BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041042
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P87027|SPG1_SCHPO Septum-promoting GTP-binding protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spg1 PE=1 SV=1
Length = 198
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 127/189 (67%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +K+ ++GD IGKTS + YV ++ + G+N M+KT+ +R I++SIW++
Sbjct: 7 NNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDL 66
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+ C D++AILFMFDL+ + TL S+ WY+QAR N+TA+PI+IGTK+D
Sbjct: 67 GGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYDH 126
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
F+ P + Q I QAR YAKA+ A+L F S +++INV KI K + AK+FD+ T+
Sbjct: 127 FMTFPREDQEEITKQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEIK 186
Query: 260 TIGEPIIDF 268
+G+PI+++
Sbjct: 187 NVGDPILEY 195
>sp|P38987|TEM1_YEAST Protein TEM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TEM1 PE=1 SV=1
Length = 245
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 112/189 (59%)
Query: 80 NLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEV 139
N V +++ L+GD +GKTS + KYV + ++ + G+N + + + +R I +SI ++
Sbjct: 17 NQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDL 76
Query: 140 TGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDD 199
G + + LP+A S I+F+FDLT TL S+ WY+QA N +AIPI++GTK+D
Sbjct: 77 GGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQAYGLNDSAIPILVGTKYDL 136
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
I L + Q I+ + YA+ +NA L F S +IN+ KI K AK+F++ T+
Sbjct: 137 LIDLDPEYQEQISRTSMKYAQVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEIN 196
Query: 260 TIGEPIIDF 268
IG+P++ +
Sbjct: 197 EIGDPLLIY 205
>sp|Q9UL26|RB22A_HUMAN Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2
Length = 194
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>sp|P35285|RB22A_MOUSE Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2
Length = 194
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + + P+ + S A + ++D+T T ++ W ++ R+ +I + I D
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
D++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----TDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>sp|P51154|RB22A_CANFA Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1
Length = 194
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L LK+ LLGD +GK+S + ++V D + +P G + M KT+ + + IW+
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDF 200
G + P+ + S A + ++D+T T ++ W ++ R+ I + I D
Sbjct: 63 GQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
ID++ + A+ YA +++A +SA IN+N++ I+ ++
Sbjct: 123 ----IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166
>sp|Q9VP48|RAB26_DROME Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=2
SV=2
Length = 388
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 79 DNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGG-SPGEGLNMMDKTLLVRGARISYSIW 137
D+ V K LLGD +GKTSFL KY E G S G+ + +K ++V G R+ IW
Sbjct: 186 DDTVNHKTILLGDSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIW 245
Query: 138 EVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPII-IGTK 196
+ G + + +D+ A+L ++D+T++ T ++ W + R+ Q + I+ IG K
Sbjct: 246 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNK 305
Query: 197 FD 198
D
Sbjct: 306 AD 307
>sp|Q921E2|RAB31_MOUSE Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1
Length = 194
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>sp|O80501|RAH1B_ARATH Ras-related protein RABH1b OS=Arabidopsis thaliana GN=RABH1B PE=1
SV=1
Length = 208
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + G++ + KT+ + + +W+
Sbjct: 7 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+ SR + + +W + R + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTD- 125
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + +A A A+ LN +SA N+ + + I A L
Sbjct: 126 ----LVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAAL 170
>sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=1 SV=2
Length = 194
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGALVVETSAKNAINIEELFQGISRQI 166
>sp|Q13636|RAB31_HUMAN Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1
Length = 194
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK+ LLGD +GK+S + ++V D + SP G + M KT+ + IW+ G
Sbjct: 6 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFD--DF 200
+ P+ + S A + ++D+T + + ++ +W ++ ++ + + I G K D D
Sbjct: 66 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 125
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++P+ A+ YA+++ A + +SA IN+ ++ + I+ ++
Sbjct: 126 REVPL-------KDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 166
>sp|P07560|SEC4_YEAST Ras-related protein SEC4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC4 PE=1 SV=1
Length = 215
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNLTIG 262
++ + A Q A AK L SSA + NVN+I F AKL I ++ N +G
Sbjct: 137 --METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIF-FTLAKL--IQEKIDSNKLVG 191
>sp|O49841|RAC2A_ARATH Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1
SV=1
Length = 210
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 9/180 (5%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
++ KI L+GD +GK+S L ++ E +P G++ K L V G R+ +IW+ G
Sbjct: 12 LSFKILLIGDSGVGKSSLLVSFISSSVEDL-APTIGVDFKIKQLTVGGKRLKLTIWDTAG 70
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIR-WYQQAR--KCNQTAIPIIIGTKFD 198
+ + + + I+ ++D+T R T +++ W ++ NQ + +++G K D
Sbjct: 71 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVD 130
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERN 258
+ + + I A AK LN SA NV + + + K+ ++P LE
Sbjct: 131 RESERGVSREEGI-----ALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLEEG 185
>sp|Q9SMR4|RAH1C_ARATH Ras-related protein RABH1c OS=Arabidopsis thaliana GN=RABH1C PE=1
SV=1
Length = 214
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LGD +GKTS + +++ D+ + P G++ + KT+ + + +W+
Sbjct: 7 LAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTA 66
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQA--RKCNQTAIPIIIGTKFD 198
G + + +P +DS + ++D+++R T + +W + + I +++G K D
Sbjct: 67 GQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTD 126
Query: 199 DFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
++ + S+ K +SA N N+ + + I A L
Sbjct: 127 -----LVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171
>sp|P55745|RAB21_CANFA Ras-related protein Rab-21 OS=Canis familiaris GN=RAB21 PE=3 SV=3
Length = 223
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>sp|P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia GN=RHN1 PE=2
SV=1
Length = 200
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
SH +L+A K+ LLGD GK+S + ++V + + G TL V A
Sbjct: 5 SHNNLNA------KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNAT 58
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP 190
+ + IW+ G + P+ + + A + ++D+TS + +W Q+ +K N +
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVM 118
Query: 191 IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ LFF +SA +NVN I I +L
Sbjct: 119 ALAGNKAD-----LEDRRKVTAEEARLYAE--ENGLFFMETSAKTAVNVNAIFYEIAKRL 171
>sp|Q9UL25|RAB21_HUMAN Ras-related protein Rab-21 OS=Homo sapiens GN=RAB21 PE=1 SV=3
Length = 225
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 19 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 78
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 79 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 138
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 139 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 189
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>sp|Q17R06|RAB21_BOVIN Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1
Length = 222
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 16 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 75
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 76 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEK 135
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 136 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 186
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + I I ++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>sp|P35282|RAB21_MOUSE Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=4
Length = 222
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>sp|Q1KME6|RAB6A_CHICK Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3
Length = 208
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + I +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS A + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +++
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>sp|Q6AXT5|RAB21_RAT Ras-related protein Rab-21 OS=Rattus norvegicus GN=Rab21 PE=2 SV=1
Length = 223
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 83 ALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGD 142
+ K+ LLG+ +GKTS + +Y ++ + + K L + G R++ +IW+ G
Sbjct: 17 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 76
Query: 143 AKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-IIGTKFDDFI 201
+ P+ +DS + ++D+T + + V W ++ RK I + I+G K D
Sbjct: 77 ERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136
Query: 202 QLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLER 257
+ + +Q +A +YA+++ A + +SA N + ++ + ++ + ER
Sbjct: 137 ERHVSIQ-----EAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDER 187
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK++ L ++ +E G+ +++ V G I IW+ G
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFD--DF 200
+ + + ++ L ++D+ T ++V RW ++ R + + +++G K D
Sbjct: 72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 131
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+P D +ARA+A+ N + +SA + NV + K I +++ I
Sbjct: 132 RAVPTD-------EARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 175
>sp|Q5RAV6|RAB6A_PONAB Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3
Length = 208
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>sp|P20340|RAB6A_HUMAN Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3
Length = 208
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>sp|Q9WVB1|RAB6A_RAT Ras-related protein Rab-6A OS=Rattus norvegicus GN=Rab6a PE=2 SV=2
Length = 208
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>sp|P35279|RAB6A_MOUSE Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4
Length = 208
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 9/188 (4%)
Query: 81 LVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVT 140
L K+ LG+ +GKTS + +++ D + G++ + KT+ + + +W+
Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
Query: 141 GDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDD 199
G + + +P +DS + ++D+T+ + + +W R + I +++G K D
Sbjct: 71 GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD- 129
Query: 200 FIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDIPWTLERNL 259
L Q +I R AK LN +SA NV ++ + + A L + T +R+
Sbjct: 130 ---LADKRQVSIEEGERK-AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSR 185
Query: 260 TIGEPIID 267
E +ID
Sbjct: 186 ---EDMID 190
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 7/181 (3%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
+HR ++ D KI L+GD +GKT+ L ++ +E G+ +TL V G
Sbjct: 2 AHR-VEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
+ IW+ G + + + ++ L ++D+T R T +V+RW ++ R + I I
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 192 IIGTKFDDFIQLPIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
++ D L ++A + + A+ + +SA NV K + + A+++
Sbjct: 121 MMAGNKADLNHLR-----SVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYH 175
Query: 251 I 251
I
Sbjct: 176 I 176
>sp|O42819|SEC4_CANGA Ras-related protein SEC4 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC4 PE=3
SV=1
Length = 215
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+KI L+GD +GK+ L ++V D+ G++ KT+ + G ++ +W+ G
Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T T ++ +W++ + N A +++G K D
Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSD---- 136
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKL 248
+D + Q A AK L SSA + NVN+I F A+L
Sbjct: 137 --MDTRVVTYEQGEALAKELGLPFIESSAKNDDNVNEIF-FTLARL 179
>sp|Q9SN68|RAF2B_ARATH Ras-related protein RABF2b OS=Arabidopsis thaliana GN=RABF2B PE=1
SV=1
Length = 200
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+D + A A+ YA+ LFF +SA NV +I I +L
Sbjct: 127 LLDARKVTAEDAQTYAQ--ENGLFFMETSAKTATNVKEIFYEIARRL 171
>sp|P31582|RAF2A_ARATH Ras-related protein RABF2a OS=Arabidopsis thaliana GN=RABF2A PE=1
SV=1
Length = 200
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 85 KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDAK 144
K+ LLGD GK+S + ++V D+ + G +TL V A + + IW+ G +
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 145 AQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQL 203
P+ + + A + +FD+T++ + + +W Q+ + + N + + G K D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKAD----- 126
Query: 204 PIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+D + A +A YA+ +LFF +SA NV I I +L
Sbjct: 127 LLDARKVSAEEAEIYAQ--ENSLFFMETSAKTATNVKDIFYEIAKRL 171
>sp|P0CY30|SEC4_CANAX Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1
Length = 210
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V W+Q + N+ A ++G K DD +
Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVN 134
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + Q + A LN +SA N NV+ I
Sbjct: 135 RQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSIF 168
>sp|C4YL11|SEC4_CANAW Ras-related protein SEC4 OS=Candida albicans (strain WO-1) GN=SEC4
PE=3 SV=1
Length = 210
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V W+Q + N+ A ++G K DD +
Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVN 134
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + Q + A LN +SA N NV+ I
Sbjct: 135 RQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSIF 168
>sp|P0CY31|SEC4_CANAL Ras-related protein SEC4 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SEC4 PE=3 SV=1
Length = 210
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
+K+ L+GD +GK+ L ++V D+ G++ +T+ +G RI +W+ G
Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ I+ ++D+T + ++V W+Q + N+ A ++G K DD +
Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVN 134
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKIL 241
+ + Q + A LN +SA N NV+ I
Sbjct: 135 RQVSKE-----QGQELAAKLNVPFLEASAKSNENVDSIF 168
>sp|Q86JC8|RABH_DICDI Ras-related protein RabH OS=Dictyostelium discoideum GN=rabH PE=3
SV=1
Length = 198
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 82 VALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTG 141
+ LK++++GD ++GK+S L ++ D + G + KT+L+RG I I + +G
Sbjct: 6 IKLKLTIIGDWNVGKSSLLYRFFNDVFYEQTKLSMGEHFFYKTVLIRGESIDLQITDTSG 65
Query: 142 DAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDF 200
K + + IL ++D++ + T ++ W +A K + I II+ +KFD
Sbjct: 66 MEKFRSLNNSFYSNLDGILIVYDISDQETFENTKLWLNEANKLAPKDCIKIIVASKFD-- 123
Query: 201 IQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFIT 245
++ + ++ ++YA LN F +S+ +INV + FIT
Sbjct: 124 ----LENKVVDSNIVKSYADNLNLKFFETSSKNSINVEET--FIT 162
>sp|P25228|RAB3_DROME Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1
SV=1
Length = 220
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ ++G+ +GKTSFL +Y D G++ KT+ R+ IW+ G
Sbjct: 22 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCN-QTAIPIIIGTKFDDFIQ 202
+ + + ++ + M+D+T+ + SV W Q + + A I++G K D Q
Sbjct: 82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQ 141
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILK 242
I + + R A L F +SA N+NV + +
Sbjct: 142 RVISFE-----RGRQLADQLGVEFFETSAKENVNVKAVFE 176
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L ++ +E G+ +TL V G + IW+ G
Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + ++ L ++D+T R T ++V+RW ++ R + I I++ D L
Sbjct: 73 RYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHL 132
Query: 204 PIDLQWTIASQ-ARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
++A + R+ A+ + +SA N+ K + I ++++ I
Sbjct: 133 R-----SVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHI 176
>sp|P35283|RAB12_MOUSE Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3
Length = 243
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 101
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 102 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 161
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 162 REISRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRN 214
>sp|Q6IQ22|RAB12_HUMAN Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=1 SV=3
Length = 244
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 103 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 162
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A+ + F +SA N NV++I LK + L +P + RN
Sbjct: 163 REITRQ-----QGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 215
>sp|P29687|RAB5_TOBAC Ras-related protein Rab5 OS=Nicotiana tabacum GN=RAB5 PE=2 SV=1
Length = 200
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 72 SHRHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
S RH +NL A K+ LLGD GK+S + ++V + + G T+ V A
Sbjct: 3 SRRH---NNLNA-KLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNAT 58
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIP 190
+ + IW+ G + P+ + + A + ++D+TS +L +W Q+ +K N +
Sbjct: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVM 118
Query: 191 IIIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFF--SSATYNINVNKILKFITAKL 248
+ G K D D + A +AR YA+ LFF +SA NVN I I +L
Sbjct: 119 ALAGNKAD-----LEDKRKVTAEEARLYAE--ENGLFFMETSAKTATNVNDIFYEIAKRL 171
>sp|P34141|RABA_DICDI Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2
SV=2
Length = 201
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K +GD +GK+S L ++ D + G++ KT+ + G I IW+ G
Sbjct: 9 FKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQE 68
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQ-ARKCNQTAIPIIIGTKFDDFIQ 202
+ + H + A++ ++D+T + + ++V +W Q+ R I +IIG K D Q
Sbjct: 69 RFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQ 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
+D A+ +A +L+ T +SA IN+
Sbjct: 129 KVVD-----PFLAQEFADSLDITFKETSAKQAINI 158
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
K+ L+GD +GK+ L +Y DE G+ +TL++ + IW+ G
Sbjct: 18 FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQE 77
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + ++ + ++D+T R T + RW ++ R ++ + I+IG K D
Sbjct: 78 RYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSD---- 133
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
+D + A+ +A+ +SA NV + ++F+I
Sbjct: 134 -LVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNI 181
>sp|Q9SRS5|RAA5B_ARATH Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2
SV=1
Length = 217
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
KI L+GD +GK++ L ++ DE + G+ + + + G + IW+ G
Sbjct: 13 FKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQE 72
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQAR-KCNQTAIPIIIGTKFDDFIQ 202
+ + + + L ++D+T T +SV RW Q+ C+ +++G K D
Sbjct: 73 RFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCD---- 128
Query: 203 LPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFD 250
D++ + +A A+ +SA NV+K + + ++F+
Sbjct: 129 -LEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFN 175
>sp|A5WW21|RASEF_DANRE Ras and EF-hand domain-containing protein OS=Danio rerio GN=rasef
PE=2 SV=1
Length = 663
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 11/230 (4%)
Query: 13 GVLILRRCISCFWEKLLMCSVGKPIRYRMLPRSTVTSPSPSVLESGLVPGTTVRPSLCHS 72
V + SC +L + V KP R + RSTV S S S L + P +
Sbjct: 402 SVETVHHSYSCVPSELEVSEV-KPEALRSVARSTVGSIS-----SSLRRRLSAFPVKQNE 455
Query: 73 HRHLDADNLVAL-KISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGAR 131
LD +L + ++ L GD GK+SFL + +E G++ K +LV G +
Sbjct: 456 EDLLDTQDLAPVYRLVLAGDAGSGKSSFLLRLSLNEFRGDIQTTLGVDFQIKKMLVDGEK 515
Query: 132 ISYSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI 191
+ IW+ G + + + + +L ++D+TS + +V W +Q R+ IP+
Sbjct: 516 TNLQIWDTAGQERFRSIARSYFRKAHGVLLLYDVTSESSFLNVREWVEQIRESTDEDIPM 575
Query: 192 -IIGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKI 240
IIG K D P + + S A+N F A+ N I
Sbjct: 576 CIIGNKVDLRAARP---EGSCVSSIHGEKLAMNYNALFCEASAKEGTNVI 622
>sp|Q8VHQ4|RB40C_MOUSE Ras-related protein Rab-40C OS=Mus musculus GN=Rab40c PE=2 SV=1
Length = 281
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
Q QARAYA+ T F S N NV
Sbjct: 131 AFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>sp|Q96S21|RB40C_HUMAN Ras-related protein Rab-40C OS=Homo sapiens GN=RAB40C PE=1 SV=1
Length = 281
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
LK L+GD +GK LE E + G++ T+L+ G R+ +W+ +G
Sbjct: 15 LKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQG 74
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPIIIGTKFDDFIQL 203
+ + + IL ++D+T+R + + RW ++ + I++G + + L
Sbjct: 75 RFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNR----LHL 130
Query: 204 PIDLQWTIASQARAYAKALNATLFFSSATYNINV 237
Q QARAYA+ T F S N NV
Sbjct: 131 AFKRQ-VPTEQARAYAEKNCMTFFEVSPLCNFNV 163
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 74 RHLDADNLVALKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARIS 133
R D + K+ L+GD +GK++ L ++ +E G+ +TL V G +
Sbjct: 3 RRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVK 62
Query: 134 YSIWEVTGDAKAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARKCNQTAIPI-I 192
IW+ G + + + ++ L ++D+T T ++V RW ++ R + I I +
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIML 122
Query: 193 IGTKFDDFIQLPIDLQWTIASQARAYAKALNATLFFSSATYNINVNKILKFITAKLFDI 251
IG K D L+ A++YA+ + +SA +NV K + I ++++ I
Sbjct: 123 IGNKTD-----LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRI 176
>sp|P51152|RAB12_CANFA Ras-related protein Rab-12 (Fragment) OS=Canis familiaris GN=RAB12
PE=2 SV=1
Length = 208
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 84 LKISLLGDCHIGKTSFLEKYVGDEKEQGGSPGEGLNMMDKTLLVRGARISYSIWEVTGDA 143
L++ ++G +GKTS +E++ D + G++ KT+ +RG +I IW+ G
Sbjct: 7 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 66
Query: 144 KAQDHLPVACKDSIAILFMFDLTSRCTLKSVIRWYQQARK-CNQTAIPIIIGTKFDDFIQ 202
+ + + I+ ++D+T + T + +W + K ++ A +++G K D
Sbjct: 67 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETD 126
Query: 203 LPIDLQWTIASQARAYAKALNATLFF-SSATYNINVNKI-LKFITAKLFDIPWTLERN 258
I Q Q +A + F +SA N NV++I LK + L +P + RN
Sbjct: 127 REITRQ-----QGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRN 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,588,953
Number of Sequences: 539616
Number of extensions: 3986937
Number of successful extensions: 12568
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 11862
Number of HSP's gapped (non-prelim): 608
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)