Your job contains 1 sequence.
>041048
EGKRSCIFYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQ
LWFDIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSKQCHV
PIEKDKEKNSSLRILPPLRAPCPDPFSPATKVLDEGVCYKCNKDSTSGVKIEYLHIPKDE
HNQETAFHCPQDKGIQFKNTSDEVGLRWRAVTTEEKKRTVHAAEMYKSSNPLFRVILRPS
YVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRCIFKNGGAKFSKGWPEFVWEN
NLDESDVCVFELIKSNDVTLKATIFRVLEDARPVY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041048
(335 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085849 - symbol:VRN1 "REDUCED VERNALIZATION R... 657 1.8e-64 1
TAIR|locus:2010262 - symbol:RTV1 "AT1G49480" species:3702... 370 4.6e-34 1
TAIR|locus:2133362 - symbol:AT4G01580 species:3702 "Arabi... 238 4.4e-20 1
TAIR|locus:2085859 - symbol:AT3G18960 species:3702 "Arabi... 236 7.2e-20 1
TAIR|locus:504956318 - symbol:AT1G49475 species:3702 "Ara... 217 9.0e-18 1
TAIR|locus:2144831 - symbol:AT5G09780 species:3702 "Arabi... 140 1.8e-12 2
TAIR|locus:2158108 - symbol:AT5G66980 species:3702 "Arabi... 123 1.8e-12 2
TAIR|locus:2119166 - symbol:AT4G33280 species:3702 "Arabi... 117 9.6e-12 2
TAIR|locus:2086082 - symbol:REM22 "REPRODUCTIVE MERISTEM ... 122 1.5e-10 2
TAIR|locus:2172319 - symbol:AT5G18090 species:3702 "Arabi... 109 5.8e-10 2
TAIR|locus:2052991 - symbol:AT2G16210 species:3702 "Arabi... 113 1.8e-09 2
TAIR|locus:2164180 - symbol:AT5G60130 species:3702 "Arabi... 152 2.6e-08 1
TAIR|locus:2063434 - symbol:AT2G35310 species:3702 "Arabi... 117 6.9e-08 2
TAIR|locus:2164135 - symbol:AT5G60140 species:3702 "Arabi... 146 1.3e-07 1
TAIR|locus:2124824 - symbol:AT4G31680 species:3702 "Arabi... 111 2.7e-06 2
TAIR|locus:2124839 - symbol:AT4G31690 species:3702 "Arabi... 106 6.2e-06 2
TAIR|locus:2124889 - symbol:AT4G31650 species:3702 "Arabi... 97 7.0e-06 2
TAIR|locus:2083921 - symbol:AT3G53310 species:3702 "Arabi... 129 8.4e-06 1
TAIR|locus:2017953 - symbol:AT1G16640 species:3702 "Arabi... 104 4.1e-05 1
TAIR|locus:2124864 - symbol:AT4G31630 species:3702 "Arabi... 93 8.8e-05 2
TAIR|locus:2047241 - symbol:AT2G24700 species:3702 "Arabi... 85 0.00012 2
TAIR|locus:2161533 - symbol:VDD "VERDANDI" species:3702 "... 118 0.00018 1
TAIR|locus:2124879 - symbol:AT4G31640 species:3702 "Arabi... 117 0.00030 1
TAIR|locus:2126016 - symbol:MEE45 "maternal effect embryo... 93 0.00039 2
TAIR|locus:2082480 - symbol:AT3G06220 species:3702 "Arabi... 107 0.00054 1
TAIR|locus:2165497 - symbol:AT5G42700 species:3702 "Arabi... 108 0.00096 1
>TAIR|locus:2085849 [details] [associations]
symbol:VRN1 "REDUCED VERNALIZATION RESPONSE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0010048
"vernalization response" evidence=IMP] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010048 GO:GO:0009909 EMBL:AP000735
UniGene:At.27524 UniGene:At.24480 HOGENOM:HOG000005864
EMBL:AF289051 EMBL:AF289052 EMBL:BT024731 EMBL:AK230388
EMBL:AB493620 IPI:IPI00546581 RefSeq:NP_188529.2 PDB:4I1K
PDBsum:4I1K ProteinModelPortal:Q8L3W1 SMR:Q8L3W1 IntAct:Q8L3W1
STRING:Q8L3W1 PaxDb:Q8L3W1 PRIDE:Q8L3W1 DNASU:821432
EnsemblPlants:AT3G18990.1 GeneID:821432 KEGG:ath:AT3G18990
TAIR:At3g18990 eggNOG:NOG315946 InParanoid:Q8L3W1 OMA:EINSSAP
PhylomeDB:Q8L3W1 ProtClustDB:CLSN2679965 Genevestigator:Q8L3W1
Uniprot:Q8L3W1
Length = 341
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 146/337 (43%), Positives = 205/337 (60%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGW 67
F+KLI S +Q+K+LR+PDKFV KF DELS T+P G +W V L+K + ++WF GW
Sbjct: 6 FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGW 65
Query: 68 HEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPS--LEEPSDSKQCHVPIEKD 125
EF++ SI GY LIF+Y+GNS F+VYIF+L+ SEI Y S L + + + + +D
Sbjct: 66 QEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFED 125
Query: 126 KEKNSSLRILPPLRAPCPDPFSPATKVLDEGVCYKCNKDSTSG-VKIEYL----HIPKD- 179
E + I P P P P S T ++G + +G VK E IPK
Sbjct: 126 LEDEDAEVIFPSSVYPSPLPES--TVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKR 183
Query: 180 ---EHN---QETAFHCPQDKGIQFKNTSDE-VGLRWRAVTTEEKKRTVHAAEMYKSSNPL 232
+ N +E P+D + ++ E R R VT EE++R ++AA+ ++ +NP
Sbjct: 184 GRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPF 243
Query: 233 FRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRCIFKNGGAKFSKG 292
FRV+LRPSY+YR ++++P+ FA KYL+GI G+I + + KQWPVRC++K G AKFS+G
Sbjct: 244 FRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYKAGRAKFSQG 302
Query: 293 WPEFVWENNLDESDVCVFELIKSNDVTLKATIFRVLE 329
W EF ENNL E DVCVFEL+++ D LK T FRV E
Sbjct: 303 WYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRVNE 339
>TAIR|locus:2010262 [details] [associations]
symbol:RTV1 "AT1G49480" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0032880 "regulation of protein localization" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0034613 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007504 EMBL:AY042868 EMBL:BT015682
IPI:IPI00517706 PIR:E96531 RefSeq:NP_564547.1 UniGene:At.24480
UniGene:At.70635 ProteinModelPortal:Q9XIB5 SMR:Q9XIB5 PaxDb:Q9XIB5
PRIDE:Q9XIB5 EnsemblPlants:AT1G49480.1 GeneID:841372
KEGG:ath:AT1G49480 TAIR:At1g49480 eggNOG:NOG265541
HOGENOM:HOG000005864 InParanoid:Q9XIB5 OMA:FKESKAE PhylomeDB:Q9XIB5
ProtClustDB:CLSN2917203 Genevestigator:Q9XIB5 Uniprot:Q9XIB5
Length = 226
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 67/128 (52%), Positives = 93/128 (72%)
Query: 202 DEVGLRWRAVTTEEKKRTVHAAEMYKSSNPLFRVILRPSYVYRTLLLHVPTSFARKYLNG 261
+ R R VT EE++R V+AA+ ++ +NP FRV+LRPSY+YR ++++P+ FA KYL+G
Sbjct: 98 ESASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSG 157
Query: 262 IKGYITIIDSNGKQWPVRCIFKNGGAKFSKGWPEFVWENNLDESDVCVFELIKSNDVTLK 321
I G+I + KQWPVRC++K G AKFS+GW EF ENN+ E DVCVFEL+++ D L+
Sbjct: 158 ISGFIKL-QLGEKQWPVRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLE 216
Query: 322 ATIFRVLE 329
T FRV E
Sbjct: 217 VTAFRVNE 224
>TAIR|locus:2133362 [details] [associations]
symbol:AT4G01580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161492 EMBL:AF104919 UniGene:At.34404
HOGENOM:HOG000155078 ProtClustDB:CLSN2685511 EMBL:BT010604
EMBL:AK175333 IPI:IPI00544726 PIR:T02015 RefSeq:NP_192068.1
ProteinModelPortal:Q9ZSH7 SMR:Q9ZSH7 IntAct:Q9ZSH7 STRING:Q9ZSH7
EnsemblPlants:AT4G01580.1 GeneID:828118 KEGG:ath:AT4G01580
TAIR:At4g01580 PhylomeDB:Q9ZSH7 Genevestigator:Q9ZSH7
Uniprot:Q9ZSH7
Length = 190
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGW 67
F+KL++PS ++DK +RIP +FV+ G +LS + P+G ++LK+ +++WF GW
Sbjct: 30 FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGW 89
Query: 68 HEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYP 107
EF E SI G+FL+F+Y+ NS+F V IF+ + E YP
Sbjct: 90 SEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129
>TAIR|locus:2085859 [details] [associations]
symbol:AT3G18960 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AP000735 UniGene:At.34404 UniGene:At.66475
HOGENOM:HOG000155078 ProtClustDB:CLSN2685511 EMBL:BT006139
EMBL:BT008541 EMBL:AK229681 IPI:IPI00539394 RefSeq:NP_188526.2
ProteinModelPortal:Q84R27 SMR:Q84R27 IntAct:Q84R27
EnsemblPlants:AT3G18960.1 GeneID:821429 KEGG:ath:AT3G18960
TAIR:At3g18960 PhylomeDB:Q84R27 Genevestigator:Q84R27
Uniprot:Q84R27
Length = 209
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 41/100 (41%), Positives = 68/100 (68%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGW 67
F+KL++PS ++DK ++IP +FV+ G +LS + P+G ++LK+ +++WF GW
Sbjct: 30 FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGW 89
Query: 68 HEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYP 107
EF E SI G+FL+F+Y+ NS+F V IF+++ E +YP
Sbjct: 90 SEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129
>TAIR|locus:504956318 [details] [associations]
symbol:AT1G49475 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007504 EMBL:BX817688 IPI:IPI00524854
PIR:D96531 RefSeq:NP_683415.2 UniGene:At.49960
ProteinModelPortal:Q9XIB4 SMR:Q9XIB4 EnsemblPlants:AT1G49475.1
GeneID:841371 KEGG:ath:AT1G49475 TAIR:At1g49475 eggNOG:NOG287861
HOGENOM:HOG000155078 OMA:PRVNIKS PhylomeDB:Q9XIB4
ProtClustDB:CLSN2685511 Genevestigator:Q9XIB4 Uniprot:Q9XIB4
Length = 190
Score = 217 (81.4 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 42/110 (38%), Positives = 70/110 (63%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGW 67
F K+I+ S + +K +++P +FV +FG +L+ P G + +K+ ++WF+ GW
Sbjct: 34 FIKIILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGW 92
Query: 68 HEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSKQ 117
EF E S+ G+FL F Y+G+S F V IFD++ SEIEYP L++ D+++
Sbjct: 93 SEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYP-LDDTDDNRE 141
>TAIR|locus:2144831 [details] [associations]
symbol:AT5G09780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB020752 EMBL:AL353994 EMBL:DQ056675
IPI:IPI00528395 PIR:T49920 RefSeq:NP_196540.1 UniGene:At.54791
ProteinModelPortal:Q9LXE1 SMR:Q9LXE1 EnsemblPlants:AT5G09780.1
GeneID:830838 KEGG:ath:AT5G09780 TAIR:At5g09780 eggNOG:NOG289999
HOGENOM:HOG000131629 InParanoid:Q9LXE1 OMA:SKRTERV PhylomeDB:Q9LXE1
ProtClustDB:CLSN2681146 Genevestigator:Q9LXE1 Uniprot:Q9LXE1
Length = 308
Score = 140 (54.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 1 EGKRSCIFYKLIVPSILQDKKLR-IPDKFVQKFGD-ELSSIAKFTIPSGRMWFVELKKCN 58
E ++ F+K++ S + + R IP FV F D ELS KF + G W V++ K N
Sbjct: 12 EERKQESFFKVLKRSDMSSEDTRAIPYDFVINFSDNELSGDMKFRVQWGNSWKVKISK-N 70
Query: 59 KQLWF--DIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSK 116
+ +F GW +F+ ++ FL F ++G +F V IF+ E+ P S +
Sbjct: 71 PRFYFMEKSGWEKFVIDNALGDHEFLTFTHKGQMSFTVKIFNKDGKEMMQPPQSRASFAS 130
Query: 117 QCHVPIEKDKEKNSSLRILPPLRAPCP 143
V E+D ++ + + R+ P
Sbjct: 131 SSRVKTEQDVKREEEVLVSSDSRSRGP 157
Score = 90 (36.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 37/131 (28%), Positives = 53/131 (40%)
Query: 198 KNTSDEVGLRWRAVTTEEKKRT---VHAAEMY----KSSNPLFRVILRPSYVYRTLLLHV 250
K ++E R T+ KRT V +Y SS F++ + SY+ L +
Sbjct: 177 KKKAEETQTYKRTERTQNSKRTERVVSKERVYAGEPSSSVAGFKIFISKSYIKS---LAI 233
Query: 251 PTSFARKYLNGIKGYITIIDSNG-KQWPVRCIFKNGGAKFSKGWPEFVWENNLDESDVCV 309
P F Y+ K + I +G K W V + K G FS GW E + D C
Sbjct: 234 PKPFGN-YMPKEKTRVKIHHPDGEKTWKVVFVVKERGQIFSGGWKRLCKEYPVVFGDTCK 292
Query: 310 FELIKSNDVTL 320
F LI ++ L
Sbjct: 293 FTLITPLELLL 303
>TAIR|locus:2158108 [details] [associations]
symbol:AT5G66980 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IDA]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB026640 HSSP:Q9FX77 IPI:IPI00522166
RefSeq:NP_201499.1 UniGene:At.55721 ProteinModelPortal:Q9FGD2
SMR:Q9FGD2 EnsemblPlants:AT5G66980.1 GeneID:836832
KEGG:ath:AT5G66980 TAIR:At5g66980 eggNOG:NOG256774
HOGENOM:HOG000155376 InParanoid:Q9FGD2 OMA:KFSHESW PhylomeDB:Q9FGD2
ProtClustDB:CLSN2916529 Genevestigator:Q9FGD2 Uniprot:Q9FGD2
Length = 334
Score = 123 (48.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 31/94 (32%), Positives = 45/94 (47%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQ----LWF 63
F+K+ +P +L IP F+ L A GR+W VE K + + ++F
Sbjct: 10 FFKVFLPEF-GSHELVIPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFF 68
Query: 64 DIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIF 97
GW F S+ G FL+F Y G+S F+V IF
Sbjct: 69 TKGWQSFANDQSLEFGDFLVFSYDGDSRFSVTIF 102
Score = 111 (44.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 215 EKKRTVHAAEMYKSSNPLF-RVILRPSYVYRTLLLHVPTSFARKYLNGIK--GYITIIDS 271
EKK +YK +P F R I R S L +P +F R NGI+ I + D
Sbjct: 203 EKKHNGFEESVYKPKHPHFVRNITRGSLQK----LELPLTFLRS--NGIELEEDIELCDE 256
Query: 272 NGKQWPVRCIFKNGGAKFS-KGWPEFVWENNLDESDVCVFELIKSNDVTLKATIFRVLED 330
+GK+WP++ + + G KFS + W F + + ++ C+FE I ++ + R++
Sbjct: 257 SGKKWPLKILNHDRGFKFSHESWLCFCKSHEMILTNKCLFEFIVPSNGRCSEILVRIVSG 316
Query: 331 ARP 333
P
Sbjct: 317 RLP 319
>TAIR|locus:2119166 [details] [associations]
symbol:AT4G33280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005773 "vacuole" evidence=IDA] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 GO:GO:0005634 GO:GO:0005773
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AJ441117 IPI:IPI00520178
PIR:T05979 RefSeq:NP_195054.2 UniGene:At.31598
ProteinModelPortal:Q8RYD1 SMR:Q8RYD1 EnsemblPlants:AT4G33280.1
GeneID:829464 KEGG:ath:AT4G33280 TAIR:At4g33280 eggNOG:NOG318846
HOGENOM:HOG000154089 InParanoid:Q8RYD1 OMA:EMISAGS PhylomeDB:Q8RYD1
ProtClustDB:CLSN2918854 Genevestigator:Q8RYD1 Uniprot:Q8RYD1
Length = 337
Score = 117 (46.2 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCN-KQLWFDIG 66
F +L++P +L IP KF +L I PSG + V +++ + K + F G
Sbjct: 25 FTQLLLPGF--HNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFG 82
Query: 67 WHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFD---LAISEIEY--PSLEEPSDSKQCHVP 121
W +F++ S+ L+FK+ G S F V +FD L Y +K H
Sbjct: 83 WDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTG 142
Query: 122 IEKDKEKNSSL 132
E+++ NS +
Sbjct: 143 YEQEEHINSDI 153
Score = 111 (44.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 37/112 (33%), Positives = 52/112 (46%)
Query: 233 FRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRC-IF-KNGGAKFS 290
F V ++ S+V L +P + K + I ++ + +W ++ IF G S
Sbjct: 223 FLVFMKRSHVVSKCFLTIPYKWCVKNML-ITRQEVVMQVDQTKWEMKFNIFGARGSGGIS 281
Query: 291 KGWPEFVWENNLDESDVCVFELIKSND--VTLKATIFRVLEDAR-----PVY 335
GW +FV +NNL E DVCVFE S + L IFR E R PVY
Sbjct: 282 TGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFRGEETERTNNVDPVY 333
>TAIR|locus:2086082 [details] [associations]
symbol:REM22 "REPRODUCTIVE MERISTEM 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048440 "carpel development"
evidence=RCA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB026636
HOGENOM:HOG000131629 ProtClustDB:CLSN2681146 EMBL:AB493618
IPI:IPI00527476 RefSeq:NP_188326.1 UniGene:At.38804
ProteinModelPortal:Q9LSP6 DNASU:820957 EnsemblPlants:AT3G17010.1
GeneID:820957 KEGG:ath:AT3G17010 TAIR:At3g17010 eggNOG:NOG255942
InParanoid:Q9LSP6 OMA:REIRTIF PhylomeDB:Q9LSP6
Genevestigator:Q9LSP6 Uniprot:Q9LSP6
Length = 302
Score = 122 (48.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 39/160 (24%), Positives = 69/160 (43%)
Query: 166 TSGVKIE-----YLHIPKDEHNQETAFHCPQDKGIQFKNTSDEVGLRWRAVTTEEKKRTV 220
+SG+K E + + K+E + E+ + ++ K T D + + + KK++
Sbjct: 132 SSGIKKEEGENSLIDVKKEEESDESPGRA--EFLVRKKKTEDSKSSKKKMTRNKVKKKSK 189
Query: 221 HAAEMYKSSNPLFRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRC 280
++ P F++ +R SY+ L +P F ++ TI NG W V C
Sbjct: 190 SKSKQVLDGVPEFKITIRKSYLK---FLAIPKHFVDDHIPNKSKIFTIRHPNGGSWKVLC 246
Query: 281 IFKNGGAKFSKGWPEFVWENNLDESDVCVFELIKSNDVTL 320
+ + FS G+ + E L D C F+LIK + L
Sbjct: 247 LVREIRTIFSGGYSKLAREFPLMVGDKCTFKLIKPFEFVL 286
Score = 92 (37.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 1 EGKRSCIFYKLIVPSILQDKKLR-IPDKFVQKFGDELSSIAKFTIPS--GRMWFVELKKC 57
E ++ F+K+ + L +R +P F+ K ++ S K I + G+ W VE+ K
Sbjct: 14 EERQMLSFFKIFQRADLSSDCMRALPYSFISKVSEKDFSY-KMVIRAQWGKTWDVEVSKN 72
Query: 58 NKQLWFDI-GWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYP 107
+ + GW F+ ++ F+ F ++GN F+V I++ E+ P
Sbjct: 73 PTYYYIETRGWDLFVSDNALGQNEFITFTHRGNMVFHVNIYEQNGLEMRKP 123
>TAIR|locus:2172319 [details] [associations]
symbol:AT5G18090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB012246 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:BT004099 EMBL:BT005553 EMBL:AY087853
IPI:IPI00536965 RefSeq:NP_197310.1 UniGene:At.31471
ProteinModelPortal:Q9FK61 SMR:Q9FK61 EnsemblPlants:AT5G18090.1
GeneID:831636 KEGG:ath:AT5G18090 TAIR:At5g18090 eggNOG:NOG305722
InParanoid:Q9FK61 OMA:FCAGWIR PhylomeDB:Q9FK61
Genevestigator:Q9FK61 Uniprot:Q9FK61
Length = 301
Score = 109 (43.4 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 27/94 (28%), Positives = 43/94 (45%)
Query: 231 PLFRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQ-WPVRCIFKNGGAKF 289
P F + ++ SY+ + L +P F ++ I D GK+ W V F N +F
Sbjct: 210 PEFTLTIKKSYL---IFLGIPKMFEELHMPTEATMFKIHDPEGKRSWDVMYKFSNNQTRF 266
Query: 290 SKGWPEFVWENNLDESDVCVFELIKSNDVTLKAT 323
GW E L+ DVC F LIK ++ ++ +
Sbjct: 267 CAGWIRLAKELGLEIGDVCTFTLIKPTEMLVRVS 300
Score = 101 (40.6 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 28/104 (26%), Positives = 52/104 (50%)
Query: 8 FYKLIVPSILQDKKLR-IPDKFVQKFGDE-LSSIAKFTIPSGRMWFVELKKCNKQLWF-- 63
F+K++ + L + +R IP F++ +E LS+ + G W +++ + N +F
Sbjct: 18 FFKILRSADLSSEIMRGIPLNFIKSISEEELSAKMLLKVSWGSSWPIKICR-NPSFYFME 76
Query: 64 DIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYP 107
GW +F+ + + FL F +QGN F V I+ + E+ P
Sbjct: 77 KKGWDQFLSDNGLGNDEFLTFTHQGNMCFTVDIYQIDGKELLTP 120
>TAIR|locus:2052991 [details] [associations]
symbol:AT2G16210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007134 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:AY247810 EMBL:AY247811 EMBL:AY924741
IPI:IPI00517726 IPI:IPI00548228 PIR:H84537 RefSeq:NP_179217.2
RefSeq:NP_973471.1 UniGene:At.40304 ProteinModelPortal:Q5BPT7
SMR:Q5BPT7 EnsemblPlants:AT2G16210.1 GeneID:816118
KEGG:ath:AT2G16210 TAIR:At2g16210 eggNOG:NOG329060
InParanoid:Q5BPT7 OMA:VKEYPLA PhylomeDB:Q5BPT7
Genevestigator:Q5BPT7 Uniprot:Q5BPT7
Length = 291
Score = 113 (44.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 32/130 (24%), Positives = 60/130 (46%)
Query: 1 EGKRSCIFYKLIVP-SILQDKKLRIPDKFVQKFGD-ELSSIAKFTIPSGRMWFVELKKCN 58
E +++ F+K++ ++ + K +P F + F D ELS K G W V + K N
Sbjct: 12 EERKNESFFKVVQSINVSSENKRALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISK-N 70
Query: 59 KQLWF--DIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSK 116
+ +F GW +F+ ++ + L F ++G +F V IF L E+ P +
Sbjct: 71 PRFYFMEKSGWEKFVRDNALGNSELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFAS 130
Query: 117 QCHVPIEKDK 126
+ E+++
Sbjct: 131 SSRIKTEQEE 140
Score = 91 (37.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 38/138 (27%), Positives = 57/138 (41%)
Query: 191 QDKGIQFKNTSDEVGLRWRAVTTEEKKRT---VHAAEMY----KSSNPLFRVILRPSYVY 243
Q + K +G R A ++ KRT V A Y S+ F ++ + Y+
Sbjct: 155 QTTAAESKGRKLNLGKR-AAKESQSSKRTEKVVRARSDYAGASSSTAAAFTILFKQGYL- 212
Query: 244 RTLLLHVPTSFARKYLNGIKGYITIIDSNGKQ-WPVRCIFKNGGAKFSKGWPEFVWENNL 302
+ L +P S ++ + K I NGK+ W V + + G FS GW V E L
Sbjct: 213 --VFLRIPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGA--FSGGWRRVVKEYPL 268
Query: 303 DESDVCVFELIKSNDVTL 320
D C F IK ++ L
Sbjct: 269 AVGDTCKFTFIKPKELLL 286
>TAIR|locus:2164180 [details] [associations]
symbol:AT5G60130 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB019231 HSSP:Q9FX77 HOGENOM:HOG000097080
EMBL:DQ056730 IPI:IPI00518198 IPI:IPI00992289 IPI:IPI01019840
RefSeq:NP_001190577.1 RefSeq:NP_200821.1 UniGene:At.55637
ProteinModelPortal:Q9LVG1 SMR:Q9LVG1 GeneID:836135
KEGG:ath:AT5G60130 TAIR:At5g60130 InParanoid:Q9LVG1
PhylomeDB:Q9LVG1 ArrayExpress:Q9LVG1 Genevestigator:Q9LVG1
Uniprot:Q9LVG1
Length = 326
Score = 152 (58.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 70/332 (21%), Positives = 134/332 (40%)
Query: 5 SCI--FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKC----- 57
+C+ F+K+ +P D + +P F + L SG +W +ELKKC
Sbjct: 9 NCVPKFFKVYLPDESGDDMV-LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDD 67
Query: 58 NKQLWFDIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSKQ 117
++ GW ++ + G FL F++ G+S F+ I++ + SD +
Sbjct: 68 TEKFVMVNGWKRIVKDEDLKGGDFLEFEFDGSSCFHFCIYE---HRTMCKKIRRSSDQSE 124
Query: 118 CHVPIEKDKEKNSSLRILPPLRAPCPDPFSPATKVLDEGVCYKCNKDSTSGVKIEYLHIP 177
+ +E D ++ + D S D+ Y C +D+ S + +
Sbjct: 125 -EIKVESDSDEQNQAS---------DDVLSLDED--DDDSDYNCGEDNDSDDYADEAAVE 172
Query: 178 KDEHN--QETAFHCPQDKGIQFKNTSDEVGLRWRAVTTEEKKRTVHAAEMYKSSNPLFRV 235
KD+++ E + D ++ + + R A ++ + + NP F +
Sbjct: 173 KDDNDADDEDVDNVADDVPVEDDDYVEAFDSRDHAKADDDDEDERQYLD--DRENPSFTL 230
Query: 236 ILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPV---RCIFKNGGAKFSKG 292
IL P ++ LL +P + Y IT++D K++ + + G+ F KG
Sbjct: 231 ILNPKK--KSQLL-IPARVIKDYDLHFPESITLVDPLVKKFGTLEKQIKIQTNGSVFVKG 287
Query: 293 WPEFVWENNLDESDVCVFELIKSNDVTLKATI 324
+ + N + +D +FE+ K+ D L TI
Sbjct: 288 FGSIIRRNKVKTTDKMIFEIKKTGDNNLVQTI 319
>TAIR|locus:2063434 [details] [associations]
symbol:AT2G35310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC004667 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:BT002032 EMBL:BT020353 EMBL:BT021085
IPI:IPI00525483 PIR:A84767 RefSeq:NP_181074.2 UniGene:At.37682
ProteinModelPortal:Q5PNU4 PRIDE:Q5PNU4 EnsemblPlants:AT2G35310.1
GeneID:818098 KEGG:ath:AT2G35310 TAIR:At2g35310 eggNOG:NOG312915
InParanoid:Q5PNU4 OMA:KARWGSS PhylomeDB:Q5PNU4
Genevestigator:Q5PNU4 Uniprot:Q5PNU4
Length = 288
Score = 117 (46.2 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 33/101 (32%), Positives = 52/101 (51%)
Query: 1 EGKRSCIFYKLIVPSILQDKKLR-IPDKFVQKFGD-ELSSIAKFTIPSGRMWFVELKKCN 58
E KR F+K++ + + +R +P FV+ F + ELS K G W VE+ K N
Sbjct: 13 ERKRES-FFKVLQRVDISSENMRALPYDFVRSFSNNELSRKMKIKARWGSSWEVEICK-N 70
Query: 59 KQLWF--DIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIF 97
+ +F GW +F+ ++ + FL F ++GN F V IF
Sbjct: 71 PRFYFMEKSGWEKFVSDNALGASEFLTFTHKGNMRFTVNIF 111
Score = 71 (30.1 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 24/94 (25%), Positives = 39/94 (41%)
Query: 228 SSNPLFRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQ-WPVRCIFKNGG 286
SS F + ++ SY+ + + P S ++ + I N K+ W V +
Sbjct: 193 SSVAEFSMFIKKSYL---IYMWFPKSVQSIHMPKQRTIFKIHHPNMKKSWNVVYVVSGTK 249
Query: 287 AKFSKGWPEFVWENNLDESDVCVFELIKSNDVTL 320
+ FS GW E L D C F IK +++ L
Sbjct: 250 SSFSAGWKGLAQEYPLAVGDTCKFSFIKQHELIL 283
>TAIR|locus:2164135 [details] [associations]
symbol:AT5G60140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB026632 EMBL:AB019231
HOGENOM:HOG000097080 EMBL:AB493802 IPI:IPI00524557
RefSeq:NP_200822.1 UniGene:At.29182 ProteinModelPortal:Q9FHB0
SMR:Q9FHB0 EnsemblPlants:AT5G60140.1 GeneID:836136
KEGG:ath:AT5G60140 TAIR:At5g60140 eggNOG:NOG298379
InParanoid:Q9FHB0 OMA:ICELKRT PhylomeDB:Q9FHB0
ProtClustDB:CLSN2916300 Genevestigator:Q9FHB0 Uniprot:Q9FHB0
Length = 328
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 79/325 (24%), Positives = 126/325 (38%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDI-- 65
F+K +PS D L +P F L SG +W + KKC ++ +
Sbjct: 15 FFKPYLPSESGDD-LVLPISFNSCLPKSLPKTVTVRSISGNIWKLGFKKCGGEVERFVMV 73
Query: 66 -GWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSKQCHVPIEK 124
GW + + +++ G L F++ G+ FN IFD E L+ S+ + + +
Sbjct: 74 SGWKKIVRDENLNGGDLLSFEFDGSHFFNFSIFD---HETTCKRLKRSSEQSKDIIKVGS 130
Query: 125 DKEKNSSLRI-LPPLRAPCPDPFSPATKVLDEGVCYKCNK-DSTSGVKIEYLHIPKDEHN 182
D E+ S + L + D V D+ V + + V+ E + KD
Sbjct: 131 DCEEESQASDDVIVLNSDDSDDSDNDYSVEDDNVAEDDDGLEDEVDVEAEDGYDAKDSDG 190
Query: 183 QETAFHCPQDKGIQFKNTSDEVGLRWRAVTTEEKKRTVHAAEMYKSSNPLFRVILRPSYV 242
E + G K D+ GL +E + + NP F + L P
Sbjct: 191 LEDEDDDEAEDGYDAK---DDDGLEDEDDLEDEDDERRYLDD---HENPYFTMTLNPK-- 242
Query: 243 YRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRCIFKNGGAKFSKGWPEFVWENNL 302
+ LH+P R Y IT++D G I KNG F KG+ F+ N +
Sbjct: 243 -KKSQLHIPAHVIRDYDLTFPERITVVDEMGALEKAIKIQKNG-CIFVKGFGSFIRRNKM 300
Query: 303 DESDVCVFELIKS--NDV-TLKATI 324
+D + EL ++ N V T+K I
Sbjct: 301 KMTDKMICELKRTGGNLVHTIKVKI 325
>TAIR|locus:2124824 [details] [associations]
symbol:AT4G31680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 EMBL:AJ515262 IPI:IPI00530013 PIR:T05102
RefSeq:NP_194896.2 UniGene:At.31724 ProteinModelPortal:Q8H2D1
SMR:Q8H2D1 PaxDb:Q8H2D1 PRIDE:Q8H2D1 EnsemblPlants:AT4G31680.1
GeneID:829296 KEGG:ath:AT4G31680 TAIR:At4g31680 eggNOG:NOG262844
InParanoid:Q8H2D1 OMA:QHLPVSF PhylomeDB:Q8H2D1
ProtClustDB:CLSN2685879 Genevestigator:Q8H2D1 Uniprot:Q8H2D1
Length = 462
Score = 111 (44.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKF--GDELSSIAKFTIP-SGRMWFVELKKCNKQLWFD 64
F+K ++P + L IP KF + G K S R W E+K +L
Sbjct: 14 FFKPLLPGF--QRNLNIPVKFFSEHIEGKHEGETVKLRADASKRTW--EVKMDGNRL--T 67
Query: 65 IGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYP---SLEEPSDSKQCHVP 121
GW EF+E + F++F+++G+ F+V + EI+YP S EE +S + +
Sbjct: 68 EGWKEFVEAHDLRIRDFVVFRHEGDMVFHVTALGPSCCEIQYPQSISHEEGEESGEVEIS 127
Query: 122 IEKDKEKN 129
E++ E+N
Sbjct: 128 -EREVEEN 134
Score = 69 (29.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 249 HVPTSFARKYLNGI--KGYITIIDSNGKQWPVRCIFKN-GGAKFSKG--WPEFVWENNLD 303
H+P SF + NG+ G I ++D + +W ++ N GG G W F N +
Sbjct: 265 HLPVSFTKG--NGLIHPGEIILVDKDRVEWSMKLQVDNRGGMHIFGGNDWKSFCAANEVG 322
Query: 304 ESDVCVFELIK 314
+ ELI+
Sbjct: 323 AGESLTLELIR 333
>TAIR|locus:2124839 [details] [associations]
symbol:AT4G31690 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0009941 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 eggNOG:NOG262844 ProtClustDB:CLSN2685879 EMBL:AJ441294
IPI:IPI00526797 PIR:T05101 RefSeq:NP_194897.1 UniGene:At.31723
ProteinModelPortal:O81778 SMR:O81778 EnsemblPlants:AT4G31690.1
GeneID:829297 KEGG:ath:AT4G31690 TAIR:At4g31690 InParanoid:O81778
PhylomeDB:O81778 Genevestigator:O81778 Uniprot:O81778
Length = 461
Score = 106 (42.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 35/128 (27%), Positives = 63/128 (49%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGD---ELSSIAKFTIPSGRMWFVELKKCNKQLWFD 64
F++ ++P L+IP + + + E ++ T S R W E+K +L
Sbjct: 14 FFQPLLPGF--QSNLKIPVNYFSEHIEGKHEGKTVTLRTDASERTW--EVKMEGHRL--T 67
Query: 65 IGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSL---EEPSDSKQCHVP 121
GW EF+E + G F++F+++G+ F+V + EI+YP EE +S + +
Sbjct: 68 EGWKEFVEAHDLRIGDFVVFRHEGDMVFHVTALGPSCCEIQYPQSSRHEEGEESGENEIS 127
Query: 122 IEKDKEKN 129
EK+ E+N
Sbjct: 128 -EKEGEEN 134
Score = 71 (30.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 27/115 (23%), Positives = 47/115 (40%)
Query: 208 WRAVTTEEKKRTVHAAE---MYKSSNPLFRVILRPSYVYRTLLLHVPTSFARKYLNGI-- 262
W TE K + + K+ P+F++ R H+P SF + +NG+
Sbjct: 210 WTTFCTENKLDVGDSCTFKLLQKAKTPVFQLCSRTK--------HLPLSFTK--VNGLIN 259
Query: 263 KGYITIIDSNGKQWPVRCIFKNGGAKFSKG---WPEFVWENNLDESDVCVFELIK 314
G I ++D + +W + + GA + G W F N + + ELI+
Sbjct: 260 PGKIILVDKDRAEWSMMLKVDSRGAVYIIGGNDWKSFCAANEVGAGESLALELIQ 314
>TAIR|locus:2124889 [details] [associations]
symbol:AT4G31650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
eggNOG:NOG265345 IPI:IPI00516460 PIR:T05105 RefSeq:NP_194893.1
UniGene:At.54568 ProteinModelPortal:O81782 SMR:O81782 PRIDE:O81782
EnsemblPlants:AT4G31650.1 GeneID:829293 KEGG:ath:AT4G31650
TAIR:At4g31650 InParanoid:O81782 OMA:KSHINIP PhylomeDB:O81782
Genevestigator:O81782 Uniprot:O81782
Length = 493
Score = 97 (39.2 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 250 VPTSFARKY-LNGIKGYITIIDSNGKQWPVRCI-FKNGGAKFSKGWPEFVWENNLDESDV 307
VP FA++Y N + I +++ GK W I +K+G + GW E+ L+ D
Sbjct: 148 VPRDFAKRYGFNIGRHEIVLMNEEGKPWESEVISYKSGKVIVAGGWKSLCTESKLEVGDS 207
Query: 308 CVFELIKSNDVTLKATIFRV 327
C F+L+ + K +FR+
Sbjct: 208 CTFKLLHN----AKMPVFRL 223
Score = 81 (33.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKF--GDELSSIAKFTIPSG-RMWFVELKKCNKQLWFD 64
F++ ++P + IP KF K+ G K S R W V+++ D
Sbjct: 14 FFQPLLPGF--KSHINIPVKFFSKYIKGKHEGKTVKLRSDSSKRTWKVKIEG---HTLTD 68
Query: 65 IGWHEFIEHCSIHSGYFLIFKYQGNSNFNV 94
GW EF+E + F+IFK++G+ F+V
Sbjct: 69 -GWKEFVEAHDLRISDFVIFKHKGDMFFDV 97
Score = 79 (32.9 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 26/88 (29%), Positives = 39/88 (44%)
Query: 249 HVPTSFARKYLNG---IKGY--ITIIDSNGKQWPVRCIFKNGGAKF-SKG-WPEFVWENN 301
HV S R ++ IKG I +++ + W + F++ F S+G W F EN
Sbjct: 293 HVAKSLPRNFVRSDGLIKGSNKIVLMNEGARTWTLILKFRDSRRSFYSRGGWRSFCRENG 352
Query: 302 LDESDVCVFELIKSNDVTLKATIFRVLE 329
L D F+L SN T +F + E
Sbjct: 353 LKPGDSVTFKLESSNTKT-PLLLFSIAE 379
>TAIR|locus:2083921 [details] [associations]
symbol:AT3G53310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AL132966 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HSSP:Q9FX77 EMBL:BT025724
EMBL:AB493647 EMBL:AY087586 IPI:IPI00519323 PIR:T45871
RefSeq:NP_566984.1 UniGene:At.47486 ProteinModelPortal:Q8LAV5
SMR:Q8LAV5 PRIDE:Q8LAV5 EnsemblPlants:AT3G53310.1 GeneID:824499
KEGG:ath:AT3G53310 TAIR:At3g53310 eggNOG:NOG240874
HOGENOM:HOG000097078 InParanoid:Q8LAV5 OMA:VECELLH PhylomeDB:Q8LAV5
ProtClustDB:CLSN2689141 Genevestigator:Q8LAV5 Uniprot:Q8LAV5
Length = 286
Score = 129 (50.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 36/122 (29%), Positives = 55/122 (45%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGW 67
F+K+ + + L IP F+ D L K G++W V LKK + + GW
Sbjct: 11 FFKVFLVESASES-LMIPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGW 69
Query: 68 HEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDL-AISEIEYPSLEEP-SDSKQCHVPIEKD 125
+F E + +G F+ F Y G+ F V +FD E+ P SDS V +E +
Sbjct: 70 PKFAEEHELKNGEFMTFVYDGHRTFEVSVFDRWGSKEVRAEIQAIPLSDSDSDSV-VEDE 128
Query: 126 KE 127
K+
Sbjct: 129 KD 130
>TAIR|locus:2017953 [details] [associations]
symbol:AT1G16640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC011808 EMBL:BT012511 EMBL:BT014811
IPI:IPI00519755 PIR:E86301 RefSeq:NP_173109.1 UniGene:At.41877
PDB:1YEL PDBsum:1YEL ProteinModelPortal:Q9FX77 SMR:Q9FX77
DNASU:838233 EnsemblPlants:AT1G16640.1 GeneID:838233
KEGG:ath:AT1G16640 TAIR:At1g16640 eggNOG:NOG262155
HOGENOM:HOG000097068 InParanoid:Q9FX77 OMA:MADTGEV PhylomeDB:Q9FX77
ProtClustDB:CLSN2914317 EvolutionaryTrace:Q9FX77
Genevestigator:Q9FX77 GermOnline:AT1G16640 Uniprot:Q9FX77
Length = 134
Score = 104 (41.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 20 KKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGWHEFIEHCSIHSG 79
K L IP F + F SGR W V +KK ++++ +GW F++ ++ G
Sbjct: 20 KSLEIPLGFNEYFPAPFPITVDLLDYSGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDG 79
Query: 80 YFLIFKYQGNSNFNVYIF 97
+L F Y + F V I+
Sbjct: 80 KYLQFIYDRDRTFYVIIY 97
>TAIR|locus:2124864 [details] [associations]
symbol:AT4G31630 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
IPI:IPI00516528 PIR:T05107 RefSeq:NP_194891.1 UniGene:At.54567
ProteinModelPortal:Q9SB79 SMR:Q9SB79 EnsemblPlants:AT4G31630.1
GeneID:829291 KEGG:ath:AT4G31630 TAIR:At4g31630 eggNOG:NOG301988
InParanoid:Q9SB79 PhylomeDB:Q9SB79 Genevestigator:Q9SB79
Uniprot:Q9SB79
Length = 512
Score = 93 (37.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 189 CPQDKGIQFKNTSDEVGLRWRAVTTEEKKRTVHAAEMYK-SSNPLFRVILRPSYVYRTLL 247
CP I N+S R + ++ + + +E + N + L+P YV+R+
Sbjct: 263 CPNASSIPEGNSSKARKKRNVSEIEGDEIESENCSETIPLNQNKILTFDLKP-YVFRSCQ 321
Query: 248 LHVPTSFARKYLNGI--KGYITIIDSNGKQWPVRCIFKNGGAKF-SKGWPEFVWENNLDE 304
+P SFAR+ NGI G +T+++ +G +W + G +F ++G +F N +
Sbjct: 322 FFLPASFARE--NGIVEAGEVTVLNKDGIEWKSHLVNIKGRDQFYNRGCQDFFVANGVKN 379
Query: 305 -SDVCVFELIK 314
D E+I+
Sbjct: 380 VGDPFTLEVIR 390
Score = 75 (31.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 29/108 (26%), Positives = 46/108 (42%)
Query: 24 IPDKFV-QKFGDELSSI-AKFTIP-SGRMWFVELKKCNKQLWFDIGWHEF-IEHCSIHSG 79
IP +F+ F ++ S K T S R W V+L F GW +F + H S+
Sbjct: 28 IPTEFIWNHFNGKIQSTNMKLTSDASDRNWDVKLDGAR----FAGGWKDFSVSH-SVRDD 82
Query: 80 YFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSKQCHVPIEKDKE 127
L F++ G F+V F + S+I+ S D + D++
Sbjct: 83 DLLSFRHDGGMVFHVSPFGRSFSQIQLISSSTSDDDDDERTVFDDDED 130
>TAIR|locus:2047241 [details] [associations]
symbol:AT2G24700 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007266 EMBL:BX819051 IPI:IPI00529810
PIR:H84639 RefSeq:NP_180046.2 UniGene:At.50095
ProteinModelPortal:P0DH85 SMR:P0DH85 PRIDE:P0DH85 GeneID:817006
KEGG:ath:AT2G24700 TAIR:At2g24700 HOGENOM:HOG000154088 OMA:RSDASEM
PhylomeDB:P0DH85 Uniprot:P0DH85
Length = 555
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 248 LHVPTSFARKYLNGI--KGYITIIDSNGKQWPV---RCIFKNGGAKFSKGWPEFVWENNL 302
L++P FA NG+ K I +++ G+ W + R + G +GW F N
Sbjct: 165 LYIPKEFALS--NGLMNKYQIVLMNEEGESWKIDLRREAYNYGRFYMRRGWRSFCIANGK 222
Query: 303 DESDVCVFELIKSNDVTLKATIFRVLED 330
DV F+L+K+ + + +ED
Sbjct: 223 KPGDVFAFKLVKNEETPMIQLFPMTIED 250
Score = 83 (34.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 33/128 (25%), Positives = 57/128 (44%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKF--GDELSSIAKFTIPSGRM-WFVELKKCNKQLWFD 64
F++ ++P L IP F K+ G + A+ + M W V++ ++L
Sbjct: 14 FFQPLLPGFTNH--LDIPVAFFLKYLVGTNVGKTAELRSDASEMTWKVKID--GRRL--S 67
Query: 65 IGWHEF-IEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEY--PSLEEPSDSKQCHVP 121
GW +F I H + G ++F+ +G F+V + EI+Y +LEE K C
Sbjct: 68 NGWEDFTIAH-DLRVGDIVVFRQEGELVFHVTALGPSCCEIQYGEDTLEEDKIEKLCGTE 126
Query: 122 IEKDKEKN 129
K+K+
Sbjct: 127 NVSSKKKS 134
>TAIR|locus:2161533 [details] [associations]
symbol:VDD "VERDANDI" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009553 GO:GO:0009567 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:AB015473 UniGene:At.19968
UniGene:At.71230 EMBL:AK227035 IPI:IPI00525697 RefSeq:NP_197301.1
ProteinModelPortal:Q9FJG2 SMR:Q9FJG2 EnsemblPlants:AT5G18000.1
GeneID:831667 KEGG:ath:AT5G18000 TAIR:At5g18000 eggNOG:NOG257290
InParanoid:Q9FJG2 OMA:FTHEANM PhylomeDB:Q9FJG2
Genevestigator:Q9FJG2 Uniprot:Q9FJG2
Length = 307
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 8 FYKLIVPSILQDKKLR-IPDKFVQKFGDELSSIAK-FTIPSGRMWFVELKKC-NKQLWFD 64
F+K++ + +R IP ++ D+ SS +P GR W V++ K N D
Sbjct: 20 FFKILRREDHSTEMMRMIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYMED 79
Query: 65 IGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDS----KQCHV 120
GW++F+ + +L F ++ N FNV IF+ +E+ P S S ++
Sbjct: 80 RGWNQFVNDNGLGENEYLTFTHEANMCFNVTIFEADGTEMLRPRKTITSSSGRNKREERK 139
Query: 121 PIEKDKEKNSSLRILPPLRAPC 142
I KD +K + PC
Sbjct: 140 SIYKDVKKEEEIESWSESSHPC 161
>TAIR|locus:2124879 [details] [associations]
symbol:AT4G31640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 EMBL:AJ441074 EMBL:AY142531 EMBL:AB493714
IPI:IPI00528633 PIR:T05106 RefSeq:NP_194892.1 UniGene:At.31730
ProteinModelPortal:Q9SB80 SMR:Q9SB80 EnsemblPlants:AT4G31640.1
GeneID:829292 KEGG:ath:AT4G31640 TAIR:At4g31640 eggNOG:NOG265345
InParanoid:Q9SB80 OMA:LQLGDLC PhylomeDB:Q9SB80
Genevestigator:Q9SB80 Uniprot:Q9SB80
Length = 352
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 40/153 (26%), Positives = 73/153 (47%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGD---ELSSIAKFTIPSGRMWFVELKKCNKQLWFD 64
F++ I+P ++IP KF K + E +++ + PS R W V+++ +K
Sbjct: 14 FFQPILPGF--KSHIKIPVKFFSKHIEGKHEGNTVYLRSYPSRRTWKVKMEG-HK---LT 67
Query: 65 IGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLEEPSDSKQCHVPIEK 124
GW EF+E + G F++FK++G+ F+V + E++Y PS S + ++
Sbjct: 68 EGWKEFVEAHDLRVGDFVVFKHKGDMLFHVTAIGPSCCEVQYA----PSRSHDRNEESDE 123
Query: 125 DKEKNSSLRILPPLRAPCPDPFSPATKVLDEGV 157
E + + +I+ PD FSP + V
Sbjct: 124 IGESSRNEKIIEENVKTEPDQFSPDLTCFSQSV 156
>TAIR|locus:2126016 [details] [associations]
symbol:MEE45 "maternal effect embryo arrest 45"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0009793 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AF013293 EMBL:AF195115 EMBL:AL161471
HOGENOM:HOG000154088 IPI:IPI00542107 PIR:T01545 RefSeq:NP_567162.2
UniGene:At.54056 ProteinModelPortal:O23076 SMR:O23076 PaxDb:O23076
PRIDE:O23076 EnsemblPlants:AT4G00260.1 GeneID:828225
KEGG:ath:AT4G00260 TAIR:At4g00260 InParanoid:O23076 OMA:AHITRSS
PhylomeDB:O23076 ProtClustDB:CLSN2680937 Genevestigator:O23076
Uniprot:O23076
Length = 528
Score = 93 (37.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 36/125 (28%), Positives = 50/125 (40%)
Query: 216 KKRTVHAAEMYKSSNPLFRVILRPSYV-YRTLLLHVPTSFARKYLNGIK---GYITIIDS 271
KK AE F + PS + Y TL L P F R+ NG+ G + +I+
Sbjct: 263 KKNVTREAESSSQDPSCFVANVSPSSLRYDTLYL--PKRFMRE--NGVDKRCGEMILINE 318
Query: 272 NGKQWPVRC-IFKNGGAKFSK-GWPEFVWENNLDESDVCVFELIKSNDVTLKATIFRVLE 329
GK W + + K+ G K GW F N L + +LIK + I E
Sbjct: 319 KGKSWTLDLKVKKSSGTSLIKRGWRSFCSANGLRAGSIITLKLIKKRATLVLRLIPNEPE 378
Query: 330 DARPV 334
+A V
Sbjct: 379 EANEV 383
Score = 69 (29.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKF--GDELSSIAKF-TIPSGRMWFVELKKCNKQLWFD 64
F+K ++P L IP F K+ G AK + S R W V K + Q D
Sbjct: 6 FFKPLLPGF--HASLTIPVAFFLKYIEGRYEQKTAKLRSDASKRTWEV---KIDGQRLTD 60
Query: 65 IGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPS 108
GW EF + G ++F+ + + F+V + + I+Y S
Sbjct: 61 -GWKEFAVSHDLRIGDIVVFRQESDLAFHVTLLGPSCCGIQYGS 103
>TAIR|locus:2082480 [details] [associations]
symbol:AT3G06220 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009887
"organ morphogenesis" evidence=RCA] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC018907 EMBL:DQ446640 EMBL:DQ653069
EMBL:AB493604 IPI:IPI00528156 RefSeq:NP_187273.2 UniGene:At.53201
ProteinModelPortal:Q1PES7 SMR:Q1PES7 EnsemblPlants:AT3G06220.1
GeneID:819796 KEGG:ath:AT3G06220 TAIR:At3g06220 eggNOG:NOG303845
HOGENOM:HOG000155280 InParanoid:Q1PES7 OMA:VTPMPVE PhylomeDB:Q1PES7
ProtClustDB:CLSN2920256 Genevestigator:Q1PES7 Uniprot:Q1PES7
Length = 174
Score = 107 (42.7 bits), Expect = 0.00054, P = 0.00054
Identities = 35/135 (25%), Positives = 56/135 (41%)
Query: 8 FYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGW 67
FY + + S + L IP + + L A T GR+W V + +Q++ GW
Sbjct: 10 FYTVFL-SCVSSNSLLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGW 68
Query: 68 HEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDL-AISEIE-YPSLEEPSDSKQCHVPIEKD 125
F+ + G FL F + G ++ V I+ + E +EE SD E D
Sbjct: 69 ENFVADNELKDGEFLTFVFDGYKSYEVSIYGRGSCKETRAVVHVEEISDES------ESD 122
Query: 126 KEKNSSLRILPPLRA 140
+ SL + P+ A
Sbjct: 123 NDSLGSLVDVTPMPA 137
>TAIR|locus:2165497 [details] [associations]
symbol:AT5G42700 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB007647 HOGENOM:HOG000239798 IPI:IPI00522209
RefSeq:NP_199084.2 UniGene:At.30157 ProteinModelPortal:Q9FMZ4
SMR:Q9FMZ4 EnsemblPlants:AT5G42700.1 GeneID:834279
KEGG:ath:AT5G42700 TAIR:At5g42700 eggNOG:NOG300571
InParanoid:Q9FMZ4 OMA:YETIYLA PhylomeDB:Q9FMZ4
ProtClustDB:CLSN2918338 Genevestigator:Q9FMZ4 Uniprot:Q9FMZ4
Length = 211
Score = 108 (43.1 bits), Expect = 0.00096, P = 0.00096
Identities = 38/138 (27%), Positives = 59/138 (42%)
Query: 195 IQFKNTSDEVGLRWRAVTTEE-KKRTVHAAEMYK----SSNPLFRVILRPSYVYRTLLLH 249
IQ + + L R +EE + + A ++ S P F + S+V L
Sbjct: 67 IQRRGVGKKRDLLNRVYVSEEIRDEAISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLG 126
Query: 250 VPTSFARKYLNGIKGYITIIDSNGKQWPVRCIFKNGGAKFSKGWPEFVWENNLDESDVCV 309
+P F + +L G IT+ID G+++ + + G S GW F +NL D V
Sbjct: 127 LPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNG--LSGGWMGFAVAHNLAYGDTLV 184
Query: 310 FELIKSNDVTLKATIFRV 327
FEL++ K I RV
Sbjct: 185 FELVRRT--AFKVYITRV 200
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.435 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 335 335 0.00092 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 614 (65 KB)
Total size of DFA: 262 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.21u 0.12s 29.33t Elapsed: 00:00:01
Total cpu time: 29.21u 0.12s 29.33t Elapsed: 00:00:01
Start: Thu May 9 18:36:06 2013 End: Thu May 9 18:36:07 2013