Query 041048
Match_columns 335
No_of_seqs 167 out of 898
Neff 7.8
Searched_HMMs 13730
Date Mon Mar 25 04:51:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041048.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041048hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yela1 b.142.1.2 (A:1-102) At 100.0 1.7E-28 1.2E-32 191.8 12.3 99 3-102 4-102 (102)
2 d1yela1 b.142.1.2 (A:1-102) At 99.9 4.5E-24 3.3E-28 166.4 12.0 98 227-328 3-100 (102)
3 d1wida_ b.142.1.2 (A:) DNA-bin 99.8 4E-20 2.9E-24 147.4 13.3 104 228-331 2-114 (117)
4 d1wida_ b.142.1.2 (A:) DNA-bin 99.6 6.3E-15 4.6E-19 116.8 12.7 97 5-101 4-112 (117)
5 d1na6a1 b.142.1.1 (A:4-178) Re 98.1 5E-06 3.6E-10 67.5 8.8 99 228-326 13-135 (175)
6 d1na6a1 b.142.1.1 (A:4-178) Re 97.5 9.8E-05 7.1E-09 59.7 6.6 82 6-87 16-120 (175)
7 d2d9ra1 b.129.2.1 (A:20-104) H 71.3 9.2 0.00067 26.2 7.5 78 233-313 5-83 (85)
8 d2cbpa_ b.6.1.1 (A:) Plantacya 50.4 5 0.00037 28.3 2.9 26 297-322 19-44 (96)
9 d1f56a_ b.6.1.1 (A:) Plantacya 49.9 4.9 0.00035 28.0 2.7 25 297-321 14-38 (91)
10 d1oa8a_ b.145.1.1 (A:) Ataxin- 47.6 7.1 0.00052 28.6 3.5 20 290-309 94-123 (128)
11 d1ws8a_ b.6.1.1 (A:) Mavicyani 44.4 9.7 0.00071 27.0 3.7 26 296-321 24-49 (104)
12 d2cbpa_ b.6.1.1 (A:) Plantacya 40.0 7.6 0.00056 27.3 2.4 20 71-90 19-38 (96)
13 d1f56a_ b.6.1.1 (A:) Plantacya 39.9 7.3 0.00053 27.0 2.3 20 71-90 14-33 (91)
14 d1jera_ b.6.1.1 (A:) Stellacya 35.4 8.2 0.0006 27.6 2.0 20 297-316 27-46 (110)
15 d1mvfd_ b.129.1.1 (D:) MazE {E 35.2 14 0.001 21.9 2.7 28 20-47 10-37 (44)
16 d1jala2 d.15.10.2 (A:279-363) 23.4 13 0.00094 25.4 1.1 16 72-87 69-84 (85)
17 d1yuaa2 g.41.3.3 (A:66-122) Pr 20.7 11 0.00078 23.8 0.2 31 42-72 11-48 (57)
No 1
>d1yela1 b.142.1.2 (A:1-102) At1g16640 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.95 E-value=1.7e-28 Score=191.80 Aligned_cols=99 Identities=25% Similarity=0.517 Sum_probs=94.2
Q ss_pred CccccEEEEcccCcccCceEecchHHHHhhCCCCCceEEEEcCCCCEEEEEEEEeCCeEEEcccHHHHHhHcCCCCCcEE
Q 041048 3 KRSCIFYKLIVPSILQDKKLRIPDKFVQKFGDELSSIAKFTIPSGRMWFVELKKCNKQLWFDIGWHEFIEHCSIHSGYFL 82 (335)
Q Consensus 3 ~~~~~Ffk~~~~~~~~~~~l~IP~~F~~~~~~~~~~~v~L~~~~g~~W~V~l~~~~~~~~~~~GW~~F~~~~~L~~Gd~l 82 (335)
-+.++|||+++|+... .+|.||..|+++|++..+.+|+|++++|+.|.|++.+.++.++|+.||++||++|+|++||+|
T Consensus 4 ~~~~~Ffkv~~~~~~~-~~L~IP~~F~~~~~~~~~~~i~L~d~~G~~W~v~~~~~~~~~~~~~GW~~Fv~~n~L~~GD~~ 82 (102)
T d1yela1 4 TGEVQFMKPFISEKSS-KSLEIPLGFNEYFPAPFPITVDLLDYSGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYL 82 (102)
T ss_dssp CCCEEEEEECCHHHHT-TCEECCHHHHTTCCCCCCSEEEEEETTSCEEEEEEEEETTEEEECTTHHHHHHHHTCCTTCEE
T ss_pred CCCCeEEEEEcCcccC-CCEECCHHHHHhCCCCCCCEEEEEcCCCCEEEEEEEEeCCeEEEccCHHHHHHHcCCCcCCEE
Confidence 3578999999998753 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcccceEEEEEEeCCcc
Q 041048 83 IFKYQGNSNFNVYIFDLAIS 102 (335)
Q Consensus 83 vF~~~g~~~F~V~if~~~~~ 102 (335)
+|+|+++++|.|.|||.++|
T Consensus 83 vF~~~~~~~f~V~If~~s~C 102 (102)
T d1yela1 83 QFIYDRDRTFYVIIYGHNMC 102 (102)
T ss_dssp EEEECSSSEEEEEEECSSCC
T ss_pred EEEEcCCcEEEEEEeCCCCC
Confidence 99999999999999999988
No 2
>d1yela1 b.142.1.2 (A:1-102) At1g16640 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.90 E-value=4.5e-24 Score=166.40 Aligned_cols=98 Identities=19% Similarity=0.349 Sum_probs=89.8
Q ss_pred CCCCCeEEEEccCcccCCCceeecCHHHHHhhcCCCCeeEEEEeCCCCeEEEEEEEeCCeeeeccChhHhhhhcCCCCCC
Q 041048 227 KSSNPLFRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRCIFKNGGAKFSKGWPEFVWENNLDESD 306 (335)
Q Consensus 227 ~~~~p~F~~~m~~s~v~~~~~L~iP~~F~~~~l~~~~~~i~L~~~~G~~W~v~~~~~~~~~~l~~GW~~F~~~n~L~~GD 306 (335)
.++.|+|.++|.+++... .|.||..|++.|.+...++|+|+|++|+.|+|++...++..+|+.||.+||++|+|++||
T Consensus 3 ~~~~~~Ffkv~~~~~~~~--~L~IP~~F~~~~~~~~~~~i~L~d~~G~~W~v~~~~~~~~~~~~~GW~~Fv~~n~L~~GD 80 (102)
T d1yela1 3 DTGEVQFMKPFISEKSSK--SLEIPLGFNEYFPAPFPITVDLLDYSGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGK 80 (102)
T ss_dssp CCCCEEEEEECCHHHHTT--CEECCHHHHTTCCCCCCSEEEEEETTSCEEEEEEEEETTEEEECTTHHHHHHHHTCCTTC
T ss_pred CCCCCeEEEEEcCcccCC--CEECCHHHHHhCCCCCCCEEEEEcCCCCEEEEEEEEeCCeEEEccCHHHHHHHcCCCcCC
Confidence 467899999999987643 699999999999999899999999999999999988888899999999999999999999
Q ss_pred EEEEEEecCCCcEEEEEEEeeC
Q 041048 307 VCVFELIKSNDVTLKATIFRVL 328 (335)
Q Consensus 307 ~cvFel~~~~~~~~~V~Ifr~~ 328 (335)
+|+|++.++. .|.|+||+..
T Consensus 81 ~~vF~~~~~~--~f~V~If~~s 100 (102)
T d1yela1 81 YLQFIYDRDR--TFYVIIYGHN 100 (102)
T ss_dssp EEEEEECSSS--EEEEEEECSS
T ss_pred EEEEEEcCCc--EEEEEEeCCC
Confidence 9999999877 9999999753
No 3
>d1wida_ b.142.1.2 (A:) DNA-binding protein RAV1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.82 E-value=4e-20 Score=147.44 Aligned_cols=104 Identities=28% Similarity=0.350 Sum_probs=89.1
Q ss_pred CCCCeEEEEccCcccCCCceeecCHHHHHhhcCCCC-------eeEEEEeCCCCeEEEEEEEe--CCeeeeccChhHhhh
Q 041048 228 SSNPLFRVILRPSYVYRTLLLHVPTSFARKYLNGIK-------GYITIIDSNGKQWPVRCIFK--NGGAKFSKGWPEFVW 298 (335)
Q Consensus 228 ~~~p~F~~~m~~s~v~~~~~L~iP~~F~~~~l~~~~-------~~i~L~~~~G~~W~v~~~~~--~~~~~l~~GW~~F~~ 298 (335)
+..+.|.++|++|++.+...|.||+.|+++|++... ..|+++|.+|+.|++++.+. +....|+.||.+||+
T Consensus 2 ~~~~iF~K~Lt~sDv~~~~rL~iP~~~~~~~lp~~~~~~~~~~~~~~~~d~~g~~W~~~~~~~~~~~~~~l~~GW~~Fv~ 81 (117)
T d1wida_ 2 SAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVK 81 (117)
T ss_dssp CCEEEEEEECCTTTTSSSCCEEECHHHHTTTSCCCSSCCSSCCEEEEEEETTTEEEEEEEEEETTTTEEEEESSHHHHHH
T ss_pred CCceEEEEEecchhcCCCCEEEECHHHHHHhCCccccccCCCcEEEEEEeCCCCEEEEEEEEECCCCceEEecCHHHHHH
Confidence 456899999999999876689999999999987643 35999999999999999764 346789999999999
Q ss_pred hcCCCCCCEEEEEEecCCCcEEEEEEEeeCCCC
Q 041048 299 ENNLDESDVCVFELIKSNDVTLKATIFRVLEDA 331 (335)
Q Consensus 299 ~n~L~~GD~cvFel~~~~~~~~~V~Ifr~~~~~ 331 (335)
+|+|++||+|+|+.....+..+.|.+.+..+..
T Consensus 82 ~~~Lk~GD~~~F~~~~~~~~~~~i~~r~~~~~~ 114 (117)
T d1wida_ 82 EKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSD 114 (117)
T ss_dssp HTTCCTTCEEEEEECCSSSCCEEEEEECCCSCS
T ss_pred HcCCCCCCEEEEEEEeCCCCEEEEEEEECCCCC
Confidence 999999999999998766667888888876654
No 4
>d1wida_ b.142.1.2 (A:) DNA-binding protein RAV1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.59 E-value=6.3e-15 Score=116.80 Aligned_cols=97 Identities=19% Similarity=0.339 Sum_probs=79.4
Q ss_pred cccEEEEcccCcccC-ceEecchHHHHhhCCCCCc-------eEEEEcCCCCEEEEEEEEe--CCeEEEcccHHHHHhHc
Q 041048 5 SCIFYKLIVPSILQD-KKLRIPDKFVQKFGDELSS-------IAKFTIPSGRMWFVELKKC--NKQLWFDIGWHEFIEHC 74 (335)
Q Consensus 5 ~~~Ffk~~~~~~~~~-~~l~IP~~F~~~~~~~~~~-------~v~L~~~~g~~W~V~l~~~--~~~~~~~~GW~~F~~~~ 74 (335)
.+-|.|+|++++... .+|.||..|++.|.+.+.. .+.+.|+.|+.|+|.+... ....+|..||.+||++|
T Consensus 4 ~~iF~K~Lt~sDv~~~~rL~iP~~~~~~~lp~~~~~~~~~~~~~~~~d~~g~~W~~~~~~~~~~~~~~l~~GW~~Fv~~~ 83 (117)
T d1wida_ 4 EALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEK 83 (117)
T ss_dssp EEEEEEECCTTTTSSSCCEEECHHHHTTTSCCCSSCCSSCCEEEEEEETTTEEEEEEEEEETTTTEEEEESSHHHHHHHT
T ss_pred ceEEEEEecchhcCCCCEEEECHHHHHHhCCccccccCCCcEEEEEEeCCCCEEEEEEEEECCCCceEEecCHHHHHHHc
Confidence 356999999998853 4799999999999865433 4899999999999999875 35678999999999999
Q ss_pred CCCCCcEEEEEEcc--cceEEEEEEeCCc
Q 041048 75 SIHSGYFLIFKYQG--NSNFNVYIFDLAI 101 (335)
Q Consensus 75 ~L~~Gd~lvF~~~g--~~~F~V~if~~~~ 101 (335)
+|++||.|+|..+. +..|.|.+...++
T Consensus 84 ~Lk~GD~~~F~~~~~~~~~~~i~~r~~~~ 112 (117)
T d1wida_ 84 NLRAGDVVSFSRSNGQDQQLYIGWKSRSG 112 (117)
T ss_dssp TCCTTCEEEEEECCSSSCCEEEEEECCCS
T ss_pred CCCCCCEEEEEEEeCCCCEEEEEEEECCC
Confidence 99999999999875 3466666665443
No 5
>d1na6a1 b.142.1.1 (A:4-178) Restriction endonuclease EcoRII, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.11 E-value=5e-06 Score=67.52 Aligned_cols=99 Identities=11% Similarity=0.107 Sum_probs=74.0
Q ss_pred CCCCeEEEEccCcccCCCce----eecCHHHHHhhcCCCC--------eeEEEE--eCCCCeEEEEEEEeC--------C
Q 041048 228 SSNPLFRVILRPSYVYRTLL----LHVPTSFARKYLNGIK--------GYITII--DSNGKQWPVRCIFKN--------G 285 (335)
Q Consensus 228 ~~~p~F~~~m~~s~v~~~~~----L~iP~~F~~~~l~~~~--------~~i~L~--~~~G~~W~v~~~~~~--------~ 285 (335)
.....|.+.|+++++...-. ++||++++..++|... +.+.|. |.+|..|++++.+.+ +
T Consensus 13 ~~~~~F~K~LtasD~g~tg~HQaG~~IPK~~ae~~FP~l~~~~e~nP~~~l~~~i~d~~g~~w~fR~iYyn~~~~ggTRn 92 (175)
T d1na6a1 13 ENYFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVSSHDCPDSEARAIYYNSAHFGKTRN 92 (175)
T ss_dssp SSEEEEEEECCHHHHTCC---CCCCCCCHHHHHHHCGGGCCCSSSSCEEEEEEEESSSCCCCEEEEEEEECGGGTTSCCC
T ss_pred CceEEEEEEcccccccccCCccceeeecHHHHHHhCCCCCcccccCCCceEEEEEecCCCCeeEEEEEEECCccCCCccc
Confidence 34567999999999886533 9999999999987311 145555 888999999998743 3
Q ss_pred eeeeccChhHhhhhcCCCCCCEEEEEEecCC--CcEEEEEEEe
Q 041048 286 GAKFSKGWPEFVWENNLDESDVCVFELIKSN--DVTLKATIFR 326 (335)
Q Consensus 286 ~~~l~~GW~~F~~~n~L~~GD~cvFel~~~~--~~~~~V~Ifr 326 (335)
.+.|+.+|+.|...+.+..||..+|-+.... .-..-|.|..
T Consensus 93 eyRiT~~g~~~~~~~~~n~G~l~i~af~~~~~~~~~~~~~vwv 135 (175)
T d1na6a1 93 EKRITRWGRGSPLQDPENTGALTLLAFKLDEQGGDCKEVNIWV 135 (175)
T ss_dssp EEEEECCCTTSGGGCGGGTTCEEEEEEECCTTSCCCCEEEEEE
T ss_pred cEEEEeccccccccCccccccEEEEEeecCCCCCceeEEEEEE
Confidence 5889999999999999999999999885322 2234444443
No 6
>d1na6a1 b.142.1.1 (A:4-178) Restriction endonuclease EcoRII, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.47 E-value=9.8e-05 Score=59.73 Aligned_cols=82 Identities=10% Similarity=0.012 Sum_probs=66.1
Q ss_pred ccEEEEcccCcccCce-----EecchHHHHhhCCCCC-----c---eEEEE--cCCCCEEEEEEEEeC--------CeEE
Q 041048 6 CIFYKLIVPSILQDKK-----LRIPDKFVQKFGDELS-----S---IAKFT--IPSGRMWFVELKKCN--------KQLW 62 (335)
Q Consensus 6 ~~Ffk~~~~~~~~~~~-----l~IP~~F~~~~~~~~~-----~---~v~L~--~~~g~~W~V~l~~~~--------~~~~ 62 (335)
.-|.|++++++..... +.||+.++..+.+.+. + .+.|+ |..|..|+++....+ +...
T Consensus 16 ~~F~K~LtasD~g~tg~HQaG~~IPK~~ae~~FP~l~~~~e~nP~~~l~~~i~d~~g~~w~fR~iYyn~~~~ggTRneyR 95 (175)
T d1na6a1 16 FVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVSSHDCPDSEARAIYYNSAHFGKTRNEKR 95 (175)
T ss_dssp EEEEEECCHHHHTCC---CCCCCCCHHHHHHHCGGGCCCSSSSCEEEEEEEESSSCCCCEEEEEEEECGGGTTSCCCEEE
T ss_pred EEEEEEcccccccccCCccceeeecHHHHHHhCCCCCcccccCCCceEEEEEecCCCCeeEEEEEEECCccCCCccccEE
Confidence 4589999998775433 9999999999876321 1 34434 899999999998764 5688
Q ss_pred EcccHHHHHhHcCCCCCcEEEEEEc
Q 041048 63 FDIGWHEFIEHCSIHSGYFLIFKYQ 87 (335)
Q Consensus 63 ~~~GW~~F~~~~~L~~Gd~lvF~~~ 87 (335)
|+.+|+.|...+.+..||+++|-+.
T Consensus 96 iT~~g~~~~~~~~~n~G~l~i~af~ 120 (175)
T d1na6a1 96 ITRWGRGSPLQDPENTGALTLLAFK 120 (175)
T ss_dssp EECCCTTSGGGCGGGTTCEEEEEEE
T ss_pred EEeccccccccCccccccEEEEEee
Confidence 9999999999999999999999884
No 7
>d2d9ra1 b.129.2.1 (A:20-104) Hypothetical protein PG0164 {Porphyromonas gingivalis [TaxId: 837]}
Probab=71.29 E-value=9.2 Score=26.21 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=50.9
Q ss_pred EEEEccCcccCCCceeecCHHHHHhhcCCCCeeEEEEeCCCCeEEEEEEEeC-CeeeeccChhHhhhhcCCCCCCEEEEE
Q 041048 233 FRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRCIFKN-GGAKFSKGWPEFVWENNLDESDVCVFE 311 (335)
Q Consensus 233 F~~~m~~s~v~~~~~L~iP~~F~~~~l~~~~~~i~L~~~~G~~W~v~~~~~~-~~~~l~~GW~~F~~~n~L~~GD~cvFe 311 (335)
|..+|.+..-...-.+.||..-.+.+.. ..-.|...- +|..|+..+...+ +.++|- ==++..++.++++||.+.++
T Consensus 5 F~A~i~~~~g~~~~fv~vP~dv~~~~g~-G~v~V~~tI-~g~~~~tsl~p~g~G~~~Lp-ik~~iRk~~g~~~Gd~V~V~ 81 (85)
T d2d9ra1 5 FDAIIRQVPDMDAAYVEIPFDVKTVYGK-GRVRVNATF-DGYPYTGYIVRMGLPCHILG-LRQDIRRAIGKQPGDSVYVT 81 (85)
T ss_dssp EEEECEECTTCSCEEEECCSCHHHHHCS-SCEEEEEEE-TTEEEEEEEEESSTTCEEEE-ECHHHHHHHTCCTTSEEEEE
T ss_pred EEEEEEEcCCCCeEEEEcCHHHHhhcCC-CeeEEEEEE-CCEEEEEEEEECCCCcEEEE-ecHHHHHHcCCCCCCEEEEE
Confidence 6667755432233468999998877652 233333333 6799999876533 443331 12588899999999999988
Q ss_pred Ee
Q 041048 312 LI 313 (335)
Q Consensus 312 l~ 313 (335)
|.
T Consensus 82 L~ 83 (85)
T d2d9ra1 82 LL 83 (85)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 8
>d2cbpa_ b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]}
Probab=50.40 E-value=5 Score=28.29 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=19.9
Q ss_pred hhhcCCCCCCEEEEEEecCCCcEEEE
Q 041048 297 VWENNLDESDVCVFELIKSNDVTLKA 322 (335)
Q Consensus 297 ~~~n~L~~GD~cvFel~~~~~~~~~V 322 (335)
+..+.+.+||.++|++.....-++.|
T Consensus 19 a~~~~F~vGD~LvF~y~~~~h~V~~V 44 (96)
T d2cbpa_ 19 PKGKRFRAGDILLFNYNPSMHNVVVV 44 (96)
T ss_dssp TTTCCBCTTCEEEEECCTTTCCEEEE
T ss_pred hCCCcEecCCEEEEecCCCCceEEEE
Confidence 57789999999999998764334444
No 9
>d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=49.87 E-value=4.9 Score=28.02 Aligned_cols=25 Identities=24% Similarity=0.369 Sum_probs=19.6
Q ss_pred hhhcCCCCCCEEEEEEecCCCcEEE
Q 041048 297 VWENNLDESDVCVFELIKSNDVTLK 321 (335)
Q Consensus 297 ~~~n~L~~GD~cvFel~~~~~~~~~ 321 (335)
+..+.+.+||.++|++......++.
T Consensus 14 a~~~~F~vGD~LvF~y~~~~h~V~~ 38 (91)
T d1f56a_ 14 ARGKSFRAGDVLVFKYIKGQHNVVA 38 (91)
T ss_dssp CTTCCBCTTCEEEEECCBTTBCEEE
T ss_pred ccCCCCcCCCEEEEEEcCCCCEEEE
Confidence 6788999999999999876533443
No 10
>d1oa8a_ b.145.1.1 (A:) Ataxin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.61 E-value=7.1 Score=28.64 Aligned_cols=20 Identities=30% Similarity=0.699 Sum_probs=14.7
Q ss_pred ccChhHhh----------hhcCCCCCCEEE
Q 041048 290 SKGWPEFV----------WENNLDESDVCV 309 (335)
Q Consensus 290 ~~GW~~F~----------~~n~L~~GD~cv 309 (335)
..||..|. ..+.|++||+|+
T Consensus 94 ~kgW~s~~P~~t~~~~~i~~~~L~vGD~c~ 123 (128)
T d1oa8a_ 94 GQGWSSCCPERTSQLFDLPCSKLSVGDVCI 123 (128)
T ss_dssp TTEEEESCHHHHHHHHCCCCEECCTTCEEE
T ss_pred CCceeeecccccccccCceeeecccCCEEE
Confidence 45897654 355799999986
No 11
>d1ws8a_ b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663]}
Probab=44.38 E-value=9.7 Score=26.96 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=19.9
Q ss_pred hhhhcCCCCCCEEEEEEecCCCcEEE
Q 041048 296 FVWENNLDESDVCVFELIKSNDVTLK 321 (335)
Q Consensus 296 F~~~n~L~~GD~cvFel~~~~~~~~~ 321 (335)
-+..+.+.+||.++|++.....-+..
T Consensus 24 Wa~~~~f~vGD~l~F~y~~~~h~V~~ 49 (104)
T d1ws8a_ 24 WASSNKFHVGDSLLFNYNNKFHNVLQ 49 (104)
T ss_dssp HHHTSCBCTTCEEEEECCTTTCCEEE
T ss_pred HhhCCcCCCCCEEEEEECCCCceEEE
Confidence 37888999999999999876433333
No 12
>d2cbpa_ b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]}
Probab=40.01 E-value=7.6 Score=27.28 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=16.8
Q ss_pred HhHcCCCCCcEEEEEEcccc
Q 041048 71 IEHCSIHSGYFLIFKYQGNS 90 (335)
Q Consensus 71 ~~~~~L~~Gd~lvF~~~g~~ 90 (335)
+..+.+..||.|+|+|....
T Consensus 19 a~~~~F~vGD~LvF~y~~~~ 38 (96)
T d2cbpa_ 19 PKGKRFRAGDILLFNYNPSM 38 (96)
T ss_dssp TTTCCBCTTCEEEEECCTTT
T ss_pred hCCCcEecCCEEEEecCCCC
Confidence 56678899999999999753
No 13
>d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=39.88 E-value=7.3 Score=27.02 Aligned_cols=20 Identities=30% Similarity=0.449 Sum_probs=17.2
Q ss_pred HhHcCCCCCcEEEEEEcccc
Q 041048 71 IEHCSIHSGYFLIFKYQGNS 90 (335)
Q Consensus 71 ~~~~~L~~Gd~lvF~~~g~~ 90 (335)
+..+.+..||.|+|.|....
T Consensus 14 a~~~~F~vGD~LvF~y~~~~ 33 (91)
T d1f56a_ 14 ARGKSFRAGDVLVFKYIKGQ 33 (91)
T ss_dssp CTTCCBCTTCEEEEECCBTT
T ss_pred ccCCCCcCCCEEEEEEcCCC
Confidence 66888999999999998753
No 14
>d1jera_ b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]}
Probab=35.37 E-value=8.2 Score=27.56 Aligned_cols=20 Identities=10% Similarity=0.092 Sum_probs=16.9
Q ss_pred hhhcCCCCCCEEEEEEecCC
Q 041048 297 VWENNLDESDVCVFELIKSN 316 (335)
Q Consensus 297 ~~~n~L~~GD~cvFel~~~~ 316 (335)
+..+.+++||.++|++....
T Consensus 27 a~~~~f~vGD~l~F~~~~~~ 46 (110)
T d1jera_ 27 AAGKTFRVGDSLQFNFPANA 46 (110)
T ss_dssp HHTCCEETTCEEEECCCTTT
T ss_pred hcCCcEeCCCEEEEEeCCCC
Confidence 67888999999999987654
No 15
>d1mvfd_ b.129.1.1 (D:) MazE {Escherichia coli [TaxId: 562]}
Probab=35.17 E-value=14 Score=21.90 Aligned_cols=28 Identities=21% Similarity=0.425 Sum_probs=23.1
Q ss_pred ceEecchHHHHhhCCCCCceEEEEcCCC
Q 041048 20 KKLRIPDKFVQKFGDELSSIAKFTIPSG 47 (335)
Q Consensus 20 ~~l~IP~~F~~~~~~~~~~~v~L~~~~g 47 (335)
.-++||..+++..+......+.+...+|
T Consensus 10 ~gvriP~~~l~~l~l~~g~~vei~v~~g 37 (44)
T d1mvfd_ 10 PAVRIPATLMQALNLNIDDEVKIDLVDG 37 (44)
T ss_dssp EEEECCHHHHHHTTCCTTCBEEEEEETT
T ss_pred eeEEccHHHHHHcCCCCCCEEEEEEECC
Confidence 4689999999999988888887776555
No 16
>d1jala2 d.15.10.2 (A:279-363) YchF GTP-binding protein, C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=23.42 E-value=13 Score=25.45 Aligned_cols=16 Identities=13% Similarity=0.503 Sum_probs=14.0
Q ss_pred hHcCCCCCcEEEEEEc
Q 041048 72 EHCSIHSGYFLIFKYQ 87 (335)
Q Consensus 72 ~~~~L~~Gd~lvF~~~ 87 (335)
++|-++.||++.|++.
T Consensus 69 KdYiv~DGDii~F~fN 84 (85)
T d1jala2 69 KDYIVQDGDVMHFRFN 84 (85)
T ss_dssp TTCBCCTTCEEEEESC
T ss_pred CCCcEeCCCEEEEEec
Confidence 6789999999999863
No 17
>d1yuaa2 g.41.3.3 (A:66-122) Prokaryotic DNA topoisomerase I, a C-terminal fragment {Escherichia coli [TaxId: 562]}
Probab=20.73 E-value=11 Score=23.81 Aligned_cols=31 Identities=26% Similarity=0.473 Sum_probs=23.7
Q ss_pred EEcCCCCEEEEEEEEeCCeEEE-------cccHHHHHh
Q 041048 42 FTIPSGRMWFVELKKCNKQLWF-------DIGWHEFIE 72 (335)
Q Consensus 42 L~~~~g~~W~V~l~~~~~~~~~-------~~GW~~F~~ 72 (335)
..||+|+.--|++.+..+..|+ ..||.+|-.
T Consensus 11 ~~D~dGn~~vvRfsRK~k~qYv~sE~dGK~TgW~a~y~ 48 (57)
T d1yuaa2 11 QQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV 48 (57)
T ss_dssp SSCTTCCCEEEEEETTTTEEEEEECCTTSCCCCCEEBC
T ss_pred ccCCCCCEeEEEEecCCCeEEEEeecCCcccccEEEee
Confidence 3589999999999988877777 357776643
Done!