Sbjct: 129 -LESERQIQFDV---AEAKAKELGASFSEVSAKSAHNVAEFFKKLSYDLQGNP 177
>gi|74831248|emb|CAI39270.1| rab_B74 [Paramecium tetraurelia]
Length = 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+ KI LG+ +GKTS + +++ D P G++ + KTL V + +W+
Sbjct: 10 MQKFKIVFLGNQSVGKTSIINRFIFDNFTGNEQPTVGIDFISKTLQVDNKSVRLQLWDTA 69
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P +DS A + +D+T+ + + + +W + + + I I+G K D
Sbjct: 70 GQERFRSLIPSYIRDSQAAIICYDITNEKSFQDLQKWIEDVKDERGDEVLIYILGNKID- 128
Query: 200 FIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + I + A AK L A+ SA NV++ K ++ L
Sbjct: 129 -----LDQERVIQTDVGEAKAKELGASFSEVSAKSAHNVSEFFKKLSYDL 173
>gi|366991981|ref|XP_003675756.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
gi|342301621|emb|CCC69392.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
Length = 210
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 17 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 76
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T +V +W++ + N A +++G K D
Sbjct: 77 RFRTITTAYYRGAMGIILVYDVTDERTFSNVKQWFKTVNEHANDEAQLLLVGNKSD---- 132
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + Q + AK L SSA + NVN+I F AKL
Sbjct: 133 --MDTRVVTYEQGESLAKELGLPFIESSAKNDDNVNEIF-FTLAKL 175
>gi|432920687|ref|XP_004079986.1| PREDICTED: ras-related protein Rab-39B-like [Oryzias latipes]
Length = 213
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIETGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ--TAIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++AR Q T + ++
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHTIVFML 120
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D Q + Q +A + A +SA INV +T +FD+
Sbjct: 121 VGHKCDLETQRQVTQQ-----EAEKLSGAYGMRYIETSARDAINVEHAFTELTRDIFDL 174
>gi|38679888|ref|NP_942599.1| ras-related protein Rab-6A isoform b [Homo sapiens]
gi|197102660|ref|NP_001125644.1| ras-related protein Rab-6A [Pongo abelii]
gi|397487240|ref|XP_003814713.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Pan paniscus]
gi|131796|sp|P20340.3|RAB6A_HUMAN RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|75055038|sp|Q5RAV6.3|RAB6A_PONAB RecName: Full=Ras-related protein Rab-6A
gi|4585565|gb|AAD25535.1|AF130986_1 RAS-related protein RAB6 [Homo sapiens]
gi|20379054|gb|AAM21087.1|AF498939_1 small GTP binding protein RAB6A [Homo sapiens]
gi|550072|gb|AAA60246.1| GTP-binding protein [Homo sapiens]
gi|54696264|gb|AAV38504.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|55728729|emb|CAH91104.1| hypothetical protein [Pongo abelii]
gi|61356023|gb|AAX41200.1| RAB6A member RAS oncogene family [synthetic construct]
gi|66911837|gb|AAH96818.1| RAB6A, member RAS oncogene family [Homo sapiens]
gi|119595313|gb|EAW74907.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595314|gb|EAW74908.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595316|gb|EAW74910.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119595318|gb|EAW74912.1| RAB6A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260519|dbj|BAF82437.1| unnamed protein product [Homo sapiens]
gi|158261287|dbj|BAF82821.1| unnamed protein product [Homo sapiens]
gi|190692045|gb|ACE87797.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|254071271|gb|ACT64395.1| RAB6A, member RAS oncogene family protein [synthetic construct]
gi|261860502|dbj|BAI46773.1| RAB6A, member RAS oncogene family [synthetic construct]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|299738319|ref|XP_001838277.2| Rab18 [Coprinopsis cinerea okayama7#130]
gi|298403253|gb|EAU83465.2| Rab18 [Coprinopsis cinerea okayama7#130]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 89/175 (50%), Gaps = 13/175 (7%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEK---EQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ +K+ L+G+ +GK+S L ++ DE+ E S G++ + V+G ++ SIW+
Sbjct: 15 INVKLLLIGNSSVGKSSLLLRF-SDEQWLPEDESSATIGVDFRVHKMEVKGKKVKLSIWD 73
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKF 197
G + + + + I+ ++D+ +R T +++ RWY + +++ + I++G K
Sbjct: 74 TAGQERFRTITSSYYRGAQGIILVYDVANRETFEALPRWYSELETYVSESVVKILVGNK- 132
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ Q+P ++ +A+ +N+ +SA + V ++ + + ++ D P
Sbjct: 133 EYSRQVP-------TAEGEKFAQKMNSLFVEASAKTAVGVKEVFQELVERILDTP 180
>gi|281348435|gb|EFB24019.1| hypothetical protein PANDA_003579 [Ailuropoda melanoleuca]
Length = 185
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
L D +GK+S + ++V D + +P G + M KT+ + + IW+ G + +
Sbjct: 1 LFQDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRA 60
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDL 207
P+ + S A + ++D+T T ++ W ++ R+ I + I D ID+
Sbjct: 61 LAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL----IDV 116
Query: 208 QWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 117 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 157
>gi|395541042|ref|XP_003772457.1| PREDICTED: ras-related protein Rab-21-like, partial [Sarcophilus
harrisii]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+D + K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW
Sbjct: 14 SDGAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 73
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTK 196
+ G + P+ +DS + ++D+T + + V W ++ RK I + I+G K
Sbjct: 74 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 133
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + + +Q +A Y++++ A + +SA N + ++ + ++ + E
Sbjct: 134 IDLEKERHVSVQ-----EAEMYSESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDE 188
Query: 257 R 257
R
Sbjct: 189 R 189
>gi|327272884|ref|XP_003221214.1| PREDICTED: ras-related protein Rab-21-like [Anolis carolinensis]
Length = 235
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 30 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 89
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 90 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLDK 149
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 150 ERHVSIQ-----EAETYAESVGARHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 200
>gi|224094073|ref|XP_002192267.1| PREDICTED: ras-related protein Rab-21 [Taeniopygia guttata]
Length = 220
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 134
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 135 ERHVSVQ-----EAEMYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 185
>gi|291384296|ref|XP_002708751.1| PREDICTED: RAB6A, member RAS oncogene family-like isoform 2
[Oryctolagus cuniculus]
gi|301759055|ref|XP_002915364.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Ailuropoda
melanoleuca]
gi|332211361|ref|XP_003254788.1| PREDICTED: ras-related protein Rab-6A isoform 1 [Nomascus
leucogenys]
gi|426245107|ref|XP_004016355.1| PREDICTED: ras-related protein Rab-6A [Ovis aries]
gi|296479823|tpg|DAA21938.1| TPA: RAB6A, member RAS oncogene family-like isoform 2 [Bos taurus]
gi|355566853|gb|EHH23232.1| hypothetical protein EGK_06662 [Macaca mulatta]
gi|355752448|gb|EHH56568.1| hypothetical protein EGM_06013 [Macaca fascicularis]
gi|380788413|gb|AFE66082.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
gi|380788417|gb|AFE66084.1| ras-related protein Rab-6A isoform b [Macaca mulatta]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|13195674|ref|NP_077249.1| ras-related protein Rab-6A isoform 2 [Mus musculus]
gi|13638404|sp|P35279.4|RAB6A_MOUSE RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|313104164|sp|Q9WVB1.2|RAB6A_RAT RecName: Full=Ras-related protein Rab-6A; Short=Rab-6
gi|7670415|dbj|BAA95059.1| unnamed protein product [Mus musculus]
gi|26341820|dbj|BAC34572.1| unnamed protein product [Mus musculus]
gi|26350389|dbj|BAC38834.1| unnamed protein product [Mus musculus]
gi|26350969|dbj|BAC39121.1| unnamed protein product [Mus musculus]
gi|74144412|dbj|BAE36058.1| unnamed protein product [Mus musculus]
gi|74146903|dbj|BAE41406.1| unnamed protein product [Mus musculus]
gi|74227574|dbj|BAE35649.1| unnamed protein product [Mus musculus]
gi|112292961|dbj|BAF02858.1| Rab6A [Mus musculus]
gi|148684515|gb|EDL16462.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148684520|gb|EDL16467.1| RAB6, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149068773|gb|EDM18325.1| rCG39700, isoform CRA_b [Rattus norvegicus]
gi|149068775|gb|EDM18327.1| rCG39700, isoform CRA_b [Rattus norvegicus]
Length = 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|326917471|ref|XP_003205022.1| PREDICTED: ras-related protein Rab-12-like [Meleagris gallopavo]
Length = 262
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 61 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 120
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D +
Sbjct: 121 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCEVD 180
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 181 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVIRN 233
>gi|300175460|emb|CBK20771.2| unnamed protein product [Blastocystis hominis]
Length = 196
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 12/175 (6%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
AD + K+ LLGD +GK+ + ++V DE P G + +T+ V I + IW
Sbjct: 2 ADQSLHFKLVLLGDTAVGKSCLVVRFVRDEFFPFQEPTIGAAFLTQTVNVDNVTIKFEIW 61
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTK 196
+ G + + P+ + + A + ++D+TSR + W ++ R+ + + + G K
Sbjct: 62 DTAGQERYRSLAPMYYRGAAAAIVVYDITSRESFNGAKTWVKELQRRGDPNVVIALAGNK 121
Query: 197 FD--DFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + Q+P + +A YA N LF +SA +NV +I + I KL
Sbjct: 122 CDLEENRQIPRE-------EAEEYA-VENGLLFMETSAKMALNVREIFESIGHKL 168
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GKT L ++ DE G+ +T+ ++G I IW+ G
Sbjct: 20 FKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIWDTAGQE 79
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + + ++ + ++D+T R T V+RW + R +I I +IG K D
Sbjct: 80 RYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNKVD---- 135
Query: 203 LPIDLQWTIASQARAYAKALNATLFFS--SATYNINVNKILKFITAKLFD 250
+DL+ A A +A+ + LFFS SA NV+ + +++D
Sbjct: 136 -LVDLRAVPAEDAVEFAE--DQGLFFSETSAFSGDNVDSAFFRLLEEIYD 182
>gi|357612732|gb|EHJ68147.1| hypothetical protein KGM_14978 [Danaus plexippus]
Length = 217
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKY-VGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
KI L+GDC GKT +++ G+ E+ G+ G++ KTL+V G R+ IW+ G
Sbjct: 21 FKIVLIGDCGTGKTCIVQRLKSGNFIERHGNTI-GVDFSMKTLIVDGKRVKLQIWDTAGQ 79
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ + + + ++ ++D+T R T S+ +W ++ R+ + + + +IG K D
Sbjct: 80 ERFRTITQSYYRSANGVIIVYDITKRSTFLSIQKWIEEVRRYTSSNVIVSLIGNKCDLTE 139
Query: 202 QLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
Q ++ + +++ + + +F +SA N NV + I +L
Sbjct: 140 QREVE-----PDEPKSFCRYVPEIMFVMETSAKDNTNVEDTFRNIATEL 183
>gi|126339429|ref|XP_001370428.1| PREDICTED: ras-related protein Rab-21-like [Monodelphis domestica]
Length = 227
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 22 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 81
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 82 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 141
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 142 ERHVSVQ-----EAETYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 192
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
+HR ++ D KI L+GD +GKT+ L ++ +E G+ +TL V G
Sbjct: 2 AHR-VEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
+ IW+ G + + + ++ L ++D+T R T +V+RW ++ R + I I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 192 IIGTKFDDFIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++ D L ++A + + A+ + +SA NV K + + A+++
Sbjct: 121 MMAGNKADLNHLR-----SVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYH 175
Query: 251 I 251
I
Sbjct: 176 I 176
>gi|395814868|ref|XP_003780961.1| PREDICTED: ras-related protein Rab-6A isoform 2 [Otolemur
garnettii]
Length = 208
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|50287271|ref|XP_446065.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701907|sp|O42819.1|SEC4_CANGA RecName: Full=Ras-related protein SEC4
gi|2959746|emb|CAA12071.1| putative SEC4 protein [Candida glabrata]
gi|49525372|emb|CAG58989.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + Q A AK L SSA + NVN+I F A+L
Sbjct: 137 --MDTRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIF-FTLARL 179
>gi|428182166|gb|EKX51028.1| hypothetical protein GUITHDRAFT_135041 [Guillardia theta CCMP2712]
Length = 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 4/187 (2%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
AD+ K+ +LGD +GKT + +++ + G+ G + M K + V G R++ IW
Sbjct: 2 ADDAAQAKVVVLGDTGVGKTCLVHRFIEGKFVPHGASTIGASFMVKKMNVGGMRLTMQIW 61
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
+ G + + P+ + + A + + D T+ + + V W ++ ++ I + +
Sbjct: 62 DTAGQERFRSMAPMYYRGAEAAILVLDCTNADSYEKVRSWVEELKRNASGEIFLALACNK 121
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
D ++ Q +A AYAK++ A +SA N ++++ + L T E+
Sbjct: 122 CDLVEERRVAQ----EEAEAYAKSIGAVCMETSAKSNKGIDELFGAVAKGLVQKKKTQEQ 177
Query: 258 NLTIGEP 264
G+
Sbjct: 178 GAGQGKK 184
>gi|198418761|ref|XP_002119635.1| PREDICTED: similar to Ras-related protein Rab-21 [Ciona
intestinalis]
Length = 218
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS + +Y D+ + ++K L + G R++ SIW+ G
Sbjct: 8 FKVVLLGEGCVGKTSLVLRYCEDKFNDKHITTLQASFLNKKLNIGGKRVNLSIWDTAGQE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
+ P+ +DS + ++D+T + + V W ++ RK Q I G K D
Sbjct: 68 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGQDICLCIAGNKIDLEKS 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ +Q +A YA ++ A +SA N ++ + ++ K+ +
Sbjct: 128 RHVSVQ-----EAEEYAASVGAKHVHTSAKLNKGIDDVFLTLSKKMMQVS 172
>gi|417397373|gb|JAA45720.1| Putative gtpase [Desmodus rotundus]
Length = 221
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 74
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 75 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 134
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 135 ERHVSIQ-----EAELYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 185
>gi|410923383|ref|XP_003975161.1| PREDICTED: ras-related protein Rab-27B-like [Takifugu rubripes]
Length = 213
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGA------ 130
D D +K+ LGD +GKT+FL +Y ++ + + G++ +K ++ G
Sbjct: 3 DWDYDYLIKLLALGDSGVGKTTFLHRYTDNKFNRKFTTTVGIDFREKRVMYTGTGVDGMT 62
Query: 131 ----RISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK--- 183
RI +W+ G + + +D++ L MFDLT+R + +V W Q +
Sbjct: 63 ERNFRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTNRQSFLNVRNWMSQLQANAY 122
Query: 184 CNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
C+ I +++GTK D +++ A QAR A F +SA ++V++
Sbjct: 123 CDSPDI-VLVGTKAD-----LRNMRDVHARQARDLADRYGIPYFETSAVTGVDVDR 172
>gi|134105123|pdb|2OCY|C Chain C, Complex Of The Guanine Exchange Factor Sec2p And The Rab
Gtpase Sec4p
Length = 170
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G +
Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ + + I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 65 FRTITTAYYRGAXGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD----- 119
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A Q A AK L SSA + NVN+I F AKL
Sbjct: 120 -XETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL 162
>gi|73535741|pdb|1YZT|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
gi|73535742|pdb|1YZT|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.05 A Resolution
Length = 184
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 20 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 79
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 80 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 139
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + +Q +A +YA+++ A + +SA N + ++
Sbjct: 140 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELF 174
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
Length = 215
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L KI LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 8 LTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTA 67
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPIIIGTKFD 198
G + + +P +DS + ++D+T + + + + +W + + + ++ I I+G K D
Sbjct: 68 GQERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDVKTERGSENVILCIVGNKSD 127
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATY-NINVNKILKFITAKL 248
L + Q T + A AK L AT+F ++T NV + K I L
Sbjct: 128 ----LSDERQVT-TEEGEAKAKELGATIFMETSTKAGHNVKNLFKKIAKSL 173
>gi|357116841|ref|XP_003560185.1| PREDICTED: ras-related protein RABH1b-like [Brachypodium
distachyon]
Length = 293
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 92 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 151
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR + + +W ++ R + I +++G K D
Sbjct: 152 GQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLVGNKTD- 210
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + AK L +SA N+ + + I A L
Sbjct: 211 ----LVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAAL 255
>gi|297798016|ref|XP_002866892.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312728|gb|EFH43151.1| hypothetical protein ARALYDRAFT_912477 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + P G++ + KT+ + + +W+
Sbjct: 7 LAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPII-IGTKFD 198
G + + +P +DS + ++D+++R T + +W R+ Q+ + I+ +G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIDDVHRERGQSDVIIVLVGNKTD 126
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + S+ K +SA N N+ + + I A L
Sbjct: 127 -----LVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171
>gi|170592039|ref|XP_001900777.1| Ras-related protein Rab-35 [Brugia malayi]
gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative [Brugia malayi]
Length = 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G R+ I
Sbjct: 9 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQI 66
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++++TS + +V RW + + +++G K
Sbjct: 67 WDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNK 126
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD P + + + AR +A+ + F +SA NINV ++ IT
Sbjct: 127 ADD----P-ERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCIT 170
>gi|15235113|ref|NP_193699.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
gi|75337446|sp|Q9SN68.1|RAF2B_ARATH RecName: Full=Ras-related protein RABF2b; Short=AtRABF2b; AltName:
Full=Ras-related protein Ara-7; AltName:
Full=Ras-related protein Rab5B; Short=AtRab5B
gi|13878093|gb|AAK44124.1|AF370309_1 putative small GTP-binding protein [Arabidopsis thaliana]
gi|2853090|emb|CAA16940.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|7268760|emb|CAB78966.1| small GTP-binding protein-like [Arabidopsis thaliana]
gi|12964606|dbj|BAB32669.1| Ara7 [Arabidopsis thaliana]
gi|15450605|gb|AAK96574.1| AT4g19640/F24J7_190 [Arabidopsis thaliana]
gi|17104761|gb|AAL34269.1| putative small GTP-binding protein [Arabidopsis thaliana]
gi|332658807|gb|AEE84207.1| Ras-related small GTP-binding family protein [Arabidopsis thaliana]
Length = 200
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+D + A A+ YA+ LFF +SA NV +I I +L
Sbjct: 127 LLDARKVTAEDAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 171
>gi|209156126|gb|ACI34295.1| Ras-related protein Rab-5C [Salmo salar]
Length = 220
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ + K+ LLG+ +GK+S + ++V + ++ G + +T+ + + + IW
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTK 196
+ G + P+ + + A + ++D+T+R T W ++ R+ + + + G K
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQRQASPNIVIALAGNK 135
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
D + +DLQ +A+AYA N+ LF +SA +NVN+I I KL
Sbjct: 136 ADVANKRAVDLQ-----EAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 182
>gi|45361477|ref|NP_989315.1| RAB6A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|39794406|gb|AAH64230.1| RAB6A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 208
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVFDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|145547898|ref|XP_001459630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834452|emb|CAI44550.1| rab_A63 [Paramecium tetraurelia]
gi|124427456|emb|CAK92233.1| unnamed protein product [Paramecium tetraurelia]
Length = 202
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
+KI +LG+ +GKT KY D+ + +K++ L G I+ +IW+ G
Sbjct: 5 IKIVMLGEGRVGKTCLTLKYCKDQFNENQQSSIDATFFEKSVDLGGGKNITLAIWDTAGQ 64
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFI 201
V +D+ + ++D+T + + V +W ++ R I I++ G K D
Sbjct: 65 EIFHALTTVYYRDAYGAVLVYDVTYKESFMKVEKWVEELRSFGTKDISIVVAGNKSDMKN 124
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
Q+ ID ++ Y K + A FF+SA I +N++ K
Sbjct: 125 QMQID-----KNEVEEYCKKIGAKHFFTSAKSGIGINEMFK 160
>gi|402595111|gb|EJW89037.1| RAB protein [Wuchereria bancrofti]
Length = 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G R+ I
Sbjct: 9 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQI 66
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++++TS + +V RW + + +++G K
Sbjct: 67 WDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNK 126
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD P + + + AR +A+ + F +SA NINV ++ IT
Sbjct: 127 ADD----P-ERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCIT 170
>gi|241151857|ref|XP_002406775.1| RAS-related protein, putative [Ixodes scapularis]
gi|215493921|gb|EEC03562.1| RAS-related protein, putative [Ixodes scapularis]
Length = 215
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +YV ++ + ++K L + G R+ +IW+ G
Sbjct: 13 SFKVVLLGEGCVGKTSLVLRYVQNKFNDKHFSTLQASFLEKKLNIAGKRVHLAIWDTAGQ 72
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
K P+ +DS + ++D+T + + V W ++ RK + + I+G K D
Sbjct: 73 EKFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVRELRKMLGGDVCLTIVGNKTDLEK 132
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
Q + + ++A AYA ++ AT +SA + + ++ ++ ++ ++
Sbjct: 133 QRAVPV-----AEAEAYAASVGATHLQTSAKLSRGIEELFLDLSKRMIEVA 178
>gi|189502804|gb|ACE06783.1| unknown [Schistosoma japonicum]
Length = 248
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ + R+ IW+ G
Sbjct: 57 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQE 116
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + +V W Q + + A +++G K D
Sbjct: 117 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCD---- 172
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
+D + + R A L F +SA NINV + +
Sbjct: 173 -LVDDRVVSVDRGRHLAHQLGLEFFEASAKENINVKNVFE 211
>gi|170044398|ref|XP_001849836.1| ras-related protein Rab-39B [Culex quinquefasciatus]
gi|167867568|gb|EDS30951.1| ras-related protein Rab-39B [Culex quinquefasciatus]
Length = 219
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 65 VRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKT 124
V P + RH+ L+GD +GK+S L+ + + + P G++
Sbjct: 2 VEPIFDYQFRHI-----------LIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHL 50
Query: 125 LLVR-GARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK 183
+ V+ G RI +W+ G + + ++S+ +L ++D+T+ + + + W +A++
Sbjct: 51 IEVKDGTRIKLQLWDTAGQERFRSITKSYYRNSVGVLLVYDITNHASFEHIPLWMMEAKR 110
Query: 184 CNQTAIPI--IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ P+ ++G K D + + + +AR++A+ +SA +NV +
Sbjct: 111 HIEPHRPVFALVGCKL-DLVNNGVQRREVSVEEARSFAEQHGLIFVETSARTGVNVREAF 169
Query: 242 KFITAKLFD 250
+T ++++
Sbjct: 170 SLVTQEVYN 178
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRI 175
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 60 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 119
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 120 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 179
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 180 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 223
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRI 175
>gi|406864129|gb|EKD17175.1| Rab5-like protein ypt5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 220
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARI 132
R + + K+ LLG+ +GK+S + ++V D+ + G + +T+ L +
Sbjct: 10 RGGNNNRFAQFKLVLLGESAVGKSSLVLRFVKDQFDDFRESTIGAAFLTQTISLDDNTTV 69
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPI 191
+ IW+ G + + P+ +++ + ++D+T +L +W ++ R+ N+ I
Sbjct: 70 KFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLDKAKQWVKELQRQANENIIIA 129
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ G K D P D + + A AYAK F +SA + NV ++ I KL
Sbjct: 130 LAGNKLDLVTAQP-DKRAITTADAEAYAKEAGLLFFETSAKTSENVRELFTSIAKKL 185
>gi|121582364|ref|NP_001073492.1| RAB39B, member RAS oncogene family [Danio rerio]
gi|118763672|gb|AAI28659.1| RAB39B, member RAS oncogene family [Danio rerio]
gi|182889234|gb|AAI64823.1| Rab39b protein [Danio rerio]
Length = 213
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISY 134
++A L ++ ++GD +GK+ + ++ Q P G++ + + + G RI
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 135 SIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ--TAIPII 192
IW+ G + + ++S+ L +FD+T+R + ++V W ++AR Q + + ++
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL 120
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+G K D Q + Q +A A A +SA INV + +T +F++
Sbjct: 121 VGHKCDLEPQRQVSQQ-----EAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFEL 174
>gi|398009439|ref|XP_003857919.1| small GTP binding protein rab6-like protein [Leishmania donovani]
gi|322496122|emb|CBZ31193.1| small GTP binding protein rab6-like protein [Leishmania donovani]
Length = 274
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR-ISYSIWEVTGDA 143
K+ LLGD +GKTS + +++ D +Q P G++ KT+ + R + +W+ G
Sbjct: 26 KLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRLHLWDTAGQE 85
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ +P ++S A + ++D+TSR T S +W + R + + +++G K D
Sbjct: 86 RFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGDDVVIMLVGNKVDQ--- 142
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A +A A N SA + N+ + + + A L
Sbjct: 143 -ASERREVSAEEAMKKAFECNVLFMEVSAKHGTNIKHMFRQVAAAL 187
>gi|123471850|ref|XP_001319122.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901898|gb|EAY06899.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI ++GD +GKTS + +YV E + G++ K + + G +I IW+ G K
Sbjct: 7 KIIVVGDSSVGKTSVIHRYVKGEFDSTIIATIGIDYRAKDIEINGQKIKLQIWDTIGQEK 66
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFIQL 203
+ P + + ++ +D T + + + W Q++IP+I +G K D L
Sbjct: 67 YRSLAPQYFRRADGVILFYDTTVKTSFTHLQNWLDSIINNAQSSIPVILVGNKVD----L 122
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
P + A +A+ LFF SA N+++I I
Sbjct: 123 P---EVVPKEHAIDFARDKKLELFFCSAKSGDNIDQIFNRI 160
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRI 175
>gi|392512970|emb|CAD26988.2| GTP-BINDING PROTEIN [Encephalitozoon cuniculi GB-M1]
Length = 198
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LG ++GKT+ + +Y+ E ++ P GL+ + T++V G R+ +W+ G +
Sbjct: 6 KIVFLGSSNVGKTTLMSQYLHQEVQKSYGPTIGLDFVSTTIVVSGHRVRLQLWDTAGQER 65
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP----IIIGTKFD 198
+P ++S + +FD+ + + +S+ W K N ++ +I+G K D
Sbjct: 66 FNSIIPNYTRNSFLAIIVFDMKDKGSFESIDHWINTLTKANDSSGRRVRILIVGNKKD 123
>gi|324512193|gb|ADY45056.1| Ras-related protein Rab-21 [Ascaris suum]
Length = 239
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
A+ K+ LLG+ +GK+S + +YV ++ + + K ++V G + +IW
Sbjct: 31 ANTSFTFKVVLLGEGAVGKSSLMLRYVENKFNPRHISTIQASFLCKKIVVDGNAVILNIW 90
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTK 196
+ G K P+ +DS L ++D+T + + V W ++ R+ ++ + +I+G K
Sbjct: 91 DTAGQEKFHALGPIYYRDSHGALLIYDITDLHSFEKVKSWVKELRRILGESVVLLIVGNK 150
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D ++ Q A YAK++ A +SA N+ +N+ + +T + +
Sbjct: 151 TDLERNRNVERQ-----TALEYAKSVGADHCETSAKNNVGINEAFELLTKAMIE 199
>gi|226498830|ref|NP_001142363.1| hypothetical protein [Zea mays]
gi|194708444|gb|ACF88306.1| unknown [Zea mays]
gi|414886777|tpg|DAA62791.1| TPA: hypothetical protein ZEAMMB73_332722 [Zea mays]
Length = 208
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +FD+ SR + + +W + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + AK L +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAAL 170
>gi|168014471|ref|XP_001759775.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162688905|gb|EDQ75279.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 211
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 13 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 72
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++R + + RW ++ R + I +++G K D
Sbjct: 73 GQERFRSLIPSYIRDSSVAVVVYDVSNRQSFMNTARWVEEVRTERGSDVIIMLVGNKTD- 131
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A AK +S+ N+ + + I A L
Sbjct: 132 ----LVDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAAL 176
>gi|168021891|ref|XP_001763474.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685267|gb|EDQ71663.1| Rab21-family small GTPase [Physcomitrella patens subsp. patens]
Length = 208
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ +LGD +GKTS +YV + + + + K L V G +S IW+ G
Sbjct: 9 IKLVILGDGRVGKTSLALRYVHNVFSEKQMATIQASFLTKRLTVDGQVVSLCIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ P+ +D+ A L ++DL + + V W ++ +K I + I G K D
Sbjct: 69 RFHALGPIYYRDADAALLVYDLLDKDSFDRVQSWVRELKKMASKNIVLSIAGNKSDMAKS 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
L ++Q A YA+++ AT F +SA N + + I ++
Sbjct: 129 LHGNMQ-----DAEMYAESIGATHFVTSAKLNAGIEETFMDIARRVM 170
>gi|15242309|ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
gi|297794787|ref|XP_002865278.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|400976|sp|P31582.1|RAF2A_ARATH RecName: Full=Ras-related protein RABF2a; Short=AtRABF2a; AltName:
Full=Ras-related protein Rab5A; Short=AtRab5A; AltName:
Full=Ras-related protein Rha1
gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|16484|emb|CAA41863.1| RHA1 [Arabidopsis thaliana]
gi|397594|emb|CAA80534.1| GTP-binding protein [Arabidopsis thaliana]
gi|9758988|dbj|BAB09498.1| ras-related GTP-binding protein RHA1 [Arabidopsis thaliana]
gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15 [Arabidopsis thaliana]
gi|297311113|gb|EFH41537.1| hypothetical protein ARALYDRAFT_494466 [Arabidopsis lyrata subsp.
lyrata]
gi|332007825|gb|AED95208.1| Ras-related protein RHA1 [Arabidopsis thaliana]
Length = 200
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+D + A +A YA+ +LFF +SA NV I I +L
Sbjct: 127 LLDARKVSAEEAEIYAQ--ENSLFFMETSAKTATNVKDIFYEIAKRL 171
>gi|363730689|ref|XP_003640848.1| PREDICTED: ras-related protein Rab-12 [Gallus gallus]
Length = 250
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 49 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 108
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D +
Sbjct: 109 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCEVD 168
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 169 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVIRN 221
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W+ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFSTVNQHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + Q A AK L +SA + NVN I F+ AKL
Sbjct: 137 --MDTRAVSTDQGEALAKELGIPFVEASAKDDTNVNDIF-FLLAKL 179
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
++ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|453089344|gb|EMF17384.1| ras-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 225
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQ 79
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQAASLDKAKAWVKELQRQANENIIIALAGNKADLVA 139
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYAK N F +SA NV ++ I KL
Sbjct: 140 EQP-DKRAVSTADAEAYAKEANLLFFETSAKTAENVKELFTAIAKKL 185
>gi|449677953|ref|XP_002167019.2| PREDICTED: ras-related protein Rab-21-like [Hydra magnipapillata]
Length = 217
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS L +Y D+ +++ L + RI+ SIW+ G
Sbjct: 10 FKVVLLGEGCVGKTSILLRYCQDKFNDKHLTTLQAAFLNRRLNIDSKRINLSIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ P+ +DS + ++D+T + + V W ++ RK I + I G K D +
Sbjct: 70 RFHALGPIYYRDSQGAILVYDITDEDSFQKVKNWVKELRKMLGEEICLCIAGNKIDMEKE 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
+ + S+A YAK++ A + +SA N + ++ +T + + TLE
Sbjct: 130 RHV-----LVSEAEEYAKSVGAKHYHTSAKLNRGIEEMFLDLTKSMVE-KQTLE 177
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ ++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|241958088|ref|XP_002421763.1| Ras-related protein Sec4; small GTPase of Rab family, putative
[Candida dubliniensis CD36]
gi|223645108|emb|CAX39704.1| Ras-related protein Sec4 [Candida dubliniensis CD36]
Length = 210
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V W+Q + N+ A ++G K DD +
Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVN 134
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + Q + A LN +SA N NV+ I
Sbjct: 135 RQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSIF 168
>gi|68475230|ref|XP_718333.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68475429|ref|XP_718237.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|353678099|sp|P0CY31.1|SEC4_CANAL RecName: Full=Ras-related protein SEC4
gi|353678100|sp|C4YL11.1|SEC4_CANAW RecName: Full=Ras-related protein SEC4
gi|353678101|sp|P0CY30.1|SEC4_CANAX RecName: Full=Ras-related protein SEC4
gi|2345152|gb|AAB67974.1| small GTP-binding protein SEC4p [Candida albicans]
gi|2642182|gb|AAC50022.1| Sec4p [Candida albicans]
gi|3859676|emb|CAA22013.1| ras-related protein sec4p [Candida albicans]
gi|46439996|gb|EAK99307.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46440096|gb|EAK99406.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238879654|gb|EEQ43292.1| GTP-binding protein SAS1 [Candida albicans WO-1]
Length = 210
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V W+Q + N+ A ++G K DD +
Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVN 134
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + Q + A LN +SA N NV+ I
Sbjct: 135 RQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSIF 168
>gi|167386978|ref|XP_001737975.1| small GTPase rabd [Entamoeba dispar SAW760]
gi|165899005|gb|EDR25714.1| small GTPase rabd, putative [Entamoeba dispar SAW760]
Length = 194
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ ++G+ +GKT + ++V D+ + G+ M+ K + V G ++ IW+ G
Sbjct: 1 MKLIMIGESSVGKTCCMNRFVSDQFSEVTKSTVGVGMVSKEIEVNGIKVKLQIWDTAGQE 60
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ ++++ + MFD+++R + +++ W K + + ++ G K D
Sbjct: 61 RFATLSSNYFRNAMGGVIMFDVSNRQSFENISNWIDACNKIEEKRVLVLAGNKVD----- 115
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + A AK F SA +N++ + +T ++ +P +N
Sbjct: 116 -LSERVITKEEGEARAKEFGLKYFEVSAKTGAGINEMFETLTKEIVTLPKVEAQN 169
>gi|154420577|ref|XP_001583303.1| Ras family protein [Trichomonas vaginalis G3]
gi|121917544|gb|EAY22317.1| Ras family protein [Trichomonas vaginalis G3]
Length = 203
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
++ LLGD +GKTS + +Y+ + G++ K + + G + IW+ G K
Sbjct: 7 RVILLGDSAVGKTSIINQYIYNSSGTDYKTTIGIDYFTKNVNIDGVPVRLQIWDTAGQEK 66
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+P ++ ++ +FD+T R + +V +WYQ + + G K D L
Sbjct: 67 FHAIIPSYIRNVSIVILVFDITQRQSFDNVQKWYQIVTDITKPKF-FLAGNKVD----LE 121
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
++ + T A+ YA ++ AT +S+ IN+ ++ + +
Sbjct: 122 LNREVTF-KDAKKYADSIGATYIETSSRTPINITELFNQVAS 162
>gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502]
gi|54658188|gb|EAL36862.1| Rab5 [Cryptosporidium hominis]
Length = 218
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGA-RISYSIWEVTGD 142
LK+ LLGD +GK+ + ++ DE + P G M +++ V + + IW+ G
Sbjct: 14 LKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQ 73
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ + P+ + + A + ++D+T+ T + W + + N I + ++G K+D
Sbjct: 74 ERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYD--- 130
Query: 202 QLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ T+ S+ AR YAK F +SA NV ++ + I KL
Sbjct: 131 ---LESSRTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKL 175
>gi|396082089|gb|AFN83701.1| GTP-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 203
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI +LG+ +GKT L KY D+ +Q G++ + K++++ G I +IW+ G +
Sbjct: 11 KIIVLGESDVGKTCLLHKYKEDDFKQSLMTTIGVDTVSKSIVLNGKNIMLNIWDTAGQER 70
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+++ IL +FD++ T V RW+ + R+ ++G K D ++
Sbjct: 71 FFSITKSYYRNADGILLIFDISDERTFSCVDRWFGRIREETGNVPLFLVGNKRD---KVD 127
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
+ ++ A+ + A + +SA NVN I +
Sbjct: 128 SATYHAMEGNFKSKAEEMKARYYTTSAKTGENVNNIFE 165
>gi|395333800|gb|EJF66177.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 214
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD +GKTS + +++ D + G++ + K + + + +W+ G +
Sbjct: 20 KIVLLGDQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKAMYLEDRTVRLQLWDTAGQER 79
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
+ +P +D + +FD+T+R + S +W R + I +++G K D L
Sbjct: 80 YRSLIPSYIRDCSVAIVVFDITNRQSFLSTSKWIDDVRSERGNDVIIVLVGNKAD----L 135
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
Q T+ +A A A LN +SA NV + K I L
Sbjct: 136 SDKRQVTL-EEANAKATQLNIMFMETSAKAGHNVKSLFKKIAMSL 179
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+ + G R+ I
Sbjct: 36 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRVKLQI 93
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++++TS + +V RW + + +++G K
Sbjct: 94 WDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNCENVQKVLVGNK 153
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
DD P + + + AR +A+ + F +SA NINV ++ IT
Sbjct: 154 ADD----P-ERRVVLEVDARRFAETMKIPFFETSAKENINVEEMFNCIT 197
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 14 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 74 RFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFKTVNEHANDEAQLLLVGNKSD---- 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + Q + AK L SSA + NVN+I F AKL
Sbjct: 130 --MDTRVVTYEQGESLAKELGLPFVESSAKNDDNVNEIF-FTLAKL 172
>gi|442617058|ref|NP_001259738.1| Rab35, isoform C [Drosophila melanogaster]
gi|323429945|gb|ADX64759.1| MIP14774p [Drosophila melanogaster]
gi|440216974|gb|AGB95577.1| Rab35, isoform C [Drosophila melanogaster]
Length = 190
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 94 IGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVAC 153
+GK+S L ++ D G++ +T+ + G R+ IW+ G + +
Sbjct: 8 VGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTITSTYY 67
Query: 154 KDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIAS 213
+ + ++ ++D+T+ + +V RW ++ + +++G K DD P D + I
Sbjct: 68 RGTHGVIVVYDVTNGESFANVRRWLEEIQNNCDVVKKVLVGNKNDD----P-DRKVVITE 122
Query: 214 QARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
A+ +AK ++ LF +SA NINV + IT ++ D
Sbjct: 123 DAQRFAKQMDIELFETSAKDNINVENMFLSITRQVLD 159
>gi|50311935|ref|XP_455999.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645135|emb|CAG98707.1| KLLA0F20471p [Kluyveromyces lactis]
Length = 212
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L KI LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 9 LRKYKIVFLGEQGVGKTSLITRFMYDTFDDNYQATIGIDFLSKTMYLDDKTIRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPIIIGTKFD 198
G + + +P +DS + ++D+T+R + + + +W + + + + I +I+G K D
Sbjct: 69 GQERFRSLIPSYIRDSHVAIVVYDVTNRKSFEYIDKWIEDVKMERGEENVILVIVGNKSD 128
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATY-NINVNKILKFITAKLF 249
++ + + + LNA LF ++T NV + K I AKL
Sbjct: 129 -----LVEERQVSTEEGERKSTVLNAKLFIETSTKAGFNVKTLFKKI-AKLL 174
>gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila]
gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777802|dbj|BAJ21297.1| Rab-family small GTPase Rab6B [Tetrahymena thermophila]
Length = 227
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+V KI LGD +GKTS + +++ D P G++ + KTL + + +W+
Sbjct: 9 VVKFKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTLQMDNKTLRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFD 198
G + + +P +DS A + ++D+T++ + +V +W ++ ++ A I+G K D
Sbjct: 69 GQERFKSLIPSYIRDSNAAIIVYDITNQNSFSNVTKWVEEVKEERGNNAFIFILGNKSD 127
>gi|123430802|ref|XP_001307966.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121889622|gb|EAX95036.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 189
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ +G+ +GKTS + +Y + + P G + T+ + + ++W+ G +
Sbjct: 4 KVPFVGNPSVGKTSIISRYASNVFNEETLPTVGACNFNFTINLNDEEVVMNVWDTAGQER 63
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQL 203
+ +P+ + S I+ FD++ T K+V WYQ+ R PI ++ K D ++
Sbjct: 64 FRSLVPLYTRGSSLIVITFDISEIETFKAVDDWYQKLRDEFGMKCPIFLVANKMDLDPKV 123
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
PI+ + +++A+A FF+SA N + ++ I
Sbjct: 124 PIN-------EIKSWAQAHQCQAFFTSAMTNRGIEELFTTI 157
>gi|73535743|pdb|1YZU|A Chain A, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535744|pdb|1YZU|B Chain B, Gppnhp-Bound Rab21 Gtpase At 2.50 A Resolution
gi|73535774|pdb|1Z0I|A Chain A, Gdp-Bound Rab21 Gtpase
gi|146387038|pdb|2OT3|B Chain B, Crystal Structure Of Rabex-5 Vps9 Domain In Complex With
Nucleotide Free Rab21
Length = 170
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 125
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + +Q +A +YA+++ A + +SA N + ++
Sbjct: 126 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELF 160
>gi|427787329|gb|JAA59116.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCD---- 137
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
D + A + R A L F +SA N+NV + + +L DI
Sbjct: 138 -MEDERVVSAERGRQLADQLGLEFFETSAKENVNVKAVFE----RLVDI 181
>gi|157120330|ref|XP_001653610.1| ras-related protein Rab-39B, putative [Aedes aegypti]
gi|108874991|gb|EAT39216.1| AAEL008959-PA [Aedes aegypti]
Length = 219
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 65 VRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKT 124
V P + RH+ L+GD +GK+S L+ + + + P G++
Sbjct: 2 VEPIFDYQFRHI-----------LIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFAHL 50
Query: 125 LLVR-GARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK 183
+ V+ G RI +W+ G + + ++S+ +L ++D+T+ + + + W +A++
Sbjct: 51 IEVKDGTRIKLQLWDTAGQERFRSITKSYYRNSVGVLLVYDITNHASFEHIPLWMMEAKR 110
Query: 184 CNQTAIPI--IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ P+ ++G K D + + + +AR++A+ +SA +NV +
Sbjct: 111 HIEPHRPVFALVGCKL-DLVNNGVQRREVSVEEARSFAEQNGLIFVETSARTGVNVREAF 169
Query: 242 KFITAKLFD 250
+T ++++
Sbjct: 170 SLVTQEVYN 178
>gi|391343813|ref|XP_003746200.1| PREDICTED: rab-like protein 2A-like [Metaseiulus occidentalis]
Length = 222
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 8/164 (4%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+D + +KI LGD +GK+ +E+++ DE + L + V G ++ W
Sbjct: 16 SDGVHRVKIICLGDSAVGKSKLVERFLLDEYKSNQLSTYALTLFRHKATVDGVNVAVDFW 75
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
+ G + Q + A + +FD+T + T K++ +WY++ R T I + K
Sbjct: 76 DTAGQERFQKLHASYYHQAHACVLVFDVTRKITYKNLQKWYEELRLQRPTIPCICVANK- 134
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
ID + + ++ ++ N +F+ SA+ NV K+
Sbjct: 135 -------IDADYDVTKKSFSFPLKHNMPIFYVSASDGTNVVKLF 171
>gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5 [Aspergillus fumigatus Af293]
gi|119500926|ref|XP_001267220.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|66849656|gb|EAL89984.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus Af293]
gi|119415385|gb|EAW25323.1| RAB GTPase Ypt5, putative [Neosartorya fischeri NRRL 181]
gi|159125065|gb|EDP50182.1| RAB GTPase Ypt5, putative [Aspergillus fumigatus A1163]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ + + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL-T 260
+ P D + + A AYA+ F +SA + NV ++ I KL + RNL T
Sbjct: 138 EHP-DKRAIPTADAEAYAREAGLLFFETSAKTSTNVKELFAAIAKKL-PLDQAGPRNLRT 195
Query: 261 IGEPIIDF 268
P +D
Sbjct: 196 TPRPGVDL 203
>gi|427787355|gb|JAA59129.1| Putative rab-protein 3 [Rhipicephalus pulchellus]
Length = 221
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCD---- 137
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
D + A + R A L F +SA N+NV + + +L DI
Sbjct: 138 -MEDERVVSAERGRQLADQLGLEFFETSAKENVNVKAVFE----RLVDI 181
>gi|302769738|ref|XP_002968288.1| rab family GTPase [Selaginella moellendorffii]
gi|302788640|ref|XP_002976089.1| rab family GTPase [Selaginella moellendorffii]
gi|300156365|gb|EFJ22994.1| rab family GTPase [Selaginella moellendorffii]
gi|300163932|gb|EFJ30542.1| rab family GTPase [Selaginella moellendorffii]
Length = 209
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 19/190 (10%)
Query: 60 VPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLN 119
VP TV P L K+ LGD +GKTS + +++ D+ + G++
Sbjct: 3 VPTATVSP-------------LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGID 49
Query: 120 MMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQ 179
+ KT+ + + +W+ G + + +P +DS + ++D+ +R + + RW +
Sbjct: 50 FLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRQSFLNTARWVE 109
Query: 180 QAR-KCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
+ R + I +++G K D +D + + A A+ +SA N+
Sbjct: 110 EVRTERGSDVIIVLVGNKTD-----LVDKRQVSIEEGDAKAREFGVMYIETSAKAGFNIK 164
Query: 239 KILKFITAKL 248
+ + I A L
Sbjct: 165 ALFRKIAAAL 174
>gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
gi|46228121|gb|EAK89020.1| Rab5 like small GTpase [Cryptosporidium parvum Iowa II]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGA-RISYSIWEVTGD 142
LK+ LLGD +GK+ + ++ DE + P G M +++ V + + IW+ G
Sbjct: 14 LKLVLLGDASVGKSCLVVRFSKDEFHEYQEPTIGAAFMTQSVNVDDDYTVKFEIWDTAGQ 73
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ + P+ + + A + ++D+T+ T + W + + N I + ++G K+D
Sbjct: 74 ERYRSLAPMYYRGAAAAIVVYDITNVETFQGAKSWISELQNINNNDIVVALVGNKYD--- 130
Query: 202 QLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ T+ S+ AR YAK F +SA NV ++ + I KL
Sbjct: 131 ---LESSRTVDSETARNYAKEKGILSFETSAKTGYNVQELFEEIARKL 175
>gi|66819457|ref|XP_643388.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75014104|sp|Q86JC8.1|RABH_DICDI RecName: Full=Ras-related protein RabH; Flags: Precursor
gi|60471477|gb|EAL69434.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 198
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ LK++++GD ++GK+S L ++ D + G + KT+L+RG I I + +G
Sbjct: 6 IKLKLTIIGDWNVGKSSLLYRFFNDVFYEQTKLSMGEHFFYKTVLIRGESIDLQITDTSG 65
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDF 200
K + + IL ++D++ + T ++ W +A K + I II+ +KFD
Sbjct: 66 MEKFRSLNNSFYSNLDGILIVYDISDQETFENTKLWLNEANKLAPKDCIKIIVASKFD-- 123
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
++ + ++ ++YA LN F +S+ +INV + FIT
Sbjct: 124 ----LENKVVDSNIVKSYADNLNLKFFETSSKNSINVEET--FIT 162
>gi|170583481|ref|XP_001896599.1| ras-related protein Rab-21 [Brugia malayi]
gi|158596123|gb|EDP34522.1| ras-related protein Rab-21, putative [Brugia malayi]
Length = 219
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
+ +L KI LLG+ +GKTS + +YV ++ + + K L V G + +IW
Sbjct: 11 SSSLFNFKIVLLGEGAVGKTSLMLRYVENKFSPQHVSTLQASFLSKKLHVDGQTVVLNIW 70
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
+ G K P+ +DS L ++D+T + + R + R +IIG K
Sbjct: 71 DTAGQEKFHALGPIYYRDSHGALLIYDVTDSHSFEKA-RKNELKRMLGDDVYLMIIGNKM 129
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D ++ +A YAK++ A F +SA NI V ++ ++ L +
Sbjct: 130 DLERNRNVN-----TDEAIGYAKSIGAKYFETSAKDNIGVTQVFDYLVKGLVE 177
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ ++L V G I IW+ G
Sbjct: 18 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQE 77
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+T R T +V RW ++ R +Q+ + ++IG K D
Sbjct: 78 RYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLIGNKSDLRHL 137
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+ + D A+ YA+A + +SA NV+ + +++ I
Sbjct: 138 VAVSTD-------DAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQI 181
>gi|195383704|ref|XP_002050566.1| GJ20130 [Drosophila virilis]
gi|194145363|gb|EDW61759.1| GJ20130 [Drosophila virilis]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 142 RVISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>gi|396081134|gb|AFN82753.1| Rab GTPase [Encephalitozoon romaleae SJ-2008]
Length = 201
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D++ K+ L+G+ +GKT +++Y + S G++ K+L V G ++
Sbjct: 1 MDSECKYLFKMILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEVEGEKVKLQ 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIG 194
IW+ G + + + + + I+ +FD+ S+ + ++ W + RK N+ II+G
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIMVFDMGSKESFDNLGDWLAEVRKNTNENVEIIILG 120
Query: 195 TKFDDFIQLPI---DLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
K DD ++ + +++ ++ ++ + +SA NI VN +++T KL D
Sbjct: 121 NKVDDKEKIVVTEEEIERFLSENG-----IEKSSFYMTSAKDNICVNDSFEYLTRKLID 174
>gi|85014147|ref|XP_955569.1| GTP-binding protein [Encephalitozoon cuniculi GB-M1]
gi|449329976|gb|AGE96243.1| GTP-binding protein [Encephalitozoon cuniculi]
Length = 217
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LG ++GKT+ + +Y+ E ++ P GL+ + T++V G R+ +W+ G +
Sbjct: 25 KIVFLGSSNVGKTTLMSQYLHQEVQKSYGPTIGLDFVSTTIVVSGHRVRLQLWDTAGQER 84
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP----IIIGTKFD 198
+P ++S + +FD+ + + +S+ W K N ++ +I+G K D
Sbjct: 85 FNSIIPNYTRNSFLAIIVFDMKDKGSFESIDHWINTLTKANDSSGRRVRILIVGNKKD 142
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K L+GD +GK++ L ++ DE P G+ + + VR I IW+ G
Sbjct: 15 FKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ L ++D+T R + +SV RW + R+ + + I++G K D
Sbjct: 75 RFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGNKCD---- 130
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
+ + +A+ +A+A +SA N+NV ++ + +FDI T +R+L
Sbjct: 131 -LGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDI--TNQRSL 184
>gi|374262364|ref|ZP_09620931.1| hypothetical protein LDG_7344 [Legionella drancourtii LLAP12]
gi|363537150|gb|EHL30577.1| hypothetical protein LDG_7344 [Legionella drancourtii LLAP12]
Length = 301
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LLGD ++GKT+ L+KY+G+ G+ KT+ + I+ IW+ G K
Sbjct: 11 KIILLGDSYVGKTTLLQKYIGEGDPDCYYATLGVEQKLKTIALFNQTINLRIWDAAGVPK 70
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLP 204
+ + ++ L FD+T +L +V + + R+ + A I++G K
Sbjct: 71 LRHLVKTYLHEAHGALICFDVTKTSSLHNVDTFVELFRQHQKNAPIILVGCK-------- 122
Query: 205 IDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKLF------DIPWTLER 257
DL+ +++ QA+A A+ L +S + NV+++ + ++F I LER
Sbjct: 123 TDLKRVVSTEQAQAKAEQLGVVYIETSGSKKTNVDEVFTQLIQQIFVLKVLSKIKPELER 182
Query: 258 NLT 260
T
Sbjct: 183 QFT 185
>gi|239788471|dbj|BAH70915.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 210
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + +A AK LN +SA NV ++ + + A L
Sbjct: 130 ----LTDKRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK+ L +Y +E G+ +TL++ + IW+ G
Sbjct: 17 FKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKAQIWDTAGQE 76
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ + ++D+T R T + RW ++ R ++ + I++G K D
Sbjct: 77 RYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIILVGNKSD---- 132
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
++ Q I+++ A+ +A+ +SA +NV + ++F+I ++NL
Sbjct: 133 --LEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNI--VNKKNLVA 188
Query: 262 GE 263
GE
Sbjct: 189 GE 190
>gi|346323143|gb|EGX92741.1| Rab5-like protein ypt5 [Cordyceps militaris CM01]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARI 132
R + K+ LLG+ +GK+S + ++V D+ + G + +T+ L +
Sbjct: 10 RGPSNNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDETTTV 69
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPI 191
+ IW+ G + + P+ +++ + ++D+T +L W ++ R+ N+ I
Sbjct: 70 KFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIA 129
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ G K D + P D + A+ A AYAK F +SA NV ++ I KL
Sbjct: 130 LAGNKLDLVTEQP-DKRAIPAADAEAYAKEAGLLFFETSAKTAENVPELFTAIARKL 185
>gi|195066090|ref|XP_001996775.1| GH24197 [Drosophila grimshawi]
gi|193892005|gb|EDV90871.1| GH24197 [Drosophila grimshawi]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 142 RVISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>gi|240848863|ref|NP_001155439.1| rab6-like [Acyrthosiphon pisum]
gi|239788473|dbj|BAH70916.1| ACYPI001698 [Acyrthosiphon pisum]
Length = 209
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + +A AK LN +SA NV ++ + + A L
Sbjct: 130 ----LTDKRQVLAEDGEHKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|156554894|ref|XP_001600275.1| PREDICTED: ras-related protein Rab-39B-like [Nasonia vitripennis]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L+ + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + RW +AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRTSFEHIPRWMMEARRHIEPHRPVFCLVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ + +ARA+A +SA +NV + + +T ++++
Sbjct: 128 LVTNGGRREVSREEARAFADQYGVHHVETSAKTGLNVEEAFRTVTQEVYN 177
>gi|157136703|ref|XP_001656883.1| ras-related protein Rab, putative [Aedes aegypti]
gi|94469070|gb|ABF18384.1| RAB protein [Aedes aegypti]
gi|108869891|gb|EAT34116.1| AAEL013620-PA [Aedes aegypti]
Length = 203
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + G++ +T+++ G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDNTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW Q+ +++G K DD +
Sbjct: 69 RFRTITNTYYRGTHGVIVVYDVTNGESFANVKRWLQEIEANCDVVNKVLVGNKNDDPARK 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+ I A+ +A ++ LF +SA NINV ++ IT ++
Sbjct: 129 VV-----ITEDAQRFANQMDIQLFETSAKDNINVEEMFLAITEQVL 169
>gi|442759105|gb|JAA71711.1| Putative gtpase [Ixodes ricinus]
Length = 215
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +YV ++ + + K+L + G R+ +IW+ G
Sbjct: 13 SFKVVLLGEGCVGKTSLVLRYVQNKFNDKHLTTLQASFLQKSLNIAGKRVHLAIWDTAGQ 72
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
K P+ +DS + ++D+T + + V W ++ RK + + I+G K D
Sbjct: 73 EKFHALGPIYYRDSNGAILVYDITDEDSFQKVKSWVRELRKMLGGDVCLTIVGNKTDLEK 132
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
Q + + ++A AYA ++ AT +SA + + ++ ++ ++ ++
Sbjct: 133 QRAVPV-----AEAEAYAASVGATHLQTSAKLSRGIEELFLDLSKRMIEVA 178
>gi|396081874|gb|AFN83488.1| Rab5-like GTPase [Encephalitozoon romaleae SJ-2008]
Length = 197
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ +LG +GK+S + KYV E G + + KT+ + I + IW+ G
Sbjct: 13 FKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTIFTQEGSIKFEIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ +P+ + + L +D+TS + ++ RW ++ + + + I ++IG K D
Sbjct: 73 RYNSLIPMYYRGAQVALIAYDITSMESFETAKRWVEELSFEKPKEFIKVLIGNKSDLESD 132
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ Q + + YA + N F SSA N+ +I I ++
Sbjct: 133 RKVEYQ-----KGKEYADSQNLLFFESSAKTGKNIAEIFNAIAERV 173
>gi|330793802|ref|XP_003284971.1| hypothetical protein DICPUDRAFT_96892 [Dictyostelium purpureum]
gi|325085092|gb|EGC38506.1| hypothetical protein DICPUDRAFT_96892 [Dictyostelium purpureum]
Length = 194
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GKTS L K+ D ++ ++ +K +++ G S IW+ G
Sbjct: 7 FKILLIGDSAVGKTSLLLKFADDTFQETSVNMTSVDYKNKNIVIDGRTFSLQIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + + +L ++D+T + T +V W Q+ R Q +++G KFD
Sbjct: 67 RFRTITSSFYRGAHGVLVVYDMTDQGTYNNVKLWMQEINRYAVQGVSKVLVGNKFD---- 122
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
D + ++ A+ YA ++ +SA NV + + +++
Sbjct: 123 -QDDRKVVSSTVAKEYADSIEIPFLETSAKTGFNVEQAFSTMANEIY 168
>gi|313239407|emb|CBY14345.1| unnamed protein product [Oikopleura dioica]
Length = 210
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 10 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 69
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFD- 198
G + + +P +DS + ++D+T+ + +W R T + I+ +G K D
Sbjct: 70 GQERFRSLIPSYIRDSTVAVVVYDVTNINSFNQTNKWIDDVRTERGTDVIIVLVGNKTDL 129
Query: 199 -DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D Q+ ID + AK LN +SA NV ++ + + A L
Sbjct: 130 ADKRQVSID-------EGERKAKELNVMFIETSAKTGYNVKQLFRRVAAAL 173
>gi|198424649|ref|XP_002130574.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 208
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 8/165 (4%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIW 137
++++ LKI LGD +GK+ +E+++ D + L + + + G +IS W
Sbjct: 9 SEDVEKLKIICLGDSAVGKSKLVERFLVDGYKPQQQSTYALTLFNYETKLNGKKISVDFW 68
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKF 197
+ G + P + A + +FD T + T K++ WY++ R+ +++ K
Sbjct: 69 DTAGQERFSSMHPSYYHQAQACILVFDATRKVTYKNLNNWYKELRQYRPNIPCLLVANK- 127
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
ID+ + + A+ N +F SA NV K+ +
Sbjct: 128 -------IDVDLGVTKRTFAFGTKHNLPQYFVSAANGTNVVKVFR 165
>gi|125811091|ref|XP_001361745.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|194758000|ref|XP_001961250.1| GF11093 [Drosophila ananassae]
gi|195153505|ref|XP_002017666.1| GL17187 [Drosophila persimilis]
gi|54636921|gb|EAL26324.1| GA20450 [Drosophila pseudoobscura pseudoobscura]
gi|190622548|gb|EDV38072.1| GF11093 [Drosophila ananassae]
gi|194113462|gb|EDW35505.1| GL17187 [Drosophila persimilis]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 142 RVISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>gi|17737457|ref|NP_523687.1| Rab3 [Drosophila melanogaster]
gi|194884193|ref|XP_001976180.1| GG22724 [Drosophila erecta]
gi|195333207|ref|XP_002033283.1| GM20500 [Drosophila sechellia]
gi|195483658|ref|XP_002090378.1| GE13081 [Drosophila yakuba]
gi|131800|sp|P25228.1|RAB3_DROME RecName: Full=Ras-related protein Rab-3
gi|158193|gb|AAA28843.1| rab3 [Drosophila melanogaster]
gi|7303712|gb|AAF58762.1| Rab3 [Drosophila melanogaster]
gi|16648446|gb|AAL25488.1| LP05860p [Drosophila melanogaster]
gi|40788408|dbj|BAD07037.1| Rab3 [Drosophila melanogaster]
gi|190659367|gb|EDV56580.1| GG22724 [Drosophila erecta]
gi|194125253|gb|EDW47296.1| GM20500 [Drosophila sechellia]
gi|194176479|gb|EDW90090.1| GE13081 [Drosophila yakuba]
gi|220947366|gb|ACL86226.1| Rab3-PA [synthetic construct]
gi|220956828|gb|ACL90957.1| Rab3-PA [synthetic construct]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 142 RVISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 37 IRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGK 96
+R R+ P T P P+ + + P R R + D L K+ L+GD +GK
Sbjct: 17 LRARVTP--AATPPGPTDIAAAPAPSLLGR---AMGTRDDEYDYL--FKVVLIGDSGVGK 69
Query: 97 TSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDS 156
++ L ++ +E G+ +++ V G I IW+ G + + + +
Sbjct: 70 SNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGA 129
Query: 157 IAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFIQLPIDLQWTIAS 213
+ L ++D+ T ++V RW ++ R + I I ++G K D +P D
Sbjct: 130 VGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTD------- 182
Query: 214 QARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+ARA+A+ + +SA + NV + I +++ I
Sbjct: 183 EARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 220
>gi|401825835|ref|XP_003887012.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998169|gb|AFM98031.1| Rab GTPase [Encephalitozoon hellem ATCC 50504]
Length = 202
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D++ KI L+G+ +GKT +++Y + S G++ K+L G ++
Sbjct: 1 MDSECKYLFKIILIGNSGVGKTCLMKRYTDETYSFTQSSTIGVDFKIKSLEAEGEKVKLQ 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIG 194
IW+ G + + + + + I+ +FD+ S+ + ++ W + RK N+ II+G
Sbjct: 61 IWDTAGQERFRAIISNYYRGAHGIIIVFDMGSKESFDNLGDWLGEVRKNTNENVEMIILG 120
Query: 195 TKFDDFIQLPIDLQWTIASQARAYAKALN------ATLFFSSATYNINVNKILKFITAKL 248
K DD + I K LN ++ + +SA NI VN +++T +L
Sbjct: 121 NKVDD--------KEKIVVTEEEVEKFLNENGIEKSSFYMTSAKDNICVNDSFEYLTRRL 172
Query: 249 FD 250
D
Sbjct: 173 ID 174
>gi|344228933|gb|EGV60819.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 203
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G +I +W+ G
Sbjct: 14 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQVWDTAGQE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V WYQ + N+ A ++G K DD
Sbjct: 74 RFRTITTAYYRGAMGIVLIYDVTDARSFENVDNWYQTVTQHANEDAQIFLVGNKCDDSEG 133
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + Q + A LN +SA NINV+ I
Sbjct: 134 RQVSTE-----QGQELAARLNIPFLEASAKSNINVDSIF 167
>gi|170058469|ref|XP_001864935.1| ras-related protein Rab [Culex quinquefasciatus]
gi|167877567|gb|EDS40950.1| ras-related protein Rab [Culex quinquefasciatus]
Length = 203
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + G++ +T+++ G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLIRFSDNTFSGSYITTIGVDFKIRTVVINGERVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW Q+ +++G K DD
Sbjct: 69 RFRTITNTYYRGTHGVIVVYDVTNGESFANVKRWLQEIESNCDVVNKVLVGNKNDD---- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
P + + I + +AK ++ LF +SA N+NV ++ IT ++
Sbjct: 125 P-NRKVVITEDSDRFAKQMDIQLFETSAKDNLNVEEMFLAITEQVL 169
>gi|427793833|gb|JAA62368.1| Putative rab subfamily protein of small gtpase, partial
[Rhipicephalus pulchellus]
Length = 343
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 66 RPSLCHSHRHLDADNLVA-LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKT 124
RPS ++ A A LK+ +LG+ H+GKTS L +Y E+ G T
Sbjct: 119 RPSCVLQRANMSAKLQTADLKVIILGESHVGKTSLLVRYFEKRFEEFPKATLGATF---T 175
Query: 125 LLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVI-RWYQQARK 183
L RG + + +IW+ G + C+++ + FD+TSR + K+++ R+ Q
Sbjct: 176 LKTRG-KHNIAIWDTAGQERYVGMSIFYCRNADVAIMAFDVTSRESFKALMTRYVQLLSM 234
Query: 184 CNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALN-------ATLFFSSATYNIN 236
+ A+ +++GTK D L + ++A +AK+LN A F +S+ N
Sbjct: 235 VDDFALKVVVGTKSD---LLGTKKRQVSVAEAEVFAKSLNPGLTAEKAPYFETSSATGEN 291
Query: 237 VNKILKFI 244
++++ +I
Sbjct: 292 IDQVFDYI 299
>gi|148226134|ref|NP_001088189.1| uncharacterized protein LOC495014 [Xenopus laevis]
gi|54035216|gb|AAH84101.1| Rab40 protein [Xenopus laevis]
gi|156720195|dbj|BAF76738.1| Rab40 GTPase [Xenopus laevis]
Length = 286
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E S G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGASESPYSYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
Q QAR+YA+ T F S N NV +
Sbjct: 131 AFKRQ-VPTEQARSYAEKNGMTFFEVSPLCNFNVTE 165
>gi|350426704|ref|XP_003494518.1| PREDICTED: ras-related protein RabJ-like [Bombus impatiens]
Length = 220
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI +LG +GKTS + Y+G +P G + L ++ I IW+ G +
Sbjct: 6 KIVILGSQGVGKTSMIMHYIGKTYNGQVNPTIGALFFNCKLNIQDTGIMLRIWDTAGQER 65
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQL 203
+ P+ +++ A + +FDLT T ++ RW + R+ + A+ + +IG K D
Sbjct: 66 FRSMAPMYYRNANAAMLVFDLTQYNTFAAMKRWVTELRRNVEEALVLAVIGNKSD----- 120
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
I+ + A + R YA + A+ +S + + + L +P T
Sbjct: 121 LIEKRQVNAEEGRLYATKIGASYHETSVLQGEGIENVFLTVARGLLGLPST 171
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI ++GD +GK++ L ++ +E + G++ K++ + I+ W+ G
Sbjct: 10 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQCWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + + ++ + ++D+TS+ + K+V RW + R+ ++ I I ++G K D +
Sbjct: 70 RFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVGNKSDLEMS 129
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+ + +A+A+A++ + +SA + NVN+ + + +F++
Sbjct: 130 REVPTK-----EAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNL 173
>gi|307184090|gb|EFN70625.1| Ras-related protein Rab-39B [Camponotus floridanus]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L+ + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + +W +AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLIYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + +ARA+A +SA INV + + +T ++++ T E +
Sbjct: 128 LVTNGGRREVSKEEARAFADEHGVHHIETSAKTGINVEEAFRAVTQEVYNRIQTGEYKVE 187
Query: 261 IG 262
G
Sbjct: 188 DG 189
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L ++ +E + G+ + + + G I IW+ G
Sbjct: 15 FKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFD 198
+ + + ++ L ++D+T R + SV RW ++ + C+ TA +++G K D
Sbjct: 75 RFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCD 130
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV-RGARISYSIWEV 139
L+ K+ L+GD +GK+S L +Y D E S G++ K + V G +I SIW+
Sbjct: 9 LINFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDT 68
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC--NQTAIPIIIGTKF 197
G + + P + S A +F++D+ +R + ++ W ++ + N I +++G K
Sbjct: 69 AGQERFRTLTPNVYRGSHAAVFVYDVANRESFDNLKIWMEELKTYSDNPNMIKLLVGNKI 128
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D +L + +A+ N +SA + VN++ I K+F+
Sbjct: 129 DSVPRL------ISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFN 175
>gi|432898518|ref|XP_004076541.1| PREDICTED: ras-related protein Rab-6A-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D + + AK +N +SA NV ++ + + A L
Sbjct: 130 ----LADKRQITTEEGEQRAKEMNVLFIETSAKTGYNVKQLFRRVAAAL 174
>gi|429327077|gb|AFZ78867.1| Ras-related protein [Coptotermes formosanus]
Length = 207
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
++K+ L+GD +GKTS + +Y+ D+ G++ K L + G ++ +W+ G
Sbjct: 13 SIKLILIGDSSVGKTSLIMRYIDDKFSPNNLSTIGVDFKTKYLEIDGHQVKVQVWDTAGQ 72
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFI 201
+ + ++S IL +FDLT+R T V W Q + A+ +I+ G K
Sbjct: 73 EQFRAITRAYYRNSNGILIVFDLTNRETFNQVKVWLQSIHDVSVDAVDVILCGNK----- 127
Query: 202 QLPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKIL 241
+DL+ ++ + +A + F +S N +N++
Sbjct: 128 ---VDLERAVSREEVEEFASLSSVPYFETSCKLNTGINEMF 165
>gi|307176945|gb|EFN66251.1| Ras-related protein Rab-3 [Camponotus floridanus]
Length = 258
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 57 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 116
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D
Sbjct: 117 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWITQIKNYSWDNAQVILVGNKCD---- 172
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILK 242
++ + I+S+ + A+ L F +SA NINV + +
Sbjct: 173 --MEEERVISSERGKQLAEQLGVRFFETSAKENINVKAVFE 211
>gi|410076036|ref|XP_003955600.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
gi|372462183|emb|CCF56465.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
Length = 206
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 12 MKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ N A +++G K D
Sbjct: 72 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNDHANDDAQLLLVGNKSD---- 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL---------KFITAKLFDIPW 253
+D + Q A AK L SSA + NVN+I K + KL D
Sbjct: 128 --MDTRLVTYEQGEALAKELGLPFVESSAKDDQNVNEIFFTLARLIQDKIDSNKLSDAKN 185
Query: 254 TLERNLTI 261
T + N+ I
Sbjct: 186 TNDGNVNI 193
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GKT L ++ DE G+ +TL + R+ IW+ G
Sbjct: 31 FKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWDTAGQE 90
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ + ++D+T R T ++V RW ++ R + + + +IG K D
Sbjct: 91 RYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKAD---- 146
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+P + A +A +A+ LFFS A+ N F+T
Sbjct: 147 MPASRREVAADEAARFAE--EQGLFFSEASALSGDNVERAFLT 187
>gi|383854082|ref|XP_003702551.1| PREDICTED: ras-related protein Rab-3-like [Megachile rotundata]
Length = 264
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 16/209 (7%)
Query: 37 IRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGK 96
+R RM ++ SP +P P + + D + K+ ++G+ +GK
Sbjct: 22 MRTRMARMMSIVEISPQ----NRLPMAGQDPKMQKEAADQNFDYM--FKLLIIGNSSVGK 75
Query: 97 TSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDS 156
TSFL +Y D G++ KT+ R+ IW+ G + + + +
Sbjct: 76 TSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGA 135
Query: 157 IAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPIIIGTKFDDFIQLPIDLQWTIA-S 213
+ + M+D+T+ + SV W Q + C+ + I++G K D +D + I+
Sbjct: 136 MGFILMYDITNEESFNSVQDWVTQIKTYSCDNAQV-ILVGNKCD------MDEERVISFE 188
Query: 214 QARAYAKALNATLFFSSATYNINVNKILK 242
+ + A L F +SA NIN+ + +
Sbjct: 189 RGKQLADQLGVQFFETSAKENINIKTVFE 217
>gi|24641152|ref|NP_727472.1| Rab at 9Fb [Drosophila melanogaster]
gi|22832069|gb|AAN09277.1| Rab at 9Fb [Drosophila melanogaster]
gi|90855733|gb|ABE01228.1| IP08727p [Drosophila melanogaster]
gi|220952298|gb|ACL88692.1| Rab9Fb-PA [synthetic construct]
gi|220958860|gb|ACL91973.1| Rab9Fb-PA [synthetic construct]
Length = 214
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI +LGD +GK+ L ++ + + G++ + + + G + IW+ GD
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + LP + + IL ++D+TS + +++ W ++ R+ + ++ + ++G K DD
Sbjct: 68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDN 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ ++ Q YA + SA NVN + ++ +++
Sbjct: 128 RQVRME-----QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>gi|115495915|ref|NP_001070133.1| ras-related protein Rab-21 [Danio rerio]
gi|115313619|gb|AAI24523.1| Zgc:154045 [Danio rerio]
gi|182891700|gb|AAI65035.1| Zgc:154045 protein [Danio rerio]
Length = 216
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 10 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 70 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 129
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTI 261
+ + ++ +A YA+++ A + +SA N + ++ + ++ + ER+
Sbjct: 130 ERHVSVE-----EAEGYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAQLEERSRGN 184
Query: 262 G 262
G
Sbjct: 185 G 185
>gi|195120790|ref|XP_002004904.1| GI20173 [Drosophila mojavensis]
gi|193909972|gb|EDW08839.1| GI20173 [Drosophila mojavensis]
Length = 220
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 142 RVISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>gi|145534476|ref|XP_001452982.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834215|emb|CAI44484.1| rab_A75 [Paramecium tetraurelia]
gi|124420682|emb|CAK85585.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D + P G++ + KTL I +W+
Sbjct: 12 LSKYKLVFLGDQSVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYEDRTIRLQLWDTA 71
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + +D+ + + SV +W + R + I ++ K
Sbjct: 72 GQERFRSLIPSYIRDSAVAVVCYDVEVKQSFDSVAKWIEDVRLERGNDVIIFLVANK--- 128
Query: 200 FIQLPIDLQWTIAS--QARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
IDL+ + S Q A AK +A SA NV + K I A L
Sbjct: 129 -----IDLENRVVSTEQGAALAKEQDAHFIEVSAKSGSNVELLFKQIAATL 174
>gi|168988599|pdb|2EFC|B Chain B, Ara7-GdpATVPS9A
gi|168988601|pdb|2EFC|D Chain D, Ara7-GdpATVPS9A
gi|168988603|pdb|2EFD|B Chain B, Ara7ATVPS9A
gi|168988605|pdb|2EFD|D Chain D, Ara7ATVPS9A
gi|168988607|pdb|2EFE|B Chain B, Ara7-Gdpnh2ATVPS9A
gi|168988609|pdb|2EFE|D Chain D, Ara7-Gdpnh2ATVPS9A
gi|168988611|pdb|2EFH|B Chain B, Ara7-GdpATVPS9A(D185N)
gi|168988613|pdb|2EFH|D Chain D, Ara7-GdpATVPS9A(D185N)
gi|453056092|pdb|4G01|B Chain B, Ara7-gdp-ca2+/vps9a
Length = 181
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 74 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD----- 128
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+D + A A+ YA+ LFF +SA NV +I I +L
Sbjct: 129 LLDARKVTAEDAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 173
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L ++ +E G+ +TL V G + IW+ G
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + ++ L ++D+T R T ++V+RW ++ R + I I++ D L
Sbjct: 73 RYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHL 132
Query: 204 PIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++A + R+ A+ + +SA N+ K + I ++++ I
Sbjct: 133 R-----SVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHI 176
>gi|156088339|ref|XP_001611576.1| Ras family protein [Babesia bovis]
gi|154798830|gb|EDO08008.1| Ras family protein [Babesia bovis]
Length = 227
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI LLG+ + GKTS + ++V D + G++ + K + V G + +W+ G
Sbjct: 21 IKIVLLGEQNTGKTSIVTRFVYDHFVPAYAATIGIDFLSKVVTVNGKTMRLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
+ + +P +DS A + ++D+TS + + V W + ++ AI +I+G K D
Sbjct: 81 RFRTLMPSYIRDSSAAIVVYDITSPESFEKVKDWIKDIKELRGDKAIIMIVGNKTD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+D + + AK L +SA N+N + ++ +L
Sbjct: 137 -LLDKRKVSYDEGEEEAKKLECLFCETSAKNGDNINDLFNTVSTELM 182
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + ++A + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRI 175
>gi|402902666|ref|XP_003914219.1| PREDICTED: ras-related protein Rab-12 [Papio anubis]
Length = 247
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 46 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 105
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 106 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 165
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 166 REISRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 218
>gi|383861916|ref|XP_003706430.1| PREDICTED: ras-related protein Rab-39B-like [Megachile rotundata]
Length = 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLRYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + +W +AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + +ARA+A +SA INV + + +T ++++ T E +
Sbjct: 128 LVTNGGRREVSKEEARAFADQHGVHHIETSAKTGINVEETFRTVTQEVYNRIQTGEYKVE 187
Query: 261 IG 262
G
Sbjct: 188 DG 189
>gi|298714399|emb|CBJ27456.1| RTW, Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 202
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
LK+ LLGD +GK+ +E+Y+ DE L + K L G + W+ G
Sbjct: 24 LKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKVDFWDTAGQ 83
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ 202
+ P + A + +FD+T + T K++ WY + R+ +++ ++I K
Sbjct: 84 ERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANK------ 137
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
ID+ + + ++ +A+ + FF SA NV K
Sbjct: 138 --IDVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAF 174
>gi|123392739|ref|XP_001300294.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736296|gb|AAX97477.1| small Rab GTPase RabF2 [Trichomonas vaginalis]
gi|121881309|gb|EAX87364.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 193
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+G H GKTS +++YV + K +++ G + IW+ G +
Sbjct: 9 KVVLVGTTHTGKTSIVQRYVNGQFMINSVSSMQAAFFQKNVMIGGKEQTLEIWDTAGQER 68
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFD-DFIQ 202
+ P+ +D+ + +FD+T + +W + + +I +++G K D +FI+
Sbjct: 69 FRSLTPMYYRDARVAIVVFDITDANSFSKAKQWINELKSSRGDSISLVLVGNKSDLEFIR 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ S+A+ YAK L+ F +SA +N+ ++
Sbjct: 129 V------VQMSEAKQYAKLLDIPYFETSAKTGVNIEEVF 161
>gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|374110173|gb|AEY99078.1| FAGR257Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L KI LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 10 LSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTVYLDDRTIRLQLWDTA 69
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPIIIGTKFD 198
G + + +P +DS + ++D+T++ + + + +W + R + + I I+G K D
Sbjct: 70 GQERFRSLIPSYIRDSHVAIVVYDITNKKSFEYIDKWVEDVRNERGEENLILCIVGNKSD 129
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSAT-YNINVNKILKFITAKLF 249
+D + + AK LNA +F ++T NV + K I AKL
Sbjct: 130 -----LVDERKVTVEEGENKAKLLNAKIFVETSTKAGFNVGALFKRI-AKLL 175
>gi|126328814|ref|XP_001373156.1| PREDICTED: ras-related protein Rab-39A-like [Monodelphis domestica]
Length = 219
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE----GLNMMDKTL-LVRGARISYSIWE 138
+I LLGD +GKTS L++Y+ E + G P G+ + L L G RI W+
Sbjct: 14 FRILLLGDADVGKTSLLQRYI--EGDFGADPPPSSTVGVEFYSRMLQLASGPRIKLQFWD 71
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ--ARKCNQTAIPIIIGTK 196
GD + + ++++ +L +FD+T+R + V WYQ+ + + + + +++G K
Sbjct: 72 TAGDERYRSITRSFYRNTVGVLLVFDVTNRKSFNHVEDWYQEVASVQGSDKVVFLLVGHK 131
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE 256
D + Q +A A + +SA N NV L F T + +I +L+
Sbjct: 132 CDLQQARQVSTQ-----EAETLAAVWGMSFLETSAKTNSNVT--LAFETL-VHEIQQSLQ 183
Query: 257 RNLTIGEPIID 267
R GE +D
Sbjct: 184 R----GEIKVD 190
>gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioides immitis RS]
gi|303321211|ref|XP_003070600.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110296|gb|EER28455.1| Ras-related protein ypt5, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035923|gb|EFW17863.1| GTP-binding protein ypt5 [Coccidioides posadasii str. Silveira]
gi|392866497|gb|EJB11129.1| GTP-binding protein ypt5 [Coccidioides immitis RS]
Length = 217
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
P D + + A AYA+ F +SA + NV ++ I KL
Sbjct: 138 DSP-DKRAVQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL 183
>gi|426254019|ref|XP_004020685.1| PREDICTED: ras-related protein Rab-12 [Ovis aries]
Length = 430
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 229 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 288
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 289 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 348
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 349 REISRQ-----QGEKFAQQIAGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDMLRN 401
>gi|196015793|ref|XP_002117752.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
gi|190579637|gb|EDV19728.1| hypothetical protein TRIADDRAFT_61818 [Trichoplax adhaerens]
Length = 209
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GKTS + +Y ++ + + ++K L + G RI+ +IW+ G
Sbjct: 10 FKVVLLGEGCVGKTSIVLRYCENKFNEKHLSTLQASYLEKKLNIGGKRINLAIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ P+ ++S + ++D+T + V +W ++ RK I + I+G K D
Sbjct: 70 RFHALGPIYYRESHGAILVYDITDEDSFMKVKKWVKELRKMLGNEICLCIVGNKID---- 125
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
L D + ++A YA+++ A F +SA N + ++ +T ++
Sbjct: 126 LEKDRTVHV-TRAEDYAQSVGAVHFHTSAKMNKGIEEVFLNLTKRML 171
>gi|452847264|gb|EME49196.1| hypothetical protein DOTSEDRAFT_68068 [Dothistroma septosporum
NZE10]
Length = 224
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKADLVA 138
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYAK N F +SA NV ++ I KL
Sbjct: 139 EQP-DKRAVPTTDAEAYAKEANLLFFETSAKTAENVKELFTAIAKKL 184
>gi|195429579|ref|XP_002062835.1| GK19661 [Drosophila willistoni]
gi|194158920|gb|EDW73821.1| GK19661 [Drosophila willistoni]
Length = 220
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 142 RVISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>gi|168066679|ref|XP_001785261.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
gi|162663131|gb|EDQ49913.1| Rab6/RabH-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 15 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 74
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+++R + + RW ++ R + I +++G K D
Sbjct: 75 GQERFRSLIPSYIRDSSVAVVVYDVSNRQSFLNTARWVEEVRTERGSDVIIMLVGNKTD- 133
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + A AK +S+ N+ + + I A L
Sbjct: 134 ----LVDKRQVSIEEGDAKAKEFGVMFIETSSKAGFNIKALFRKIAAAL 178
>gi|348557356|ref|XP_003464485.1| PREDICTED: ras-related protein Rab-12-like [Cavia porcellus]
Length = 248
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 47 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 106
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D +
Sbjct: 107 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCEMD 166
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
+ Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 167 REVSRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRN 219
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GKT L ++ DE G+ +TL + R+ IW+ G
Sbjct: 23 FKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQE 82
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ + ++D+T R T ++V RW ++ R + + + +IG K D
Sbjct: 83 RYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKAD---- 138
Query: 203 LPIDLQWTIASQARAYAKALNATLFFS--SATYNINVNKILKFITAKLFDI 251
+P + A +A +A+ LFFS SA NV++ + ++F +
Sbjct: 139 MPAGRREVAADEAARFAE--EQGLFFSEASALSGDNVDRAFLTLLEEIFAV 187
>gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89270950|emb|CAJ81259.1| RAB5C, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 62 GTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMM 121
GTT RP+ + + + K+ LLG+ +GK+S + ++V + + G +
Sbjct: 5 GTTARPNGPAA-----GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 59
Query: 122 DKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ- 180
+TL + + + IW+ G + P+ + + A + ++D+T+ T W ++
Sbjct: 60 TQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTETFARAKNWVKEL 119
Query: 181 ARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNK 239
R+ + + + G K D + +D Q +A+AYA N+ LF +SA +NVN+
Sbjct: 120 QRQASPNIVIALSGNKADLSSKRAVDFQ-----EAQAYADD-NSLLFMETSAKTAMNVNE 173
Query: 240 ILKFITAKL 248
I I KL
Sbjct: 174 IFMAIAKKL 182
>gi|308510398|ref|XP_003117382.1| CRE-RAB-21 protein [Caenorhabditis remanei]
gi|308242296|gb|EFO86248.1| CRE-RAB-21 protein [Caenorhabditis remanei]
Length = 210
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GK+S + ++V ++ + KT+ + + IW+ G
Sbjct: 13 FKVVLLGEGCVGKSSLVLRFVENKFSSRHLSTIQASFQSKTVHIDDCKAELHIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
K P+ + S +L +FD+T R + + V W + + C +TA +I+G K D +
Sbjct: 73 KYHALGPIYYRGSNGVLLVFDITDRRSFEKVKNWVLEIKTCLGKTAEILIVGNKIDLEDE 132
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ Q A YA+ A +SA N+ ++ + +T+K+ D
Sbjct: 133 RQVSRQ-----DAEVYAETEGALYMETSAQENMGISDAFEALTSKMID 175
>gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
gi|119399845|gb|EAW10271.1| RAB GTPase Ypt5, putative [Aspergillus clavatus NRRL 1]
Length = 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ + + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYA+ F +SA + NV ++ I KL
Sbjct: 138 ENP-DKRAIQTADAEAYAREAGLLFFETSAKTSTNVRELFTAIAKKL 183
>gi|106507168|ref|NP_077768.2| ras-related protein Rab-12 [Mus musculus]
gi|122065941|sp|P35283.3|RAB12_MOUSE RecName: Full=Ras-related protein Rab-12; AltName: Full=Rab-13
gi|112292983|dbj|BAF02869.1| Rab12 [Mus musculus]
gi|157170004|gb|AAI52767.1| RAB12, member RAS oncogene family [synthetic construct]
Length = 243
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 101
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 102 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 161
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 162 REISRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRN 214
>gi|56967660|gb|AAW31979.1| CG2532 [Drosophila melanogaster]
gi|56967672|gb|AAW31985.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI +LGD +GK+ L ++ + + G++ + + + G + IW+ GD
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + LP + + IL ++D+TS + +++ W ++ R+ + ++ + ++G K DD
Sbjct: 68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDN 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ ++ Q YA + SA NVN + ++ +++
Sbjct: 128 RQVRME-----QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + + L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|85115075|ref|XP_964811.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|28926605|gb|EAA35575.1| Rab5-like protein ypt5 [Neurospora crassa OR74A]
gi|38636468|emb|CAE82003.1| probable GTP-binding protein ypt5 [Neurospora crassa]
gi|350295957|gb|EGZ76934.1| putative GTP-binding protein ypt5 [Neurospora tetrasperma FGSC
2509]
Length = 220
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSI 136
+ K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + I
Sbjct: 14 GNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTIALDENTTVKFEI 73
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGT 195
W+ G + + P+ +++ + ++D+T +L W ++ R+ N+ I + G
Sbjct: 74 WDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAGN 133
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
K D +Q D + + A+AYAK F +SA NV + I KL
Sbjct: 134 KL-DLVQEQPDKRAIQTADAQAYAKEAGLLFFETSAKTAENVQNLFTEIAKKL 185
>gi|123412155|ref|XP_001304007.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121885429|gb|EAX91077.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 195
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSP--GEGLNMMDKTLLVRGARISYSI 136
D ++ +I +GD +GKTS + + P G G+N +D + V G IS+
Sbjct: 3 DEELSPRIIAVGDSGVGKTSLIHRIKSGTFLDQTVPTIGAGVNPID--VEVDGKVISFQF 60
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGT 195
W+ G ++ +P+ K +IA + +F + + K+V W Q R+ ++ I +I+G
Sbjct: 61 WDTAGQEMYRNIIPIYYKGAIAAVVVFSMEDPNSFKNVDMWLHQIRENSSENIIIVIVGN 120
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
K D +P+ + A+ +AK+ T+FF+SA N I + I
Sbjct: 121 KTD---AIPLAIS---EDDAKKWAKSNGYTIFFTSAKTGQNTALITQHI 163
>gi|431896332|gb|ELK05748.1| Ras-related protein Rab-12 [Pteropus alecto]
Length = 246
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 45 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 104
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 105 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLD---- 160
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
D + T Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 161 CETDREIT-KQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 217
>gi|340709811|ref|XP_003393494.1| PREDICTED: ras-related protein Rab-39B-like [Bombus terrestris]
gi|350410358|ref|XP_003489019.1| PREDICTED: ras-related protein Rab-39B-like [Bombus impatiens]
Length = 218
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L+ + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + +W +AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + +ARA+A +SA +NV + + +T ++++ T E +
Sbjct: 128 LVTNGSRREVSKEEARAFADQHGVHHIETSAKTGVNVEEAFRTVTQEVYNRIQTGEYKVE 187
Query: 261 IG 262
G
Sbjct: 188 DG 189
>gi|156121229|ref|NP_001095762.1| ras-related protein Rab-12 [Bos taurus]
gi|151554332|gb|AAI49543.1| RAB12 protein [Bos taurus]
Length = 244
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 103 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 162
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 163 REISRQ-----QGEKFAQQIAGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDMLRN 215
>gi|145515727|ref|XP_001443763.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411152|emb|CAK76366.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI+ LG+ +GK+S +++Y +E ++ G + + K + + +I IW+ G
Sbjct: 5 IKITFLGNSGVGKSSIVKRYCFEEFDEHNQSNLGADYVPKEMEYQNNKIKLQIWDTAGQE 64
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
K + +P+ +++ A++ ++D+T + + + W + C++ + ++G K D +
Sbjct: 65 KFRSLVPLFLRNAQAVIIVYDITQKSSFTQLKEWVSSLEQICSKNQLFFLVGNKCDLIEQ 124
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLE-RNL 259
Q+ D + + Y + L A L ++S N + ++ + I + L+ + L
Sbjct: 125 EQVTYDEAKQYSYVQQPYIQNLKAPLQYTSCKNNEGIQELFQKIVEEYLKQEEELKNKEL 184
Query: 260 TIGE 263
I E
Sbjct: 185 LINE 188
>gi|126335536|ref|XP_001367034.1| PREDICTED: ras-related protein Rab-26-like [Monodelphis domestica]
Length = 261
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGS--PGE 116
L+PG RPSL S D VA K+ L+GD +GKT L ++ D G+
Sbjct: 51 LLPG---RPSLSSSGDFYD----VAFKVMLVGDSGVGKTCLLVRF-KDGAFLAGTFISTV 102
Query: 117 GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR 176
G++ +K L V G ++ IW+ G + + +D+ A+L ++D+T+R + ++
Sbjct: 103 GIDFRNKVLNVDGVKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNRASFDNIQA 162
Query: 177 WYQQARKCNQT-AIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNI 235
W + + Q + +++G K D + + + AK +SA +
Sbjct: 163 WLTEIHEYAQKDVVLMLLGNKVDSTQERVVKRE-----DGEKLAKEYGVPFMETSAKTGL 217
Query: 236 NVNKILKFITAKL 248
NV+ K I +L
Sbjct: 218 NVDLAFKAIAKEL 230
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ L+GD +GK+ L ++V D+ G++ +T+ + G RI +W+ G
Sbjct: 14 LKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIEIDGKRIKLQVWDTAGQE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + + I+ ++D+T T ++V W+Q + N+ I++G K D+
Sbjct: 74 RFRTITTAYYRGATGIILVYDVTDERTFENVRNWFQTVHQHANEDTQLILVGNKNDE--- 130
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
DL+ + + + A+ L +SA N NV+++ F AK+
Sbjct: 131 --KDLRAVSSERGESLAQELGIPFLEASAKTNDNVDELF-FKLAKI 173
>gi|395819496|ref|XP_003783119.1| PREDICTED: rab-like protein 2B isoform 2 [Otolemur garnettii]
Length = 238
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 62 GTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMM 121
G ++P ++ DAD+ V KI LGD +GK+ +E+++ D + L +
Sbjct: 3 GDRIKPCELDQEKY-DADDNV--KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLY 59
Query: 122 DKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA 181
T V G I W+ G + Q + A + +FD+ + T K++ WY +
Sbjct: 60 KHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYKNLSTWYTEL 119
Query: 182 RKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI- 240
R+ I++ K DD + ++ +A+ + L+F SA NV K+
Sbjct: 120 REFRPEIPCIVVANKIDDI---------KVTQKSFNFARKFSLPLYFVSAADGTNVVKVW 170
Query: 241 -LKFITAKLFD 250
+T++LF+
Sbjct: 171 WATEVTSQLFN 181
>gi|322795122|gb|EFZ17962.1| hypothetical protein SINV_05258 [Solenopsis invicta]
Length = 219
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ +LG +GKTS + +Y+G+ + SP G + + + + +I +W+ G +
Sbjct: 7 KVVMLGSQGVGKTSLIGRYLGNFEH--ASPTIGASFFNCKINLDDMKIKLQVWDTAGQER 64
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ P+ ++S A + +FDLT T ++ W ++ ++ +T + +IG K D Q
Sbjct: 65 FRSMAPMYYRNSNAAMLVFDLTQYNTFAAIKSWVKELQQNVEETMVLALIGNKSDLVQQR 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + + YA + AT S +N V + I L
Sbjct: 125 QVD-----GEEGQRYATTIGATYHEISVLHNEGVESVFLAIAMSL 164
>gi|196010960|ref|XP_002115344.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
gi|190582115|gb|EDV22189.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
Length = 207
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + + G++ +T+ V G RI IW+ G
Sbjct: 10 FKLLIIGDSGVGKSSILLRFADNLFQGTYITTIGVDFKIRTIEVDGQRIKLQIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+TS T +V RW + + + A +++G K D
Sbjct: 70 RFRTITSTYYRGTHGVIVVYDVTSGETFVNVKRWLMEIDQNCEVANRVLVGNKCD----- 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+D + + A+ +A+ + LF +SA NIN+ + IT
Sbjct: 125 CLDKKLVSTADAKKFAEQMGIQLFEASAKDNINIEDVFTAIT 166
>gi|117939077|dbj|BAF36692.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 205
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 90 GDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHL 149
GD +GKTS L +++ D E P G++ + K++ + + +W+ G K + L
Sbjct: 1 GDQGVGKTSILSRFMFDSFESNYLPTIGIDFLTKSMYLDHQTVRLQLWDTAGQEKFRSLL 60
Query: 150 PVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQLPIDLQ 208
P +D A + +FD+T+R + + + W R N + +I+G K D D +
Sbjct: 61 PNYIRDCAAAVIVFDVTNRLSYEHLEGWINDVRNGVNDNVVLMIVGNKTD-----LEDKR 115
Query: 209 WTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+ + + A AL +SA NV + K I L ++
Sbjct: 116 QVTSEELQEKANALCCLSTEASAKAGYNVKNVFKKIAVTLLNV 158
>gi|56967662|gb|AAW31980.1| CG2532 [Drosophila melanogaster]
gi|56967664|gb|AAW31981.1| CG2532 [Drosophila melanogaster]
gi|56967668|gb|AAW31983.1| CG2532 [Drosophila melanogaster]
gi|56967674|gb|AAW31986.1| CG2532 [Drosophila melanogaster]
gi|56967676|gb|AAW31987.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI +LGD +GK+ L ++ + + G++ + + + G + IW+ GD
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + LP + + IL ++D+TS + +++ W ++ R+ + ++ + ++G K DD
Sbjct: 68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDN 127
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+ ++ Q YA + SA NVN + ++ +++
Sbjct: 128 RQVRME-----QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
>gi|71404283|ref|XP_804862.1| ras-related protein Rab21 [Trypanosoma cruzi strain CL Brener]
gi|70868037|gb|EAN83011.1| ras-related protein Rab21, putative [Trypanosoma cruzi]
Length = 232
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDE-KEQGGSPGEGLNMMDKTLLVR-GARISYSIW 137
++ +KI +LG+ +GKTS L+++V D +E+ S + + T+ V GAR SIW
Sbjct: 4 DITNMKIVMLGEGRVGKTSLLQRFVSDSFEEECESTTKASMYANVTVTVSDGARAKLSIW 63
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC--NQTAIPIIIGT 195
+ G + P+ +D+ + ++D+T + V W ++ ++ NQ +++G
Sbjct: 64 DTAGQERYHALGPIYYRDAQGAILVYDITDYESFLKVKIWLKELQQVVGNQNISVVVVGN 123
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
K D Q + ++ +A +A NA + SA ++++++ I +F
Sbjct: 124 KIDLERQRRVTVK-----EAEEWANQQNAKHYNVSAKLSLHISEPFNGIATSVF 172
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK++ L +Y +E G+ +++ + G + IW+ G
Sbjct: 14 FKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTAGQE 73
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFD--DF 200
+ + + + L ++D+T R T +V RW Q+ + T + +++G K D D
Sbjct: 74 RFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDLGDI 133
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
Q+P++ + +A A+A +SA NV + + +++
Sbjct: 134 RQVPVE-------EGKALAEAEGLFFMETSALDATNVRTAFEIVIREIY 175
>gi|29841146|gb|AAP06159.1| similar to NM_078963 GTP-binding protein rab3A in Drosophila
melanogaster [Schistosoma japonicum]
gi|226480624|emb|CAX73409.1| Rab-protein 8 [Schistosoma japonicum]
Length = 216
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ + R+ IW+ G
Sbjct: 16 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTIFRQDKRVKLQIWDTAGQE 75
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + +V W Q + + A +++G K D
Sbjct: 76 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWVTQIKTYSWDNAQVVLVGNKCD---- 131
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
+D + + R A L F +SA NINV + +
Sbjct: 132 -LVDDRVVSVDRGRHLAHQLGLEFFEASAKENINVKNVFE 170
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 13 KFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFD--DFI 201
+ + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 73 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLR 132
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 133 AVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|440912506|gb|ELR62068.1| Ras-related protein Rab-22A, partial [Bos grunniens mutus]
Length = 182
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 91 DCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLP 150
D +GK+S + ++V D + +P G + M KT+ + + IW+ G + + P
Sbjct: 1 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAP 60
Query: 151 VACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWT 210
+ + S A + ++D+T T ++ W ++ R+ I + I D ID++
Sbjct: 61 MYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL----IDVREV 116
Query: 211 IASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 117 MERDAKDYADSIHAVFVETSAKNAININELFIEISRRI 154
>gi|124504338|gb|AAI28721.1| Rab40c, member RAS oncogene family [Rattus norvegicus]
Length = 281
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + +
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKR 134
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
+ ++ QARAYA+ T F S N NV
Sbjct: 135 QVPME-----QARAYAEKNCMTFFEVSPLCNFNV 163
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 86 ISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKA 145
+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 146 QDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFIQ 202
+ + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 121 VPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 162
>gi|407409243|gb|EKF32227.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi
marinkellei]
Length = 283
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+V KI LLGD +GKTS + +++ D +Q G++ KT+ V + +W+
Sbjct: 39 VVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTA 98
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P ++S + ++D+TSR + +W + R ++ I ++G K D
Sbjct: 99 GQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKSD- 157
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ + +A+ A+ N SA NV + + + A+L +P
Sbjct: 158 ----AQEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKM-AELLPLP 205
>gi|403337670|gb|EJY68057.1| Rab6 [Oxytricha trifallax]
gi|403366411|gb|EJY83007.1| Rab6 [Oxytricha trifallax]
Length = 235
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
KI LGD +GKTS + ++ D + G++ + KT+ V + +W+ G +
Sbjct: 15 KIVFLGDQSVGKTSLILRFTQDTFDGNYQATIGIDFLSKTMYVDDKMVRLQLWDTAGQER 74
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFIQL 203
+ +P KDS + ++D+T++ + +V +W A+ + II +G K D
Sbjct: 75 FRSLIPSYIKDSSVAVVVYDITNKFSFTNVQKWIDDAKAIRGNDLLIILVGNKID----- 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + + +A AK L +SA IN+ ++ + + L
Sbjct: 130 MAEKRQVGTEEGQALAKELGVMFIETSAKAGINIRQLFQNLATSL 174
>gi|354478791|ref|XP_003501598.1| PREDICTED: ras-related protein Rab-26-like, partial [Cricetulus
griseus]
Length = 234
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 43 PRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEK 102
PR+ P P L +G P + RPSL S D VA K+ L+GD +GKT L +
Sbjct: 9 PRTA--RPGPEALPNG--PPQSGRPSLGGSGDFYD----VAFKVMLVGDSGVGKTCLLVR 60
Query: 103 YVGDEKEQGGSPGE-----GLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSI 157
+ K+ G G++ +K L V G ++ IW+ G + + +D+
Sbjct: 61 F----KDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAH 116
Query: 158 AILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQLPIDLQWTIASQAR 216
A+L ++D+T++ + ++ W + ++ Q + +++G K D + + +
Sbjct: 117 ALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKRE-----DGE 171
Query: 217 AYAKALNATLFFSSATYNINVNKILKFITAKL 248
AK +SA +NV+ I +L
Sbjct: 172 KLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 203
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R D + K+ L+GD +GK++ L ++ +E G+ +TL V G +
Sbjct: 3 RRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPII 192
IW+ G + + + ++ L ++D+T T ++V RW ++ R + + ++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIML 122
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
IG K D L+ A+ YA+ + +SA NV K + I ++++ I
Sbjct: 123 IGNKTD-----LKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRI- 176
Query: 253 WTLERNLTIGEP 264
+++LT EP
Sbjct: 177 -ISKKSLTSEEP 187
>gi|391344946|ref|XP_003746755.1| PREDICTED: ras-related protein Rab-35-like [Metaseiulus
occidentalis]
Length = 203
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + G++ +T+ V G R+ IW+ G
Sbjct: 8 FKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTIEVDGERVKLQIWDTAGQE 67
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW + + I++G K DD +
Sbjct: 68 RFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIDQNCDVVNRILVGNKNDDPQRK 127
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+ + A+A+A +N LF +SA N NV ++ +T
Sbjct: 128 VV-----LTEDAQAFADRMNIELFETSAKDNFNVEEMFNAVT 164
>gi|384945738|gb|AFI36474.1| ras-related protein Rab-12 [Macaca mulatta]
Length = 246
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 45 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 104
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 105 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 164
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 165 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 217
>gi|322785382|gb|EFZ12055.1| hypothetical protein SINV_03176 [Solenopsis invicta]
gi|332019048|gb|EGI59580.1| Ras-related protein Rab-39B [Acromyrmex echinatior]
Length = 218
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L+ + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + +W +AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + +ARA+A +SA +NV + + +T ++++ T E +
Sbjct: 128 LVTNGGRREVSKEEARAFADEHGVHHIETSAKTGVNVEEAFRTVTQEVYNRIQTGEYKVE 187
Query: 261 IG 262
G
Sbjct: 188 DG 189
>gi|226291514|gb|EEH46942.1| GTP-binding protein ypt5 [Paracoccidioides brasiliensis Pb18]
Length = 217
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D +
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIIIALAGNKLDLVM 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
P D + + A AYA+ F +SA NV ++ I KL
Sbjct: 138 DSP-DKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|262401089|gb|ACY66447.1| putative ras-related protein Rab [Scylla paramamosain]
Length = 197
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + G++ +TL V G R+ IW+ G
Sbjct: 5 FKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQE 64
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW + + + I++G K D
Sbjct: 65 RFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCEVVNRILVGNKND----C 120
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
P D + + A+ +A + +LF +SA NINV ++ +T
Sbjct: 121 P-DRKVVLYEDAKRFADQMTISLFETSAKDNINVEEMFTVMT 161
>gi|123397256|ref|XP_001301054.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121882183|gb|EAX88124.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 8/162 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ +GD +GK+ + KY+ + + P G + + + +RG I +IW+ G
Sbjct: 11 IKMIFIGDSSVGKSCIINKYIKGQFSEEVEPTVGASFFSREMEIRGEHIVLNIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ +P+ +++ + +FDLT + +SV W + RK CN I G K D
Sbjct: 71 AYRYLVPMYYRNADIAIVVFDLTKFESFQSVEHWVEDVRKSCNNEVSVFICGNKCD---- 126
Query: 203 LPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKF 243
+++ I+ Q +A L + +SA ++K+ F
Sbjct: 127 --LEMNRAISPEQIQAKEIELKTSCIETSALTGQGLDKLFAF 166
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GKT L ++ DE G+ +TL + R+ IW+ G
Sbjct: 23 FKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQE 82
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ + ++D+T R T ++V RW ++ R + + + +IG K D
Sbjct: 83 RYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKAD---- 138
Query: 203 LPIDLQWTIASQARAYAKALNATLFFS--SATYNINVNKILKFITAKLFDI 251
+P + A +A +A+ LFFS SA NV++ + ++F +
Sbjct: 139 MPAGRREVAADEAARFAE--EQGLFFSEASALSGDNVDRAFLTLLEEIFAV 187
>gi|401827320|ref|XP_003887752.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
gi|392998759|gb|AFM98771.1| Rab5-like GTPase [Encephalitozoon hellem ATCC 50504]
Length = 197
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ +LG +GK+S + KYV E G + + KT+ + I + IW+ G
Sbjct: 13 FKVVVLGYYSVGKSSLVLKYVKGEFNPNEESTIGASFLTKTVFTQEGSIKFEIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ +P+ + + L ++D+TS + ++ RW ++ + + I ++IG K D
Sbjct: 73 RYNSLIPMYYRGAQVALIVYDITSAESFETAKRWVEELGFEKPKEFIKVLIGNKSDLESD 132
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ Q Q + YA + N F SSA + +I I ++
Sbjct: 133 RRVEYQ-----QGKEYADSHNLLFFESSAKTGKGIAEIFNAIAERV 173
>gi|319921858|gb|ADV78543.1| small GTP binding protein Rab5 [Oryza sativa Indica Group]
Length = 203
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V + + G +TL V + + IW+ G +
Sbjct: 13 KLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 72
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + ++D+T+ + +W Q+ + + N I + G K D
Sbjct: 73 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALAGNKAD----- 127
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKLFD 250
I+ + A +AR YA+ LFF +SA INVN + I +L
Sbjct: 128 MIEARQVPAEEARTYAQ--ENGLFFMETSAKTAINVNDVFHEIAKRLLQ 174
>gi|307192501|gb|EFN75689.1| Ras-related protein Rab-39B [Harpegnathos saltator]
Length = 218
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L+ + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + +W +AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMEARRHIEPHRPVFALVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + +ARA+A +SA +NV + + +T ++++ T E +
Sbjct: 128 LVTNGGRREVSKEEARAFADEHGVHHIETSAKTGVNVEEAFRTVTQEVYNRIQTGEYKVE 187
Query: 261 IG 262
G
Sbjct: 188 DG 189
>gi|395857340|ref|XP_003801056.1| PREDICTED: ras-related protein Rab-12 [Otolemur garnettii]
Length = 234
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 33 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 92
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 93 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCEAD 152
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 153 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 205
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 10/172 (5%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
A + L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 19 AQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--D 199
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 79 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 138
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 139 LRAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 183
>gi|323309243|gb|EGA62464.1| Sec4p [Saccharomyces cerevisiae FostersO]
Length = 186
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
++ + A Q A AK L SSA + NVN+
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNE 171
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L ++ DE + G+ + + + G + IW+ G
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + + L ++D+T T +SV RW Q+ C+ +++G K D
Sbjct: 73 RFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGNKCD---- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D++ + +A A+ +SA NV+K + + ++F+
Sbjct: 129 -LEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFN 175
>gi|124088024|ref|XP_001346935.1| Ras-related RAB [Paramecium tetraurelia strain d4-2]
gi|145474741|ref|XP_001423393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057324|emb|CAH03308.1| Ras-related RAB, putative [Paramecium tetraurelia]
gi|74831386|emb|CAI39294.1| rab_C65 [Paramecium tetraurelia]
gi|124390453|emb|CAK55995.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ ++GD +GKT+ L ++V G+ K + ++ I +W+ G
Sbjct: 9 LKVIVIGDSGVGKTNLLLRFVNHTFSNDLKSTIGVQFFTKVISIKNEHIKLQLWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTKFDDFIQ 202
+ + K S ++ FDLT + +L +V++WY++ ++ + II IG K D
Sbjct: 69 RYRSISNSYYKGSHGVIICFDLTHQESLDNVVKWYEEVKQQADFNVKIILIGNKLD---- 124
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ Q + S A+ AK + A +SA + NV+K + + ++
Sbjct: 125 --LSQQRVVGSDTAQQVAKQIGAGYIETSALTSQNVDKAFELLIQEI 169
>gi|440790710|gb|ELR11988.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 244
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ + GD GK++ L +YV DE E SP G + + RI +W+++G +
Sbjct: 30 KVVMQGDSGAGKSAILHRYVRDEFEAHHSPTFGAAFERRCVEWHANRIQLQLWDMSGQER 89
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFIQL 203
+ P+ + + + ++D+ R T +V RW + RK + +++ G K D L
Sbjct: 90 YRSLSPMYFRGAHGAVVVYDIAKRSTFDNVTRWLAETRKYGLEGLVVVVAGNKTD----L 145
Query: 204 PIDLQWTIAS-QARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
+ + + RA A+ L A SA V + + +L
Sbjct: 146 ASSTRRAVTELEGRAKAEELGALFCECSAKTGEGVADVFNLLVGRLM 192
>gi|125812908|ref|XP_001339327.1| PREDICTED: ras-related protein Rab-35-like [Danio rerio]
Length = 209
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD ++GK+S L ++ + G++ +T+ + G R+ IW+ G
Sbjct: 10 FKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVEIDGERVKLQIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + +++ ++ ++D+T+ + +V RW + + I++G K DD +
Sbjct: 70 RFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCDNVCKILVGNKNDDPSKK 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+D Q A + +++ LF +SA NINV ++
Sbjct: 130 LVDTQ-----DAMRFGESVGVRLFETSAKENINVEEMF 162
>gi|326917442|ref|XP_003205008.1| PREDICTED: ras-related protein Rab-31-like [Meleagris gallopavo]
Length = 236
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 63 TTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMD 122
+ +RPS HR + A VA S D +GK+S + ++V D + SP G + M
Sbjct: 29 SNLRPSAKSWHRCVAATADVAR--SRTEDTGVGKSSIVCRFVQDHFDHNISPTIGASFMT 86
Query: 123 KTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR 182
KT+ + IW+ G + P+ + S A + ++D+T + + ++ +W ++ +
Sbjct: 87 KTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELK 146
Query: 183 KCN-QTAIPIIIGTKFD--DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
+ + + I G K D D ++P+ A+ YA+++ A + +SA +N+ +
Sbjct: 147 EHGPENIVMAIAGNKCDLSDIREVPM-------KDAKEYAESIGAIVVETSAKNAVNIEE 199
Query: 240 ILKFITAKL 248
+ + I+ ++
Sbjct: 200 LFQGISQQI 208
>gi|295668134|ref|XP_002794616.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286032|gb|EEH41598.1| GTP-binding protein ypt5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 214
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D +
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQVSSLDKAKSWVKELQRQANENIIIALAGNKLDLVM 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
P D + + A AYA+ F +SA NV ++ I KL
Sbjct: 138 DSP-DKRAIQTADAEAYAREAGLLFFETSAKSATNVRELFTAIAKKL 183
>gi|330818749|ref|XP_003291501.1| hypothetical protein DICPUDRAFT_82173 [Dictyostelium purpureum]
gi|325078307|gb|EGC31965.1| hypothetical protein DICPUDRAFT_82173 [Dictyostelium purpureum]
Length = 209
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+LKI L GD GKTS L +Y D + +KT+++ +I ++ + G
Sbjct: 14 SLKIILSGDSGSGKTSILSRYFEDIYSDEFPITYTQDQKEKTIILEDKKIKLNVCDTAG- 72
Query: 143 AKAQDHLPVACKDSI----AILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
Q+ + C I+ +FDLT + +V RWY + + P+II
Sbjct: 73 ---QERFRMICHSPYRGVQGIVIVFDLTDFNSFDNVKRWYCEGERYASEGTPVIIVGNKI 129
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
D + L + Q + A +L A +SA YNINV K+
Sbjct: 130 DLVDLKKNDQVVSNEVIKELADSLGAPYIETSAKYNINVEKLF 172
>gi|323333722|gb|EGA75114.1| Sec4p [Saccharomyces cerevisiae AWRI796]
Length = 186
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
++ + A Q A AK L SSA + NVN+
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNE 171
>gi|106507164|ref|NP_001020471.2| ras-related protein Rab-12 [Homo sapiens]
gi|114672319|ref|XP_001140752.1| PREDICTED: ras-related protein Rab-12 [Pan troglodytes]
gi|122064944|sp|Q6IQ22.3|RAB12_HUMAN RecName: Full=Ras-related protein Rab-12
gi|119622021|gb|EAX01616.1| hCG37212 [Homo sapiens]
gi|307684354|dbj|BAJ20217.1| RAB12, member RAS oncogene family [synthetic construct]
gi|410212514|gb|JAA03476.1| RAB12, member RAS oncogene family [Pan troglodytes]
gi|410255034|gb|JAA15484.1| RAB12, member RAS oncogene family [Pan troglodytes]
Length = 244
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 103 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 162
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 163 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 215
>gi|389592722|ref|XP_003721632.1| small GTP binding protein rab6-like protein [Leishmania major
strain Friedlin]
gi|321438164|emb|CBZ11916.1| small GTP binding protein rab6-like protein [Leishmania major
strain Friedlin]
Length = 274
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR-ISYSIWEVTGDA 143
K+ LLGD +GKTS + +++ D +Q P G++ KT+ + R + +W+ G
Sbjct: 26 KLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRLHLWDTAGQE 85
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ +P ++S A + ++D+TSR T S +W + R + + +++G K D
Sbjct: 86 RFHSLIPSYIRNSAATVVVYDITSRPTFFSAFKWIDEVRSESGADVVIMLVGNKVDQ--- 142
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + A +A A + SA + N+ + + + A L
Sbjct: 143 -ASERREVSAEEAMKKASECSVLFMEVSAKHGTNIKHMFRQVAAAL 187
>gi|321448228|gb|EFX61364.1| hypothetical protein DAPPUDRAFT_69789 [Daphnia pulex]
Length = 141
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI +GD +GK+S + +++ +E + +P G++ + K + V+ + +W+ G
Sbjct: 2 FKIVFIGDQSVGKSSIINRFIKNEFDSAHNPTVGIDFVSKNVTVKEKSVRLQLWDTAGQE 61
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW--YQQARKCNQTAIPIIIGTKFD 198
+ + +P +DS A+ +FD+T+ + +++ W Y + + AI +II K D
Sbjct: 62 RFRSLIPGYLRDSHAVFLVFDVTNADSFQNLNMWLDYVKENRGEDVAI-VIIANKID 117
>gi|167527390|ref|XP_001748027.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773445|gb|EDQ87084.1| predicted protein [Monosiga brevicollis MX1]
Length = 200
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
D D +K+ +GD +GK+S ++++ + P G++ +T+ ++G ++
Sbjct: 3 FDNDYDYLVKLCAVGDSQVGKSSIIQRFANGIFPEFHGPTIGVDFFFRTVEMKGKQVKIQ 62
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIG 194
+W+ G + Q + + I+F++DLT + +S+ RWY+ +K ++ I I++G
Sbjct: 63 VWDTAGQERFQSITQSYYRGAHGIIFVYDLTDVVSAQSLSRWYEDVKKSARSDIKCIVVG 122
Query: 195 TKFD 198
K D
Sbjct: 123 NKAD 126
>gi|145257106|ref|XP_001401615.1| GTP-binding protein ypt5 [Aspergillus niger CBS 513.88]
gi|134058525|emb|CAL00734.1| unnamed protein product [Aspergillus niger]
gi|350632151|gb|EHA20519.1| hypothetical protein ASPNIDRAFT_54582 [Aspergillus niger ATCC 1015]
Length = 218
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ + + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYA+ F +SA + NV ++ I KL
Sbjct: 138 ESP-DKRAIPTADAEAYAREAGLLFFETSAKTSSNVKELFTAIAKKL 183
>gi|312283531|dbj|BAJ34631.1| unnamed protein product [Thellungiella halophila]
Length = 213
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + P G++ + KT+ + + +W+
Sbjct: 7 LAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTA--IPIIIGTKFD 198
G + + +P +DS + ++D+ +R T ++ +W + + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDVANRQTFLNISKWIDDVHRERGSGDVIIVLVGNKTD 126
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + S+ K +SA N N+ + + I A L
Sbjct: 127 -----LVEKRQVSISEGEDKGKEHGVMFIETSAKENFNIKALFRKIAAAL 171
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI LLGD +GK+ L ++V D+ G++ KT+ + G R+ +W+ G
Sbjct: 21 MKILLLGDSGVGKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDINGKRVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T +++ +W+ + ++ + +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIVLIYDVTDERTFENIRQWFSTVNQHASEDVVMLLVGNKKD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + Q A AK L +SA + NV++I F AKL
Sbjct: 137 --MDTRTVSYEQGEALAKELGIPFIEASAKDDTNVSEIF-FTLAKL 179
>gi|427784931|gb|JAA57917.1| Putative ras-related protein rab-21 [Rhipicephalus pulchellus]
Length = 214
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
A K+ LLG+ +GKTS + +YV ++ + +DK L + G R+ +IW+ G
Sbjct: 12 AFKVVLLGEGCVGKTSLVLRYVENKFNDKHLSTLQASYLDKRLNIAGERVQLAIWDTAGQ 71
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKFDDFI 201
K P+ +DS + ++D+T + V W ++ RK T + + I G K D
Sbjct: 72 EKFHALGPIYYRDSNGAVLVYDITDEGSFIKVQNWVKELRKMLGTDVCLTIAGNKVD--- 128
Query: 202 QLPIDLQWTIA-SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
+D Q ++ ++A AYA ++ AT F +SA N ++ + ++ ++ + T
Sbjct: 129 ---LDKQRNVSAAEAEAYAASVGATHFHTSAKLNRGIDDLFLDLSKRMMQVANT 179
>gi|270013048|gb|EFA09496.1| hypothetical protein TcasGA2_TC010990 [Tribolium castaneum]
Length = 297
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 99 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 158
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D +
Sbjct: 159 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDE 218
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
I + + + A+ L F +SA NINV + + +L DI
Sbjct: 219 RVISFE-----RGKQLAEQLGVEFFETSAKENINVKAVFE----RLVDI 258
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 88 LLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQD 147
L+GD +GK++ L ++ +E G+ +++ V G I IW+ G + +
Sbjct: 2 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 61
Query: 148 HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFIQLP 204
+ ++ L ++D+ T ++V RW ++ R + I I ++G K D +P
Sbjct: 62 ITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 121
Query: 205 IDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 122 TD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 161
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 86 ISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKA 145
+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G +
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 73
Query: 146 QDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFIQ 202
+ + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 134 VPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|340501006|gb|EGR27830.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 190
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR--ISYSIWEVTGD 142
KI ++G+ +GKTS +Y D+ + ++K++ ++ + ++ +IW+ G
Sbjct: 9 KIVIVGEGRVGKTSITLRYCQDQFSEDQESTINAFYLEKSINLQNSDEVVNIAIWDTAGQ 68
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTA--IPIIIGTKFDDF 200
K + +P D++ + ++D+T + + V W ++ ++C + I I G K D
Sbjct: 69 EKFRAIVPTYYHDAVCAILVYDITIKESFDKVKSWIKELQECTDRSKLIVCIAGNKGD-- 126
Query: 201 IQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
++ Q I Q A YAK + A F +SA N+ +N++ +FI ++ + L++
Sbjct: 127 ----LENQRQITKQSAEDYAKQVGAKHFTTSAKANLGINEMFQFIADEIQRQGFNLQK 180
>gi|332225892|ref|XP_003262119.1| PREDICTED: ras-related protein Rab-12 [Nomascus leucogenys]
Length = 244
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 103 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 162
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 163 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 215
>gi|156391919|ref|XP_001635797.1| predicted protein [Nematostella vectensis]
gi|156222894|gb|EDO43734.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 8/164 (4%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
D ++K+ LGD +GK+ +E+++ D + L + V I W+
Sbjct: 20 DKETSVKVICLGDSAVGKSKLVERFLMDGYKPQQLSTYALTLFHYETKVDDKDIRVDFWD 79
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD 198
G + P + A L +FD+T + T K++ WY++ RK + I++ K
Sbjct: 80 TAGQERFSSMHPSYYHQAHACLLVFDITRKITYKNLANWYKELRKYRDSIPCIVVANK-- 137
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
ID+ + + ++ + K +F SA+ NV K+ +
Sbjct: 138 ------IDVDYKVTQKSFNFPKKYGLPFYFVSASDGTNVVKVFR 175
>gi|426254027|ref|XP_004020688.1| PREDICTED: ras-related protein Rab-31 [Ovis aries]
Length = 252
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 38 RYRMLPRSTVTSP-SPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGK 96
++ LP V SP S E G+ P LC L LV L D +GK
Sbjct: 34 KWSQLPSKGVESPGSHGAEEKGIRP-------LC-----LHGSVLV-----LFQDTGVGK 76
Query: 97 TSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDS 156
+S + ++V D + SP G + M KT+ + IW+ G + P+ + S
Sbjct: 77 SSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGS 136
Query: 157 IAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFIQLPIDLQWTIAS 213
A + ++D+T + + ++ +W ++ ++ I + I G K D D ++P+
Sbjct: 137 AAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPL-------K 189
Query: 214 QARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 190 DAKEYAESIGAVVVETSAKNAINIEELFQGISRQI 224
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R +D + K+ L+GD +GK++ L ++ +E G+ +T+ V G I
Sbjct: 3 RKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-I 192
IW+ G + + + ++ L ++D+T T +V RW ++ R + I I +
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIML 122
Query: 193 IGTKFD--DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+G K D +PID A+ +A+ + +SA + NV K + I +++
Sbjct: 123 VGNKSDLSHMRAVPID-------DAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQ 175
Query: 251 I 251
I
Sbjct: 176 I 176
>gi|213514896|ref|NP_001134562.1| ras-related protein Rab-35 [Salmo salar]
gi|209734286|gb|ACI68012.1| Ras-related protein Rab-35 [Salmo salar]
gi|209734894|gb|ACI68316.1| Ras-related protein Rab-35 [Salmo salar]
Length = 201
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + G++ +T+++ G ++ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVVINGEKVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+TS + +V RW + + I++G K DD
Sbjct: 69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGNKNDDPNSK 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
++ + A+ +A+ + LF +SA NINV ++ IT
Sbjct: 129 VVE-----TTDAQKFAEQMGINLFETSAKENINVEEMFNCIT 165
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R D + K+ L+GD +GK++ L ++ +E G+ +TL V G +
Sbjct: 3 RRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-I 192
IW+ G + + + ++ L ++D+T T ++V RW ++ R + I I +
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIML 122
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
IG K D L+ A++YA+ +SA NV K + I ++++ I
Sbjct: 123 IGNKTD-----LKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRI 176
>gi|146184156|ref|XP_001027916.2| hypothetical protein TTHERM_00497270 [Tetrahymena thermophila]
gi|146143332|gb|EAS07674.2| hypothetical protein TTHERM_00497270 [Tetrahymena thermophila
SB210]
gi|307777910|dbj|BAJ21351.1| Rab-family small GTPase RabX33 [Tetrahymena thermophila]
Length = 213
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGD-----EKEQGGSPGEGLNMMDKTLLVRGAR 131
+ D + +LGD +GKTS LE + E+EQ + LNM +
Sbjct: 3 NEDYHFKFRFVILGDKSVGKTSLLESITQNYGKIMEQEQS----DELNMKTVGYMDVDKL 58
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
+ WE+ G + QD+ C + A ++MFD++ R T + + W Q++ KC + + I
Sbjct: 59 FKIAYWEIPGQQRNQDYFYRYCLGASAAIYMFDVSRRQTFERIETWIQESEKC-EIPVRI 117
Query: 192 IIGTKFD 198
+IG K D
Sbjct: 118 LIGNKVD 124
>gi|123478510|ref|XP_001322417.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121905263|gb|EAY10194.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ ++G+ +GKTS + K+ D+ ++ G+P G + K + V +++ +W+ G +
Sbjct: 10 KVIMMGESSVGKTSIVYKFSRDQYDEAGTPTIGACYITKIVEVDNKKLALHVWDTAGQER 69
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQ--TAIPIIIGTKFDDFIQ 202
+ +P+ + S+A++F+ S ++ + W ++ NQ T + ++ KFD I
Sbjct: 70 FRSIIPMYLRGSLAVIFVCSADSPESIDKLNEW-REVVITNQPETKVNFVVFNKFD--IN 126
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
P DL+ +A +A++ + +SA NIN+ + + + K+ +
Sbjct: 127 SP-DLE----QKAVEFAQSHGYSFIKTSAKENINIINLFEAVAKKILE 169
>gi|304602|gb|AAC37382.1| RabA, partial [Dictyostelium discoideum]
gi|739976|prf||2004272C rabA gene
Length = 199
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K +GD +GK+S L ++ D + G++ KT+ + G I IW+ G
Sbjct: 7 FKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + H + A++ ++D+T + + ++V +W Q+ R I +IIG K D Q
Sbjct: 67 RFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARHNVIKMIIGNKSDMISQ 126
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
+D A+ +A +L+ T +SA IN+
Sbjct: 127 KVVD-----PFLAQEFADSLDITFKETSAKQAINI 156
>gi|410927045|ref|XP_003976978.1| PREDICTED: ras-related protein Rab-35-like [Takifugu rubripes]
Length = 209
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD ++GK+S L ++ + G++ +T+ + G R+ IW+ G
Sbjct: 10 FKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVDINGERVKLQIWDTAGQE 69
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + +++ ++ ++D+T+ + +V RW + + + I++G K DD +
Sbjct: 70 RFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCDSVCKILVGNKNDDPARK 129
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+D Q A + +++ +F +SA NINV ++ T
Sbjct: 130 RVDSQ-----DAAHFGESVGVRVFETSAKENINVEEMFMAFT 166
>gi|380027163|ref|XP_003697300.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-39B-like
[Apis florea]
Length = 218
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L+ + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + +W AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMDARRHIEPHRPVFALVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + +ARA+A +SA INV + + +T ++++ T E +
Sbjct: 128 LVTNGSRREVSKEEARAFADEHGVHHIETSAKTGINVEEAFRTVTQEVYNRIQTGEYKVE 187
Query: 261 IG 262
G
Sbjct: 188 DG 189
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +TL V G + IW+ G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + + ++ L ++D+T + ++V RW ++ R I I +IG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNKTD---- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
L+ A++YA+ + +SA NV+K + I A+++ I
Sbjct: 129 -LKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRI 176
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|115312968|gb|AAI24015.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 313
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 112 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 171
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + + +W + K ++ A +++G K D
Sbjct: 172 RFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETD 231
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P L R+
Sbjct: 232 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDLVRS 284
>gi|449544952|gb|EMD35924.1| hypothetical protein CERSUDRAFT_53067 [Ceriporiopsis subvermispora
B]
Length = 223
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 79 DNLVA---LKISLLGDCHIGKTSFLEKYVGDEK---EQGGSPGEGLNMMDKTLLVRGARI 132
D +VA +K+ L+G+ +GK+S L ++ DE+ E S G++ + V G ++
Sbjct: 4 DKVVAPINVKLLLIGNSSVGKSSLLLRF-SDEQWLPEDESSATIGVDFRVHKMEVNGKKV 62
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPI 191
SIW+ G + + + + I+ ++D+ +R + ++ RWY + + + + I
Sbjct: 63 KLSIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFDALPRWYSELETYVSSSVVKI 122
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
I+G K D + S+ + +A+ + + +SA ++ V + + + K+ D
Sbjct: 123 IVGNKVDKEFSRQVSY-----SEGQQFAQRMGSLFVEASAKTSVGVREAFQEVVEKIIDT 177
Query: 252 P 252
P
Sbjct: 178 P 178
>gi|432943838|ref|XP_004083295.1| PREDICTED: ras-related protein Rab-21-like [Oryzias latipes]
Length = 220
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 15 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 74
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 75 ERFHALGPIYYRDSNGAVLVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNKID--- 131
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
L D ++ A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 132 -LDKDRHVSV-EDAESYAESVGAKHYHTSAKLNKGIEELFLDLCKRMMETAHAEER 185
>gi|358387599|gb|EHK25193.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 220
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 20 FKLVLLGESAVGKSSIVLRFVKDQFDSFRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 79
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 80 ERYKSLAPMYYRNANCAVVVYDITQSASLDKAKAWVKELQRQANENIIIALAGNKLDLVT 139
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYA+ F +SA NV ++ I KL
Sbjct: 140 EQP-DKRAIPTADAEAYAREAGLLFFETSAKTAENVRELFTAIAKKL 185
>gi|301616136|ref|XP_002937521.1| PREDICTED: ras-related protein Rab-12 [Xenopus (Silurana)
tropicalis]
Length = 345
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 144 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 203
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + + +W + K ++ A +++G K D
Sbjct: 204 RFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETD 263
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P L R+
Sbjct: 264 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDLVRS 316
>gi|198430343|ref|XP_002121682.1| PREDICTED: similar to GTP-binding protein [Ciona intestinalis]
Length = 209
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 128 ---LSDKRQVSIEEGERK-AKELNVMFIETSAKTGYNVKQLFRRVAAAL 172
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ + G+ K+L + G I IW+ G
Sbjct: 13 FKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + ++A L ++D+T R + +V RW ++ R ++I I++ D I L
Sbjct: 73 RYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHL 132
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKLFDI 251
S+ A A LFF +SA INV + + I +++ I
Sbjct: 133 R------AISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGI 176
>gi|126327867|ref|XP_001363218.1| PREDICTED: ras-related protein Rab-6A-like isoform 2 [Monodelphis
domestica]
Length = 208
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 41 MLPRSTVTSPSPSVLESGLVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFL 100
ML S + PS S+L+ + P R + D L K+ L+GD +GK++ L
Sbjct: 1 MLAMSYLLVPSVSLLKGFIAPDEM-------GTRDDEYDYL--FKVVLIGDSGVGKSNLL 51
Query: 101 EKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAIL 160
++ +E G+ +++ V G I IW+ G + + + ++ L
Sbjct: 52 SRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGAL 111
Query: 161 FMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DFIQLPIDLQWTIASQARA 217
++D+ T ++V RW ++ R +Q + +++G K D +P D +A+A
Sbjct: 112 LVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVPTD-------EAKA 164
Query: 218 YAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+A+ + +SA + NV + I +++ I
Sbjct: 165 FAERNGLSFIETSALDSTNVETAFQNILTEIYRI 198
>gi|367051801|ref|XP_003656279.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
gi|347003544|gb|AEO69943.1| hypothetical protein THITE_2069455 [Thielavia terrestris NRRL 8126]
Length = 219
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 19 FKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGNKLDLVA 138
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYA+ F +SA NV ++ I KL
Sbjct: 139 EQP-DKRAVQTADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|409049886|gb|EKM59363.1| hypothetical protein PHACADRAFT_249809 [Phanerochaete carnosa
HHB-10118-sp]
Length = 365
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKE-QGGSPGEGLNMMDKTLLVRGARISYSIW 137
D V KI ++G+ +GKTS L +Y ++ E + + G + K L V G RI +W
Sbjct: 16 DQGVDAKIVVMGNTGVGKTSLLYRYTQNKFEPKNTTSTTGALFISKKLYVNGIRIRLQLW 75
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTK 196
+ G + + P+ + + A L M+D+T+ + + + W ++ + C+ I I+G+K
Sbjct: 76 DTAGQERFRSMAPMYYRGAHAALLMYDITNAASFEDIRGWLEELKSNCSPDLIIYIVGSK 135
Query: 197 FDDFIQLPI 205
D Q I
Sbjct: 136 ADLLRQRQI 144
>gi|417408868|gb|JAA50968.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 232
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 31 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 90
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 91 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 150
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 151 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 203
>gi|380799405|gb|AFE71578.1| ras-related protein Rab-12, partial [Macaca mulatta]
Length = 222
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 21 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 81 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 140
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 141 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 193
>gi|348501270|ref|XP_003438193.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oreochromis
niloticus]
Length = 208
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q TI + AK LN +SA NV ++ + + A L
Sbjct: 130 ---LEEKRQITI-EEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAAL 174
>gi|325181453|emb|CCA15878.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2038
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1330 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1385
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1386 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1445
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1446 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1501
Query: 247 K 247
+
Sbjct: 1502 R 1502
>gi|297469971|ref|XP_001249324.2| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|297493177|ref|XP_002700179.1| PREDICTED: ras-related protein Rab-21 [Bos taurus]
gi|296470701|tpg|DAA12816.1| TPA: ras-related protein Rab-21-like [Bos taurus]
Length = 272
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R A + K+ LLG+ +GKTS + Y ++ + + K L + G R++
Sbjct: 57 RPAAAGRTYSFKVVLLGEGCVGKTSLVLCYCENKFNDKHITTLQASFLTKKLNIGGKRVN 116
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-I 192
+IW+ G + P+ +DS + ++D+T + + V W ++ RK I + I
Sbjct: 117 LAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCI 176
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+G K D + + +Q +A +YA+++ A + +SA N + ++ + ++ +
Sbjct: 177 VGNKVDLEKERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETA 231
Query: 253 WTLER 257
ER
Sbjct: 232 QVDER 236
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R +D + K+ L+GD +GK++ L ++ +E G+ +T+ V G I
Sbjct: 3 RKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-I 192
IW+ G + + + ++ L ++D+T T +V RW ++ R + I I +
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIML 122
Query: 193 IGTKFD--DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
+G K D +PID A+ +A+ + +SA + NV K + I +++
Sbjct: 123 VGNKSDLSHMRAVPID-------DAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQ 175
Query: 251 I 251
I
Sbjct: 176 I 176
>gi|163915527|gb|AAI57380.1| Rab6a protein [Danio rerio]
Length = 208
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q +I R AK LN +SA NV ++ + + A L
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAAL 174
>gi|50418070|gb|AAH77537.1| LOC445870 protein, partial [Xenopus laevis]
Length = 215
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 91 DCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLP 150
D +GK+S + ++V D + +P G + M KT+ + + IW+ G + + P
Sbjct: 35 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFLIWDTAGQERFRALAP 94
Query: 151 VACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQLPIDLQW 209
+ + S A + ++D+T T ++ W ++ R+ I + I G K D D++
Sbjct: 95 MYYRGSTAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCD-----LNDVRE 149
Query: 210 TIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ +A+ YA ++NA +SA IN+N++ I+ ++
Sbjct: 150 VLEKEAKDYADSINAVFVETSAKNAININELFIEISKRI 188
>gi|403347619|gb|EJY73239.1| Rab GTPase [Oxytricha trifallax]
Length = 230
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI--WEVTG 141
L I +LGD +GKTS ++ Y + E G++ + + + +Y + W+ G
Sbjct: 21 LNILILGDASVGKTSLVKLYNNETFELNRICTLGVDFYTRKVKSEYSNQTYKVCLWDTAG 80
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRW----YQQARKCNQTAIPIIIGTKF 197
+ + K S AI+ FD+TS + ++V+ W YQQA ++ + I++G K
Sbjct: 81 QERFRSIAHTFYKSSKAIIVAFDVTSLLSFENVVVWLKGIYQQA---SEEVVIILVGNKV 137
Query: 198 DDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D Q I + Q RA A F +SA+ N NV + FI K+
Sbjct: 138 DLKDQRRITFE-----QGRALANKYKIRYFETSASLNYNVENMFDFIIDKV 183
>gi|321470661|gb|EFX81636.1| hypothetical protein DAPPUDRAFT_195992 [Daphnia pulex]
Length = 201
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 77 DADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSI 136
D D+L K+ ++GD +GK+S L ++ + G++ +T+L+ G R+ I
Sbjct: 4 DYDHL--FKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTILLNGERVKLQI 61
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTK 196
W+ G + + + + ++ ++D++S + +V RW + + I++G K
Sbjct: 62 WDTAGQERFRTITSTYYRGTHGVIVVYDVSSGESFANVKRWLHEIEQNCDVVNRILVGNK 121
Query: 197 FDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
D +P D + + A+ +A + LF +SA N NV ++ IT ++
Sbjct: 122 DD----MP-DRKVVLTEDAQRFASQMGIQLFETSAKDNKNVEEMFNAITQQVL 169
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 11 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 71 RYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGNKSD---- 126
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLF 249
L+ AR YA+ N + +SA + NV + + I +++
Sbjct: 127 -LRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIY 172
>gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei]
gi|261326389|emb|CBH09349.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei
gambiense DAL972]
Length = 230
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+V KI LLGD +GKTS + +++ D +Q G++ KTL + +W+
Sbjct: 25 VVKHKIVLLGDQAVGKTSLITRFMYDTFDQQYQATIGIDFFSKTLHINNRATRLHVWDTA 84
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD 198
G + + +P ++S A + ++D+TSR + S +W + R + I ++G K D
Sbjct: 85 GQERFRSLIPSYIRNSAATVVVYDITSRSSFLSTFKWIDEVRAARGDDVIIALVGNKCD 143
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 43 PRSTVTSPSPSVLESGLVPGTTVRP--SLCHSHRHLDADNLVALKISLLGDCHIGKTSFL 100
P T +P+PS L G GT P SL +++ L+GD +GK++ L
Sbjct: 27 PTGTTAAPAPSFL--GRAIGTRGHPLQSL--------------IEVVLIGDSGVGKSNLL 70
Query: 101 EKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAIL 160
++ +E G+ +++ V G I IW+ G + + + ++ L
Sbjct: 71 SRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGAL 130
Query: 161 FMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DFIQLPIDLQWTIASQARA 217
++D+ T ++V RW ++ R + I I ++G K D +P D +ARA
Sbjct: 131 LVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTD-------EARA 183
Query: 218 YAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+A+ + +SA + NV + I +++ I
Sbjct: 184 FAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 217
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L +Y +E G+ +T+ + G I IW+ G
Sbjct: 15 FKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQIWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ L ++D++ R T ++ RW + + + +I+G K D
Sbjct: 75 RFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVGNKTD---- 130
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+D + + A A+A N +SA + NV + + ++++I
Sbjct: 131 -LLDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNI 178
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/176 (19%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ D ++ G++ K L V G R+ +IW+ G
Sbjct: 15 FKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDFKVKHLEVEGKRVKLTIWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN----QTAIPIIIGTKFDD 199
+ + + + ++ ++D+T + +++ +W ++ + + ++ + +++G K D
Sbjct: 75 RFRTLTSSYYRGAHGVVLVYDVTRTDSFENLQQWLKEVQMYSPGNGESVVKLLVGNKCDL 134
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTL 255
Q+P + +A A+A++ +SA + + ++ + K+ + P TL
Sbjct: 135 ERQVPFE-------EADAWARSQGMLFLEASAKTRLGIRQVFTEVVKKMLENPETL 183
>gi|367018094|ref|XP_003658332.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
gi|347005599|gb|AEO53087.1| hypothetical protein MYCTH_2293959 [Myceliophthora thermophila ATCC
42464]
Length = 219
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 78 ADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSI 136
++ K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + I
Sbjct: 13 SNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFEI 72
Query: 137 WEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGT 195
W+ G + + P+ +++ + ++D+T +L W ++ R+ N+ I + G
Sbjct: 73 WDTAGQERYKSLAPMYYRNANCAVVVYDITQATSLDKAKSWVKELQRQANENIIIALAGN 132
Query: 196 KFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
K D + P D + + A AYA+ F +SA NV ++ I KL
Sbjct: 133 KLDLVTEQP-DKRAIETADAEAYAREAGLLFFETSAKTAENVQELFTAIAKKL 184
>gi|325181450|emb|CCA15872.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2011
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1303 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1358
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1359 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1418
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1419 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1474
Query: 247 K 247
+
Sbjct: 1475 R 1475
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
+HR ++ D KI L+GD +GK++ L ++ +E G+ +TL V G
Sbjct: 2 AHR-VEQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
+ IW+ G + + + ++ L ++D+T R T +V+RW ++ R + I I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 192 IIGTKFDDFIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++ D L ++A + + A+ + +SA NV K + + A+++
Sbjct: 121 MMAGNKADLNHLR-----SVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYH 175
Query: 251 I 251
I
Sbjct: 176 I 176
>gi|123484501|ref|XP_001324283.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121907163|gb|EAY12060.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 193
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ KI LLG+ GKTS +++ P G N D + ++ + +W+ G
Sbjct: 8 SYKIILLGNSGTGKTSIIDRKRLGTTAPDLHPTIGCNSTDMVINLKDKSVKLKVWDTAGQ 67
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIP-IIIGTKFDDFI 201
+ + +P+ + + A L +FD+T +++S+ W + T +P ++G K D
Sbjct: 68 EEYKSIVPIYTRGAHAALLVFDVTDMSSIQSLDGWRSMLLESEPTEVPFFVVGNKID--- 124
Query: 202 QLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + TI+ + A+ YA +A L+F SA +N++ + + K+
Sbjct: 125 ---MKSENTISREIAQTYATRYSADLYFVSALSGQGINELFEKVAEKV 169
>gi|123471393|ref|XP_001318896.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901667|gb|EAY06673.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
++K+ LLGD GKTS ++ ++ ++ G + + + + + IW+ GD
Sbjct: 6 SIKVVLLGDSSCGKTSLIKAWMLEDNPTKTLATVGASFRRQFVDIDDIQYCIDIWDTAGD 65
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ 202
K +P+ C+ + +FD+T T SV +W + ++ I+IG K D
Sbjct: 66 EKYSSTIPLYCRSAFGAFIVFDVTRPETFNSVSKWIEILKQSAGDVPYILIGNKAD---- 121
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
+D QA YA L F +SA +NV
Sbjct: 122 -LVDRIIVTQEQANEYASTLKVDYFDTSALTGLNV 155
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 140 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 199
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 200 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 259
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
+P D +ARA+A+ N + +SA + NV + K I
Sbjct: 260 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNI 296
>gi|332016796|gb|EGI57617.1| Ras-related protein Rab-3 [Acromyrmex echinatior]
Length = 260
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 58 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 117
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D
Sbjct: 118 RYRTITTAYYRGAMGFILMYDITNEESFNSVQDWVTQIKNYSWDNAQVILVGNKCD---- 173
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILK 242
++ + I+++ + A+ L F +SA NINV + +
Sbjct: 174 --MEEERVISTERGKQLAEQLGVRFFETSAKENINVKAVFE 212
>gi|327281978|ref|XP_003225722.1| PREDICTED: ras-related protein Rab-12-like [Anolis carolinensis]
Length = 258
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 57 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 116
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D +
Sbjct: 117 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCEVD 176
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q + + + F +SA N NV++I LK + L +P + RN
Sbjct: 177 REISRQ-----QGEKFTQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVIRN 229
>gi|325181451|emb|CCA15876.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1355 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1410
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1411 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1470
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1471 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1526
Query: 247 K 247
+
Sbjct: 1527 R 1527
>gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspergillus nidulans FGSC A4]
gi|40739917|gb|EAA59107.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259481595|tpe|CBF75261.1| TPA: RAB GTPase Ypt5, putative (AFU_orthologue; AFUA_4G08040)
[Aspergillus nidulans FGSC A4]
Length = 218
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ + + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYA+ F +SA + NV ++ I KL
Sbjct: 138 ENP-DKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL 183
>gi|325181448|emb|CCA15868.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2066
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1358 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1413
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1414 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1473
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1474 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAK 1529
Query: 247 K 247
+
Sbjct: 1530 R 1530
>gi|296192147|ref|XP_002743931.1| PREDICTED: rab-like protein 2B-like isoform 1 [Callithrix jacchus]
Length = 238
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 59 LVPGTTVRPSLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGL 118
+ G T +PS ++ DAD+ V KI LGD +GK+ +E+++ D + L
Sbjct: 1 MAEGKT-KPSELDQAKY-DADDNV--KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYAL 56
Query: 119 NMMDKTLLVRGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWY 178
M T V G I W+ G + Q + A + +FD+ + T K++ WY
Sbjct: 57 TMYKHTATVDGKTILVDFWDTAGQERFQSMHASYYYKAHACIMVFDVQRKVTYKNLSTWY 116
Query: 179 QQARKCNQTAIPIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVN 238
+ R+ I++ K DD + ++ +AK + L+F SA NV
Sbjct: 117 TELREFRPEIPCIVVANKIDDI---------NVTQKSFNFAKKFSLPLYFVSAADGTNVV 167
Query: 239 KILK--FITAKLFD 250
K+ + KLF+
Sbjct: 168 KVRAHWWFAGKLFN 181
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 8/182 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +TL V G + IW+ G
Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFIQ 202
+ + + ++ L ++D+T T ++V RW ++ R I I +IG K D
Sbjct: 73 RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTD---- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
L+ A+ Y++ + +SA NV K + I A+++ I +++L+
Sbjct: 129 -LKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRI--ISKKSLSSN 185
Query: 263 EP 264
EP
Sbjct: 186 EP 187
>gi|303277025|ref|XP_003057806.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460463|gb|EEH57757.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+ K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 9 MAKYKLVFLGDQSVGKTSVISRFMYDKFDNSYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D++SR + + RW + R + I +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSSVAVVVYDVSSRASFLNCARWIDEVRTERGSDVIIVLVGNKTDL 128
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + ++ + A A+ SA NV + + I A L
Sbjct: 129 VERREVSVE-----EGDARAREHGVMFIECSAKAGFNVKALFRKIAAAL 172
>gi|440493794|gb|ELQ76220.1| GTPase Rab5/YPT51, small G protein superfamily GTPase
[Trachipleistophora hominis]
Length = 198
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 9/176 (5%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
L+ K+ +LG +GK+S ++KYV DE G + KT + I Y
Sbjct: 5 LNERKEYTYKMVVLGYYSVGKSSLIQKYVKDEFNPNEESTIGAAFLTKTSIYPNYNIKYE 64
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIG 194
IW+ G + +P+ + + L M+D+T + ++ W + + + + + ++IG
Sbjct: 65 IWDTAGQERYNSLIPMYYRGAHVALIMYDITCPESFETAKNWVTELSSEKPKNFVKVLIG 124
Query: 195 TKFD-DFIQLPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKILKFITAKL 248
K D + +D + +A+ YA+ N LFF +SA NV I ++ L
Sbjct: 125 NKSDLENTSRKVDFE-----EAKEYARR-NKMLFFEASAKTGFNVENIFSSVSEML 174
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRI 175
>gi|240974176|ref|XP_002401800.1| zinc finger protein, putative [Ixodes scapularis]
gi|215491064|gb|EEC00705.1| zinc finger protein, putative [Ixodes scapularis]
gi|442756045|gb|JAA70182.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 199
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + G++ +TL V G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW + + I++G K DD +
Sbjct: 69 RFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPSRK 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+ + A+ +A + LF +SA NINV ++ IT
Sbjct: 129 VV-----LTEDAQRFADQMGIQLFETSAKENINVEEMFNAIT 165
>gi|83751822|gb|ABC42924.1| GTP-binding protein [Anas platyrhynchos]
Length = 208
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +++
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|167013419|pdb|3BBP|A Chain A, Rab6-Gtp:gcc185 Rab Binding Domain Complex
gi|167013420|pdb|3BBP|B Chain B, Rab6-Gtp:gcc185 Rab Binding Domain Complex
gi|167013421|pdb|3BBP|C Chain C, Rab6-Gtp:gcc185 Rab Binding Domain Complex
Length = 211
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 14 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 73
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 74 GLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 132
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 133 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 188
Query: 260 TIGEPIID 267
E +ID
Sbjct: 189 ---EDMID 193
>gi|266879|sp|P29687.1|RAB5_TOBAC RecName: Full=Ras-related protein Rab5
gi|19986|emb|CAA45352.1| Nt-rab5 [Nicotiana tabacum]
Length = 200
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S RH +NL A K+ LLGD GK+S + ++V + + G T+ V A
Sbjct: 3 SRRH---NNLNA-KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNAT 58
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP 190
+ + IW+ G + P+ + + A + ++D+TS +L +W Q+ +K N +
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVM 118
Query: 191 IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ LFF +SA NVN I I +L
Sbjct: 119 ALAGNKAD-----LEDKRKVTAEEARLYAE--ENGLFFMETSAKTATNVNDIFYEIAKRL 171
>gi|291414854|ref|XP_002723671.1| PREDICTED: RAS-related protein RAB-22A, partial [Oryctolagus
cuniculus]
Length = 182
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 91 DCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDHLP 150
D +GK+S + ++V D + +P G + M KT+ + + IW+ G + + P
Sbjct: 1 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAP 60
Query: 151 VACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQWT 210
+ + S A + ++D+T T ++ W ++ R+ I + I D ID++
Sbjct: 61 MYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL----IDVREV 116
Query: 211 IASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 117 MERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 154
>gi|238491614|ref|XP_002377044.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|317146075|ref|XP_001821272.2| GTP-binding protein ypt5 [Aspergillus oryzae RIB40]
gi|220697457|gb|EED53798.1| RAB GTPase Ypt5, putative [Aspergillus flavus NRRL3357]
gi|391869236|gb|EIT78438.1| GTPase Rab5/YPT51 [Aspergillus oryzae 3.042]
Length = 218
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 18 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTISLDESTTVKFEIWDTAGQ 77
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ + + G K D
Sbjct: 78 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKSWVKELQRQANENIVIALAGNKLDLVT 137
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYA+ F +SA + NV ++ I KL
Sbjct: 138 ENP-DKRAIPTADAEAYAREAGLLFFETSAKTSSNVRELFTAIAKKL 183
>gi|126321829|ref|XP_001364776.1| PREDICTED: ras-related protein Rab-12-like [Monodelphis domestica]
Length = 246
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 45 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 104
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 105 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 164
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 165 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRN 217
>gi|431906748|gb|ELK10869.1| Ras-related protein Rab-40C [Pteropus alecto]
Length = 281
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
Q QARAYA+ T F S N NV +
Sbjct: 131 AFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNVTE 165
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 8/164 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GKT L ++ DE G+ +TL + R+ IW+ G
Sbjct: 34 FKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQIWDTAGQE 93
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC--NQTAIPIIIGTKFDDFI 201
+ + + ++ + ++D+T R T + V RW ++ R + + +IG K D
Sbjct: 94 RYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIGNKAD--- 150
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+P + A +A A+ LFFS A+ N F+T
Sbjct: 151 -MPAGRREVAADEAARLAE--EQGLFFSEASALTGDNVERAFLT 191
>gi|340379533|ref|XP_003388281.1| PREDICTED: ras-related protein Rab-30-like [Amphimedon
queenslandica]
Length = 212
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GKTS + +Y G P G++ KTL V G+ I IW+ G
Sbjct: 9 FKIVLIGDAGVGKTSIVRRYTDGVFTSAGIPTIGVDFCIKTLSVNGSAIKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA-RKCNQTAIPIIIGTKFDDFIQ 202
+ + + + AI+ ++D+ S T +++ W + R T I+IG K D +
Sbjct: 69 RFRTITQSYYRSADAIVLVYDIGSATTFRNLPEWLSEVDRYAGTTVHKILIGNKSD---R 125
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++Q + SQ +A+ + +SA N++ + + + L D
Sbjct: 126 TDREIQTHLGSQ---FAQENDMPFLETSAKSADNIDNLFEQLAKTLRD 170
>gi|325181454|emb|CCA15881.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2006
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1274 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1329
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1330 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1389
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1390 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAV 1445
Query: 247 KL 248
+
Sbjct: 1446 DI 1447
>gi|134024040|gb|AAI35229.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 274
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 73 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 132
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + + +W + K ++ A +++G K D
Sbjct: 133 RFNSITSAYYRSAKGIILVYDITKKETFEDLPKWMKMIDKYASEEAELLLVGNKLDCETD 192
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P L R+
Sbjct: 193 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDLVRS 245
>gi|427787091|gb|JAA58997.1| Putative rab35 member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 200
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++GD +GK+S L ++ + G++ +TL V G R+ IW+ G
Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFTGNYITTIGVDFKIRTLEVDGERVKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + + ++ ++D+T+ + +V RW + + I++G K DD +
Sbjct: 69 RFRTITSTYYRGTHGVVVVYDVTNGESFANVKRWLHEIEQNCDVVNRILVGNKNDDPSRK 128
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
+ + A+ +A + LF +SA NINV ++ IT
Sbjct: 129 VV-----LTEDAQRFADQMGIQLFETSAKENINVEEMFNAIT 165
>gi|325181449|emb|CCA15870.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2027
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1303 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1358
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1359 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1418
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1419 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAV 1474
Query: 247 KL 248
+
Sbjct: 1475 DI 1476
>gi|547478|emb|CAA85733.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098297|prf||2115367E small GTP-binding protein
Length = 200
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 73 HRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARI 132
H +L+A K+ LLGD GK+S + ++V + + G +TL V A +
Sbjct: 6 HNNLNA------KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATV 59
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPI 191
+ IW+ G + P+ + + A + ++D+TS + +W Q+ +K N +
Sbjct: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMA 119
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ +SA NVN + I +L
Sbjct: 120 LTGNKSD-----LEDKRKVTAEEARVYAEENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|301769597|ref|XP_002920209.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Ailuropoda
melanoleuca]
gi|281341554|gb|EFB17138.1| hypothetical protein PANDA_008927 [Ailuropoda melanoleuca]
Length = 281
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
Q QARAYA+ T F S N NV
Sbjct: 131 AFKRQ-VPTEQARAYAEKNGMTFFEVSPLCNFNV 163
>gi|212275548|ref|NP_001130433.1| uncharacterized protein LOC100191530 [Zea mays]
gi|194689106|gb|ACF78637.1| unknown [Zea mays]
gi|414869113|tpg|DAA47670.1| TPA: ras protein RHN1 [Zea mays]
Length = 204
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 10/168 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V + + G +TL V + + IW+ G +
Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQER 73
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + ++D+T+ + +W Q+ + + N I + G K D
Sbjct: 74 YHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNSNTIVALAGNKAD----- 128
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKLF 249
+D + A +A+AYA+ LFF +SA NVN + I KL
Sbjct: 129 LLDTRQVSADEAKAYAQ--ENGLFFMETSAKTATNVNDVFYEIAKKLL 174
>gi|389743618|gb|EIM84802.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 228
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEK---EQGGSPGEGLNMMDKTLLVRGARISYSIWE 138
+ +K+ L+G+ +GK+S L ++ DE+ E S G++ + V+G ++ SIW+
Sbjct: 10 INVKLLLIGNSSVGKSSLLLRF-SDEQWLPEDEASATIGVDFRVHKMDVKGKKVKLSIWD 68
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKF 197
G + + + + I+ ++D+++R + ++ RW+ + + + + II+G K
Sbjct: 69 TAGQERFRTITSSYYRGAQGIILVYDVSNRESFDALPRWFSELETYVSSSVVKIIVGNKV 128
Query: 198 DDFI--QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
D Q+P ++A +A N +SA ++ V + + A++ D P
Sbjct: 129 DKEYSRQVP-------TAEAEQFAARQNCLFVEASAKTSVGVRDAFRNVVAQILDTP 178
>gi|224115414|ref|XP_002332129.1| predicted protein [Populus trichocarpa]
gi|222875179|gb|EEF12310.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V + + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + ++D++++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMALAGNKAD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + A +A+ YA+ +SA NVN I I +L
Sbjct: 127 LLDARKVTAEEAQVYAQEYGLFFIETSAKTATNVNDIFYEIAKRL 171
>gi|156403879|ref|XP_001640135.1| predicted protein [Nematostella vectensis]
gi|156227268|gb|EDO48072.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVT 140
+ K+ ++GD +GKTSF+++YV + P G++ K + + A + +W++
Sbjct: 4 ILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFALKVIPWAQDATVRLQLWDIA 63
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKC---NQTAIP-IIIGT 195
G + V K + A + MFDLTS+ T S I+W KC N IP I++G
Sbjct: 64 GQERFTSMTRVYYKGAAACVIMFDLTSQQTFNSTIKWKNDLDSKCKLPNGKPIPCILVGN 123
Query: 196 KFD 198
K D
Sbjct: 124 KSD 126
>gi|268532416|ref|XP_002631336.1| C. briggsae CBR-RAB-21 protein [Caenorhabditis briggsae]
Length = 206
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ LLG+ +GK+S + ++V ++ + +KT+ V + IW+ G
Sbjct: 11 FKVVLLGEGCVGKSSLVLRFVENKFSTRHLSTIQASFQNKTVQVDDCKAELHIWDTAGQE 70
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKC-NQTAIPIIIGTKFDDFIQ 202
K P+ + S +L +FD+T + + K V W + + C +TA +I+G K D
Sbjct: 71 KYHALGPIYYRGSNGVLLVFDITEQRSFKKVKNWVLEIKTCLGKTAEILIVGNKID---- 126
Query: 203 LPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + ++ Q A +YA++ A +SA N +++ +T K+
Sbjct: 127 --LDDERQVSRQEAESYAESEGALYMETSAQENRGISEAFTALTEKM 171
>gi|357460687|ref|XP_003600625.1| GTP binding protein [Medicago truncatula]
gi|355489673|gb|AES70876.1| GTP binding protein [Medicago truncatula]
Length = 200
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 73 HRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARI 132
H +L+A K+ LLGD GK+S + ++V + + G +TL V A +
Sbjct: 6 HNNLNA------KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATV 59
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPI 191
+ IW+ G + P+ + + A + ++D+TS + +W Q+ +K N +
Sbjct: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMA 119
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ LFF +SA NVN + I +L
Sbjct: 120 LAGNKSD-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|325181452|emb|CCA15877.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2062
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1330 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1385
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1386 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1445
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1446 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAV 1501
Query: 247 KL 248
+
Sbjct: 1502 DI 1503
>gi|387016274|gb|AFJ50256.1| GTP-binding protein [Crotalus adamanteus]
Length = 208
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +++
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>gi|395856822|ref|XP_003800817.1| PREDICTED: ras-related protein Rab-39A [Otolemur garnettii]
Length = 218
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 31/172 (18%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE-----------GLNMMDKTLLVR-GAR 131
+I LLGD +GKTS L +YV G+PG G+ + L +R G R
Sbjct: 10 FRIVLLGDAAVGKTSLLRRYV------SGAPGTPEPEPEPEPTVGVEFYRRALQLRAGPR 63
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ--ARKCNQTAI 189
+ +W+ G + + ++ + +L +FD+T+R + + + W+Q+ A + AI
Sbjct: 64 VKLQLWDTAGQERFRCITRSFYRNVVGVLLVFDVTNRKSFEHIQDWHQEVTATQGPDKAI 123
Query: 190 PIIIGTKFDDFIQLPIDLQWT---IASQARAYAKALNATLFFSSATYNINVN 238
+++G K DLQ T A +A A +L +SA N+NV+
Sbjct: 124 FLLVGHK--------SDLQSTRCVSAQEAEELATSLGMAFMETSAKSNLNVD 167
>gi|344292254|ref|XP_003417843.1| PREDICTED: ras-related protein Rab-40C-like isoform 1 [Loxodonta
africana]
Length = 281
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGASESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
Q QARAYA+ T F S N NV +
Sbjct: 131 AFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNVTE 165
>gi|325181455|emb|CCA15884.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2025
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1301 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1356
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1357 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1416
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1417 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAV 1472
Query: 247 KL 248
+
Sbjct: 1473 DI 1474
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R D + K+ L+GD +GK++ L ++ +E G+ +TL V G +
Sbjct: 3 RRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-I 192
IW+ G + + + ++ L ++D+T T ++V RW ++ R + I I +
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIML 122
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
IG K D L+ A++YA+ + +SA +NV K + I ++++ I
Sbjct: 123 IGNKTD-----LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRI 176
>gi|432916105|ref|XP_004079294.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Oryzias
latipes]
Length = 208
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTCKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q TI + AK LN +SA NV ++ + + A L
Sbjct: 130 ---LEEKRQITI-EEGEQRAKELNVMFIETSAKTGSNVKQLFRRVAAAL 174
>gi|407854096|gb|EKG06642.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi]
Length = 272
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+V KI LLGD +GKTS + +++ D +Q G++ KT+ V + +W+
Sbjct: 35 VVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTVRLHVWDTA 94
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDD 199
G + + +P ++S + ++D+TSR + +W + R ++ I ++G K D
Sbjct: 95 GQERFRSLIPSYIRNSSGTIVVYDITSRASFLGTFKWIDEVRAERGDSVVIFLVGNKLD- 153
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + +A+ A+ N SA NV + + + L
Sbjct: 154 ----AQEKRVVSTEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEAL 198
>gi|410924265|ref|XP_003975602.1| PREDICTED: ras-related protein Rab-6B-like isoform 1 [Takifugu
rubripes]
gi|225706442|gb|ACO09067.1| Ras-related protein Rab-6B [Osmerus mordax]
Length = 208
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
L Q TI + AK LN +SA NV ++ + + A L
Sbjct: 130 ---LEEKRQITI-EEGEQRAKELNVMFIETSAKTGCNVKQLFRRVAAAL 174
>gi|388515701|gb|AFK45912.1| unknown [Medicago truncatula]
Length = 200
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 73 HRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARI 132
H +L+A K+ LLGD GK+S + ++V + + G +TL V A +
Sbjct: 6 HNNLNA------KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATV 59
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPI 191
+ IW+ G + P+ + + A + ++D+TS + +W Q+ +K N +
Sbjct: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKKWVQELQKQGNPNMVMA 119
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G+K D D + A +AR YA+ LFF +SA NVN + I +L
Sbjct: 120 LAGSKSD-----LEDKRDVTAEEARVYAE--ENGLFFMETSAKSAANVNDVFYEIAKRL 171
>gi|325181447|emb|CCA15867.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
Query: 68 SLCHSHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLV 127
S+ HS D + +K+ L+GD +GK+ L +Y D G++ KT+ V
Sbjct: 1331 SMVHSSSKYD----LLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDV 1386
Query: 128 RGARISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQT 187
G R+ IW+ G + + + ++ IL ++D+T + +++ W Q ++ T
Sbjct: 1387 NGKRVKLQIWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNAST 1446
Query: 188 AI-PIIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITA 246
+ I+IG K D + + Q + A F +SA NIN++ I
Sbjct: 1447 NVNKILIGNKCD----VDPSERAVTTEQGQELADEFGIEFFETSAKSNINIDAAFHAIAV 1502
Query: 247 KL 248
+
Sbjct: 1503 DI 1504
>gi|111226256|ref|XP_635210.2| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208508|sp|P34141.2|RABA_DICDI RecName: Full=Ras-related protein RabA; Flags: Precursor
gi|90970434|gb|EAL61600.2| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K +GD +GK+S L ++ D + G++ KT+ + G I IW+ G
Sbjct: 9 FKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + H + A++ ++D+T + + ++V +W Q+ R I +IIG K D Q
Sbjct: 69 RFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQ 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
+D A+ +A +L+ T +SA IN+
Sbjct: 129 KVVD-----PFLAQEFADSLDITFKETSAKQAINI 158
>gi|332372776|gb|AEE61530.1| unknown [Dendroctonus ponderosae]
Length = 204
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 8/179 (4%)
Query: 76 LDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYS 135
+D D L LKI ++G+ +GK+S L ++ D + + G++ K L V G + +
Sbjct: 1 MDDDILTTLKILIIGESGVGKSSLLLRFTEDNFDPEQTLTIGVDFKTKKLNVEGNTVKLA 60
Query: 136 IWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPIII 193
IW+ G + + P +D+ + +FD+ S+ T + W + + +II
Sbjct: 61 IWDTAGQERFRTLTPSYYRDAQGAILVFDVGSQATFAKLETWLNELETYSTKNNIVKMII 120
Query: 194 GTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
G K D +D + QA A+A+ +SA V + + K+ P
Sbjct: 121 GNKID------VDHREVSREQAMAFARRHQTLYIEASAKTKHGVQAAFEELVHKIIQTP 173
>gi|332024332|gb|EGI64531.1| Ras-related protein RabJ [Acromyrmex echinatior]
Length = 219
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ +LG +GKTS + +YVG+ + SP + + + + +I +W+ G +
Sbjct: 7 KVIMLGSQGVGKTSLIGRYVGNVEHV--SPTIAASFFNCKINLEDVKIKLQVWDTAGQER 64
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQL 203
+ P+ + A L +FDLT T ++ W ++ ++ +T + ++IG K D +
Sbjct: 65 FRSMAPMYYRTCNAALLVFDLTQYSTFVAIKSWVKELQQNVEETMVLVLIGNKSDLVQKR 124
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + R YA + AT S YN V + I L
Sbjct: 125 QVD-----GEEGRRYATTIGATYHEISVLYNEGVKTVFLAIAMGL 164
>gi|183396450|gb|ACC62125.1| Rab40c, member RAS oncogene family (predicted) [Rhinolophus
ferrumequinum]
Length = 281
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
Q QARAYA+ T F S N NV +
Sbjct: 131 AFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNVTE 165
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK+ L +Y DE G+ +TL++ + IW+ G
Sbjct: 18 FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQE 77
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ + ++D+T R T + RW ++ R ++ + I+IG K D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSD---- 133
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+D + A+ +A+ +SA NV + ++F+I
Sbjct: 134 -LVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNI 181
>gi|417409313|gb|JAA51167.1| Putative gtp-binding protein, partial [Desmodus rotundus]
Length = 282
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 16 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 75
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 76 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 131
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINVNK 239
Q QARAYA+ T F S N NV +
Sbjct: 132 AFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNVTE 166
>gi|289547658|ref|NP_001166133.1| RAB40C, member RAS oncogene family [Gallus gallus]
gi|224069474|ref|XP_002192486.1| PREDICTED: ras-related protein Rab-40C [Taeniopygia guttata]
Length = 281
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGASESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
Q QARAYA+ T F S N NV
Sbjct: 131 AFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>gi|123389208|ref|XP_001299687.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|72536122|gb|AAZ73169.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121880590|gb|EAX86757.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ L+GD +GKTS + +++ + G++ K + V G + IW+ G K
Sbjct: 7 KVVLVGDSSVGKTSIINQFIYESISDEHQATVGIDFFSKQIEVDGKVVKMQIWDTAGQEK 66
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFD--DFIQ 202
+P +DS +F++D+TS + + RW + ++ + +G K D D Q
Sbjct: 67 FSSLIPSYIRDSTVAVFVYDITSEESFDHLERWTKLVSDIANPSL-VFVGNKTDLSDARQ 125
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFI 244
+PI+ + + Y++ SA N+ ++ + I
Sbjct: 126 VPIE-------RLQNYSEEKKGKFIEVSAKAPTNIKELFQMI 160
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L ++ DE + G+ + + + G + IW+ G
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + + L ++D+T T +SV RW Q+ C+ +++G K D
Sbjct: 73 RFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCD---- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D++ + +A A+ +SA NV+K + + ++F+
Sbjct: 129 -LEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFN 175
>gi|168061333|ref|XP_001782644.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665877|gb|EDQ52547.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%), Gaps = 8/174 (4%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ LKI ++G+ +GK+S L ++ + ++ P G++ K + ++G R+ +IW+ G
Sbjct: 10 ILLKIPVVGNSGVGKSSLLLRFAAGKFDELW-PTIGVDFKVKMMNLQGKRLKLTIWDTAG 68
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQARK--CNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T + W ++ + N+ I ++IG K D
Sbjct: 69 QERFRTLTSTYYRGAQGIILVYDVTRRATFTDLTNVWLKEVERFSTNKDCIKMLIGNKVD 128
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
L + +A A+AK +SA +INV + + K+ D P
Sbjct: 129 ----LEESERMVTKKEAIAFAKQHGCLFLEASAKTSINVQRCFNELVLKILDTP 178
>gi|66500451|ref|XP_623117.1| PREDICTED: ras-related protein Rab-39A [Apis mellifera]
Length = 218
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVR-GARISYSIWEVTGD 142
++ L+GD +GK+S L+ + + + P G++ + + V+ G RI +W+ G
Sbjct: 10 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARLIEVKDGTRIKLQLWDTAGQ 69
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI--IIGTKFDDF 200
+ + ++S+ L ++D+ +R + + + +W AR+ + P+ ++G K D
Sbjct: 70 ERFRSITKSYYRNSVGALLVYDVCNRASFEHIPQWMMDARRHIEPHRPVFALVGCKLD-- 127
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLT 260
+ + +ARA+A +SA +NV + + +T ++++ T E +
Sbjct: 128 LVTNGSRREVSKEEARAFADEHGVHHIETSAKTGVNVEEAFRTVTQEVYNRIQTGEYKVE 187
Query: 261 IG 262
G
Sbjct: 188 DG 189
>gi|348528226|ref|XP_003451619.1| PREDICTED: ras-related protein Rab-33B-like [Oreochromis niloticus]
Length = 234
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 15/185 (8%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
SH D + KI ++GD ++GKT ++ G + G++ ++TL + G
Sbjct: 25 SHHEYDTTHARIFKIIVIGDSNVGKTCLTYRFCGGTFLKNPEATIGVDFRERTLELDGES 84
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSI-AILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAI 189
I IW+ G + + + S+ A++F++D+TS + +S+ W Q+ +R +
Sbjct: 85 IKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVTSLSSFESIPEWIQECSRHSVGPLV 144
Query: 190 P-IIIGTKFD--DFIQLPIDLQWTIASQARAYAKALNATLFFSSA---TYNINVNKILKF 243
P I++G K D D ++P S A+ A + N LF +SA + NV+ I
Sbjct: 145 PRIMVGNKCDLRDRREVP-------TSAAQCLADSYNFPLFETSAKDPSEKENVDAIFLT 197
Query: 244 ITAKL 248
+ +L
Sbjct: 198 LAYRL 202
>gi|123479498|ref|XP_001322907.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121905761|gb|EAY10684.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 192
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
+V +K+ +G +GKT + + V + +P G + M K + V G +I+ +W+
Sbjct: 1 MVNVKVCFVGSSGVGKTCLINRTVNNSYLDTANPTVGASYMKKEVEVDGKQITLDLWDTA 60
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + P + S I+ ++ + + + WY+ + CN I++G+K D
Sbjct: 61 GQERYRALAPSFFRGSSVIVIVYSIIDATSFDDLRDWYENIQTNCNPIPRIIVVGSKADL 120
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ + + QA +AK++N F SA + +++ I +L
Sbjct: 121 H-----ETRLVPSQQAENFAKSINVDYFEVSALSGAGIEELMLSIATQL 164
>gi|12311684|emb|CAC24477.1| GTP binding protein [Cichorium intybus x Cichorium endivia]
Length = 200
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 73 HRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARI 132
H +L+A K+ LLGD GK+S + ++V + + G +TL V A +
Sbjct: 6 HNNLNA------KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATV 59
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPI 191
+ IW+ G + P+ + + A + ++D+TS + +W Q+ +K N +
Sbjct: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMA 119
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ LFF +SA NVN + I +L
Sbjct: 120 LAGNKAD-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKTAANVNDVFHEIAKRL 171
>gi|47212281|emb|CAF89513.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 12 SFKAVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNITGKRVNLAIWDTAGQ 71
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 72 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNDICLCIVGNKID--- 128
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
L D ++ +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 129 -LDKDRHVSV-EEAESYAESVGARHYHTSAKLNKGIEELFLDLCKRMMETAQAEER 182
>gi|392588635|gb|EIW77967.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 229
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDE--KEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
V +K+ L+G+ +GK+S L ++ ++ E + G++ + V G ++ SIW+
Sbjct: 17 VNVKLLLIGNASVGKSSLLLRFSDEQWLPEDEATATIGVDFRVHKMEVNGRKVKLSIWDT 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD 198
G + + + + I+ ++D+++R T +++ RW+ + + T + II+G K D
Sbjct: 77 AGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPRWFSEIETYVSPTVVRIIVGNKLD 136
Query: 199 --DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIP 252
+ Q+P S+ A+A+ +A +SA + V + + + + D P
Sbjct: 137 KENSRQVPT-------SEGAAFAERQDALFLEASAKTAVGVRETFEDVVRHILDTP 185
>gi|398403677|ref|XP_003853305.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
gi|339473187|gb|EGP88281.1| ras small GTPase related protein [Zymoseptoria tritici IPO323]
Length = 225
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTL-LVRGARISYSIWEVTGD 142
K+ LLG+ +GK+S + ++V D+ + G + +T+ L + + IW+ G
Sbjct: 19 FKLVLLGESAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTIALDEQTTVKFEIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFI 201
+ + P+ +++ + ++D+T +L W ++ R+ N+ I + G K D
Sbjct: 79 ERYKSLAPMYYRNANCAVVVYDITQASSLDKAKAWVKELQRQANENIIIALAGNKADLVA 138
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ P D + + A AYA+ N F +SA NV ++ I KL
Sbjct: 139 EQP-DKRAVPTADAEAYAREANLLFFETSAKTAENVKELFTAIAKKL 184
>gi|344237137|gb|EGV93240.1| Ras-related protein Rab-22A [Cricetulus griseus]
Length = 254
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 89 LGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAKAQDH 148
+ D +GK+S + ++V D + +P G + M KT+ + + IW+ G + +
Sbjct: 71 IKDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRAL 130
Query: 149 LPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQLPIDLQ 208
P+ + S A + ++D+T T ++ W ++ R+ +I + I D D++
Sbjct: 131 APMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL----TDVR 186
Query: 209 WTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+ A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 187 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 226
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRI 175
>gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus]
Length = 212
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 9 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 68
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + +W R + I +++G K D
Sbjct: 69 GQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIVLVGNKTD- 127
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
D + + AK LN +SA NV ++ + + A L + T + +
Sbjct: 128 ----LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTENKKV 183
Query: 260 TIGEPII 266
+ E ++
Sbjct: 184 DMTEVVL 190
>gi|340500151|gb|EGR27048.1| Ras oncogene family 2b protein, putative [Ichthyophthirius
multifiliis]
Length = 205
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+ +E+++ ++ E+ L M + G + +W+ G
Sbjct: 20 LKVILLGDSAVGKSKLVERFLLNDYEERNLSTYALTMYRHVANIDGKQYKIDLWDTAGQE 79
Query: 144 KAQD-HLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQ 202
+ Q H K ++ IL +FD+T + T ++ +WYQ+ R+ I+I K
Sbjct: 80 QFQTLHSSYYFKANVCIL-VFDITRKITYINLKKWYQEMREYCPDIPCILIANK------ 132
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
ID+ + ++ +A N +F SA NV K+
Sbjct: 133 --IDVDRDVTNKQFKFASQNNLPFYFVSAADGTNVVKVF 169
>gi|356569718|ref|XP_003553043.1| PREDICTED: ras-related protein RHN1-like [Glycine max]
Length = 200
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 73 HRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARI 132
H +L+A K+ LLGD GK+S + ++V + + G +TL V A +
Sbjct: 6 HNNLNA------KLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATV 59
Query: 133 SYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPI 191
+ IW+ G + P+ + + A + ++D+TS + +W Q+ +K N +
Sbjct: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMA 119
Query: 192 IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ LFF +SA NVN I I +L
Sbjct: 120 LAGNKAD-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKTASNVNDIFYEIAKRL 171
>gi|323454773|gb|EGB10642.1| hypothetical protein AURANDRAFT_22182 [Aureococcus anophagefferens]
Length = 210
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 22/188 (11%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGE----GLNMMDKTLLVR-GARISYSIWE 138
K+ LLG+ +GKTS L +YV E+ S + + +DK L +R G S SIW+
Sbjct: 6 FKVVLLGEGRVGKTSILLRYVKGERVPAYSDRQVSTLQASYLDKRLSLRAGQSASLSIWD 65
Query: 139 VTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIII-GTKF 197
G + P+ +D+ L ++D+T + + V +W ++ R+ I I I G K
Sbjct: 66 TAGQERFHALGPIYYRDADGALLVYDITDFESFQKVRKWVRELRQIVGQEIAITIAGNK- 124
Query: 198 DDFIQLPIDLQWTIA---SQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWT 254
+DL+ + A ++A YA ++ AT ++SA N + ++ ++
Sbjct: 125 -------VDLESSRAVPEAEALDYAASVGATHVYTSAKLNKGLEDAFAELSERM-----A 172
Query: 255 LERNLTIG 262
RN T G
Sbjct: 173 TRRNETRG 180
>gi|294888433|ref|XP_002772463.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239876689|gb|EER04279.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR-ISYSIWEVTGDA 143
K+ LGD +GKTS + +++ + G++ + K + + R I +W+ G
Sbjct: 20 KVIFLGDQSVGKTSIITRFLYGAFDTHYQATIGIDFVAKVITLDDGRMIKLQLWDTAGQE 79
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR--KCNQTAIPII-IGTKFDDF 200
+ + +P +D+ A + +FDL+S+ + SV W Q R K + I+ +G K D
Sbjct: 80 RFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSWVDQVRDEKGTNGGVEIVLVGNKAD-- 137
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
DL+ +A A A+ L F +SA I++++I I +
Sbjct: 138 ---MADLRQVSNEEASALAEELGLKYFETSAKSGIDIDEIFTEIAKSI 182
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,131,204,686
Number of Sequences: 23463169
Number of extensions: 168489208
Number of successful extensions: 618848
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4891
Number of HSP's successfully gapped in prelim test: 6468
Number of HSP's that attempted gapping in prelim test: 607688
Number of HSP's gapped (non-prelim): 11467
length of query: 268
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 128
effective length of database: 9,074,351,707
effective search space: 1161517018496
effective search space used: 1161517018496
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)