BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041049
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M4H4|GRI22_VITVI Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2
SV=1
Length = 220
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 168/222 (75%), Gaps = 7/222 (3%)
Query: 1 MAKS----LVSFTIIFAMMFLPLLSNAISQCNGPCRTPDDCEGELICINGICNDDPEVGS 56
MAKS L S ++F ++ LP L+ +S C G C+T +D EG+LICING CNDDPEVG+
Sbjct: 1 MAKSALVWLASVCLVFNILSLPFLALGLSSCGGSCQTLNDYEGQLICINGECNDDPEVGT 60
Query: 57 HTCTGGGGGGGGGGGGGVSCHSSGTLRCHG-KPYPLYSCSPPVTSSTDAKLTNNDFSEGG 115
H C GG +C SGTL C G KP Y+CSPP+TSST A LTNN+F +GG
Sbjct: 61 HIC--GGNSSTPSPPPPSTCQPSGTLACKGGKPKNTYTCSPPITSSTPAVLTNNNFEKGG 118
Query: 116 EGGDPSECDGKYHDNSVPVVALSTGWYNGGSRCGHMIKITAQNGRSVMAKVVDECDSMHG 175
+GG PS CD KYHDNS +VALSTGWYNGGSRCG MI+ITAQNGRSV+AKVVDECDSMHG
Sbjct: 119 DGGGPSACDNKYHDNSERIVALSTGWYNGGSRCGKMIRITAQNGRSVLAKVVDECDSMHG 178
Query: 176 CDSEHADEPPCDNDIVDGSDAVWSALGLDKDIGVVGVTWSMA 217
CD EHA +PPCDN+IVDGS+AVW+ALGLD +IG V VTWSMA
Sbjct: 179 CDKEHAGQPPCDNNIVDGSNAVWNALGLDINIGEVDVTWSMA 220
>sp|P84527|KIWEL_ACTDE Kiwellin OS=Actinidia deliciosa PE=1 SV=1
Length = 189
Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/194 (70%), Positives = 153/194 (78%), Gaps = 5/194 (2%)
Query: 24 ISQCNGPCRTPDDCEGELICINGICNDDPEVGSHTCTGGGGGGGGGGGGGVSCHSSGTLR 83
IS CNGPCR +DC+G+LICI G CNDDP+VG+H C G GG C SGTL
Sbjct: 1 ISSCNGPCRDLNDCDGQLICIKGKCNDDPQVGTHICRGTTHSHQPGG-----CKPSGTLT 55
Query: 84 CHGKPYPLYSCSPPVTSSTDAKLTNNDFSEGGEGGDPSECDGKYHDNSVPVVALSTGWYN 143
C GK YP Y CSPPVTSST AKLTNNDFSEGG+ G PSECD YH+N+ +VALSTGWYN
Sbjct: 56 CRGKSYPTYDCSPPVTSSTPAKLTNNDFSEGGDDGGPSECDESYHNNNERIVALSTGWYN 115
Query: 144 GGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSEHADEPPCDNDIVDGSDAVWSALGL 203
GGSRCG MI+ITA NG+SV AKVVDECDS HGCD EHA +PPC N+IVDGS+AVWSALGL
Sbjct: 116 GGSRCGKMIRITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGL 175
Query: 204 DKDIGVVGVTWSMA 217
DK++GVV +TWSMA
Sbjct: 176 DKNVGVVDITWSMA 189
>sp|Q6H5X0|RIP2_ORYSJ Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica
GN=Os02g0637000 PE=3 SV=1
Length = 192
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 106/154 (68%), Gaps = 13/154 (8%)
Query: 76 CHSSGTLR------CH-----GKPYPLYSCSPPVTSSTDAKLTNNDFSEGGEGGDPSECD 124
C+ SGTLR C G+ YP Y+CSP T ST A +T NDF GG+GGDPSECD
Sbjct: 40 CNPSGTLRPSRSHSCQDCCKAGRSYPTYACSPATTGSTKAVMTLNDFEAGGDGGDPSECD 99
Query: 125 GKYHDNSVPVVALSTGWYNGGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSEHADEP 184
GK+H N+ VVALSTGWY G RC I+I A NGRSV+AKVVDECDS+HGCD EHA +P
Sbjct: 100 GKFHKNTERVVALSTGWYANGRRCNKNIRINA-NGRSVLAKVVDECDSLHGCDKEHAYQP 158
Query: 185 PCDNDIVDGSDAVWSALGLD-KDIGVVGVTWSMA 217
PC ++VD S AVW AL + +D+G +TWS A
Sbjct: 159 PCRPNVVDASQAVWDALRITGEDVGEYDITWSDA 192
>sp|Q7XVA8|RIP1_ORYSJ Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica
GN=Os04g0364800 PE=3 SV=2
Length = 183
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/148 (60%), Positives = 105/148 (70%), Gaps = 8/148 (5%)
Query: 77 HSSGTLRCH-----GKPYPLYSCSPPVT-SSTDAKLTNNDFSEGGEGGDPSECDGKYHDN 130
SS T RC G+ YP Y+CSPP T SSTDA +T NDF GG+GG PSECD YH N
Sbjct: 37 RSSTTHRCQDCCKAGQSYPTYTCSPPTTGSSTDAVMTLNDFDAGGDGGGPSECDEMYHSN 96
Query: 131 SVPVVALSTGWYNGGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSEHADEPPCDNDI 190
+ VVALSTGWY GGSRCG ++I A NGRSV+AKVVDECDS GCD EHA +PPC ++
Sbjct: 97 TELVVALSTGWYAGGSRCGKSVRINA-NGRSVLAKVVDECDSQRGCDEEHAYQPPCRPNV 155
Query: 191 VDGSDAVWSALGLD-KDIGVVGVTWSMA 217
VD S AVW ALG+ +D+G +TWS A
Sbjct: 156 VDASQAVWDALGITGEDVGEYDITWSDA 183
>sp|Q9FWU1|RIP4_ORYSJ Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica
GN=Os10g0490666 PE=3 SV=2
Length = 216
Score = 151 bits (382), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 100/134 (74%), Gaps = 4/134 (2%)
Query: 86 GKPYPLYSCSPPVTSS--TDAKLTNNDFSEGGEGGDPSECDGKYHDNSVPVVALSTGWY- 142
G+ YP + CSPPV+S+ T A LT N F+ GG+GG S CDG++H ++ VVALS+GW
Sbjct: 81 GRRYPQFRCSPPVSSARPTPATLTLNSFARGGDGGGRSSCDGRFHPDTAMVVALSSGWLR 140
Query: 143 -NGGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSEHADEPPCDNDIVDGSDAVWSAL 201
+G SRC MI++ A NGRS +A+VVDECDS++GCD+EH EPPC ND+VDGS AVW AL
Sbjct: 141 LDGASRCNRMIRVAAGNGRSALARVVDECDSVNGCDAEHNFEPPCPNDVVDGSPAVWKAL 200
Query: 202 GLDKDIGVVGVTWS 215
GLD+ +G VTWS
Sbjct: 201 GLDEGVGEFKVTWS 214
>sp|Q8LN49|RIP5_ORYSJ Putative ripening-related protein 5 OS=Oryza sativa subsp. japonica
GN=Os10g0490500 PE=3 SV=1
Length = 276
Score = 137 bits (344), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 85/131 (64%), Gaps = 19/131 (14%)
Query: 86 GKPYPLYSCSPPVTSSTDAKLTNNDFSEGGEGGDPSECDGKYHDNSVPVVALSTGWYNGG 145
GK YP Y F +G +GG PSECD YH + VVALSTGW+ G
Sbjct: 52 GKAYPQYR-----------------FEKGKDGGGPSECDNAYHSDGELVVALSTGWFAGT 94
Query: 146 SRCGHMIKITAQNG--RSVMAKVVDECDSMHGCDSEHADEPPCDNDIVDGSDAVWSALGL 203
+RCGH ++ITA G RSV+AKVVDECDS+HGCD EH E PC N+IVD S AVW ALGL
Sbjct: 95 ARCGHRVRITASGGGGRSVVAKVVDECDSVHGCDGEHNYEAPCGNNIVDASPAVWDALGL 154
Query: 204 DKDIGVVGVTW 214
DK++G+ +TW
Sbjct: 155 DKNVGMEHITW 165
>sp|Q9FWT5|RIP3_ORYSJ Ripening-related protein 3 OS=Oryza sativa subsp. japonica
GN=Os10g0490100 PE=2 SV=1
Length = 213
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
Query: 86 GKPYPLYSCSPPVT---SSTDAKLTNNDFSEGGEGGDPSECDGKYHDNSVPVVALSTGWY 142
G Y Y+CSPPV + T A LT N F++GG+GG C G+++D+ VVALSTGW+
Sbjct: 79 GVQYMTYACSPPVAAGGTGTAALLTLNSFADGGDGGGAPSCTGRFYDDGQLVVALSTGWF 138
Query: 143 NGGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSEHADEPPCDNDIVDGSDAVWSALG 202
+G SRC + I A G SV A VVDECDS GCDS+H EPPC N+IVDGS AVW ALG
Sbjct: 139 DGRSRCEKDVVIRASGGASVTAMVVDECDSQRGCDSDHNFEPPCRNNIVDGSPAVWDALG 198
Query: 203 LDKDIGVVGVTWSMA 217
L+KD G +TWS A
Sbjct: 199 LNKDDGEAQITWSDA 213
>sp|Q7XD66|RIP6_ORYSJ Putative ripening-related protein 6 OS=Oryza sativa subsp. japonica
GN=Os10g0489301 PE=3 SV=1
Length = 167
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 90/156 (57%), Gaps = 27/156 (17%)
Query: 78 SSGTLRCHGKPYP---------------LYSCSPPVTSS--TDAKLTNNDFSEGGEGGDP 120
S R HGKP P + CS P S T A +T N F EG +GG P
Sbjct: 19 SCAAARRHGKPDPCDGGGGGVDSHLPPGMRRCSSPAVSEDGTPAVMTVNGFEEGEDGGGP 78
Query: 121 SECDGKYHDNSVPVVALSTGWYNGGSRCGHMIKITA-QNGRSVMAKVVDECDSMHGCDSE 179
+ CDG+YH + V ALSTGW+ GG RC I+IT+ QNGRSV+A VVDECDS HG
Sbjct: 79 AACDGRYHSDRSLVAALSTGWFAGGRRCHRGIRITSRQNGRSVVATVVDECDSRHG---- 134
Query: 180 HADEPPCDNDIVDGSDAVWSALGLDKDIGVVGVTWS 215
C +DIVD S AVWSALGLD ++G V VTWS
Sbjct: 135 -----GCKDDIVDTSAAVWSALGLDTNVGEVPVTWS 165
>sp|Q7XD65|RIP7_ORYSJ Putative ripening-related protein 7 OS=Oryza sativa subsp. japonica
GN=Os10g0489400 PE=3 SV=1
Length = 162
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 68/121 (56%), Gaps = 19/121 (15%)
Query: 104 AKLTNNDFSEGGEGGDPSECDGKYHDNSVPVVALSTGWYNGGSRCGHMIKITAQN----- 158
A +T N F +G +GG P+ CDG YH + +VALST W+ GG RC I+IT
Sbjct: 50 AVMTVNGFEKGEDGGGPAACDGHYHSDGELIVALSTEWFAGGRRCHRRIRITPSEHGRRG 109
Query: 159 ----GRSVMAKVVDECDSMHGCDSEHADEPPCDNDIVDGSDAVWSALGLDKDIGVVGVTW 214
R+V A VVDECDS G C +D+VD S AVW ALGLD D G V VTW
Sbjct: 110 GGGGRRAVEATVVDECDSRRG----------CKDDVVDSSPAVWRALGLDTDSGEVRVTW 159
Query: 215 S 215
S
Sbjct: 160 S 160
>sp|P85261|KIWEL_ACTCH Kiwellin (Fragments) OS=Actinidia chinensis PE=1 SV=1
Length = 34
Score = 33.9 bits (76), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 24 ISQCNGPCRTPDDCEGELIC 43
IS CNGPCR +DC+G+LIC
Sbjct: 1 ISSCNGPCRDLNDCDGQLIC 20
>sp|Q54C78|EXPL9_DICDI Expansin-like protein 9 OS=Dictyostelium discoideum GN=expl9 PE=3
SV=1
Length = 535
Score = 33.9 bits (76), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 131 SVPVVALSTGWYNGGSRCGHMIKITAQNGRSVMAKVVDECDSMHGCDSE 179
S+ ALS +NGG+RCG ++T G++V+ V D C+S C +
Sbjct: 58 SIGTAALSLSAFNGGARCGQCYELTGPLGKTVVM-VTDGCNSGEACTQK 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.137 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,937,522
Number of Sequences: 539616
Number of extensions: 5012910
Number of successful extensions: 62545
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 41574
Number of HSP's gapped (non-prelim): 12628
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)