Query 041055
Match_columns 526
No_of_seqs 269 out of 2162
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 03:21:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041055.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041055hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.4E-82 3.1E-87 635.2 47.8 451 67-526 33-498 (537)
2 KOG1177 Long chain fatty acid 100.0 8.2E-77 1.8E-81 552.7 36.0 472 48-526 50-553 (596)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 7.7E-76 1.7E-80 583.4 43.4 459 48-525 8-487 (528)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 9E-74 2E-78 592.6 49.2 471 48-526 11-493 (534)
5 PLN02574 4-coumarate--CoA liga 100.0 2.5E-71 5.5E-76 581.1 55.1 495 21-526 16-520 (560)
6 PLN02654 acetate-CoA ligase 100.0 5.7E-70 1.2E-74 578.9 49.0 477 41-526 80-606 (666)
7 PTZ00342 acyl-CoA synthetase; 100.0 4.4E-69 9.5E-74 569.4 48.5 450 48-509 61-641 (746)
8 PLN02614 long-chain acyl-CoA s 100.0 5.5E-69 1.2E-73 570.3 47.9 448 48-509 45-567 (666)
9 TIGR02316 propion_prpE propion 100.0 2.1E-68 4.5E-73 565.6 49.2 476 44-526 47-570 (628)
10 PTZ00237 acetyl-CoA synthetase 100.0 7.4E-69 1.6E-73 568.6 45.7 478 41-526 51-589 (647)
11 PLN02246 4-coumarate--CoA liga 100.0 7.2E-68 1.6E-72 553.1 51.5 472 47-526 22-502 (537)
12 PRK07529 AMP-binding domain pr 100.0 2.9E-68 6.2E-73 564.1 48.4 468 48-526 25-535 (632)
13 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 4.7E-68 1E-72 563.7 49.1 477 41-526 49-568 (625)
14 PLN02736 long-chain acyl-CoA s 100.0 1.4E-68 3.1E-73 568.7 45.2 447 48-510 44-559 (651)
15 PLN02860 o-succinylbenzoate-Co 100.0 2.2E-68 4.8E-73 559.3 45.6 465 45-525 4-517 (563)
16 PRK07788 acyl-CoA synthetase; 100.0 3.2E-68 6.9E-73 557.3 45.6 457 49-526 50-517 (549)
17 PLN02861 long-chain-fatty-acid 100.0 1.6E-68 3.5E-73 567.2 43.5 446 48-508 43-563 (660)
18 PLN02330 4-coumarate--CoA liga 100.0 3.7E-67 7.9E-72 548.6 51.0 475 47-526 27-507 (546)
19 PRK00174 acetyl-CoA synthetase 100.0 3.6E-67 7.8E-72 557.8 51.3 473 45-526 63-576 (637)
20 PRK06334 long chain fatty acid 100.0 1.9E-67 4.2E-72 548.2 46.1 457 48-525 19-499 (539)
21 COG1021 EntE Peptide arylation 100.0 1.2E-68 2.5E-73 487.1 29.2 462 48-525 28-502 (542)
22 PRK05677 long-chain-fatty-acid 100.0 1.5E-66 3.2E-71 545.6 49.5 488 28-526 4-523 (562)
23 KOG1256 Long-chain acyl-CoA sy 100.0 5.3E-67 1.1E-71 518.4 42.6 457 41-510 68-599 (691)
24 PRK04319 acetyl-CoA synthetase 100.0 2.8E-66 6E-71 544.5 48.5 469 46-526 40-525 (570)
25 COG1022 FAA1 Long-chain acyl-C 100.0 2.6E-67 5.7E-72 529.3 38.4 436 48-510 16-520 (613)
26 PRK09274 peptide synthase; Pro 100.0 2.8E-66 6.2E-71 543.1 45.7 461 48-525 6-508 (552)
27 PRK10524 prpE propionyl-CoA sy 100.0 8.5E-66 1.8E-70 546.8 47.8 478 42-526 46-571 (629)
28 PRK13382 acyl-CoA synthetase; 100.0 1.1E-65 2.4E-70 535.7 45.4 455 48-526 43-506 (537)
29 PRK13295 cyclohexanecarboxylat 100.0 3.5E-65 7.7E-70 533.8 49.1 462 48-524 24-507 (547)
30 PLN02387 long-chain-fatty-acid 100.0 1.3E-65 2.9E-70 547.1 45.7 448 48-509 58-606 (696)
31 PRK08314 long-chain-fatty-acid 100.0 5.5E-65 1.2E-69 533.1 49.0 464 48-526 10-508 (546)
32 PLN03052 acetate--CoA ligase; 100.0 5.2E-65 1.1E-69 542.1 48.7 473 42-524 168-681 (728)
33 PRK06060 acyl-CoA synthetase; 100.0 2.1E-65 4.5E-70 549.8 45.4 449 49-526 5-458 (705)
34 PRK06839 acyl-CoA synthetase; 100.0 4.6E-65 1E-69 527.8 45.9 453 49-526 3-461 (496)
35 PRK03584 acetoacetyl-CoA synth 100.0 7.1E-65 1.5E-69 541.5 48.4 471 41-526 79-591 (655)
36 PRK12583 acyl-CoA synthetase; 100.0 2E-64 4.4E-69 530.4 50.1 472 48-526 18-518 (558)
37 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.1E-64 2.5E-69 537.6 47.9 469 42-526 81-592 (652)
38 PRK07656 long-chain-fatty-acid 100.0 2.8E-64 6.1E-69 524.2 50.0 468 48-526 5-482 (513)
39 PRK05852 acyl-CoA synthetase; 100.0 7.7E-65 1.7E-69 529.9 45.7 468 48-526 16-498 (534)
40 PRK07769 long-chain-fatty-acid 100.0 3.6E-65 7.8E-70 541.9 43.6 456 48-526 21-576 (631)
41 PRK05605 long-chain-fatty-acid 100.0 3.2E-64 7E-69 529.8 49.6 469 48-526 32-535 (573)
42 PRK08315 AMP-binding domain pr 100.0 3.3E-64 7.2E-69 528.7 48.9 472 48-526 16-517 (559)
43 PRK07638 acyl-CoA synthetase; 100.0 5.8E-64 1.3E-68 517.7 46.6 446 49-526 2-447 (487)
44 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 8.6E-64 1.9E-68 521.2 48.1 461 48-525 23-496 (527)
45 PRK08180 feruloyl-CoA synthase 100.0 8.8E-65 1.9E-69 536.5 41.1 460 48-526 39-548 (614)
46 PRK06155 crotonobetaine/carnit 100.0 1.3E-63 2.9E-68 520.4 49.4 460 48-526 21-490 (542)
47 PTZ00216 acyl-CoA synthetase; 100.0 1.4E-64 3E-69 540.6 42.6 445 48-508 69-608 (700)
48 PLN02430 long-chain-fatty-acid 100.0 3.2E-64 7E-69 533.3 44.2 448 48-509 42-564 (660)
49 PRK09088 acyl-CoA synthetase; 100.0 1.3E-63 2.9E-68 515.4 47.3 439 66-526 10-451 (488)
50 PRK07514 malonyl-CoA synthase; 100.0 2.1E-63 4.6E-68 516.2 48.9 458 49-526 4-467 (504)
51 PRK06145 acyl-CoA synthetase; 100.0 7.5E-64 1.6E-68 518.6 45.4 461 48-526 2-463 (497)
52 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2E-63 4.4E-68 519.7 47.8 462 48-524 22-505 (538)
53 PRK07786 long-chain-fatty-acid 100.0 5.7E-63 1.2E-67 516.5 51.0 466 48-526 17-490 (542)
54 PRK08008 caiC putative crotono 100.0 2.7E-63 5.8E-68 516.9 47.6 467 48-526 7-488 (517)
55 PRK08316 acyl-CoA synthetase; 100.0 2.7E-63 5.8E-68 518.1 47.5 466 48-526 11-485 (523)
56 PRK06087 short chain acyl-CoA 100.0 5.2E-63 1.1E-67 517.9 48.2 464 48-524 23-499 (547)
57 PRK12492 long-chain-fatty-acid 100.0 9.6E-63 2.1E-67 516.8 50.1 468 48-526 24-530 (562)
58 PRK03640 O-succinylbenzoic aci 100.0 4.3E-63 9.4E-68 511.2 46.6 447 48-526 2-448 (483)
59 PRK05857 acyl-CoA synthetase; 100.0 1.3E-63 2.8E-68 520.6 42.9 461 48-523 14-490 (540)
60 PRK12476 putative fatty-acid-- 100.0 1.2E-63 2.7E-68 527.9 43.3 456 48-526 34-568 (612)
61 PRK07059 Long-chain-fatty-acid 100.0 1.2E-62 2.5E-67 516.1 50.1 488 27-526 2-524 (557)
62 TIGR03098 ligase_PEP_1 acyl-Co 100.0 6.3E-63 1.4E-67 514.2 47.1 462 50-526 2-484 (515)
63 PLN03102 acyl-activating enzym 100.0 4.6E-63 1E-67 519.8 46.2 465 48-526 14-520 (579)
64 PRK07867 acyl-CoA synthetase; 100.0 2.2E-62 4.8E-67 509.4 49.5 450 48-525 5-470 (529)
65 PRK06164 acyl-CoA synthetase; 100.0 1E-62 2.3E-67 515.0 46.6 467 48-526 10-495 (540)
66 PRK08043 bifunctional acyl-[ac 100.0 5.4E-63 1.2E-67 531.3 44.4 455 48-525 204-677 (718)
67 PRK07470 acyl-CoA synthetase; 100.0 2.2E-62 4.8E-67 511.1 47.5 464 48-526 7-484 (528)
68 PRK13388 acyl-CoA synthetase; 100.0 3.8E-62 8.3E-67 509.2 48.2 448 49-525 4-469 (540)
69 PRK05851 long-chain-fatty-acid 100.0 3.4E-63 7.3E-68 515.6 39.7 446 50-525 4-483 (525)
70 PRK12467 peptide synthase; Pro 100.0 3.9E-63 8.6E-68 604.9 45.7 454 48-526 3095-3560(3956)
71 PRK06178 acyl-CoA synthetase; 100.0 9.1E-62 2E-66 510.5 49.8 471 48-526 33-532 (567)
72 PRK10946 entE enterobactin syn 100.0 4.6E-62 1E-66 508.7 46.9 457 48-525 25-496 (536)
73 PRK13383 acyl-CoA synthetase; 100.0 3.3E-62 7.1E-67 508.0 44.6 447 48-526 35-486 (516)
74 PRK06710 long-chain-fatty-acid 100.0 1.3E-61 2.8E-66 508.9 49.3 465 49-526 25-521 (563)
75 PRK08751 putative long-chain f 100.0 1.3E-61 2.9E-66 508.7 49.3 486 30-526 7-526 (560)
76 PRK06187 long-chain-fatty-acid 100.0 1.1E-61 2.4E-66 505.9 47.5 465 48-526 6-485 (521)
77 TIGR03443 alpha_am_amid L-amin 100.0 2E-62 4.4E-67 563.9 45.8 452 48-508 236-750 (1389)
78 TIGR03205 pimA dicarboxylate-- 100.0 3.6E-61 7.9E-66 503.1 50.1 467 48-526 21-512 (541)
79 PRK07008 long-chain-fatty-acid 100.0 1.3E-61 2.8E-66 505.7 46.7 464 48-526 10-499 (539)
80 PRK07787 acyl-CoA synthetase; 100.0 8.2E-62 1.8E-66 499.2 44.3 423 65-526 14-439 (471)
81 PRK12582 acyl-CoA synthetase; 100.0 6.5E-63 1.4E-67 523.2 36.5 438 48-500 49-523 (624)
82 PRK08633 2-acyl-glycerophospho 100.0 5E-62 1.1E-66 553.5 45.8 465 48-524 615-1106(1146)
83 PRK13390 acyl-CoA synthetase; 100.0 2.2E-61 4.8E-66 500.3 45.7 449 59-526 7-472 (501)
84 PRK08279 long-chain-acyl-CoA s 100.0 2.7E-61 5.9E-66 509.8 46.8 465 45-526 34-530 (600)
85 PRK12316 peptide synthase; Pro 100.0 4E-62 8.7E-67 605.0 46.9 452 48-526 511-972 (5163)
86 PRK06188 acyl-CoA synthetase; 100.0 4.9E-61 1.1E-65 500.5 47.6 461 48-526 12-483 (524)
87 PRK10252 entF enterobactin syn 100.0 1.4E-61 3E-66 555.2 47.7 453 48-526 458-933 (1296)
88 PRK05620 long-chain-fatty-acid 100.0 3.9E-61 8.5E-66 506.1 47.1 470 48-526 10-523 (576)
89 KOG1175 Acyl-CoA synthetase [L 100.0 6.4E-62 1.4E-66 484.1 38.0 473 42-525 57-567 (626)
90 PRK12316 peptide synthase; Pro 100.0 6.4E-62 1.4E-66 603.2 46.8 456 48-526 2003-2470(5163)
91 PRK12467 peptide synthase; Pro 100.0 2.4E-61 5.1E-66 589.3 47.3 457 48-526 1574-2051(3956)
92 PRK06018 putative acyl-CoA syn 100.0 3.4E-60 7.4E-65 495.6 47.6 465 47-526 9-500 (542)
93 PLN02479 acetate-CoA ligase 100.0 1.7E-60 3.7E-65 500.1 45.0 466 48-526 20-525 (567)
94 TIGR02262 benz_CoA_lig benzoat 100.0 8.1E-60 1.8E-64 489.5 48.9 462 48-526 3-477 (508)
95 PRK08974 long-chain-fatty-acid 100.0 2.6E-59 5.7E-64 491.1 51.2 467 48-526 23-521 (560)
96 TIGR01734 D-ala-DACP-lig D-ala 100.0 3.3E-60 7.2E-65 492.1 43.4 453 50-526 2-468 (502)
97 PRK13391 acyl-CoA synthetase; 100.0 1.9E-59 4E-64 486.9 47.6 451 59-526 7-475 (511)
98 PRK12406 long-chain-fatty-acid 100.0 3.4E-59 7.4E-64 484.9 47.7 443 68-526 3-469 (509)
99 KOG1180 Acyl-CoA synthetase [L 100.0 4.7E-61 1E-65 454.8 30.6 424 76-510 87-587 (678)
100 PRK07445 O-succinylbenzoic aci 100.0 3.7E-60 8.1E-65 481.6 39.6 394 78-526 19-413 (452)
101 PRK08276 long-chain-fatty-acid 100.0 3E-59 6.4E-64 484.7 45.3 440 74-526 7-462 (502)
102 PRK08162 acyl-CoA synthetase; 100.0 8.7E-59 1.9E-63 486.0 48.4 466 48-526 18-506 (545)
103 PRK07868 acyl-CoA synthetase; 100.0 3.1E-59 6.8E-64 513.6 47.1 455 45-524 444-923 (994)
104 PRK09192 acyl-CoA synthetase; 100.0 1.5E-59 3.2E-64 494.2 42.3 456 48-525 21-528 (579)
105 PRK05691 peptide synthase; Val 100.0 1.3E-59 2.7E-64 579.1 47.5 453 48-526 1131-1594(4334)
106 PLN03051 acyl-activating enzym 100.0 1.6E-59 3.4E-64 484.8 39.1 408 111-525 1-452 (499)
107 PRK04813 D-alanine--poly(phosp 100.0 1.7E-58 3.6E-63 479.7 46.7 455 48-526 2-469 (503)
108 PRK05850 acyl-CoA synthetase; 100.0 4.7E-59 1E-63 491.1 42.7 442 49-514 2-512 (578)
109 PRK07798 acyl-CoA synthetase; 100.0 3.4E-58 7.4E-63 480.9 47.8 462 48-526 3-498 (533)
110 PRK05691 peptide synthase; Val 100.0 1E-58 2.2E-63 571.1 47.0 457 48-526 2188-2663(4334)
111 PRK06814 acylglycerophosphoeth 100.0 3.4E-58 7.3E-63 520.1 47.1 456 48-525 631-1096(1140)
112 PF00501 AMP-binding: AMP-bind 100.0 1.3E-59 2.8E-64 476.1 30.5 393 59-465 5-417 (417)
113 PRK09029 O-succinylbenzoic aci 100.0 2.1E-58 4.6E-63 472.3 39.6 407 59-526 13-419 (458)
114 TIGR01923 menE O-succinylbenzo 100.0 1.6E-56 3.4E-61 456.2 41.8 408 80-526 1-408 (436)
115 TIGR01733 AA-adenyl-dom amino 100.0 2E-56 4.4E-61 451.5 39.2 395 80-489 1-408 (408)
116 PRK07768 long-chain-fatty-acid 100.0 6.8E-56 1.5E-60 463.9 43.1 454 50-524 4-505 (545)
117 PRK08308 acyl-CoA synthetase; 100.0 2.6E-55 5.7E-60 443.2 43.0 374 76-526 6-379 (414)
118 KOG1179 Very long-chain acyl-C 100.0 1.1E-53 2.5E-58 406.5 43.1 465 47-526 76-579 (649)
119 PTZ00297 pantothenate kinase; 100.0 1.2E-45 2.6E-50 405.7 41.5 413 48-509 427-906 (1452)
120 PRK07824 O-succinylbenzoic aci 100.0 4.8E-44 1E-48 354.1 31.1 288 204-526 31-323 (358)
121 COG1020 EntF Non-ribosomal pep 100.0 2.4E-42 5.3E-47 368.4 37.0 409 48-482 227-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 9.7E-38 2.1E-42 307.2 26.8 266 208-526 95-362 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 8.2E-37 1.8E-41 308.4 28.5 302 206-526 73-394 (422)
124 TIGR03335 F390_ftsA coenzyme F 100.0 2.5E-30 5.4E-35 261.2 29.2 297 205-521 83-396 (445)
125 KOG3628 Predicted AMP-binding 100.0 1E-28 2.2E-33 250.8 33.2 480 5-508 736-1297(1363)
126 COG1541 PaaK Coenzyme F390 syn 100.0 1.2E-27 2.7E-32 228.9 26.0 284 205-510 87-385 (438)
127 KOG1178 Non-ribosomal peptide 99.9 1.2E-26 2.6E-31 243.4 19.5 434 77-526 68-545 (1032)
128 TIGR03089 conserved hypothetic 99.9 1E-25 2.3E-30 205.5 21.9 210 59-301 6-227 (227)
129 KOG3628 Predicted AMP-binding 99.8 1.4E-17 3.1E-22 170.5 20.4 417 77-511 123-650 (1363)
130 TIGR02304 aden_form_hyp probab 99.8 1.1E-16 2.3E-21 158.3 23.1 244 210-492 101-366 (430)
131 PRK09188 serine/threonine prot 99.6 7.1E-16 1.5E-20 148.9 11.5 85 434-526 207-295 (365)
132 PF04443 LuxE: Acyl-protein sy 99.3 1.7E-10 3.7E-15 111.8 21.0 231 205-460 86-350 (365)
133 PF03321 GH3: GH3 auxin-respon 98.8 2.8E-08 6.2E-13 102.1 9.5 177 323-525 266-466 (528)
134 PF13193 AMP-binding_C: AMP-bi 98.5 2.9E-07 6.4E-12 67.5 5.4 48 473-526 1-48 (73)
135 PLN02249 indole-3-acetic acid- 98.3 9.2E-05 2E-09 76.6 21.1 133 323-480 301-456 (597)
136 PLN02247 indole-3-acetic acid- 98.2 0.00025 5.3E-09 72.9 21.8 139 323-482 292-465 (606)
137 PLN02620 indole-3-acetic acid- 98.1 0.0013 2.8E-08 67.7 23.6 138 323-481 303-470 (612)
138 PF14535 AMP-binding_C_2: AMP- 96.4 0.009 1.9E-07 46.2 5.7 46 466-512 1-47 (96)
139 COG1541 PaaK Coenzyme F390 syn 94.3 0.39 8.5E-06 47.6 10.3 87 78-166 109-197 (438)
140 TIGR03335 F390_ftsA coenzyme F 86.6 7 0.00015 39.9 11.1 81 78-162 105-187 (445)
141 TIGR02155 PA_CoA_ligase phenyl 86.2 6.4 0.00014 39.8 10.6 86 78-165 94-181 (422)
142 PRK02261 methylaspartate mutas 75.7 18 0.00039 29.9 7.8 55 253-307 6-62 (137)
143 TIGR02370 pyl_corrinoid methyl 69.1 83 0.0018 27.9 13.7 91 251-342 85-183 (197)
144 PRK06187 long-chain-fatty-acid 66.8 38 0.00083 35.0 9.9 84 78-166 186-270 (521)
145 PRK07656 long-chain-fatty-acid 60.1 43 0.00093 34.6 8.8 84 78-166 185-270 (513)
146 PF00501 AMP-binding: AMP-bind 58.1 59 0.0013 32.5 9.1 90 206-305 8-99 (417)
147 PRK08315 AMP-binding domain pr 56.0 65 0.0014 33.8 9.4 84 77-164 217-302 (559)
148 KOG1177 Long chain fatty acid 56.0 1E+02 0.0022 31.3 9.5 107 225-333 75-198 (596)
149 cd02069 methionine_synthase_B1 55.3 1.1E+02 0.0023 27.6 9.2 90 251-343 89-186 (213)
150 TIGR03089 conserved hypothetic 54.5 32 0.00069 31.3 5.8 52 99-152 173-226 (227)
151 TIGR03590 PseG pseudaminic aci 53.9 1.3E+02 0.0029 28.3 10.1 96 75-178 8-112 (279)
152 PRK07529 AMP-binding domain pr 53.0 74 0.0016 34.1 9.3 98 206-307 38-137 (632)
153 PRK06334 long chain fatty acid 52.2 1.8E+02 0.004 30.4 11.9 85 77-165 201-287 (539)
154 cd02070 corrinoid_protein_B12- 51.4 1.8E+02 0.0038 25.9 13.4 89 251-340 83-179 (201)
155 PTZ00342 acyl-CoA synthetase; 51.4 2.5E+02 0.0054 31.0 12.9 119 206-333 74-208 (746)
156 PRK09274 peptide synthase; Pro 51.1 1.2E+02 0.0027 31.6 10.5 100 206-307 19-121 (552)
157 PF09580 Spore_YhcN_YlaJ: Spor 49.0 45 0.00097 28.9 5.7 48 471-524 77-124 (177)
158 PRK12583 acyl-CoA synthetase; 48.7 1.1E+02 0.0025 31.9 9.8 83 78-164 220-304 (558)
159 PLN03052 acetate--CoA ligase; 48.6 1.3E+02 0.0027 33.1 10.2 100 206-308 188-289 (728)
160 TIGR01733 AA-adenyl-dom amino 48.1 1.4E+02 0.0031 29.5 10.0 86 77-166 138-226 (408)
161 PRK06188 acyl-CoA synthetase; 47.1 1.3E+02 0.0027 31.3 9.8 83 78-165 187-269 (524)
162 TIGR02898 spore_YhcN_YlaJ spor 46.2 54 0.0012 27.8 5.4 48 472-524 57-105 (158)
163 PRK07788 acyl-CoA synthetase; 44.3 1.4E+02 0.0031 31.2 9.7 85 227-313 74-160 (549)
164 PRK06839 acyl-CoA synthetase; 43.4 2.1E+02 0.0045 29.3 10.7 97 206-313 15-114 (496)
165 cd01445 TST_Repeats Thiosulfat 43.1 67 0.0014 26.5 5.5 41 89-130 81-124 (138)
166 PLN03051 acyl-activating enzym 43.1 1.5E+02 0.0033 30.5 9.5 84 78-165 138-222 (499)
167 COG0399 WecE Predicted pyridox 43.0 1.1E+02 0.0023 30.3 7.6 65 88-157 59-128 (374)
168 PRK00174 acetyl-CoA synthetase 43.0 1.4E+02 0.003 32.1 9.5 98 206-308 80-179 (637)
169 TIGR01923 menE O-succinylbenzo 42.5 93 0.002 31.2 7.7 81 78-165 130-211 (436)
170 TIGR03098 ligase_PEP_1 acyl-Co 41.8 1.6E+02 0.0034 30.4 9.5 85 77-166 179-264 (515)
171 TIGR02188 Ac_CoA_lig_AcsA acet 41.7 1.7E+02 0.0037 31.3 9.9 98 206-308 70-169 (625)
172 COG4821 Uncharacterized protei 41.3 97 0.0021 27.3 6.1 55 84-159 85-139 (243)
173 PRK13295 cyclohexanecarboxylat 41.0 1.7E+02 0.0037 30.6 9.6 97 206-307 37-135 (547)
174 PRK08316 acyl-CoA synthetase; 40.8 2.6E+02 0.0056 28.8 11.0 87 226-314 35-123 (523)
175 PRK05677 long-chain-fatty-acid 40.8 1.8E+02 0.0039 30.5 9.8 83 227-311 49-134 (562)
176 COG5012 Predicted cobalamin bi 40.7 2.3E+02 0.0049 25.6 8.5 86 259-344 114-205 (227)
177 PRK03584 acetoacetyl-CoA synth 40.6 2.3E+02 0.0051 30.4 10.8 96 207-308 98-195 (655)
178 PRK05850 acyl-CoA synthetase; 40.5 2.1E+02 0.0045 30.2 10.3 104 206-313 14-123 (578)
179 PLN02860 o-succinylbenzoate-Co 40.1 3.1E+02 0.0067 28.8 11.5 84 78-166 191-275 (563)
180 PF01041 DegT_DnrJ_EryC1: DegT 40.1 64 0.0014 31.8 5.9 65 88-157 50-119 (363)
181 PRK08751 putative long-chain f 40.1 1.4E+02 0.003 31.4 8.8 84 227-312 50-136 (560)
182 PLN02565 cysteine synthase 39.8 1.9E+02 0.004 28.0 8.8 61 99-159 60-121 (322)
183 PLN02574 4-coumarate--CoA liga 39.4 2.5E+02 0.0054 29.5 10.6 99 206-313 52-153 (560)
184 PRK08008 caiC putative crotono 39.4 3.4E+02 0.0073 28.0 11.5 100 206-311 20-121 (517)
185 PLN02736 long-chain acyl-CoA s 39.4 3E+02 0.0065 29.6 11.4 101 227-332 78-180 (651)
186 PLN03102 acyl-activating enzym 39.3 1.6E+02 0.0034 31.2 9.1 83 227-311 39-123 (579)
187 PRK04319 acetyl-CoA synthetase 39.1 1.6E+02 0.0035 31.0 9.1 85 78-166 224-310 (570)
188 COG0318 CaiC Acyl-CoA syntheta 39.0 4.2E+02 0.0092 27.7 12.1 94 206-308 24-119 (534)
189 TIGR02379 ECA_wecE TDP-4-keto- 38.9 1.1E+02 0.0024 30.4 7.3 62 91-157 59-125 (376)
190 PLN02246 4-coumarate--CoA liga 38.8 1.3E+02 0.0027 31.5 8.2 88 77-165 197-286 (537)
191 TIGR01501 MthylAspMutase methy 38.6 1.5E+02 0.0033 24.4 6.8 94 261-360 13-118 (134)
192 PLN02654 acetate-CoA ligase 38.3 1.2E+02 0.0027 32.8 8.2 80 227-308 120-201 (666)
193 PF00403 HMA: Heavy-metal-asso 38.3 1.3E+02 0.0027 20.4 6.0 46 471-524 13-58 (62)
194 PRK05605 long-chain-fatty-acid 38.0 1.9E+02 0.004 30.5 9.4 85 227-313 57-143 (573)
195 PRK05857 acyl-CoA synthetase; 37.9 2.3E+02 0.0051 29.5 10.1 95 206-309 27-123 (540)
196 KOG1179 Very long-chain acyl-C 37.7 4.4E+02 0.0095 27.7 11.0 80 86-166 265-346 (649)
197 PRK13388 acyl-CoA synthetase; 36.9 2.5E+02 0.0053 29.4 10.0 83 227-311 26-111 (540)
198 PF00818 Ice_nucleation: Ice n 36.7 15 0.00033 17.6 0.4 9 356-364 1-9 (16)
199 PRK11070 ssDNA exonuclease Rec 36.4 3.6E+02 0.0078 28.6 10.8 95 78-179 49-161 (575)
200 PRK07798 acyl-CoA synthetase; 36.3 2.7E+02 0.0059 28.7 10.3 85 227-313 28-114 (533)
201 PRK13237 tyrosine phenol-lyase 36.3 2.5E+02 0.0053 28.7 9.1 70 77-151 76-174 (460)
202 PRK03640 O-succinylbenzoic aci 36.0 1.9E+02 0.0042 29.5 9.0 84 78-166 160-244 (483)
203 PRK11706 TDP-4-oxo-6-deoxy-D-g 35.8 1.4E+02 0.0031 29.5 7.6 55 99-157 66-125 (375)
204 COG4451 RbcS Ribulose bisphosp 35.5 1.6E+02 0.0034 23.5 5.9 41 470-512 69-109 (127)
205 PRK06155 crotonobetaine/carnit 35.1 2.4E+02 0.0052 29.5 9.6 86 227-314 46-133 (542)
206 COG1167 ARO8 Transcriptional r 34.7 1E+02 0.0023 31.5 6.5 56 248-308 176-235 (459)
207 PRK13383 acyl-CoA synthetase; 34.5 2E+02 0.0044 29.7 8.9 85 227-313 60-146 (516)
208 TIGR01139 cysK cysteine syntha 34.4 2.5E+02 0.0055 26.7 8.8 61 99-160 51-112 (298)
209 TIGR02316 propion_prpE propion 34.3 1.5E+02 0.0034 31.6 8.2 97 206-307 65-163 (628)
210 PRK08279 long-chain-acyl-CoA s 34.3 3.2E+02 0.007 28.9 10.6 97 206-313 50-148 (600)
211 PRK07638 acyl-CoA synthetase; 34.2 2.6E+02 0.0056 28.6 9.6 84 78-166 162-246 (487)
212 PLN02330 4-coumarate--CoA liga 34.1 2.5E+02 0.0053 29.4 9.5 97 206-311 41-139 (546)
213 cd04910 ACT_AK-Ectoine_1 ACT d 33.8 93 0.002 22.3 4.2 51 289-353 19-69 (71)
214 PRK07769 long-chain-fatty-acid 33.4 3.7E+02 0.008 28.7 10.9 83 227-311 55-141 (631)
215 PLN02387 long-chain-fatty-acid 33.2 4.1E+02 0.0089 28.9 11.2 102 227-333 106-209 (696)
216 PF06543 Lac_bphage_repr: Lact 33.0 34 0.00074 22.0 1.6 23 327-349 22-44 (49)
217 PRK07514 malonyl-CoA synthase; 32.5 2.9E+02 0.0063 28.3 9.7 85 227-313 28-114 (504)
218 PLN02614 long-chain acyl-CoA s 32.5 2.6E+02 0.0057 30.3 9.5 85 227-313 79-165 (666)
219 PF01037 AsnC_trans_reg: AsnC 32.4 1.2E+02 0.0026 21.3 4.9 46 469-524 10-55 (74)
220 KOG1250 Threonine/serine dehyd 32.2 1.3E+02 0.0028 29.7 6.1 53 109-161 118-170 (457)
221 PRK08308 acyl-CoA synthetase; 32.2 2.3E+02 0.0051 28.2 8.7 84 77-165 119-204 (414)
222 PRK11761 cysM cysteine synthas 31.5 2.5E+02 0.0055 26.7 8.2 89 67-159 28-117 (296)
223 PRK12476 putative fatty-acid-- 31.4 2.7E+02 0.0058 29.7 9.4 102 207-312 48-155 (612)
224 cd07050 BMC_EutL_repeat2 ethan 31.4 68 0.0015 23.4 3.1 39 92-130 3-41 (87)
225 PRK08633 2-acyl-glycerophospho 30.9 3.7E+02 0.0079 31.3 11.1 100 205-314 627-727 (1146)
226 PRK08314 long-chain-fatty-acid 30.7 2.7E+02 0.0059 29.0 9.2 86 227-314 35-123 (546)
227 TIGR01217 ac_ac_CoA_syn acetoa 30.7 3.8E+02 0.0083 28.9 10.4 79 227-307 114-194 (652)
228 PTZ00237 acetyl-CoA synthetase 30.4 2.4E+02 0.0053 30.3 8.9 80 226-307 91-172 (647)
229 PRK09088 acyl-CoA synthetase; 30.4 3.7E+02 0.0081 27.4 10.0 93 206-307 8-102 (488)
230 PF08734 GYD: GYD domain; Int 30.3 2E+02 0.0044 21.7 5.9 66 81-147 15-90 (91)
231 PRK12492 long-chain-fatty-acid 30.1 2.2E+02 0.0047 29.9 8.4 81 227-309 49-132 (562)
232 PLN02556 cysteine synthase/L-3 30.0 2.6E+02 0.0056 27.7 8.2 61 99-159 104-165 (368)
233 PF11142 DUF2917: Protein of u 29.9 1.9E+02 0.0042 20.1 5.3 34 408-456 25-58 (63)
234 COG0365 Acs Acyl-coenzyme A sy 29.8 2.5E+02 0.0055 29.3 8.3 98 210-313 26-126 (528)
235 TIGR03443 alpha_am_amid L-amin 29.6 2.5E+02 0.0055 33.5 9.6 99 206-306 249-349 (1389)
236 PF01436 NHL: NHL repeat; Int 29.4 1E+02 0.0022 17.2 3.2 18 446-463 9-26 (28)
237 PRK07008 long-chain-fatty-acid 29.4 1.7E+02 0.0038 30.5 7.4 86 78-165 195-281 (539)
238 PRK13391 acyl-CoA synthetase; 29.3 5.6E+02 0.012 26.3 11.2 98 206-312 10-109 (511)
239 PF00101 RuBisCO_small: Ribulo 29.2 1.7E+02 0.0036 22.7 5.2 37 471-509 62-98 (99)
240 TIGR01136 cysKM cysteine synth 29.1 3.2E+02 0.007 26.0 8.6 61 99-160 52-113 (299)
241 KOG1176 Acyl-CoA synthetase [L 28.9 3.5E+02 0.0077 28.4 9.2 90 225-316 43-136 (537)
242 PRK07470 acyl-CoA synthetase; 28.8 4.8E+02 0.01 27.0 10.6 86 78-165 182-268 (528)
243 PRK10524 prpE propionyl-CoA sy 28.3 2.3E+02 0.0051 30.2 8.3 97 206-307 66-164 (629)
244 PRK10696 tRNA 2-thiocytidine b 28.1 4.5E+02 0.0098 24.3 9.2 69 88-157 13-93 (258)
245 PRK06087 short chain acyl-CoA 27.7 3.5E+02 0.0077 28.1 9.4 78 227-306 49-128 (547)
246 PRK12406 long-chain-fatty-acid 27.3 3.3E+02 0.007 28.1 9.0 84 228-313 12-97 (509)
247 PRK08162 acyl-CoA synthetase; 27.3 2.9E+02 0.0063 28.8 8.7 85 227-313 43-129 (545)
248 TIGR02262 benz_CoA_lig benzoat 27.2 3.1E+02 0.0067 28.2 8.8 85 77-164 179-265 (508)
249 cd01449 TST_Repeat_2 Thiosulfa 26.8 1.1E+02 0.0025 24.0 4.3 39 90-129 65-103 (118)
250 cd02071 MM_CoA_mut_B12_BD meth 26.7 2.2E+02 0.0049 22.7 6.0 84 261-347 11-101 (122)
251 PRK13390 acyl-CoA synthetase; 26.6 5.5E+02 0.012 26.3 10.5 93 206-307 10-104 (501)
252 PRK06164 acyl-CoA synthetase; 26.5 3.2E+02 0.0069 28.4 8.8 84 78-166 200-284 (540)
253 COG0031 CysK Cysteine synthase 26.2 2.9E+02 0.0062 26.4 7.3 60 99-159 56-116 (300)
254 COG2351 Transthyretin-like pro 25.7 1E+02 0.0022 24.6 3.4 17 380-396 18-34 (124)
255 PRK09162 hypoxanthine-guanine 25.5 2E+02 0.0043 25.1 5.8 48 76-125 14-61 (181)
256 PRK05852 acyl-CoA synthetase; 25.4 5.3E+02 0.012 26.7 10.2 85 78-166 195-282 (534)
257 PRK13382 acyl-CoA synthetase; 25.3 4.5E+02 0.0098 27.3 9.7 82 227-310 68-151 (537)
258 TIGR03588 PseC UDP-4-keto-6-de 25.2 3.2E+02 0.0069 27.0 8.1 64 89-156 55-126 (380)
259 PF10411 DsbC_N: Disulfide bon 25.2 67 0.0014 21.8 2.2 19 440-458 32-50 (57)
260 cd01519 RHOD_HSP67B2 Member of 25.1 1.5E+02 0.0032 22.7 4.6 51 78-129 37-91 (106)
261 PRK11658 UDP-4-amino-4-deoxy-L 25.0 2.5E+02 0.0055 27.8 7.3 63 89-156 59-126 (379)
262 PLN03013 cysteine synthase 25.0 3.6E+02 0.0078 27.3 8.2 62 99-160 168-230 (429)
263 PLN00011 cysteine synthase 24.7 4.5E+02 0.0096 25.4 8.7 58 101-159 65-123 (323)
264 PRK08276 long-chain-fatty-acid 24.7 4.9E+02 0.011 26.7 9.7 84 228-313 12-97 (502)
265 PRK10252 entF enterobactin syn 24.7 4E+02 0.0087 31.5 10.0 85 77-165 616-703 (1296)
266 PRK07059 Long-chain-fatty-acid 24.4 3.7E+02 0.0081 28.1 8.9 82 227-310 48-131 (557)
267 PRK15407 lipopolysaccharide bi 24.1 2.8E+02 0.0061 28.2 7.5 56 99-158 106-166 (438)
268 COG4009 Uncharacterized protei 23.9 2.9E+02 0.0064 20.1 5.3 67 77-155 8-77 (88)
269 PRK07867 acyl-CoA synthetase; 23.4 4.1E+02 0.0088 27.7 8.8 83 227-311 28-113 (529)
270 PRK05620 long-chain-fatty-acid 23.4 4.3E+02 0.0093 27.8 9.1 85 78-164 200-285 (576)
271 PRK08043 bifunctional acyl-[ac 23.4 4.4E+02 0.0096 28.8 9.4 82 77-162 383-466 (718)
272 cd03466 Nitrogenase_NifN_2 Nit 23.0 5.6E+02 0.012 26.0 9.4 56 103-159 299-358 (429)
273 PRK08974 long-chain-fatty-acid 22.8 3.5E+02 0.0077 28.3 8.4 81 227-309 48-131 (560)
274 COG2236 Predicted phosphoribos 22.8 1.4E+02 0.0031 26.3 4.3 32 77-109 5-36 (192)
275 TIGR01734 D-ala-DACP-lig D-ala 22.6 4.9E+02 0.011 26.6 9.3 84 77-164 159-245 (502)
276 PTZ00397 macrophage migration 22.6 2.1E+02 0.0045 22.7 5.0 49 67-115 57-105 (116)
277 cd01974 Nitrogenase_MoFe_beta 22.2 5.2E+02 0.011 26.2 9.0 46 103-149 302-351 (435)
278 TIGR01138 cysM cysteine syntha 22.1 5.6E+02 0.012 24.2 8.7 60 99-159 53-113 (290)
279 PF01060 DUF290: Transthyretin 22.0 3E+02 0.0065 20.1 5.4 15 383-397 8-22 (80)
280 PRK15423 hypoxanthine phosphor 21.9 2.8E+02 0.0061 24.1 6.0 22 78-99 8-29 (178)
281 PLN02479 acetate-CoA ligase 21.7 5.6E+02 0.012 26.9 9.6 83 227-311 45-129 (567)
282 PRK11493 sseA 3-mercaptopyruva 21.6 1.3E+02 0.0029 28.3 4.3 52 78-130 201-257 (281)
283 cd06448 L-Ser-dehyd Serine deh 21.6 2E+02 0.0043 27.7 5.6 79 78-160 28-106 (316)
284 PRK06178 acyl-CoA synthetase; 21.5 5E+02 0.011 27.2 9.2 86 227-314 58-145 (567)
285 PF01297 TroA: Periplasmic sol 21.5 3.3E+02 0.0072 25.1 6.9 96 81-178 127-231 (256)
286 PRK10595 SOS cell division inh 21.4 2.6E+02 0.0057 23.9 5.5 55 91-146 69-126 (164)
287 PRK10946 entE enterobactin syn 21.3 5E+02 0.011 27.0 9.0 84 77-165 200-286 (536)
288 PLN02861 long-chain-fatty-acid 21.2 6.3E+02 0.014 27.3 9.9 86 227-314 77-164 (660)
289 PRK06018 putative acyl-CoA syn 21.0 4.3E+02 0.0093 27.5 8.5 85 227-313 39-125 (542)
290 PF14552 Tautomerase_2: Tautom 20.9 1.2E+02 0.0026 22.5 3.0 49 67-115 28-76 (82)
291 PLN02430 long-chain-fatty-acid 20.7 1E+03 0.022 25.6 11.4 101 228-332 77-179 (660)
292 cd00307 RuBisCO_small_like Rib 20.5 3.4E+02 0.0073 20.3 5.2 37 471-509 48-84 (84)
293 TIGR00715 precor6x_red precorr 20.4 4.4E+02 0.0096 24.5 7.3 73 104-179 150-233 (256)
294 TIGR02275 DHB_AMP_lig 2,3-dihy 20.2 5.7E+02 0.012 26.4 9.2 84 77-165 201-287 (527)
295 PRK10717 cysteine synthase A; 20.2 5.3E+02 0.011 24.9 8.3 60 99-159 58-118 (330)
296 PRK06381 threonine synthase; V 20.0 2.7E+02 0.0058 26.8 6.2 55 105-160 64-118 (319)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-82 Score=635.17 Aligned_cols=451 Identities=43% Similarity=0.682 Sum_probs=395.7
Q ss_pred ceEEEeCCC-CceeCHHHHHHHHHHHHHHHHHhcC--CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHH
Q 041055 67 RVALIDSAT-HERVTYAQLHRSIRSLASGLYHALG--VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEI 143 (526)
Q Consensus 67 ~~a~~~~~~-~~~~Ty~el~~~~~~lA~~L~~~~g--l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 143 (526)
.++++.... ++.+||+|+++++.|+|..|.+ +| +++||+|++++||+++++.+++||+.+|+++.++||.+.+.++
T Consensus 33 ~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei 111 (537)
T KOG1176|consen 33 NTSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEI 111 (537)
T ss_pred cceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHH
Confidence 366665432 6999999999999999999997 66 7899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEEcchhHHHhhcC----CCCEEEEcCCCCCCCcch-------HHHHhhhcCCCCCCCCCCCCCCCEEE
Q 041055 144 VKQVRDSGAKLIISASEELQKLTKV----NVPIIVTSRDQSNNKSVS-------VEELIECCDAADELPGCQLTQDDTAA 212 (526)
Q Consensus 144 ~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~ 212 (526)
.++++.++++++|++.+..+++... ..+++++........... +..+.....+ .. ......+|+++
T Consensus 112 ~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~dd~~~ 188 (537)
T KOG1176|consen 112 AKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP--DG-IRPVSEDDTAA 188 (537)
T ss_pred HHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC--cc-cccCCCCCeEE
Confidence 9999999999999999988877532 255666654311111111 2221111111 11 23556799999
Q ss_pred EEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHH
Q 041055 213 ILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMI 292 (526)
Q Consensus 213 i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~ 292 (526)
++|||||||.||||++||+++..+.......+. ....++.++.+|++|.+|+...+...+..|+++++...|+++.++
T Consensus 189 il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~--~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~ 266 (537)
T KOG1176|consen 189 ILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWE--LTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFL 266 (537)
T ss_pred EecCCCCCCCCceEEEecHHHHHHHHHhhhccc--CCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHH
Confidence 999999999999999999999887665554444 456899999999999999977666688888888888899999999
Q ss_pred HHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccC
Q 041055 293 EAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVS 371 (526)
Q Consensus 293 ~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~ 371 (526)
+.+++|++|+++++|+++..|++.+ ....+++++|.+.+||+++++++.+++++++|+..+.++|||||+++.++.+..
T Consensus 267 ~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~ 346 (537)
T KOG1176|consen 267 DLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDW 346 (537)
T ss_pred HHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCC
Confidence 9999999999999999999999984 667999999999999999999999999999988999999999999988887665
Q ss_pred cccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCc
Q 041055 372 PKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGF 451 (526)
Q Consensus 372 ~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~ 451 (526)
... .+++++|.+++++..++.+ ++|+.+++++.||||++|+++++||++||++|++.|+++|||+|||+|++|+||+
T Consensus 347 ~~e--~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~ 423 (537)
T KOG1176|consen 347 GPE--RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGY 423 (537)
T ss_pred Ccc--CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCe
Confidence 554 3599999999988777777 8899999999999999999999999999999999998889999999999999999
Q ss_pred EEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 452 LYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 452 l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
|+|.||+||+||.+|++|+|.|||++|.+||.|.|||||+++|+..||.|+||||+++|...++++|++||++||
T Consensus 424 l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~~~v~k~l 498 (537)
T KOG1176|consen 424 LYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDIIEYVRKKL 498 (537)
T ss_pred EEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=8.2e-77 Score=552.67 Aligned_cols=472 Identities=26% Similarity=0.387 Sum_probs=411.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
-++.+++... ++.-| |+.|.+....+.++||+|+.+.++.+|.+|.+ +|+++||||+++.||+.+|+..+|||+++
T Consensus 50 ~Tigq~l~~~-t~~v~--dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 50 ETIGQLLETT-TERVP--DKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-LGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred ccHHHHHHHH-hhccC--cceEEEEeeccchhhHHHHHHHHHHHHhhHHh-hcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 5788888877 66666 68887766678889999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHH------------Hhhc--------CCCC----EEEEcCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQ------------KLTK--------VNVP----IIVTSRDQSNNK 183 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------------~~~~--------~~~~----~i~~~~~~~~~~ 183 (526)
|.+.+++||.+..+++++.|++.+++++|+.+.... .+.. ..+| ++..+++....+
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~G 205 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLPG 205 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCCC
Confidence 999999999999999999999999999998764321 1111 1122 344444545555
Q ss_pred cchHHHHhhhcCCCC----CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCC
Q 041055 184 SVSVEELIECCDAAD----ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIP 259 (526)
Q Consensus 184 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p 259 (526)
...+.+++....... ..-.....|++++-|.|||||||.|||+.+||.+++++.......++ ++..++++...|
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g--~~e~~~i~~~~P 283 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAG--YNEKHRICIPNP 283 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhC--cCcceEEEecCc
Confidence 555666554332211 11112457899999999999999999999999999999988877776 667889999999
Q ss_pred hhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCC
Q 041055 260 MFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLS 337 (526)
Q Consensus 260 ~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~ 337 (526)
++|.+|.....++++..|++++++ +.|++...++.|+++++|.++++|+++..|++. .....+++++|..+.||+++|
T Consensus 284 l~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s 363 (596)
T KOG1177|consen 284 LYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVS 363 (596)
T ss_pred hHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCC
Confidence 999999889999999999999996 679999999999999999999999999999988 557899999999999999999
Q ss_pred HHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecccc
Q 041055 338 KELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTI 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~ 417 (526)
+++.+.+.....=..+...||+||++.+.++............++|...++.+..++| +.|..+|.|..||||++|.+.
T Consensus 364 ~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~t 442 (596)
T KOG1177|consen 364 PELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYST 442 (596)
T ss_pred HHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechh
Confidence 9999999987632358899999999987777655544444468999999999999999 889999999999999999999
Q ss_pred ccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCC
Q 041055 418 MRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEA 497 (526)
Q Consensus 418 ~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~ 497 (526)
+.|||++++.|.++...|.||+|||+|.+|++|.++|+||++|+|+.+|++|+|.|||+.|.+||.|.++.|||++|+..
T Consensus 443 Ml~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~ 522 (596)
T KOG1177|consen 443 MLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDERL 522 (596)
T ss_pred heeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCCCCC--CCHHHHHHHHHhcC
Q 041055 498 GQIPMAYVVRAAGSQ--LTEDQVMQFVTSQL 526 (526)
Q Consensus 498 ~~~~~a~vv~~~~~~--~~~~~l~~~l~~~l 526 (526)
||.++|+|.++.+.. .++++|+.+||.+|
T Consensus 523 GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~kl 553 (596)
T KOG1177|consen 523 GEEVCACVRLQEGAEGKTTAETLKAMCKGKL 553 (596)
T ss_pred cceEEEEEEeeccccccccHHHHHHHHhccc
Confidence 999999999998765 58999999999874
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=7.7e-76 Score=583.40 Aligned_cols=459 Identities=29% Similarity=0.421 Sum_probs=383.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCC---CceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSAT---HERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
+|+...++++...... .++.|++..++ .+.+||+||++.+.++|+.|++..|+ +||||++++|+.+|.++++|||
T Consensus 8 lN~~~n~~dr~~~~~~-~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~ 85 (528)
T COG0365 8 LNLALNALDRHLEADR-PDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLAT 85 (528)
T ss_pred eechhhhhhhhhhccC-CCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHH
Confidence 5655444444222111 36888886533 27899999999999999999875678 9999999999999999999999
Q ss_pred HHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCC---------CEEEEcCCCCCCCcchHHHHhhhcC
Q 041055 125 FSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNV---------PIIVTSRDQSNNKSVSVEELIECCD 195 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~~~ 195 (526)
+++|++++|+.+.++++.+++++++++++++|+++....+.+.... .++++.... ..+.+..+...
T Consensus 86 ~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-----~~~~~~~~~~~ 160 (528)
T COG0365 86 ARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-----LWYDEAVEKAS 160 (528)
T ss_pred HHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-----ccHHHHhhccC
Confidence 9999999999999999999999999999999998876554332111 133332221 44444443322
Q ss_pred CCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHh-hhhcccCCCCcEEEEeCChhHHHHHHHHHHhhc
Q 041055 196 AADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLR-WTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLF 274 (526)
Q Consensus 196 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~-~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l 274 (526)
. ..+....+.+|+++++|||||||+||||+++|.+++....... ..+. +.++|++++..++.|++|..+.++.++
T Consensus 161 ~--~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~--~~~~Dv~w~~ad~GW~~g~~~~v~~pL 236 (528)
T COG0365 161 E--KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGD--LLPGDRFWNSSDPGWIYGLWYSVFSPL 236 (528)
T ss_pred C--CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhC--CCCCCEEEeCCCchhhhCchHHHHHHH
Confidence 2 2222247889999999999999999999999998776655444 4444 559999999999999999988899999
Q ss_pred ccCcEEEEecC--C-CHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCC
Q 041055 275 CCGVTIVVMQR--F-DLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPW 350 (526)
Q Consensus 275 ~~G~~~v~~~~--~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~ 350 (526)
..|+++++... + +++.+++.|+++++|.+++.|+.++.|++.. .+.+++++||.+.+.|||++++..+++.+.+ +
T Consensus 237 ~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g 315 (528)
T COG0365 237 ASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-G 315 (528)
T ss_pred hcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-C
Confidence 99999999853 2 4999999999999999999999999999984 5678999999999999999999999999999 6
Q ss_pred CceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecc--ccccccCCCHHHH
Q 041055 351 VELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSP--TIMRGYFGNEEAT 428 (526)
Q Consensus 351 ~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~--~~~~gy~~~~~~t 428 (526)
++|.+.||+||++++.....+ . . .+++.|+|+||+++.++|++ |+++++|+ |+|+++.| +++++||+||+.+
T Consensus 316 ~~i~d~~gqTEtg~~~~~~~~--~-~-~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~ 389 (528)
T COG0365 316 VWILDIYGQTETGMGFIAGRP--P-V-KNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWNDPERY 389 (528)
T ss_pred CCEeccccccccCccccCCCC--C-c-CCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhCCHHHH
Confidence 999999999999955444333 1 1 25666999999999999966 99999999 99999985 9999999999999
Q ss_pred hcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeC
Q 041055 429 AAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 429 ~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~ 508 (526)
.+++.+. ||.|||.+++|+||++||+||.||+||+.|+||.|.|||++|.+||.|.||+||++||+..|+.++|||+++
T Consensus 390 ~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~ 468 (528)
T COG0365 390 KEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLA 468 (528)
T ss_pred HHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEec
Confidence 9998555 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC--HHHHHHHHHhc
Q 041055 509 AGSQLT--EDQVMQFVTSQ 525 (526)
Q Consensus 509 ~~~~~~--~~~l~~~l~~~ 525 (526)
+|...+ +++|+++++++
T Consensus 469 ~g~~~~~L~~ei~~~vr~~ 487 (528)
T COG0365 469 AGVEPNELAEEIRRHVARN 487 (528)
T ss_pred CCCChHHHHHHHHHHHHhc
Confidence 987655 24566666544
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9e-74 Score=592.64 Aligned_cols=471 Identities=36% Similarity=0.561 Sum_probs=396.1
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..+ +++|+++.+...++||+||.++++++|.+|.+ .|+++||+|+|+++|++++++++|||+++
T Consensus 11 ~~~~~~l~~~-a~~~~--~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 11 LTLASLLERA-ARRNP--DRPALIFLGRGGRLTYRELDRRANRLAAALQA-LGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred ccHHHHHHHH-HHhCC--CceEEEEcCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 6788888877 66677 79999985433359999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhh---cCC-C-CEEEEcCCCCCCCc-chHHHHhhhcCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLT---KVN-V-PIIVTSRDQSNNKS-VSVEELIECCDAADELP 201 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~---~~~-~-~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 201 (526)
|++++|+||.+..+++.++++++++++++++.+....+. ... . ..+..... ..... ..+.+....... ....
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 164 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGD-ADDRLPITLEALAAEGPG-PDAD 164 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEeccc-ccccccccHHHHhhccCC-cccc
Confidence 999999999999999999999999999999987333322 111 1 11221111 11111 233333211111 1111
Q ss_pred CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEE
Q 041055 202 GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIV 281 (526)
Q Consensus 202 ~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 281 (526)
....+++++++++|||||||.||||++||+|+..+.......+...+.+.|++++.+|++|.+|+...++.++..|++++
T Consensus 165 ~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v 244 (534)
T COG0318 165 ARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLV 244 (534)
T ss_pred cCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEE
Confidence 11257899999999999999999999999999988777766655225788899999999999999777888899999999
Q ss_pred Eec--CCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCC-ceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 282 VMQ--RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTS-LRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 282 ~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~-lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
+.+ .|+++.++..+.++++|++.++|+++..|+.. .....++++ +|.+++||+++++++.++++++|+...+.+.|
T Consensus 245 ~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~Y 324 (534)
T COG0318 245 LLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGY 324 (534)
T ss_pred eCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEee
Confidence 998 69999999999999999999999999999888 334445555 99999999999999999999999667899999
Q ss_pred ccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCe
Q 041055 358 GLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGW 437 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~ 437 (526)
|+||++..++...... .....+++|.|+|+++++|+|++++.++| |+.|||+++||+++.|||++|+.|.+.|+.+||
T Consensus 325 G~TE~~~~~~~~~~~~-~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW 402 (534)
T COG0318 325 GLTETSPVVTINPPDD-LLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGW 402 (534)
T ss_pred cccccCceeecCCCch-hhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCe
Confidence 9999997776655443 11236778999999999999988776667 999999999999999999999999999876799
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCC--CCCCH
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAG--SQLTE 515 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~--~~~~~ 515 (526)
|+|||+|++|+||+++|.||.||+|+++|++|+|.|||.++.+||.|.+++|++++|+..||.++|+|+++++ ...++
T Consensus 403 ~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~~~~~~ 482 (534)
T COG0318 403 LRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGDAELTA 482 (534)
T ss_pred eeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 45588
Q ss_pred HHHHHHHHhcC
Q 041055 516 DQVMQFVTSQL 526 (526)
Q Consensus 516 ~~l~~~l~~~l 526 (526)
++|+++|++++
T Consensus 483 ~~i~~~~~~~l 493 (534)
T COG0318 483 EELRAFLRKRL 493 (534)
T ss_pred HHHHHHHHhhh
Confidence 99999999754
No 5
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.5e-71 Score=581.12 Aligned_cols=495 Identities=43% Similarity=0.752 Sum_probs=412.0
Q ss_pred CCCCCCCceeecCCCCCCCCCCCCCCCCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcC
Q 041055 21 SGFDSETGIYHSLIQLGENYRIPTRTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALG 100 (526)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~g 100 (526)
+.|++...++.+.. ++..+|..+.+++.+.+++. + ..+ +++|+++...+..+||+||.+++.++|++|.+++|
T Consensus 16 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~-~-~~~--~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G 88 (560)
T PLN02574 16 FWYSPETGIYSSKH---PPVPLPSDPNLDAVSFIFSH-H-NHN--GDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMG 88 (560)
T ss_pred cccCcCCeeecCCC---CCCCCCCCCCCCHHHHHhcC-c-ccC--CCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhC
Confidence 35666666777654 33444444446666777765 3 344 78999986556689999999999999999985489
Q ss_pred CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCC-
Q 041055 101 VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQ- 179 (526)
Q Consensus 101 l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~- 179 (526)
+++||+|+++++|+++|++++|||+++|++++|++|.++.+++.++++.+++++++++.+....+.....+++.+....
T Consensus 89 ~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (560)
T PLN02574 89 VRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENYD 168 (560)
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999887776655455554443211
Q ss_pred ---CCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhh----hcccCCCCc
Q 041055 180 ---SNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWT----VDVTHAQND 252 (526)
Q Consensus 180 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~----~~~~~~~~~ 252 (526)
.......+.++...... ..+.....++++++++|||||||.||+|+++|+++...+..+... +. .....+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~-~~~~~~ 245 (560)
T PLN02574 169 FDSKRIEFPKFYELIKEDFD--FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYE-YPGSDN 245 (560)
T ss_pred cccCccCcccHHHHhhcCCc--ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccc-cCCCCc
Confidence 01122334433322211 111223467899999999999999999999999998877655421 11 123567
Q ss_pred EEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc--CCCCCCCceEEE
Q 041055 253 IFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK--DSSYLTSLRRVG 330 (526)
Q Consensus 253 ~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~l~~lr~v~ 330 (526)
+++..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++... ...+++++|.++
T Consensus 246 ~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~ 325 (560)
T PLN02574 246 VYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVS 325 (560)
T ss_pred EEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEE
Confidence 889999999999997777788889999999999999999999999999999999999999988732 356788999999
Q ss_pred EecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceE
Q 041055 331 SGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGEL 410 (526)
Q Consensus 331 ~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel 410 (526)
+||+++++++.+++.+.++++.+++.||+||++.+.+........ ...+++|++.++++++|+|+++++++++|+.|||
T Consensus 326 ~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~-~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei 404 (560)
T PLN02574 326 CGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKL-SKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGEL 404 (560)
T ss_pred EecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCcccc-CCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEE
Confidence 999999999999999999889999999999998655432222211 2368999999999999999888999999999999
Q ss_pred EEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEE
Q 041055 411 WLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVI 490 (526)
Q Consensus 411 ~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv 490 (526)
||+|++++.||++|++.+.+.|+.+|||+|||+|++++||++++.||.||+||++|++|+|.|||.+|.+||+|.|++|+
T Consensus 405 ~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~ 484 (560)
T PLN02574 405 WIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVT 484 (560)
T ss_pred EEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEE
Confidence 99999999999999999999998899999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 491 PLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 491 ~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+++++..++.++++|+.+++...+.++++++++++|
T Consensus 485 ~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l 520 (560)
T PLN02574 485 AVPDKECGEIPVAFVVRRQGSTLSQEAVINYVAKQV 520 (560)
T ss_pred ccccCCCCcceEEEEEeCCCCCCCHHHHHHHHHHhc
Confidence 999998899999999998887788899999999875
No 6
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.7e-70 Score=578.92 Aligned_cols=477 Identities=22% Similarity=0.318 Sum_probs=385.2
Q ss_pred CCCCCCCCChhhhhcccCCC-CCCCCCceEEEeCC----CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC
Q 041055 41 RIPTRTDLDTATCVLSRFPH-PDLAESRVALIDSA----THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL 115 (526)
Q Consensus 41 ~~p~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~ 115 (526)
.+..+..+|+...++++.+. ..+ +++|+++.. ..+++||+||.+++.++|++|++ +|+++||+|+++++|++
T Consensus 80 ~wf~g~~~N~~~~~l~~~~~~~~~--~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~pn~~ 156 (666)
T PLN02654 80 EWFKGGKTNICYNCLDRNVEAGNG--DKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-VGVKKGDAVVIYLPMLM 156 (666)
T ss_pred cccCCCEeeHHHHHHHHhhccCCC--CCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCH
Confidence 34445568887766654232 244 799998632 24789999999999999999998 99999999999999999
Q ss_pred chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHH---------h----hc-----CCCCEE-EEc
Q 041055 116 LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQK---------L----TK-----VNVPII-VTS 176 (526)
Q Consensus 116 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~---------~----~~-----~~~~~i-~~~ 176 (526)
++++++|||+++|++++|+++.++.+++.+++++++++++|++...... + .. .....+ ...
T Consensus 157 e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (666)
T PLN02654 157 ELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYE 236 (666)
T ss_pred HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEec
Confidence 9999999999999999999999999999999999999999998753211 0 00 011111 111
Q ss_pred CCCC----CC-----CcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHH-HHHHhhhhcc
Q 041055 177 RDQS----NN-----KSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISI-MQLLRWTVDV 246 (526)
Q Consensus 177 ~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~-~~~~~~~~~~ 246 (526)
.... .. ....+.++.... + ...+.....++++++|+|||||||.||||+++|++++.. .......++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~- 313 (666)
T PLN02654 237 NQLAMKREDTKWQEGRDVWWQDVVPNY-P-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFD- 313 (666)
T ss_pred ccccccccccccccCCcccHHHHhhcC-C-CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcC-
Confidence 1100 00 011122222111 1 111111356799999999999999999999999997643 333444444
Q ss_pred cCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cC
Q 041055 247 THAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KD 319 (526)
Q Consensus 247 ~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~ 319 (526)
+.++|++++..|++|++|..+.++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|++.. ..
T Consensus 314 -~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 392 (666)
T PLN02654 314 -YKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVT 392 (666)
T ss_pred -CCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccc
Confidence 67899999999999999987778899999999999863 57999999999999999999999999999863 23
Q ss_pred CCCCCCceEEEEecCCCCHHHHHHHHHhCCC--CceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCC
Q 041055 320 SSYLTSLRRVGSGAAPLSKELADEFRAKFPW--VELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTE 397 (526)
Q Consensus 320 ~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~--~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~ 397 (526)
..++++||.++++|+++++++.+++.+.++. +++.+.||+||+++......+.. ....++++|+|.+|++++|+| +
T Consensus 393 ~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~-~~~~~gs~G~p~~g~~v~i~d-~ 470 (666)
T PLN02654 393 RHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVD-E 470 (666)
T ss_pred cCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCC-CCCCCCccCCCCCCceEEEEC-C
Confidence 5678999999999999999999999999953 68999999999987665433211 122378999999999999999 5
Q ss_pred CCccCCCCCcceEEEec--cccccccCCCHHHHhcccC--CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHH
Q 041055 398 TRLALPPYQRGELWLKS--PTIMRGYFGNEEATAAAFD--EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAE 473 (526)
Q Consensus 398 ~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~t~~~~~--~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~e 473 (526)
+|++++.++.|||++++ |++++|||+|++.+...+. .+|||+|||+|++|+||+++++||+||+||++|++|+|.|
T Consensus 471 ~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~E 550 (666)
T PLN02654 471 KGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAE 550 (666)
T ss_pred CCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHH
Confidence 67889989999999999 7899999999999887653 2799999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhcC
Q 041055 474 LEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE---DQVMQFVTSQL 526 (526)
Q Consensus 474 IE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~---~~l~~~l~~~l 526 (526)
||++|.+||.|.+++|++++++..|+.++|||+++++...++ ++|+++++++|
T Consensus 551 IE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L 606 (666)
T PLN02654 551 VESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQI 606 (666)
T ss_pred HHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999998876654 36888888765
No 7
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-69 Score=569.39 Aligned_cols=450 Identities=23% Similarity=0.293 Sum_probs=360.9
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCC---CceeCHHHHHHHHHHHHHHHHHh--cCCCCC-----------CEEEEEC
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSAT---HERVTYAQLHRSIRSLASGLYHA--LGVRKG-----------DVVFVLA 111 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~Ty~el~~~~~~lA~~L~~~--~gl~~g-----------d~V~i~~ 111 (526)
-++.+.+.+. ++..+ +++|+++... .+.+||+||.+++.++|++|.+. +|+++| |+|+|++
T Consensus 61 ~~l~~~l~~~-~~~~p--~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~ 137 (746)
T PTZ00342 61 KHIMKLLLEK-YKLNN--NKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYG 137 (746)
T ss_pred chHHHHHHHH-HhhcC--CceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEc
Confidence 5788888887 66666 7999986422 36899999999999999999861 499998 9999999
Q ss_pred CCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC--C---CC-EEEEcCCCCC----
Q 041055 112 PNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV--N---VP-IIVTSRDQSN---- 181 (526)
Q Consensus 112 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~---~~-~i~~~~~~~~---- 181 (526)
+|+++|+++++||+++|++.||+++.++.+++.++|+++++++++++.+..+.+... . ++ +++++.....
T Consensus 138 ~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~ 217 (746)
T PTZ00342 138 SNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEIN 217 (746)
T ss_pred CCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCcccccc
Confidence 999999999999999999999999999999999999999999999987776665421 2 22 4444431100
Q ss_pred --------------CCc-------------------------------chHHHHhhhcC---------------CCCCCC
Q 041055 182 --------------NKS-------------------------------VSVEELIECCD---------------AADELP 201 (526)
Q Consensus 182 --------------~~~-------------------------------~~~~~~~~~~~---------------~~~~~~ 201 (526)
.+. .++.++..... .....+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (746)
T PTZ00342 218 INKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYK 297 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCC
Confidence 000 00111110000 001111
Q ss_pred CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEE
Q 041055 202 GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIV 281 (526)
Q Consensus 202 ~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 281 (526)
.....++++++|+|||||||.||||++||+|+++.+............+.+++++.+|++|++++ ...+.++..|++++
T Consensus 298 ~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~-~~~~~~l~~G~~i~ 376 (746)
T PTZ00342 298 IQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYER-VIAYLSFMLGGTIN 376 (746)
T ss_pred CCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHH-HHHHHHHHcCCEEE
Confidence 22456799999999999999999999999999988765443211112356899999999999999 45667889999999
Q ss_pred EecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-------c--CC--------------------------------
Q 041055 282 VMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-------K--DS-------------------------------- 320 (526)
Q Consensus 282 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------~--~~-------------------------------- 320 (526)
+.+. ++..+++.|+++++|+++++|.++..+.+.. . +.
T Consensus 377 ~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ki 455 (746)
T PTZ00342 377 IWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKI 455 (746)
T ss_pred EeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHH
Confidence 8865 8999999999999999999999999987520 0 00
Q ss_pred --CCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccC-CCcEEEEEeCC
Q 041055 321 --SYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALS-PTFYAKVVDTE 397 (526)
Q Consensus 321 --~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~ivd~~ 397 (526)
...+++|.+++||+++++++.++|+..+ ++++.++||+||+++.++..... . ..++++|+|+ |+++++|+|.+
T Consensus 456 r~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~~~-~--~~~gsvG~p~~pg~e~ki~d~~ 531 (746)
T PTZ00342 456 KDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQHAD-D--NNTESIGGPISPNTKYKVRTWE 531 (746)
T ss_pred HHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeeccCC-C--CCcccccCcCCCcEEEEEeccc
Confidence 0126899999999999999999999988 78999999999998766543322 1 2378999998 99999999866
Q ss_pred CCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEe-cCeeeChHHHHH
Q 041055 398 TRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKH-NGYQVAPAELEA 476 (526)
Q Consensus 398 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~-~G~~v~~~eIE~ 476 (526)
+......+..|||+++||+++.|||++|+.|+++|+.+|||+|||+|++|+||+|+|+||+||+||. +|++|+|.+||+
T Consensus 532 ~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~ 611 (746)
T PTZ00342 532 TYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNN 611 (746)
T ss_pred ccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHH
Confidence 5554555567999999999999999999999999988999999999999999999999999999995 799999999999
Q ss_pred HHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC
Q 041055 477 VLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 477 ~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
++.+||.|.+|+|+|... ...++|+|++.+
T Consensus 612 ~l~~~p~V~~~~VvG~~~---~~~~~Alvv~d~ 641 (746)
T PTZ00342 612 LYSQISFINFCVVYGDDS---MDGPLAIISVDK 641 (746)
T ss_pred HHhcCCCccEEEEEccCC---ccccEEEEECCH
Confidence 999999999999999632 347899998764
No 8
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.5e-69 Score=570.28 Aligned_cols=448 Identities=21% Similarity=0.281 Sum_probs=357.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC----C-CC--ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS----A-TH--ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~----~-~~--~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
.++.+.+... ++.+| +++|++.. + .+ +++||+||.++++++|++|.+ +|+++||+|+|+++|+++|+++
T Consensus 45 ~t~~~~l~~~-a~~~p--d~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~n~~e~~~~ 120 (666)
T PLN02614 45 DSCWDVFRMS-VEKYP--NNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-VGVKDEAKCGIYGANSPEWIIS 120 (666)
T ss_pred CcHHHHHHHH-HHhCC--CCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 4788877766 66667 79998732 1 12 358999999999999999998 9999999999999999999999
Q ss_pred HHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC------CCC-EEEEcCCCC---------CCCc
Q 041055 121 CLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV------NVP-IIVTSRDQS---------NNKS 184 (526)
Q Consensus 121 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~i~~~~~~~---------~~~~ 184 (526)
+|||+++|++++|+++.++.+++.+++++++++++|++.+....+... .++ ++.++.... ....
T Consensus 121 ~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~ 200 (666)
T PLN02614 121 MEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVI 200 (666)
T ss_pred HHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEE
Confidence 999999999999999999999999999999999999988765544211 122 333332110 0012
Q ss_pred chHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc---ccCCCCcEEEEeCChh
Q 041055 185 VSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD---VTHAQNDIFLCMIPMF 261 (526)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~---~~~~~~~~~l~~~p~~ 261 (526)
.++.++...... ...+.....++++++|+|||||||.||||++||+++...+......+. ..+.++|++++.+|++
T Consensus 201 ~~~~~~~~~~~~-~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~ 279 (666)
T PLN02614 201 YAWDEFLKLGEG-KQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLA 279 (666)
T ss_pred EEHHHHHhhccc-CCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHH
Confidence 344444332211 111112346789999999999999999999999999987665543321 1356889999999999
Q ss_pred HHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhccC----------------------
Q 041055 262 HIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD---------------------- 319 (526)
Q Consensus 262 ~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------- 319 (526)
|+++.. ....++..|+++++.+ +++..+++.|+++++|+++++|+++..+.+....
T Consensus 280 H~~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 280 HIFDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 999984 4556678899988875 5899999999999999999999999988642100
Q ss_pred ----------CC-------------CC-CCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccc
Q 041055 320 ----------SS-------------YL-TSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQA 375 (526)
Q Consensus 320 ----------~~-------------~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~ 375 (526)
.. .+ +++|.+++||+++++++ ++|.+.++++.+++.||+||+++.++...+. ..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-~~ 435 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPD-EL 435 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccc-cC
Confidence 00 11 68999999999999875 5677777678999999999997654432221 11
Q ss_pred cCCCCcccccCCCcEEEEEeCC--CCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEE
Q 041055 376 RARSGSCGALSPTFYAKVVDTE--TRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLY 453 (526)
Q Consensus 376 ~~~~~~~G~~~~~~~~~ivd~~--~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~ 453 (526)
...+++|+|.|+++++|+|.+ .+.++++|+.|||+|+||+++.|||++|+.|+++| .+|||+|||+|++|+||+|+
T Consensus 436 -~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~ 513 (666)
T PLN02614 436 -DMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLHTGDVGEWQPNGSMK 513 (666)
T ss_pred -CcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCcccceEEEEcCCCCEE
Confidence 126899999999999999843 34678999999999999999999999999999999 58999999999999999999
Q ss_pred EEccccceEEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC
Q 041055 454 IVDRIKELIKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 454 ~~GR~~d~ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
|+||.||+||+ +|++|+|.|||++|.+||.|.+++|+|..+. ..++|+|++.+
T Consensus 514 i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~~l~alvv~~~ 567 (666)
T PLN02614 514 IIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---SFLVAIANPNQ 567 (666)
T ss_pred EEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEeCCH
Confidence 99999999996 7999999999999999999999999997542 46899998764
No 9
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.1e-68 Score=565.59 Aligned_cols=476 Identities=21% Similarity=0.277 Sum_probs=382.7
Q ss_pred CCCCCChhhhhcccCCCCCCCCCceEEEeC----CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHH
Q 041055 44 TRTDLDTATCVLSRFPHPDLAESRVALIDS----ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPS 119 (526)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~ 119 (526)
.+..+|+...++++.+...| +++|+++. +..+++||+||.+++.++|++|.+ +|+++||+|+++++|++++++
T Consensus 47 ~~~~~n~~~~~l~~~~~~~p--~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~Gd~V~i~~~n~~e~v~ 123 (628)
T TIGR02316 47 AGGRTNLCHNALDRHLDERG--EQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-LGVGRGDRVLIYMPMIAEAVF 123 (628)
T ss_pred CCCEeeHHHHHHHHHhCcCC--CCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 34557766544444244455 79999862 234789999999999999999998 999999999999999999999
Q ss_pred HHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH------------HHh-hc---CCCCEEEEcCCCCC--
Q 041055 120 ICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEEL------------QKL-TK---VNVPIIVTSRDQSN-- 181 (526)
Q Consensus 120 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------------~~~-~~---~~~~~i~~~~~~~~-- 181 (526)
++|||+++|++++|+++.++.+++.+++++++++++|+++... ... .. ....+++++.....
T Consensus 124 ~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 203 (628)
T TIGR02316 124 AMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMR 203 (628)
T ss_pred HHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcC
Confidence 9999999999999999999999999999999999999975421 111 11 11224444422100
Q ss_pred ---CCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHH-HHHHhhhhcccCCCCcEEEEe
Q 041055 182 ---NKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISI-MQLLRWTVDVTHAQNDIFLCM 257 (526)
Q Consensus 182 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~-~~~~~~~~~~~~~~~~~~l~~ 257 (526)
.....+.++...... ...+.....++++++|+|||||||.||||+++|.++... .......++ ..++|++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~--~~~~d~~~~~ 280 (628)
T TIGR02316 204 LIPGRDVDYAALRTQHED-AQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFG--IRAGQVMFSA 280 (628)
T ss_pred cccCccccHHHHhhcccc-CCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcC--CCCCcEEEEc
Confidence 112233333222111 111222346789999999999999999999999997643 333444444 6788999999
Q ss_pred CChhHHHHHHHHHHhhcccCcEEEEecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceEEE
Q 041055 258 IPMFHIYGLAFFATGLFCCGVTIVVMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRRVG 330 (526)
Q Consensus 258 ~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~v~ 330 (526)
.|++|+.|+...++.++..|+++++.+. +++..+++.++++++|+++++|++++.|.+.. ....++++||.++
T Consensus 281 ~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~ 360 (628)
T TIGR02316 281 SDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLF 360 (628)
T ss_pred CCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEE
Confidence 9999999986778899999999999863 57899999999999999999999999988763 2356789999999
Q ss_pred EecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCccc-ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcce
Q 041055 331 SGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQ-ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGE 409 (526)
Q Consensus 331 ~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Ge 409 (526)
+||+++++++.+++++.+ +..+++.||+||++..++....... .....+++|+|+||++++|+|++++++++.|+.||
T Consensus 361 ~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Ge 439 (628)
T TIGR02316 361 LAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGV 439 (628)
T ss_pred EecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEE
Confidence 999999999999999988 6889999999999864443222111 11236889999999999999977899999999999
Q ss_pred EEEecc---ccccccCCCHHHHhccc---CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCC
Q 041055 410 LWLKSP---TIMRGYFGNEEATAAAF---DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPN 483 (526)
Q Consensus 410 l~v~~~---~~~~gy~~~~~~t~~~~---~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~ 483 (526)
|+++|| +++.|||++++.+.+.+ ..++||+|||+|++|+||+++++||.||+||++|++|+|.|||++|.+||+
T Consensus 440 l~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~ 519 (628)
T TIGR02316 440 LTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPS 519 (628)
T ss_pred EEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCC
Confidence 999998 57899999998877654 247899999999999999999999999999999999999999999999999
Q ss_pred cccEEEEeeeCCCCCceEEEEEEeCCCCCC--------CHHHHHHHHHhcC
Q 041055 484 ILDAAVIPLEDEEAGQIPMAYVVRAAGSQL--------TEDQVMQFVTSQL 526 (526)
Q Consensus 484 v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~--------~~~~l~~~l~~~l 526 (526)
|.||+|++++++..|+.+++||+++++... ..++|+++++++|
T Consensus 520 V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L 570 (628)
T TIGR02316 520 VAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQL 570 (628)
T ss_pred cceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhc
Confidence 999999999999999999999999876432 2467888888875
No 10
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.4e-69 Score=568.58 Aligned_cols=478 Identities=20% Similarity=0.285 Sum_probs=376.0
Q ss_pred CCCCCCCCChhhhhcccCCCCCCCCCceEEEeCC----CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc
Q 041055 41 RIPTRTDLDTATCVLSRFPHPDLAESRVALIDSA----THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL 116 (526)
Q Consensus 41 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~ 116 (526)
.+.+...+|....++++.++....++++|++... ..+++||+||.+++.++|++|++ +|+++||+|+++++|+++
T Consensus 51 ~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GDrV~i~~~n~~e 129 (647)
T PTZ00237 51 DWFKGGELNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-LNISKNDNVLIYMANTLE 129 (647)
T ss_pred hhCCCCeeeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHH
Confidence 4444566887777766523221123799998632 13689999999999999999998 999999999999999999
Q ss_pred hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh---------HHHhh---c-C--CC-CEEEEcCCC-
Q 041055 117 YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEE---------LQKLT---K-V--NV-PIIVTSRDQ- 179 (526)
Q Consensus 117 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~---~-~--~~-~~i~~~~~~- 179 (526)
+++++|||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+. . . .. .++++....
T Consensus 130 ~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 209 (647)
T PTZ00237 130 PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDI 209 (647)
T ss_pred HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCc
Confidence 999999999999999999999999999999999999999997521 11111 1 1 11 233321110
Q ss_pred -------------CCCCcchHHHHhhhcC---CCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHH-HHHHHHHHhh
Q 041055 180 -------------SNNKSVSVEELIECCD---AADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHAN-FISIMQLLRW 242 (526)
Q Consensus 180 -------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~-l~~~~~~~~~ 242 (526)
.......+.++..... .....+....+++++++|+|||||||.||||+++|.+ +.........
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~ 289 (647)
T PTZ00237 210 TSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS 289 (647)
T ss_pred ccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence 0011223444332110 0011112245678999999999999999999999998 4433322233
Q ss_pred hhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC--CC----HHHHHHHHHhcCccEeecccHHHHHHHhh
Q 041055 243 TVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR--FD----LQAMIEAIKTYQVNNIPLVPPVILGLVKY 316 (526)
Q Consensus 243 ~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~--~~----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 316 (526)
... ...++++++..|++|+.+. ..++.++..|+++++.+. +. +..+++.++++++|+++++|++++.|++.
T Consensus 290 ~~~--~~~~d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 366 (647)
T PTZ00237 290 IIE--KDIPTVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKT 366 (647)
T ss_pred hcC--CCCCcEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhh
Confidence 333 5668999999999998765 467889999999998753 12 68899999999999999999999999875
Q ss_pred c------cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcE
Q 041055 317 C------KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFY 390 (526)
Q Consensus 317 ~------~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 390 (526)
. ....++++||.+++||+++++++.+++++.+ ++++.+.||+||+++.++.... . .....+++|+|.|+++
T Consensus 367 ~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~~-~-~~~~~~s~G~p~~g~~ 443 (647)
T PTZ00237 367 DPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCYG-H-INIPYNATGVPSIFIK 443 (647)
T ss_pred CccccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccCC-C-CCCCCCCCccCcCCce
Confidence 2 1345789999999999999999999999998 6899999999999865443222 1 1122589999999999
Q ss_pred EEEEeCCCCccCCCCCcceEEEecc---ccccccCCCHHHHhcccCC-CCeeeccceEEEcCCCcEEEEccccceEEecC
Q 041055 391 AKVVDTETRLALPPYQRGELWLKSP---TIMRGYFGNEEATAAAFDE-DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNG 466 (526)
Q Consensus 391 ~~ivd~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~t~~~~~~-~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G 466 (526)
++|+| ++|++++.|+.|||++++| +++.|||+|++.+.+.|.. +|||+|||+|++|+||+++|+||+||+||++|
T Consensus 444 ~~i~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G 522 (647)
T PTZ00237 444 PSILS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISG 522 (647)
T ss_pred EEEEC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECC
Confidence 99999 5788999999999999986 7899999999999988854 79999999999999999999999999999999
Q ss_pred eeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCC---CCCH----HHHHHHHHhcC
Q 041055 467 YQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGS---QLTE----DQVMQFVTSQL 526 (526)
Q Consensus 467 ~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~---~~~~----~~l~~~l~~~l 526 (526)
++|+|.|||++|.+||.|.|++|++++++..|+.++|||+++++. ..+. ++|+++++++|
T Consensus 523 ~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l 589 (647)
T PTZ00237 523 NKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDI 589 (647)
T ss_pred EEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999998542 3343 45667777654
No 11
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=7.2e-68 Score=553.08 Aligned_cols=472 Identities=42% Similarity=0.674 Sum_probs=402.2
Q ss_pred CCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHH
Q 041055 47 DLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFS 126 (526)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 126 (526)
.+|+.++++++ +...+ +++|+++...++++||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 22 ~~~~~~~l~~~-~~~~~--~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-~g~~~gd~V~i~~~~~~~~~~~~la~~~ 97 (537)
T PLN02246 22 HLPLHDYCFER-LSEFS--DRPCLIDGATGRVYTYADVELLSRRVAAGLHK-LGIRQGDVVMLLLPNCPEFVLAFLGASR 97 (537)
T ss_pred CCcHHHHHHHH-HHhCC--CCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 37899999888 55566 79999986556899999999999999999998 9999999999999999999999999999
Q ss_pred cCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC----CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCC
Q 041055 127 LGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV----NVPIIVTSRDQSNNKSVSVEELIECCDAADELPG 202 (526)
Q Consensus 127 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (526)
+|++++|++|.++.+++..+++.+++++++++......+... ...++.++... .....+.+...... ...+.
T Consensus 98 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~--~~~~~ 173 (537)
T PLN02246 98 RGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPP--EGCLHFSELTQADE--NELPE 173 (537)
T ss_pred cCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCC--CCceeHHHHhcCCC--CCCCC
Confidence 999999999999999999999999999999988766554321 23444444321 22233333322111 11222
Q ss_pred CCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh--cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEE
Q 041055 203 CQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV--DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTI 280 (526)
Q Consensus 203 ~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~--~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 280 (526)
....++++++++|||||||.||+|+++|+++........... .+.+.++|+++..+|++|.+++...++.++..|+++
T Consensus 174 ~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 253 (537)
T PLN02246 174 VEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAI 253 (537)
T ss_pred CCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEE
Confidence 245678999999999999999999999999987765543211 123678999999999999999867778889999999
Q ss_pred EEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccc
Q 041055 281 VVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGL 359 (526)
Q Consensus 281 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~ 359 (526)
++.+.+++..+++.++++++|++.++|+++..|++.. .....++++|.+++||+++++++.+.+++++++..+++.||+
T Consensus 254 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~ 333 (537)
T PLN02246 254 LIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGM 333 (537)
T ss_pred EEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccc
Confidence 9999999999999999999999999999999998763 334567899999999999999999999999988899999999
Q ss_pred ccccceeecccC--cccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCe
Q 041055 360 TESCGATTFMVS--PKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGW 437 (526)
Q Consensus 360 tE~~~~~~~~~~--~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~ 437 (526)
||++.+++.+.. .......++++|+|+++++++|+|++++++++.|+.|||+++|+.++.||+++++.+...|+.++|
T Consensus 334 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~ 413 (537)
T PLN02246 334 TEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGW 413 (537)
T ss_pred cccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccccCCchhhhhcccCCCC
Confidence 999876543221 111122367899999999999999888999999999999999999999999999999999988999
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHH
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQ 517 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~ 517 (526)
|+|||+|+++++|++++.||.||+||.+|++|+|.|||++|.++|+|.+++|++.+++..++.++++|++.++...++++
T Consensus 414 ~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 493 (537)
T PLN02246 414 LHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGSEITEDE 493 (537)
T ss_pred eeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999998887778899
Q ss_pred HHHHHHhcC
Q 041055 518 VMQFVTSQL 526 (526)
Q Consensus 518 l~~~l~~~l 526 (526)
|+++++++|
T Consensus 494 l~~~l~~~l 502 (537)
T PLN02246 494 IKQFVAKQV 502 (537)
T ss_pred HHHHHHhhC
Confidence 999998875
No 12
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.9e-68 Score=564.08 Aligned_cols=468 Identities=27% Similarity=0.385 Sum_probs=387.1
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC------CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS------ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSIC 121 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~------~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~ 121 (526)
.++.+.+... ++.+| +++|+++. +..+++||+||.+++.++|++|++ +|+++||+|+++++|++++++++
T Consensus 25 ~t~~~~l~~~-a~~~p--~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gi~~gd~V~i~~~n~~e~~~~~ 100 (632)
T PRK07529 25 ASTYELLSRA-AARHP--DAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-LGVGPGDVVAFLLPNLPETHFAL 100 (632)
T ss_pred CCHHHHHHHH-HHHCC--CCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHH
Confidence 5788888776 66677 78999852 235799999999999999999998 99999999999999999999999
Q ss_pred HHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh-----HHHhh----c-CCCC-EEEEcCCC-----------
Q 041055 122 LAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEE-----LQKLT----K-VNVP-IIVTSRDQ----------- 179 (526)
Q Consensus 122 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~-~~~~-~i~~~~~~----------- 179 (526)
|||+++| +++|+++.++.+++.++++++++++++++... ...+. . ...+ ++.++...
T Consensus 101 lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 179 (632)
T PRK07529 101 WGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVP 179 (632)
T ss_pred HHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccccccccccc
Confidence 9999999 57999999999999999999999999997542 12221 1 1222 23333221
Q ss_pred -----CCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEE
Q 041055 180 -----SNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIF 254 (526)
Q Consensus 180 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~ 254 (526)
.......+.+.................++++++++|||||||.||+|.+||+++..........+. ..+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~--~~~~d~~ 257 (632)
T PRK07529 180 LIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLG--LGPGDTV 257 (632)
T ss_pred ccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcC--CCCCCEE
Confidence 011223344433322111111111346789999999999999999999999999887766665555 5789999
Q ss_pred EEeCChhHHHHHHHHHHhhcccCcEEEEecCC------CHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceE
Q 041055 255 LCMIPMFHIYGLAFFATGLFCCGVTIVVMQRF------DLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRR 328 (526)
Q Consensus 255 l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~------~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~ 328 (526)
++.+|++|.++....++.++..|+++++.+.. ....+++.++++++|++.++|+++..|++......+++++|.
T Consensus 258 l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~slr~ 337 (632)
T PRK07529 258 FCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHDISSLRY 337 (632)
T ss_pred EEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCCccceEE
Confidence 99999999999977888999999999987532 236889999999999999999999999987555567899999
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeC-CCC---ccCCC
Q 041055 329 VGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDT-ETR---LALPP 404 (526)
Q Consensus 329 v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~-~~~---~~~~~ 404 (526)
+++||+++++++.+++++.+ ++++++.||+||++.++....... ....+++|+|+|++.++++.. +++ +++++
T Consensus 338 v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~ 414 (632)
T PRK07529 338 ALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPDG--ERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAV 414 (632)
T ss_pred EEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCccc--cccCCCcccccCCceEEEEEcCCCCcccccCCC
Confidence 99999999999999999998 799999999999987665433221 223789999999999998632 345 78999
Q ss_pred CCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCc
Q 041055 405 YQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNI 484 (526)
Q Consensus 405 g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v 484 (526)
|+.|||+|+||+++.||++++ .+...|..+|||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+||.|
T Consensus 415 g~~Gel~v~gp~v~~GY~~~~-~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V 493 (632)
T PRK07529 415 DEVGVLCIAGPNVFSGYLEAA-HNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAV 493 (632)
T ss_pred CCceEEEEECCCccccccCCc-cccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCe
Confidence 999999999999999999865 4566666789999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 485 LDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 485 ~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
.+|+|++.+++..|+.++|+|++.++...++++++++++++|
T Consensus 494 ~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~l 535 (632)
T PRK07529 494 ALAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDHI 535 (632)
T ss_pred eEEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHhc
Confidence 999999999999999999999999998888999999998875
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=4.7e-68 Score=563.73 Aligned_cols=477 Identities=26% Similarity=0.379 Sum_probs=387.5
Q ss_pred CCCCCCCCChhhhhcccCCCCCCCCCceEEEeCC----CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc
Q 041055 41 RIPTRTDLDTATCVLSRFPHPDLAESRVALIDSA----THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL 116 (526)
Q Consensus 41 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~ 116 (526)
++.++..+|+...++++.++..| +++|++..+ ..+.+||+||.+++.++|++|++ +|+++||+|+++++|+++
T Consensus 49 ~wf~~~~~n~~~~~l~~~~~~~p--~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e 125 (625)
T TIGR02188 49 KWFVGGELNVSYNCVDRHLEARP--DKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-LGVKKGDRVAIYMPMIPE 125 (625)
T ss_pred eeCCCCEEEHHHHHHHHhhccCC--CCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHH
Confidence 34444557777766655355555 799998632 24689999999999999999998 999999999999999999
Q ss_pred hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHH---------H----hhcC--CCC-EEEEcCCCC
Q 041055 117 YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQ---------K----LTKV--NVP-IIVTSRDQS 180 (526)
Q Consensus 117 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~----~~~~--~~~-~i~~~~~~~ 180 (526)
+++++|||+++|++++|+++.++.+++.+++++++++++|+++.... . +... ..+ ++++.....
T Consensus 126 ~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (625)
T TIGR02188 126 AAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGN 205 (625)
T ss_pred HHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCC
Confidence 99999999999999999999999999999999999999999865321 1 1111 122 333322110
Q ss_pred C-----CCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHH-HhhhhcccCCCCcEE
Q 041055 181 N-----NKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQL-LRWTVDVTHAQNDIF 254 (526)
Q Consensus 181 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~ 254 (526)
. .....+.++...... ..+.....++++++|+|||||||.||||+++|++++..... ....++ +.++|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~--~~~~d~~ 281 (625)
T TIGR02188 206 PVPWVEGRDVWWHDLMAKASA--YCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFD--IKDGDIF 281 (625)
T ss_pred CcCccccccccHHHHHhhcCC--CCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccC--CCCCcEE
Confidence 0 111223333322111 11222456789999999999999999999999998654433 333334 6788999
Q ss_pred EEeCChhHHHHHHHHHHhhcccCcEEEEecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCce
Q 041055 255 LCMIPMFHIYGLAFFATGLFCCGVTIVVMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLR 327 (526)
Q Consensus 255 l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr 327 (526)
++..|++|+.+....++.++..|+++++.+. +++..+++.++++++|++.++|++++.|.+.. .+..++++||
T Consensus 282 ~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr 361 (625)
T TIGR02188 282 WCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLR 361 (625)
T ss_pred EECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCcccee
Confidence 9999999999886778899999999998753 47999999999999999999999999998863 2346789999
Q ss_pred EEEEecCCCCHHHHHHHHHhCC--CCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCC-C
Q 041055 328 RVGSGAAPLSKELADEFRAKFP--WVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALP-P 404 (526)
Q Consensus 328 ~v~~gG~~l~~~~~~~~~~~~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~-~ 404 (526)
.++++|+++++++.+++.+.++ ++++++.||+||+++.+....... ....++++|+|++|++++|+| +++++++ +
T Consensus 362 ~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~ 439 (625)
T TIGR02188 362 LLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGA-TPTKPGSATLPFFGIEPAVVD-EEGNPVEGP 439 (625)
T ss_pred EEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCC-CCcCCCcccCCcCCceEEEEC-CCCCCCCCC
Confidence 9999999999999999999985 378999999999987655433221 122378999999999999999 6788898 9
Q ss_pred CCcceEEEec--cccccccCCCHHHHhcccC--CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhc
Q 041055 405 YQRGELWLKS--PTIMRGYFGNEEATAAAFD--EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLS 480 (526)
Q Consensus 405 g~~Gel~v~~--~~~~~gy~~~~~~t~~~~~--~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~ 480 (526)
|+.|||+|+| |++++|||++++.+.+.+. .+|||+|||+|++|+||+++++||+||+||++|++|+|.|||++|.+
T Consensus 440 g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~ 519 (625)
T TIGR02188 440 GEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVS 519 (625)
T ss_pred CCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHh
Confidence 9999999999 6899999999998887763 47899999999999999999999999999999999999999999999
Q ss_pred CCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhcC
Q 041055 481 HPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE---DQVMQFVTSQL 526 (526)
Q Consensus 481 ~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~---~~l~~~l~~~l 526 (526)
||.|.|++|++++++..|+.++|+|+++++...++ ++|+++++++|
T Consensus 520 ~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l 568 (625)
T TIGR02188 520 HPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEI 568 (625)
T ss_pred CCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999998866543 67888888765
No 14
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.4e-68 Score=568.71 Aligned_cols=447 Identities=25% Similarity=0.324 Sum_probs=364.2
Q ss_pred CChhhhhcccCCCCCCCCCceEEEe---CC----CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALID---SA----THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~---~~----~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
.++++++... ++..| +++|+.. .+ ..+.+||+||.++++++|++|.+ +|+++||+|+|+++|+++|+++
T Consensus 44 ~tl~~~l~~~-a~~~p--~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~~ 119 (651)
T PLN02736 44 GTLHDNFVYA-VETFR--DYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-HGIPKGACVGLYFINRPEWLIV 119 (651)
T ss_pred CCHHHHHHHH-HHhCC--CCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHH
Confidence 5788887776 66667 7888832 11 12569999999999999999998 9999999999999999999999
Q ss_pred HHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCCEEE-EcCCCC---------CCCcc
Q 041055 121 CLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVPIIV-TSRDQS---------NNKSV 185 (526)
Q Consensus 121 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~i~-~~~~~~---------~~~~~ 185 (526)
++||+++|++++|+++.++.+++.+++++++++++|++.+....+... ..+.++ .+.... .....
T Consensus 120 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~ 199 (651)
T PLN02736 120 DHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIV 199 (651)
T ss_pred HHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEE
Confidence 999999999999999999999999999999999999998766554321 223333 221110 01123
Q ss_pred hHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHH
Q 041055 186 SVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYG 265 (526)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 265 (526)
.+.++...... ...+.....++++++|+|||||||.||||++||+++...+......+. ..++|++++.+|++|+++
T Consensus 200 ~~~~~~~~~~~-~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~--~~~~d~~l~~lPl~h~~~ 276 (651)
T PLN02736 200 TYSKLLAQGRS-SPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTK--FYPSDVHISYLPLAHIYE 276 (651)
T ss_pred EHHHHHHhccc-CCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccC--CCCCCEEEEeCCHHHHHH
Confidence 44444432211 111122456799999999999999999999999999988877766555 678999999999999999
Q ss_pred HHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc---------------------------
Q 041055 266 LAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK--------------------------- 318 (526)
Q Consensus 266 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------------------------- 318 (526)
+ ..++.++..|+++++.+. ++..+++.|+++++|+++++|+++..+.+...
T Consensus 277 ~-~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (651)
T PLN02736 277 R-VNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALEN 354 (651)
T ss_pred H-HHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHc
Confidence 9 466778899999988764 78999999999999999999999988765310
Q ss_pred --CC-------------CCC-CCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcc
Q 041055 319 --DS-------------SYL-TSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSC 382 (526)
Q Consensus 319 --~~-------------~~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 382 (526)
.. ..+ +++|.+++||+++++++.+++.+.+ ++++++.||+||+++.++...... ..++++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~~~---~~~~~v 430 (651)
T PLN02736 355 GKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMDEGD---NLSGHV 430 (651)
T ss_pred CCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccCCCC---CCCCcc
Confidence 00 011 4899999999999999999999888 688999999999987665433221 237899
Q ss_pred cccCCCcEEEEEeCCCCc---cCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEcccc
Q 041055 383 GALSPTFYAKVVDTETRL---ALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIK 459 (526)
Q Consensus 383 G~~~~~~~~~ivd~~~~~---~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~ 459 (526)
|+|+|+++++|+|.+++. ...++..|||+|+||+++.|||++++.|++.|+.+|||+|||+|++|+||+++|+||.|
T Consensus 431 G~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~k 510 (651)
T PLN02736 431 GSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKK 510 (651)
T ss_pred CCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEech
Confidence 999999999999954332 22344579999999999999999999999999889999999999999999999999999
Q ss_pred ceEEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCC
Q 041055 460 ELIKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAG 510 (526)
Q Consensus 460 d~ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~ 510 (526)
|+||+ +|++|+|.|||++|.+||.|.+|+|++. ..++.++|+|++.++
T Consensus 511 d~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~ 559 (651)
T PLN02736 511 NIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPE 559 (651)
T ss_pred hheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHH
Confidence 99997 7999999999999999999999999983 357899999998753
No 15
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2.2e-68 Score=559.29 Aligned_cols=465 Identities=26% Similarity=0.412 Sum_probs=381.3
Q ss_pred CCCCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 45 RTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
..+.|+.+++... ++.+| +++|+++. ++.+||+||.+++.++|++|.+ +|+++||+|+++++|+++++++++||
T Consensus 4 ~~~~~~~~~~~~~-~~~~p--~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~Gv~~gd~V~v~~~n~~~~~~~~la~ 77 (563)
T PLN02860 4 HSQAHICQCLTRL-ATLRG--NAVVTISG--NRRRTGHEFVDGVLSLAAGLLR-LGLRNGDVVAIAALNSDLYLEWLLAV 77 (563)
T ss_pred hhhhHHHHHHHHH-HHhcC--CceEEecC--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3457888988877 66777 78999873 5789999999999999999998 99999999999999999999999999
Q ss_pred HHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHH---HhhcCCC---CE-EEEcCCCCCCCcchHHHHhhhcC--
Q 041055 125 FSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQ---KLTKVNV---PI-IVTSRDQSNNKSVSVEELIECCD-- 195 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---~~~~~~~---~~-i~~~~~~~~~~~~~~~~~~~~~~-- 195 (526)
+++|++++|+++.++.+++.++++++++++++++.+... .+..... .. ++.+... ......+.+......
T Consensus 78 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~ 156 (563)
T PLN02860 78 ACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPS-SSVFIFLNSFLTTEMLK 156 (563)
T ss_pred hhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcc-cccccchhhccccchhc
Confidence 999999999999999999999999999999999875422 2211111 12 2222111 000011111110000
Q ss_pred -C--CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHh
Q 041055 196 -A--ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATG 272 (526)
Q Consensus 196 -~--~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 272 (526)
. ..........++++++++|||||||.||+|.++|+++..........+. ..++|+++..+|++|.+|+ ..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~g~-~~~~~ 233 (563)
T PLN02860 157 QRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVG--YGEDDVYLHTAPLCHIGGL-SSALA 233 (563)
T ss_pred cCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcC--CCCCCEEEEecCchhhccH-HHHHH
Confidence 0 0000111346789999999999999999999999999876665555544 6788999999999999998 56778
Q ss_pred hcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc---CCCCCCCceEEEEecCCCCHHHHHHHHHhCC
Q 041055 273 LFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK---DSSYLTSLRRVGSGAAPLSKELADEFRAKFP 349 (526)
Q Consensus 273 ~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~ 349 (526)
++..|+++++.+.+++..+++.++++++|++.++|+++..|++... ....++++|.+++||+++++++.+.|++.|+
T Consensus 234 ~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~ 313 (563)
T PLN02860 234 MLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFP 313 (563)
T ss_pred HHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999987622 2356789999999999999999999999998
Q ss_pred CCceeeccccccccceeecccCccc--------------------ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcce
Q 041055 350 WVELRQGYGLTESCGATTFMVSPKQ--------------------ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGE 409 (526)
Q Consensus 350 ~~~l~~~yG~tE~~~~~~~~~~~~~--------------------~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Ge 409 (526)
++++++.||+||++..++....... ......++|+|+|+++++|++++ +|+.||
T Consensus 314 ~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Ge 387 (563)
T PLN02860 314 NAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGR 387 (563)
T ss_pred CCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeE
Confidence 8999999999999765443211110 01112368999999999999954 678999
Q ss_pred EEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEE
Q 041055 410 LWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAV 489 (526)
Q Consensus 410 l~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~v 489 (526)
|+++|++++.|||++++.+.+.|..+|||+|||+|++|+||++++.||.||+||++|++|+|.|||+++.+||.|.+++|
T Consensus 388 l~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v 467 (563)
T PLN02860 388 ILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVV 467 (563)
T ss_pred EEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEE
Confidence 99999999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeCCCCCceEEEEEEeCCCC--------------CCCHHHHHHHHHhc
Q 041055 490 IPLEDEEAGQIPMAYVVRAAGS--------------QLTEDQVMQFVTSQ 525 (526)
Q Consensus 490 v~~~~~~~~~~~~a~vv~~~~~--------------~~~~~~l~~~l~~~ 525 (526)
++++++..++.++|+|+++++. ..+.++++++++++
T Consensus 468 ~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 517 (563)
T PLN02860 468 VGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREK 517 (563)
T ss_pred EEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhC
Confidence 9999999999999999998762 35667899998863
No 16
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.2e-68 Score=557.28 Aligned_cols=457 Identities=29% Similarity=0.379 Sum_probs=387.5
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcC
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLG 128 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 128 (526)
++.+.+.+. ++..| +++|+++. ++.+||+||.++++++|++|.+ +|+++||+|+++++|++++++++|||+++|
T Consensus 50 ~~~~~~~~~-a~~~p--d~~Al~~~--~~~~Ty~el~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la~~~~G 123 (549)
T PRK07788 50 PFAGLVAHA-ARRAP--DRAALIDE--RGTLTYAELDEQSNALARGLLA-LGVRAGDGVAVLARNHRGFVLALYAAGKVG 123 (549)
T ss_pred hHHHHHHHH-HHHCC--CceEEEEC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 577777666 66667 79999984 6799999999999999999998 899999999999999999999999999999
Q ss_pred CEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCCEEEEcCCC---CCCCcchHHHHhhhcCCCCCC
Q 041055 129 AILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVPIIVTSRDQ---SNNKSVSVEELIECCDAADEL 200 (526)
Q Consensus 129 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 200 (526)
++++|+++.++.+++.++++++++++++++.+....+... ....+...... ....+..+.++...... ...
T Consensus 124 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 202 (549)
T PRK07788 124 ARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSST-APL 202 (549)
T ss_pred CEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCCC-CCC
Confidence 9999999999999999999999999999998766655322 12222222111 11234455554432111 111
Q ss_pred CCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEE
Q 041055 201 PGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTI 280 (526)
Q Consensus 201 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 280 (526)
....++.++++|||||||.||+|.++|+++...+......+. ..++++++...|++|.+|+ ..++.++..|+++
T Consensus 203 ---~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~d~~~~~~p~~~~~g~-~~~~~~l~~G~~~ 276 (549)
T PRK07788 203 ---PKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVP--FRAGETTLLPAPMFHATGW-AHLTLAMALGSTV 276 (549)
T ss_pred ---CCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCC--CCcCCeEEEccchHHHHHH-HHHHHHHHhCCEE
Confidence 234567899999999999999999999999988776666555 6788999999999999998 5566788999999
Q ss_pred EEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc---CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 281 VVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK---DSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 281 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
++...+++..+++.++++++|++.++|+++..+++... ...+++++|.+++||+++++++.+++.+.+ +..+++.|
T Consensus 277 v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~Y 355 (549)
T PRK07788 277 VLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLY 355 (549)
T ss_pred EECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-Cccceecc
Confidence 99988999999999999999999999999999988732 456788999999999999999999999998 57899999
Q ss_pred ccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCe
Q 041055 358 GLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGW 437 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~ 437 (526)
|+||++..+..... .....++++|+|.++++++|+| +++++++.|+.|||+|+|+.++.||++++.. . . .+||
T Consensus 356 G~TE~~~~~~~~~~--~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~ 428 (549)
T PRK07788 356 GSTEVAFATIATPE--DLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I-IDGL 428 (549)
T ss_pred CcchhchhhccChh--hhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c-cCCc
Confidence 99999765443221 1122368999999999999999 5688999999999999999999999998765 2 2 4799
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHH
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQ 517 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~ 517 (526)
|+|||++++++||++++.||.||+||++|++|+|.|||++|.++|.|.+++|++.+++..|+.++|+|+++++...+.++
T Consensus 429 ~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~ 508 (549)
T PRK07788 429 LSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDA 508 (549)
T ss_pred eecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999998999999999999888888899
Q ss_pred HHHHHHhcC
Q 041055 518 VMQFVTSQL 526 (526)
Q Consensus 518 l~~~l~~~l 526 (526)
++++++++|
T Consensus 509 l~~~~~~~l 517 (549)
T PRK07788 509 IKDYVRDNL 517 (549)
T ss_pred HHHHHHHhh
Confidence 999999875
No 17
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.6e-68 Score=567.22 Aligned_cols=446 Identities=24% Similarity=0.287 Sum_probs=354.9
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC-------CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS-------ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~-------~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
.++.+++... ++.+| +++|+... +..+++||+||.+++.++|++|.+ +|+++||+|+|+++|++||+++
T Consensus 43 ~t~~~~l~~~-~~~~p--~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~~ 118 (660)
T PLN02861 43 DSPWQFFSDA-VKKYP--NNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-RGVNPGDRCGIYGSNCPEWIIA 118 (660)
T ss_pred CCHHHHHHHH-HHhCC--CCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 4677877766 66666 68888531 112579999999999999999998 9999999999999999999999
Q ss_pred HHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC------CCC-EEEEcCCCC---------CCCc
Q 041055 121 CLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV------NVP-IIVTSRDQS---------NNKS 184 (526)
Q Consensus 121 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~i~~~~~~~---------~~~~ 184 (526)
+|||+++|++++|+++.++.+++.+++++++++++|++.+....+... .++ ++.++.... ....
T Consensus 119 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 198 (660)
T PLN02861 119 MEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSC 198 (660)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEE
Confidence 999999999999999999999999999999999999987765544321 233 333322110 0112
Q ss_pred chHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcc---cCCCCcEEEEeCChh
Q 041055 185 VSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDV---THAQNDIFLCMIPMF 261 (526)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~---~~~~~~~~l~~~p~~ 261 (526)
.++.++...... ..+.....++++++|+|||||||.||||++||++++..+......+.. ...++|++++.+|++
T Consensus 199 ~~~~~~~~~~~~--~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~ 276 (660)
T PLN02861 199 FSWEEFSLMGSL--DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLA 276 (660)
T ss_pred EEHHHHHHhCcc--cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHH
Confidence 344444332211 111124467999999999999999999999999999877665443321 135789999999999
Q ss_pred HHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc------------------------
Q 041055 262 HIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC------------------------ 317 (526)
Q Consensus 262 ~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------ 317 (526)
|++++.. .+.++..|+++++. .+++..+++.|+++++|+++++|+++..+.+..
T Consensus 277 H~~~~~~-~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 354 (660)
T PLN02861 277 HVYDQVI-ETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLG 354 (660)
T ss_pred HHHHHHH-HHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999854 45578999998887 468999999999999999999999999886410
Q ss_pred -----------c---CC-------CCC-CCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccc
Q 041055 318 -----------K---DS-------SYL-TSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQA 375 (526)
Q Consensus 318 -----------~---~~-------~~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~ 375 (526)
. +. ..+ +++|.+++||+++++++. +|.+.++...+++.||+||+++.++......
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-- 431 (660)
T PLN02861 355 NLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIANV-- 431 (660)
T ss_pred HHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeeccccc--
Confidence 0 00 012 579999999999999975 5666665557999999999976555432221
Q ss_pred cCCCCcccccCCCcEEEEEeC-CCC-ccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEE
Q 041055 376 RARSGSCGALSPTFYAKVVDT-ETR-LALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLY 453 (526)
Q Consensus 376 ~~~~~~~G~~~~~~~~~ivd~-~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~ 453 (526)
....+++|+|+|+++++|+|. +.+ ..++++..|||+|+||+++.|||++|+.|+++| .+|||+|||+|++|+||+|+
T Consensus 432 ~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~ 510 (660)
T PLN02861 432 FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHTGDIGEWQPNGAMK 510 (660)
T ss_pred CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcccCceEEECCCCcEE
Confidence 112689999999999999983 333 344566789999999999999999999999999 58999999999999999999
Q ss_pred EEccccceEEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeC
Q 041055 454 IVDRIKELIKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 454 ~~GR~~d~ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~ 508 (526)
|.||+||+||+ +|++|+|.|||++|.+||.|.+|+|+|.+. ++.++|+|++.
T Consensus 511 i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~ 563 (660)
T PLN02861 511 IIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPD 563 (660)
T ss_pred EEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcC
Confidence 99999999996 799999999999999999999999999763 47899999976
No 18
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=3.7e-67 Score=548.62 Aligned_cols=475 Identities=40% Similarity=0.643 Sum_probs=399.8
Q ss_pred CCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHH
Q 041055 47 DLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFS 126 (526)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 126 (526)
..|+.+.+... ++..| +++|+++...++.+||.||.+++.++|..|.+ .|+++||+|+++++|+++++++++||++
T Consensus 27 ~~~~~~~l~~~-a~~~p--~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 102 (546)
T PLN02330 27 KLTLPDFVLQD-AELYA--DKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-LGLRKGQVVVVVLPNVAEYGIVALGIMA 102 (546)
T ss_pred CCcHHHHHhhh-hhcCC--CccEEEecCCCCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 36788888877 66666 79999986557899999999999999999998 8999999999999999999999999999
Q ss_pred cCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCC-CCCCCCCC
Q 041055 127 LGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAA-DELPGCQL 205 (526)
Q Consensus 127 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 205 (526)
+|++++|+++..+.+++.++++++++++++++......+.....+++.++... ......+.+........ ...+....
T Consensus 103 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (546)
T PLN02330 103 AGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEK-IEGAVNWKELLEAADRAGDTSDNEEI 181 (546)
T ss_pred hCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCC-CCCcccHHHHHhhccccCcccccccC
Confidence 99999999999999999999999999999999888777766566666655332 22234455544322211 11112234
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR 285 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~ 285 (526)
.++++++++|||||||.||+|.++|+++...+..............++.+..+|++|.+|+...++.++..|+++++.+.
T Consensus 182 ~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~ 261 (546)
T PLN02330 182 LQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSR 261 (546)
T ss_pred CcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecc
Confidence 56889999999999999999999999998765432222211122356889999999999987777888999999999999
Q ss_pred CCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCC--CceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccc
Q 041055 286 FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLT--SLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTES 362 (526)
Q Consensus 286 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~--~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~ 362 (526)
+++..+++.++++++|++.++|+++..+++.. .....+. .+|.+++||+++++++.+++.+.|+++++++.||+||+
T Consensus 262 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~ 341 (546)
T PLN02330 262 FELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEH 341 (546)
T ss_pred cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEeccccccc
Confidence 99999999999999999999999999998762 2233343 47899999999999999999999988999999999999
Q ss_pred cceeecccCccc--ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeec
Q 041055 363 CGATTFMVSPKQ--ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKT 440 (526)
Q Consensus 363 ~~~~~~~~~~~~--~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~T 440 (526)
+.+......... .....+++|.|+++++++|+|+++++++|+|+.|||+++|+.++.||+++++.+.+.++.+|||+|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~T 421 (546)
T PLN02330 342 SCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHT 421 (546)
T ss_pred ccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccCccchhhhccCCCceec
Confidence 765443221111 112256899999999999999888999999999999999999999999999999999988999999
Q ss_pred cceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHH
Q 041055 441 GDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQ 520 (526)
Q Consensus 441 GD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~ 520 (526)
||+|++++||++++.||.+|+||++|++|+|.+||++|.++|.|.+++|++++++..|+.++++|++.++...+.+++++
T Consensus 422 GD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~~~~l~~ 501 (546)
T PLN02330 422 GDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKESEEDILN 501 (546)
T ss_pred ccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998999999999998877777888999
Q ss_pred HHHhcC
Q 041055 521 FVTSQL 526 (526)
Q Consensus 521 ~l~~~l 526 (526)
+++++|
T Consensus 502 ~~~~~l 507 (546)
T PLN02330 502 FVAANV 507 (546)
T ss_pred HHHHhc
Confidence 998865
No 19
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-67 Score=557.78 Aligned_cols=473 Identities=26% Similarity=0.395 Sum_probs=384.0
Q ss_pred CCCCChhhhhcccCCCCCCCCCceEEEeCC----CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 45 RTDLDTATCVLSRFPHPDLAESRVALIDSA----THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
+..+|+...++++.++..| +++|+++.+ ..+.+||+||.+++.++|++|.+ +|+++||+|+++++|+++++++
T Consensus 63 ~~~~n~~~~~l~~~~~~~p--~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~ 139 (637)
T PRK00174 63 DGELNVSYNCLDRHLKTRG--DKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-LGVKKGDRVAIYMPMIPEAAVA 139 (637)
T ss_pred CCEeEHHHHHHHHhhccCC--CCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 4457776665554345555 799998632 24589999999999999999998 9999999999999999999999
Q ss_pred HHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHH---------Hh----hc-CCCC-EEEEcCCCCC----
Q 041055 121 CLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQ---------KL----TK-VNVP-IIVTSRDQSN---- 181 (526)
Q Consensus 121 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~----~~-~~~~-~i~~~~~~~~---- 181 (526)
+|||+++|++++|++|.++.+++.+++++++++++|+++.... .+ .. .... ++++......
T Consensus 140 ~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (637)
T PRK00174 140 MLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDWV 219 (637)
T ss_pred HHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCcC
Confidence 9999999999999999999999999999999999999765321 11 11 1222 2333221100
Q ss_pred -CCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHH-HhhhhcccCCCCcEEEEeCC
Q 041055 182 -NKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQL-LRWTVDVTHAQNDIFLCMIP 259 (526)
Q Consensus 182 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~l~~~p 259 (526)
.....+.+...... ...+.....++++++|+|||||||.||||+++|++++..... ....++ ..++|++++..|
T Consensus 220 ~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~--~~~~d~~~~~~~ 295 (637)
T PRK00174 220 EGRDLWWHELVAGAS--DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFD--YKDGDVYWCTAD 295 (637)
T ss_pred CCCcccHHHHHhhcC--CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccC--CCCCcEEEEcCC
Confidence 11222333332211 111222456789999999999999999999999998754433 333334 677899999999
Q ss_pred hhHHHHHHHHHHhhcccCcEEEEecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhhcc---CCCCCCCceEEEEe
Q 041055 260 MFHIYGLAFFATGLFCCGVTIVVMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK---DSSYLTSLRRVGSG 332 (526)
Q Consensus 260 ~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~l~~lr~v~~g 332 (526)
++|+.+....++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|++... ...++++||.+++|
T Consensus 296 ~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~ 375 (637)
T PRK00174 296 VGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSV 375 (637)
T ss_pred chHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEe
Confidence 99999987778899999999998753 479999999999999999999999999988622 34578899999999
Q ss_pred cCCCCHHHHHHHHHhCC--CCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceE
Q 041055 333 AAPLSKELADEFRAKFP--WVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGEL 410 (526)
Q Consensus 333 G~~l~~~~~~~~~~~~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel 410 (526)
|+++++++.+++.+.++ ++++++.||+||++..+....... ....++++|+|++|++++|+| +++++++.|+.|||
T Consensus 376 Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel 453 (637)
T PRK00174 376 GEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA-TPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNL 453 (637)
T ss_pred CCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC-CCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEE
Confidence 99999999999999885 378999999999987655432211 112367899999999999999 66889999999999
Q ss_pred EEec--cccccccCCCHHHHhccc--CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCccc
Q 041055 411 WLKS--PTIMRGYFGNEEATAAAF--DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILD 486 (526)
Q Consensus 411 ~v~~--~~~~~gy~~~~~~t~~~~--~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~ 486 (526)
+|+| |++++|||++++.+.+.+ ..+|||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+||+|.+
T Consensus 454 ~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~ 533 (637)
T PRK00174 454 VIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAE 533 (637)
T ss_pred EEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcce
Confidence 9999 699999999999888775 347899999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCceEEEEEEeCCCCCCC---HHHHHHHHHhcC
Q 041055 487 AAVIPLEDEEAGQIPMAYVVRAAGSQLT---EDQVMQFVTSQL 526 (526)
Q Consensus 487 ~~vv~~~~~~~~~~~~a~vv~~~~~~~~---~~~l~~~l~~~l 526 (526)
|+|++.+++..|+.++|+|++.++...+ .++|+++++++|
T Consensus 534 ~~Vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l 576 (637)
T PRK00174 534 AAVVGRPDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEI 576 (637)
T ss_pred EEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999876554 467888888765
No 20
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.9e-67 Score=548.19 Aligned_cols=457 Identities=21% Similarity=0.270 Sum_probs=370.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+.+. ++..| +++|+++. ..+++||+||.++++++|+.|.+ .+||+|+++++|+++|++++|||+++
T Consensus 19 ~~~~~~~~~~-~~~~p--~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~----~~gd~Val~~~n~~e~~~~~lA~~~~ 90 (539)
T PRK06334 19 KTVLESFLKL-CSEMT--TATVCWDE-QLGKLSYNQVRKAVIALATKVSK----YPDQHIGIMMPASAGAYIAYFATLLS 90 (539)
T ss_pred CcHHHHHHHH-HHhCC--CceEEEeC-CCCcccHHHHHHHHHHHHHHHhh----ccCCeEEEEcCCchHHHHHHHHHHhc
Confidence 4577777666 66666 68999874 34689999999999999999976 38999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCC-----C--CEEEEcCCCCCCCcchHHHHhhh----cCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVN-----V--PIIVTSRDQSNNKSVSVEELIEC----CDA 196 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-----~--~~i~~~~~~~~~~~~~~~~~~~~----~~~ 196 (526)
|++++|+++.++.+++.++++++++++++++.+....+.... . .++.++... ....+.+.... ..+
T Consensus 91 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~ 167 (539)
T PRK06334 91 GKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVR---KELSFWEKCRIGIYMSIP 167 (539)
T ss_pred CCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhh---hhccHHHhhhhhhhhcCC
Confidence 999999999999999999999999999999987665543211 1 233332110 00011111000 000
Q ss_pred C----CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHh
Q 041055 197 A----DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATG 272 (526)
Q Consensus 197 ~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 272 (526)
. .........++++++++|||||||.||+|++||+++..........+. ..++|++++.+|++|++|+...++.
T Consensus 168 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~ 245 (539)
T PRK06334 168 FEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFS--PKEDDVMMSFLPPFHAYGFNSCTLF 245 (539)
T ss_pred chhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcC--CCCCceEEEecchHhhhhhHHHHHH
Confidence 0 000111356789999999999999999999999999887766555554 6789999999999999999766788
Q ss_pred hcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCC
Q 041055 273 LFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPW 350 (526)
Q Consensus 273 ~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~ 350 (526)
++..|+++++.. .+++..+++.|+++++|++.++|+++..|++. ......++++|.+++||+++++++.+++.+.+|+
T Consensus 246 ~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~ 325 (539)
T PRK06334 246 PLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPH 325 (539)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCC
Confidence 899999998875 58999999999999999999999999999886 3345678999999999999999999999999988
Q ss_pred CceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhc
Q 041055 351 VELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAA 430 (526)
Q Consensus 351 ~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~ 430 (526)
+.+++.||+||++.+++...... ....+++|+|+++++++|+|++++.++++|+.|||+|+|++++.|||++++.+..
T Consensus 326 ~~i~~~YG~TE~~~~~~~~~~~~--~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~ 403 (539)
T PRK06334 326 IQLRQGYGTTECSPVITINTVNS--PKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGF 403 (539)
T ss_pred CeEEecccccccCceEEeccCCC--CCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccc
Confidence 99999999999987666433221 1225689999999999999988889999999999999999999999999986554
Q ss_pred cc-CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCccc------EEEEeeeCCCCCceEEE
Q 041055 431 AF-DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILD------AAVIPLEDEEAGQIPMA 503 (526)
Q Consensus 431 ~~-~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~------~~vv~~~~~~~~~~~~a 503 (526)
.. +.++||+|||+|++|++|++++.||.||+||++|++|+|.|||++|.+||+|.+ ++|++++++. ..+++
T Consensus 404 ~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~--~~~~~ 481 (539)
T PRK06334 404 VELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEK--VRLCL 481 (539)
T ss_pred eeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCc--eEEEE
Confidence 32 357899999999999999999999999999999999999999999999999998 7888877532 34455
Q ss_pred EEEeCCCCCCCHHHHHHHHHhc
Q 041055 504 YVVRAAGSQLTEDQVMQFVTSQ 525 (526)
Q Consensus 504 ~vv~~~~~~~~~~~l~~~l~~~ 525 (526)
+++.. .+.++++++|+++
T Consensus 482 ~~~~~----~~~~~~~~~l~~~ 499 (539)
T PRK06334 482 FTTFP----TSISEVNDILKNS 499 (539)
T ss_pred EEecc----CChHHHHHHHHhc
Confidence 55432 3567899998875
No 21
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-68 Score=487.11 Aligned_cols=462 Identities=28% Similarity=0.399 Sum_probs=399.8
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+.++ ++++| |++|++++ ++.+||+||.++++++|.+|++ +|+++||+|.+.++|..++++++||++++
T Consensus 28 ~~l~d~L~~~-A~~~p--driAv~d~--~~~~sY~eLdqr~d~LAa~l~~-lGi~~Gd~vlvQLpN~~ef~~~~FALlrl 101 (542)
T COG1021 28 RTLTDILTDH-AARYP--DRIAVIDG--ERRLSYAELDQRADRLAAGLRR-LGIKPGDTVLVQLPNVAEFYITFFALLRL 101 (542)
T ss_pred CcHHHHHHHH-HhhcC--CceEEecC--cccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCchHHHHHHHHHHHHc
Confidence 5677888888 77888 89999985 5779999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh--------HHHhh--cCCCCEEEEcCCCCCCCcchHHHHhhhcCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEE--------LQKLT--KVNVPIIVTSRDQSNNKSVSVEELIECCDAA 197 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 197 (526)
|..+|..-|.....+|.+..+..+++.+|.+... ...+. ...++.+++.+.... ...++..+ .....
T Consensus 102 Gv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~--~~~~~~~~-~~~a~ 178 (542)
T COG1021 102 GVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEH--PSVLEAAL-CHPAG 178 (542)
T ss_pred CcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCC--cchhhhhh-hCccc
Confidence 9999999999999999999999999999987542 11111 224455555533211 11111111 11111
Q ss_pred CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHH-HHHHhhccc
Q 041055 198 DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLA-FFATGLFCC 276 (526)
Q Consensus 198 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~~l~~ 276 (526)
...+.++.++++++++..|.||||.||.+..+|.....++......++ +.++.++++.+|..|.+.+. -..++.++.
T Consensus 179 ~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~--~~~~tvyL~~LP~AHNfplssPG~LGv~~a 256 (542)
T COG1021 179 LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICG--FDQQTVYLCALPAAHNFPLSSPGALGVFLA 256 (542)
T ss_pred cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhC--cCccceEEEecccccCCCCCCcchhheeee
Confidence 233334667889999999999999999999999999988888888887 78999999999999988773 367889999
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+++|+.+..+++..+.+|+++++|+..++|+....|++. .....+|+|||.+-+||+.+++++.+++...+ ++.+.+
T Consensus 257 gG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQ 335 (542)
T COG1021 257 GGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQ 335 (542)
T ss_pred ccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHH
Confidence 9999999999999999999999999999999999999998 66789999999999999999999999999999 899999
Q ss_pred ccccccccceeecccCcccccCCCCcccccC-CCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC
Q 041055 356 GYGLTESCGATTFMVSPKQARARSGSCGALS-PTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE 434 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~ 434 (526)
.|||.|.....+...++.+. -..+-|+|+ |.-+++|+| ++|+++++|++|+|..+||..++|||+-|+.++.+|+.
T Consensus 336 VFGMAEGLvnyTRLDDp~E~--i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a 412 (542)
T COG1021 336 VFGMAEGLVNYTRLDDPPEI--IIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDA 412 (542)
T ss_pred HhhhhhhhhcccccCCchHh--eeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCc
Confidence 99999986555543333222 256889987 788999999 77999999999999999999999999999999999999
Q ss_pred CCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCC
Q 041055 435 DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLT 514 (526)
Q Consensus 435 ~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~ 514 (526)
+|||+|||++++++||++.+.||.||+|+.+|++|...|||+.|..||.|.+|++|+++|+-.||+.+||||.++. ..+
T Consensus 413 ~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~-~~~ 491 (542)
T COG1021 413 DGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEP-PLR 491 (542)
T ss_pred CCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999865 377
Q ss_pred HHHHHHHHHhc
Q 041055 515 EDQVMQFVTSQ 525 (526)
Q Consensus 515 ~~~l~~~l~~~ 525 (526)
..+++.+|+++
T Consensus 492 ~~qlr~~L~~~ 502 (542)
T COG1021 492 AAQLRRFLRER 502 (542)
T ss_pred HHHHHHHHHHc
Confidence 89999999875
No 22
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-66 Score=545.65 Aligned_cols=488 Identities=26% Similarity=0.432 Sum_probs=395.8
Q ss_pred ceeecCCCCCCCCCCCCCCCCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEE
Q 041055 28 GIYHSLIQLGENYRIPTRTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVV 107 (526)
Q Consensus 28 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V 107 (526)
+.|.++...|+.+.+.++...|+.+.+... ++..+ +++|+++. ++.+||+||.+++.++|+.|.+..|+++||+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-a~~~p--~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~V 78 (562)
T PRK05677 4 NFWKDKYPAGIAAEINPDEYPNIQAVLKQS-CQRFA--DKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRI 78 (562)
T ss_pred chhhhhcccCCCcccCCCccCcHHHHHHHH-HHhCC--CCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 456666655555555444445788887766 55566 79999974 57999999999999999999863599999999
Q ss_pred EEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhh----cCCCCEEEEcCCCC-C-
Q 041055 108 FVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLT----KVNVPIIVTSRDQS-N- 181 (526)
Q Consensus 108 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~----~~~~~~i~~~~~~~-~- 181 (526)
+++++|+++|++++|||+++|++++|++|.++.+++.+++++++++++|++.+....+. ....+.+++..... .
T Consensus 79 ai~~~n~~~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (562)
T PRK05677 79 AVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLP 158 (562)
T ss_pred EEECCCCHHHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999876544322 11233332221100 0
Q ss_pred -----------------------CCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHH
Q 041055 182 -----------------------NKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQ 238 (526)
Q Consensus 182 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~ 238 (526)
.....+.+....... ...+.....++++++++|||||||.||+|.++|+++...+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~ 237 (562)
T PRK05677 159 PLKRLLINAVVKHVKKMVPAYHLPQAVKFNDALAKGAG-QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANML 237 (562)
T ss_pred chhhhhcccchhhccccccccCCcccccHHHHHhcCCC-CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHH
Confidence 001112222111111 11111234678999999999999999999999999987765
Q ss_pred HHhhhhcccCC-CCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhh
Q 041055 239 LLRWTVDVTHA-QNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY 316 (526)
Q Consensus 239 ~~~~~~~~~~~-~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 316 (526)
.....+..... ..+++++.+|++|.+++...++..+..|...++.+ .+++..+++.++++++|+++++|+++..+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 317 (562)
T PRK05677 238 QCRALMGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNN 317 (562)
T ss_pred HHHHHhccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhC
Confidence 55444332223 34688999999999998666777777787766654 57899999999999999999999999999876
Q ss_pred c-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEe
Q 041055 317 C-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVD 395 (526)
Q Consensus 317 ~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd 395 (526)
. .....++++|.+++||+++++++.+.|.+.+ ++++++.||+||++.++...... ...++++|.|+++++++|+|
T Consensus 318 ~~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~---~~~~~~vG~~~~~~~v~i~d 393 (562)
T PRK05677 318 EAFRKLDFSALKLTLSGGMALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPSQ---AIQVGTIGIPVPSTLCKVID 393 (562)
T ss_pred cccccCChhhceEEEEcCccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCcc---CCCCCccCccCCCCEEEEEC
Confidence 3 2345678999999999999999999999988 78999999999998766543321 11267899999999999999
Q ss_pred CCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHH
Q 041055 396 TETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELE 475 (526)
Q Consensus 396 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE 475 (526)
+ ++.+++.|+.|||+++|+.++.||+++++.|.+.|..+|||+|||+|+++++|.+++.||.+|+||++|++|+|.|||
T Consensus 394 ~-~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE 472 (562)
T PRK05677 394 D-DGNELPLGEVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELE 472 (562)
T ss_pred C-CCCCCCCCCCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHH
Confidence 5 578899999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 476 AVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 476 ~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
++|.+||+|.+++|++++++..++.++++|++.++...+.++++++++++|
T Consensus 473 ~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l 523 (562)
T PRK05677 473 DVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLTKEQVMEHMRANL 523 (562)
T ss_pred HHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 999999999999999999998899999999988877788899999998875
No 23
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=5.3e-67 Score=518.39 Aligned_cols=457 Identities=26% Similarity=0.352 Sum_probs=375.2
Q ss_pred CCCCCCCCChhhhhcccCCCCCCCCCceEEEe------CCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC
Q 041055 41 RIPTRTDLDTATCVLSRFPHPDLAESRVALID------SATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNS 114 (526)
Q Consensus 41 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~------~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~ 114 (526)
.-+.....++++.+... ....+ +.+++-. .+..+++||+|..+++..++.+|++ +|+++++.|+|+..|+
T Consensus 68 ~~~~~~~~T~~~~f~~~-~~~~~--~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-lG~~~~~~VGIy~~N~ 143 (691)
T KOG1256|consen 68 SCPFDGPLTLYEGFRRS-VEKSG--NGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-LGVKEDSKVGIYAFNR 143 (691)
T ss_pred CCCCCCcccHHHHhhcc-hhccC--CCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCceEEEeccCC
Confidence 33344558899988877 55555 4566543 2345789999999999999999997 9999999999999999
Q ss_pred CchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEc-chhHHHhhcC-------CCC-EEEEcCCCC-----
Q 041055 115 LLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISA-SEELQKLTKV-------NVP-IIVTSRDQS----- 180 (526)
Q Consensus 115 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~-------~~~-~i~~~~~~~----- 180 (526)
+||++..+||...|+++||+..+++++.+.++++++++.++|++ ++....+.+. .++ +|.+++...
T Consensus 144 pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~ 223 (691)
T KOG1256|consen 144 PEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEK 223 (691)
T ss_pred hhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhh
Confidence 99999999999999999999999999999999999999999999 5555555421 133 444544321
Q ss_pred C----CCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHh---hhhcc-cCCCCc
Q 041055 181 N----NKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLR---WTVDV-THAQND 252 (526)
Q Consensus 181 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~---~~~~~-~~~~~~ 252 (526)
. ....+|.++.+.+......+...+.|+++|.|+|||||||.||||++||+|+++.+.... ..... ....+|
T Consensus 224 ~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~d 303 (691)
T KOG1256|consen 224 AENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDD 303 (691)
T ss_pred hhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCc
Confidence 1 226788888876643222221467899999999999999999999999999998655322 11111 123479
Q ss_pred EEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh----ccC---------
Q 041055 253 IFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY----CKD--------- 319 (526)
Q Consensus 253 ~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----~~~--------- 319 (526)
++++++|+.|++...... ..+..|+.+.+..+ |+..+.+.|++.+||.+.++|.+|.++.+. ..+
T Consensus 304 v~lSyLPLAHi~er~~~~-~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~ 381 (691)
T KOG1256|consen 304 VYLSYLPLAHIFERVVEL-YTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLF 381 (691)
T ss_pred eEEEeCcHHHHHHHHHHH-hHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHH
Confidence 999999999999995544 45588999988874 889999999999999999999998876433 000
Q ss_pred --------------CCC-------------------CCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccccee
Q 041055 320 --------------SSY-------------------LTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGAT 366 (526)
Q Consensus 320 --------------~~~-------------------l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 366 (526)
... -.++|.+++|++|+++++.+.++..+ +++|+++||+||+++.+
T Consensus 382 ~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~ 460 (691)
T KOG1256|consen 382 NFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGT 460 (691)
T ss_pred HHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCce
Confidence 000 14789999999999999999999998 89999999999999655
Q ss_pred ecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEE
Q 041055 367 TFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYF 446 (526)
Q Consensus 367 ~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~ 446 (526)
+...+... ..+++|.|+|+++++++|.++....+.|..|||||+|+++++||++||+.|+++||+|||++|||+|++
T Consensus 461 ~~~~~~d~---~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~ 537 (691)
T KOG1256|consen 461 TLTLPGDN---VLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEW 537 (691)
T ss_pred EeccCCCC---CCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeE
Confidence 55444333 289999999999999999888888888889999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEccccceEEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCC
Q 041055 447 DGEGFLYIVDRIKELIKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAG 510 (526)
Q Consensus 447 ~~~G~l~~~GR~~d~ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~ 510 (526)
+++|.|+|+||.|++||. +|++|.|..||++..+.+-|.+.+|.+-.. ...++|.|++++.
T Consensus 538 ~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~---~~~LvaiVvpd~e 599 (691)
T KOG1256|consen 538 DPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSL---RSFLVAIVVPDPE 599 (691)
T ss_pred CCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcc---hhcEEEEEecChh
Confidence 999999999999999996 899999999999999999999999998544 3689999998764
No 24
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-66 Score=544.53 Aligned_cols=469 Identities=26% Similarity=0.404 Sum_probs=390.2
Q ss_pred CCCChhhhhcccCCC-CCCCCCceEEEeCC--CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHH
Q 041055 46 TDLDTATCVLSRFPH-PDLAESRVALIDSA--THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICL 122 (526)
Q Consensus 46 ~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~--~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~l 122 (526)
..+|+...++++.++ ..+ +++|+++.+ ..+.+||+||.+++.++|.+|.+ +|+++||+|+++++|++++++++|
T Consensus 40 ~~~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~l 116 (570)
T PRK04319 40 GKVNIAYEAIDRHADGGRK--DKVALRYLDASRKEKYTYKELKELSNKFANVLKE-LGVEKGDRVFIFMPRIPELYFALL 116 (570)
T ss_pred CceeHHHHHHHHhhccCCC--CceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHH
Confidence 346777655555343 234 799998632 34789999999999999999997 999999999999999999999999
Q ss_pred HHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCC---CC-EEEEcCCC-CCCCcchHHHHhhhcCCC
Q 041055 123 AIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVN---VP-IIVTSRDQ-SNNKSVSVEELIECCDAA 197 (526)
Q Consensus 123 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---~~-~i~~~~~~-~~~~~~~~~~~~~~~~~~ 197 (526)
||+++|++++|+++.++.+++.++++++++++++++........... .. +++++... ......++.+.......
T Consensus 117 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 195 (570)
T PRK04319 117 GALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASD- 195 (570)
T ss_pred HHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCC-
Confidence 99999999999999999999999999999999999887654432111 11 33333221 11223345444332221
Q ss_pred CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccC
Q 041055 198 DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCG 277 (526)
Q Consensus 198 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G 277 (526)
..+.....++++++++|||||||.||+|+++|+++...+......+. +.++|++++..|++|.+|....++.++..|
T Consensus 196 -~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G 272 (570)
T PRK04319 196 -EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLD--LHEDDVYWCTADPGWVTGTSYGIFAPWLNG 272 (570)
T ss_pred -cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcC--CCCCceEEecCChHHhhCchHHHHHHHhcC
Confidence 11222446789999999999999999999999999887766665555 678899999999999998877888999999
Q ss_pred cEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCce
Q 041055 278 VTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVEL 353 (526)
Q Consensus 278 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l 353 (526)
+++++.. .+++..+++.|+++++|+++++|++++.|.+.. ....+++++|.+++||+++++++.+++++.+ +.++
T Consensus 273 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i 351 (570)
T PRK04319 273 ATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPI 351 (570)
T ss_pred ceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCe
Confidence 9998875 689999999999999999999999999998752 2345788999999999999999999999988 6899
Q ss_pred eeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEec--cccccccCCCHHHHhcc
Q 041055 354 RQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKS--PTIMRGYFGNEEATAAA 431 (526)
Q Consensus 354 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~t~~~ 431 (526)
++.||+||++..++...... ...++++|+|.|+++++|+| +++.++++|+.|||+++| ++++.||+++++.+.+.
T Consensus 352 ~~~YG~tE~~~~~~~~~~~~--~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~ 428 (570)
T PRK04319 352 HDNWWMTETGGIMIANYPAM--DIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESY 428 (570)
T ss_pred EeceeecccCCEEEecCCCC--CCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhh
Confidence 99999999987655432221 12378999999999999999 567788999999999997 89999999999999999
Q ss_pred cCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCC
Q 041055 432 FDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGS 511 (526)
Q Consensus 432 ~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~ 511 (526)
|. +|||+|||+++++++|+++++||.||+||.+|++|+|.|||++|.+||.|.+++|++.+++..|+.++++|++.++.
T Consensus 429 ~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~ 507 (570)
T PRK04319 429 FA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGY 507 (570)
T ss_pred hc-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCC
Confidence 95 89999999999999999999999999999999999999999999999999999999999998999999999998876
Q ss_pred CCCH---HHHHHHHHhcC
Q 041055 512 QLTE---DQVMQFVTSQL 526 (526)
Q Consensus 512 ~~~~---~~l~~~l~~~l 526 (526)
..++ ++++++++++|
T Consensus 508 ~~~~~~~~~l~~~~~~~l 525 (570)
T PRK04319 508 EPSEELKEEIRGFVKKGL 525 (570)
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 5543 57888888765
No 25
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.6e-67 Score=529.26 Aligned_cols=436 Identities=33% Similarity=0.481 Sum_probs=347.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCC--CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSA--THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIF 125 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~ 125 (526)
.++...+..+ ++..+ +.+|+.... ..+.+||+|+.+++.++|.+|.+ +|+..||+|+|++.|+++|+++.+||+
T Consensus 16 ~~~~~~~~~~-~~~~~--~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-lg~~~gdrvai~a~nr~eW~i~d~a~~ 91 (613)
T COG1022 16 HTLPKRLAER-VKDRP--DGVALMYKELGGWEAITYRELYERVRALASGLLS-LGIPAGDRVAIFAANRPEWAIADLAIL 91 (613)
T ss_pred ccHHHHHHHH-hhcCC--cceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 4566667766 55555 477877543 34789999999999999999998 999779999999999999999999999
Q ss_pred HcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc---CCCCEEE-----Ec--CCCCCCCcchHHHHhh---
Q 041055 126 SLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK---VNVPIIV-----TS--RDQSNNKSVSVEELIE--- 192 (526)
Q Consensus 126 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~---~~~~~i~-----~~--~~~~~~~~~~~~~~~~--- 192 (526)
.+|++.||++++++++++.++|++++++++|++......... ..++.+. .+ ..........+.....
T Consensus 92 ~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (613)
T COG1022 92 ALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGI 171 (613)
T ss_pred HcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccc
Confidence 999999999999999999999999999999999865443321 1111100 00 0000000000000000
Q ss_pred ----hcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHH
Q 041055 193 ----CCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAF 268 (526)
Q Consensus 193 ----~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~ 268 (526)
..............++|+|.|+|||||||.||||++||+|+++++........ ...++|+.++.+|+.|++..++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-~~~~~d~~LsfLPlaHi~Er~~ 250 (613)
T COG1022 172 SLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-PIGPGDRVLSFLPLAHIFERAF 250 (613)
T ss_pred hhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-CCCCCcEEEEeCcHHHHHHHHH
Confidence 00000111112567899999999999999999999999999999998877764 2679999999999999999954
Q ss_pred HHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-----ccCC-----------------------
Q 041055 269 FATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-----CKDS----------------------- 320 (526)
Q Consensus 269 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-----~~~~----------------------- 320 (526)
.....+..|+++. ...++..+++.++.++||+++++|.+|+.+-+. ....
T Consensus 251 ~~~~~~~~g~~~~--~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~ 328 (613)
T COG1022 251 EGGLALYGGVTVL--FKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALL 328 (613)
T ss_pred HHHHHhhcceEEE--ecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhc
Confidence 4444444444433 334899999999999999999999998876433 0000
Q ss_pred --------------------CCC-CCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCC
Q 041055 321 --------------------SYL-TSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARS 379 (526)
Q Consensus 321 --------------------~~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~ 379 (526)
..+ .++|.+++||+++++++..+++.. ++++.++||+||+++.++...+... ..
T Consensus 329 ~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~~~~---~~ 403 (613)
T COG1022 329 GGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNPPDRF---VL 403 (613)
T ss_pred ccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEccccCc---cc
Confidence 011 378999999999999999999988 6999999999999988777554432 28
Q ss_pred CcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEcccc
Q 041055 380 GSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIK 459 (526)
Q Consensus 380 ~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~ 459 (526)
+++|+|+|+++++|+| .|||+|+||++|+|||+||+.|+++|++||||+|||+|.+|++|+|+|.||+|
T Consensus 404 gtvG~p~p~~evKI~d-----------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK 472 (613)
T COG1022 404 GTVGKPLPGIEVKIAD-----------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKK 472 (613)
T ss_pred CCcCCcCCCceEEEcc-----------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeeccc
Confidence 9999999999999999 29999999999999999999999999999999999999999999999999999
Q ss_pred ceEEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCC
Q 041055 460 ELIKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAG 510 (526)
Q Consensus 460 d~ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~ 510 (526)
|+||. +|++|.|..||..+.++|.|.+++|++ .+. ..+.|.|++..+
T Consensus 473 ~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k---~~~~AlIvp~~~ 520 (613)
T COG1022 473 ELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDK---KFLVALIVPDFD 520 (613)
T ss_pred ceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCC---cceEEEEeCCHH
Confidence 99996 899999999999999999999999999 333 578899987643
No 26
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.8e-66 Score=543.13 Aligned_cols=461 Identities=24% Similarity=0.361 Sum_probs=370.2
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCC--------ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATH--------ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPS 119 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--------~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~ 119 (526)
+|+.+.+... +++.| +++|+++.+.+ +.+||+||.++++++|++|.+ +|+++||+|+++++|++++++
T Consensus 6 ~~~~~~l~~~-a~~~p--~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-~g~~~gd~V~~~~~n~~~~~~ 81 (552)
T PRK09274 6 ANIARHLPRA-AQERP--DQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-AGIGRGMRAVLMVTPSLEFFA 81 (552)
T ss_pred hhHHHHHHHH-HHhCC--CcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCcHHHHH
Confidence 5777777766 55666 79999874322 289999999999999999998 999999999999999999999
Q ss_pred HHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcch--hHHHhhcC---CCC-EEEEcCCCCCCCcchHHHHhhh
Q 041055 120 ICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASE--ELQKLTKV---NVP-IIVTSRDQSNNKSVSVEELIEC 193 (526)
Q Consensus 120 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~--~~~~~~~~---~~~-~i~~~~~~~~~~~~~~~~~~~~ 193 (526)
+++||+++|++++|++|.++.+++.+++++++++++|+++. ....+... ... ++.++.. .......+.+....
T Consensus 82 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~ 160 (552)
T PRK09274 82 LTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGR-LLWGGTTLATLLRD 160 (552)
T ss_pred HHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccc-cccCCccHHHhccc
Confidence 99999999999999999999999999999999999998752 22222211 111 2222211 01111223333211
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhh
Q 041055 194 CDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGL 273 (526)
Q Consensus 194 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~ 273 (526)
... ...+.....++++++++|||||||.||+|.++|+++...+......++ ..++++.+..+|++|++++
T Consensus 161 ~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~pl~~~~~~------- 230 (552)
T PRK09274 161 GAA-APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYG--IEPGEIDLPTFPLFALFGP------- 230 (552)
T ss_pred Ccc-ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhC--CCCCceeeeccCHHHhhhh-------
Confidence 111 111222456789999999999999999999999999988877776665 6788999999999887654
Q ss_pred cccCcEEEEec-------CCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHH
Q 041055 274 FCCGVTIVVMQ-------RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFR 345 (526)
Q Consensus 274 l~~G~~~v~~~-------~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~ 345 (526)
..|.++++.. .+++..+++.|+++++|+++++|+++..|++. .....+++++|.+++||+++++++.++++
T Consensus 231 -~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~ 309 (552)
T PRK09274 231 -ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFR 309 (552)
T ss_pred -hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHH
Confidence 2466666653 46889999999999999999999999999887 33456889999999999999999999999
Q ss_pred HhCC-CCceeeccccccccceeecccCc------cc-ccCCCCcccccCCCcEEEEEeCC--------CCccCCCCCcce
Q 041055 346 AKFP-WVELRQGYGLTESCGATTFMVSP------KQ-ARARSGSCGALSPTFYAKVVDTE--------TRLALPPYQRGE 409 (526)
Q Consensus 346 ~~~~-~~~l~~~yG~tE~~~~~~~~~~~------~~-~~~~~~~~G~~~~~~~~~ivd~~--------~~~~~~~g~~Ge 409 (526)
+.++ ++++++.||+||++.+++..... .. ......++|+|+|+++++|+|+. ++++++.|+.||
T Consensus 310 ~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Ge 389 (552)
T PRK09274 310 AMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGE 389 (552)
T ss_pred HHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeE
Confidence 9997 48999999999998765533211 00 01113478999999999999953 467899999999
Q ss_pred EEEeccccccccCCCHHHHhccc--CCCC--eeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcc
Q 041055 410 LWLKSPTIMRGYFGNEEATAAAF--DEDG--WLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNIL 485 (526)
Q Consensus 410 l~v~~~~~~~gy~~~~~~t~~~~--~~~~--~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~ 485 (526)
|+|+|++++.|||++++.|...| +.+| ||+|||+|++|+||+++++||.||+||++|.+|+|.|||++|.+||+|.
T Consensus 390 l~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~ 469 (552)
T PRK09274 390 IVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVK 469 (552)
T ss_pred EEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccc
Confidence 99999999999999999998876 3456 9999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhc
Q 041055 486 DAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQ 525 (526)
Q Consensus 486 ~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~ 525 (526)
+|+|++++++ .++.++++|++.++...+.++++++|+++
T Consensus 470 ~~~v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~ 508 (552)
T PRK09274 470 RSALVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRAL 508 (552)
T ss_pred eeEEEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHH
Confidence 9999999875 46789999999988776666666666654
No 27
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.5e-66 Score=546.81 Aligned_cols=478 Identities=23% Similarity=0.313 Sum_probs=380.6
Q ss_pred CCCCCCCChhhhhcccCCCCCCCCCceEEEeC----CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCch
Q 041055 42 IPTRTDLDTATCVLSRFPHPDLAESRVALIDS----ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLY 117 (526)
Q Consensus 42 ~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~ 117 (526)
+.+...+|+...++++.++..+ +++|+++. +..+.+||+||.+++.++|++|.+ +|+++||+|+++++|++++
T Consensus 46 wf~~~~~n~~~~~l~~~~~~~p--~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~ 122 (629)
T PRK10524 46 WFVGGRTNLCHNAVDRHLAKRP--EQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-LGVQRGDRVLIYMPMIAEA 122 (629)
T ss_pred cCCCcEeeHHHHHHHHhhccCC--CCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHH
Confidence 3344557876655544344555 79999863 234789999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh------------HHHhhc----CCCCEEEEcCCCC-
Q 041055 118 PSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEE------------LQKLTK----VNVPIIVTSRDQS- 180 (526)
Q Consensus 118 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------------~~~~~~----~~~~~i~~~~~~~- 180 (526)
++++|||+++|++++|++|.++.+++.+++++++++++|+++.. +..+.. ....+++++....
T Consensus 123 ~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 202 (629)
T PRK10524 123 AFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAP 202 (629)
T ss_pred HHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 99999999999999999999999999999999999999997532 111111 1122444432110
Q ss_pred ----CCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHH-HhhhhcccCCCCcEEE
Q 041055 181 ----NNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQL-LRWTVDVTHAQNDIFL 255 (526)
Q Consensus 181 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~l 255 (526)
......+.++...... ...+.....++++++++|||||||.||||+++|.+++..... ....++ ..++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~--~~~~d~~~ 279 (629)
T PRK10524 203 MARVAGRDVDYATLRAQHLG-ARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFG--GKAGETFF 279 (629)
T ss_pred cCcccCCcccHHHHHhcCCC-CCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcC--CCCCCEEE
Confidence 0111223333221111 111221346789999999999999999999999987644333 333344 67889999
Q ss_pred EeCChhHHHHHHHHHHhhcccCcEEEEec----CCCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceE
Q 041055 256 CMIPMFHIYGLAFFATGLFCCGVTIVVMQ----RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRR 328 (526)
Q Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~ 328 (526)
+..|++|..+..+.++.++..|+++++.. ..++..+++.++++++|+++++|++++.|.+.. ....+++++|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~ 359 (629)
T PRK10524 280 CASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRA 359 (629)
T ss_pred EcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeE
Confidence 99999999887677889999999999875 357899999999999999999999999988752 23467899999
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCc-ccccCCCCcccccCCCcEEEEEeCCCCccCCCCCc
Q 041055 329 VGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSP-KQARARSGSCGALSPTFYAKVVDTETRLALPPYQR 407 (526)
Q Consensus 329 v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~ 407 (526)
+++||+++++++.+++.+.+ ++++++.||+||++..+...... ......++++|+|+++++++|+|+++++++++|+.
T Consensus 360 i~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~ 438 (629)
T PRK10524 360 LFLAGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEK 438 (629)
T ss_pred EEEeCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCc
Confidence 99999999999999999998 68999999999998533322211 11122368999999999999999768999999999
Q ss_pred ceEEEecc---ccccccCCCHHHHhcccC---CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcC
Q 041055 408 GELWLKSP---TIMRGYFGNEEATAAAFD---EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSH 481 (526)
Q Consensus 408 Gel~v~~~---~~~~gy~~~~~~t~~~~~---~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~ 481 (526)
|||+++|| +++.|||++++.+.+.+. .++||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+|
T Consensus 439 Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~ 518 (629)
T PRK10524 439 GVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSH 518 (629)
T ss_pred EEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhC
Confidence 99999997 578899999988776542 468999999999999999999999999999999999999999999999
Q ss_pred CCcccEEEEeeeCCCCCceEEEEEEeCCCCCCC--------HHHHHHHHHhcC
Q 041055 482 PNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLT--------EDQVMQFVTSQL 526 (526)
Q Consensus 482 ~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~--------~~~l~~~l~~~l 526 (526)
|+|.+++|++++++..|+.+++||+++++...+ .++|+++++++|
T Consensus 519 p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l 571 (629)
T PRK10524 519 PAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQL 571 (629)
T ss_pred CCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhc
Confidence 999999999999998999999999998765432 367888888765
No 28
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-65 Score=535.71 Aligned_cols=455 Identities=24% Similarity=0.343 Sum_probs=380.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|+++. ++.+||+||.++++++|++|.+ +|+++|++|+++++|+++++++++||+++
T Consensus 43 ~~~~~~l~~~-a~~~p--~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 116 (537)
T PRK13382 43 MGPTSGFAIA-AQRCP--DRPGLIDE--LGTLTWRELDERSDALAAALQA-LPIGEPRVVGIMCRNHRGFVEALLAANRI 116 (537)
T ss_pred CCHHHHHHHH-HHhCC--CCeEEEeC--CCeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEecCcHHHHHHHHHHHHc
Confidence 5677877776 66677 79999974 5799999999999999999988 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC--CC---C-EEEEcCCCCCCCcchHHHHhhhcCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV--NV---P-IIVTSRDQSNNKSVSVEELIECCDAADELP 201 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~---~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (526)
|++++|+++.++.+++.+++++++++++|++......+... .. . ++...... ....+......... ..+
T Consensus 117 G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~ 191 (537)
T PRK13382 117 GADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED---HDLTVEVLIAAHAG--QRP 191 (537)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc---ccccHHHHhhccCc--CCC
Confidence 99999999999999999999999999999987655443211 11 1 22221111 11223322221111 111
Q ss_pred CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEE
Q 041055 202 GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIV 281 (526)
Q Consensus 202 ~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 281 (526)
...+++.++++|||||||.||+|.++|+++..........+. ...+++++...|++|.+|+ ..++.++..|++++
T Consensus 192 --~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~ 266 (537)
T PRK13382 192 --EPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTP--WRAEEPTVIVAPMFHAWGF-SQLVLAASLACTIV 266 (537)
T ss_pred --CCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhC--CCCCCeEEEecChHhhhHH-HHHHHHHhcCcEEE
Confidence 234678899999999999999999999888877666555544 5678999999999999998 66788888999999
Q ss_pred EecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc---CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccc
Q 041055 282 VMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK---DSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYG 358 (526)
Q Consensus 282 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG 358 (526)
+...++++.+++.|+++++|++.++|+++..|++... ...+++++|.+++||+++++++.+.|.+.+ +..+++.||
T Consensus 267 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG 345 (537)
T PRK13382 267 TRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYN 345 (537)
T ss_pred ECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeccc
Confidence 9989999999999999999999999999999987632 234567899999999999999999999999 568999999
Q ss_pred cccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCee
Q 041055 359 LTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWL 438 (526)
Q Consensus 359 ~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~ 438 (526)
+||++.+++.+.... ...++++|+|.+++.++|+|+ ++.+++.|+.|||+++|++++.||+ ++.+.. + .+|||
T Consensus 346 ~TE~~~~~~~~~~~~--~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~ 418 (537)
T PRK13382 346 ATEAGMIATATPADL--RAAPDTAGRPAEGTEIRILDQ-DFREVPTGEVGTIFVRNDTQFDGYT--SGSTKD-F-HDGFM 418 (537)
T ss_pred ccccCcceecChhHh--ccCCCCccccCcCcEEEEECC-CCCCCCCCCeeEEEEEcCCcccCcc--ccchhh-c-cCCCE
Confidence 999987665433221 223789999999999999994 6788999999999999999999998 444443 4 37999
Q ss_pred eccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHH
Q 041055 439 KTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQV 518 (526)
Q Consensus 439 ~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l 518 (526)
+|||++++++||++++.||.||+||.+|++|+|.|||.+|.++|.|.+++|++.+++..|+.++++|++.++...+.+++
T Consensus 419 ~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l 498 (537)
T PRK13382 419 ASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETL 498 (537)
T ss_pred eeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888999999999988877788999
Q ss_pred HHHHHhcC
Q 041055 519 MQFVTSQL 526 (526)
Q Consensus 519 ~~~l~~~l 526 (526)
+++++++|
T Consensus 499 ~~~l~~~l 506 (537)
T PRK13382 499 KQHVRDNL 506 (537)
T ss_pred HHHHHHhc
Confidence 99999875
No 29
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=3.5e-65 Score=533.76 Aligned_cols=462 Identities=26% Similarity=0.376 Sum_probs=387.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCC----CceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSAT----HERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLA 123 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~----~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA 123 (526)
.++.+.+... ++..| +++|+++... .+.+||+||.++++++|++|.+ +|+++||+|+++++|++++++++||
T Consensus 24 ~~l~~~l~~~-a~~~p--~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~Val~~~n~~e~~~~~la 99 (547)
T PRK13295 24 RTINDDLDAC-VASCP--DKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-LGVGRGDVVSCQLPNWWEFTVLYLA 99 (547)
T ss_pred CCHHHHHHHH-HHHCC--CceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHH
Confidence 4677877766 56666 7999987532 2799999999999999999998 9999999999999999999999999
Q ss_pred HHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh--------HHHhhc--CCCC-EEEEcCCCCCCCcchHHHHhh
Q 041055 124 IFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEE--------LQKLTK--VNVP-IIVTSRDQSNNKSVSVEELIE 192 (526)
Q Consensus 124 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~~--~~~~-~i~~~~~~~~~~~~~~~~~~~ 192 (526)
|+++|++++|++|.++.+++.++++.++++++++++.. ...+.. .... ++.++.. ...++.+...
T Consensus 100 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 175 (547)
T PRK13295 100 CSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGD----GADSFEALLI 175 (547)
T ss_pred HHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCC----CccCHHHHhh
Confidence 99999999999999999999999999999999998753 111111 1122 2222221 1122333221
Q ss_pred hc-----CCC-CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHH
Q 041055 193 CC-----DAA-DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGL 266 (526)
Q Consensus 193 ~~-----~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~ 266 (526)
.. ... .........++++++++|||||||.||+|.++|+++...+......+. +.+++++++.+|++|.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~l~~~p~~h~~g~ 253 (547)
T PRK13295 176 TPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLG--LGADDVILMASPMAHQTGF 253 (547)
T ss_pred CCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhC--CCCCCeEEEecCchhhhhH
Confidence 11 000 011111346789999999999999999999999999888777666555 6789999999999999998
Q ss_pred HHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHH
Q 041055 267 AFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFR 345 (526)
Q Consensus 267 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~ 345 (526)
...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+. ......++++|.+++||+++++++.+++.
T Consensus 254 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~ 333 (547)
T PRK13295 254 MYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERAR 333 (547)
T ss_pred HHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHH
Confidence 78888999999999999989999999999999999999999999999876 33456788999999999999999999999
Q ss_pred HhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCH
Q 041055 346 AKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNE 425 (526)
Q Consensus 346 ~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 425 (526)
+.+ ++++++.||+||++.+......... .....++|+|.++++++|+| +++++++.|+.|||+|+|++++.||++++
T Consensus 334 ~~~-~~~~~~~YG~TE~~~~~~~~~~~~~-~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~ 410 (547)
T PRK13295 334 AAL-GAKIVSAWGMTENGAVTLTKLDDPD-ERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRP 410 (547)
T ss_pred HHh-CCCeEEeccCCCCCCeeeccCCCcc-hhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCc
Confidence 999 7899999999999876554332211 12257899999999999999 56788999999999999999999999999
Q ss_pred HHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEE
Q 041055 426 EATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYV 505 (526)
Q Consensus 426 ~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~v 505 (526)
+.|... .+|||+|||+|+++++|++++.||.||+||++|++|+|.+||++|.+++.|.+++|++++++..|+.++++|
T Consensus 411 ~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 488 (547)
T PRK13295 411 QLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFV 488 (547)
T ss_pred cccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEE
Confidence 988876 578999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EeCCCCCCCHHHHHHHHHh
Q 041055 506 VRAAGSQLTEDQVMQFVTS 524 (526)
Q Consensus 506 v~~~~~~~~~~~l~~~l~~ 524 (526)
++.++...+.+++++++++
T Consensus 489 ~~~~~~~~~~~~l~~~~~~ 507 (547)
T PRK13295 489 VPRPGQSLDFEEMVEFLKA 507 (547)
T ss_pred EeCCCCCCCHHHHHHHHHh
Confidence 9988877777889999885
No 30
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.3e-65 Score=547.06 Aligned_cols=448 Identities=26% Similarity=0.367 Sum_probs=350.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC----------CCC-----------ceeCHHHHHHHHHHHHHHHHHhcCCCCCCE
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS----------ATH-----------ERVTYAQLHRSIRSLASGLYHALGVRKGDV 106 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~ 106 (526)
.|+.+.+.+. ++.+| +++|+... .++ +++||+||.+++.++|++|.+ +|+++||+
T Consensus 58 ~t~~~l~~~~-~~~~p--d~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-lG~~~gd~ 133 (696)
T PLN02387 58 TTLAALFEQS-CKKYS--DKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA-LGHNKEER 133 (696)
T ss_pred CCHHHHHHHH-HHHCC--CCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCE
Confidence 4677877776 67777 78888321 012 348999999999999999998 99999999
Q ss_pred EEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCC
Q 041055 107 VFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQS 180 (526)
Q Consensus 107 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~ 180 (526)
|+|+++|++||+++++||+++|++++|+++.++.+++.+++++++++++|++.+....+... ..+ ++.++....
T Consensus 134 Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~ 213 (696)
T PLN02387 134 VAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGV 213 (696)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999998776655422 222 444443211
Q ss_pred C----------CCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCC
Q 041055 181 N----------NKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQ 250 (526)
Q Consensus 181 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~ 250 (526)
. ....++.++...... ...+.....++++++|+|||||||.||||++||+++...+......+. .+.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~-~~~~ 291 (696)
T PLN02387 214 DSDSSLSGSSNWTVSSFSEVEKLGKE-NPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVP-KLGK 291 (696)
T ss_pred hhhhhhhccCCcEEEEHHHHHHhhcc-CCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcC-CCCC
Confidence 0 012234444332211 111112346799999999999999999999999999987776544321 2568
Q ss_pred CcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCC------C--HHHHHHHHHhcCccEeecccHHHHHHHhhccCC--
Q 041055 251 NDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRF------D--LQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDS-- 320 (526)
Q Consensus 251 ~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~------~--~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-- 320 (526)
+|++++.+|++|++++.. ...++..|+++.+.... + ...+++.++++++|++.++|.++..+.+.....
T Consensus 292 ~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~ 370 (696)
T PLN02387 292 NDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVD 370 (696)
T ss_pred CCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHh
Confidence 899999999999999843 33345566665543221 1 234567899999999999999999887531000
Q ss_pred -----------------------C----------------------CC-CCceEEEEecCCCCHHHHHHHHHhCCCCcee
Q 041055 321 -----------------------S----------------------YL-TSLRRVGSGAAPLSKELADEFRAKFPWVELR 354 (526)
Q Consensus 321 -----------------------~----------------------~l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~ 354 (526)
. .+ +++|.+++||+++++++.+.++..+ +++++
T Consensus 371 ~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~ 449 (696)
T PLN02387 371 AKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIG 449 (696)
T ss_pred cccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCee
Confidence 0 01 5899999999999999988888778 78999
Q ss_pred eccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCc-cC--CCCCcceEEEeccccccccCCCHHHHhcc
Q 041055 355 QGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRL-AL--PPYQRGELWLKSPTIMRGYFGNEEATAAA 431 (526)
Q Consensus 355 ~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~-~~--~~g~~Gel~v~~~~~~~gy~~~~~~t~~~ 431 (526)
++||+||+++.++..... + ...+++|+|+|+++++|+|.+++. .+ .++..|||+|+||+++.|||+||+.|.++
T Consensus 450 ~~YG~TEt~~~~~~~~~~-~--~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~ 526 (696)
T PLN02387 450 QGYGLTETCAGATFSEWD-D--TSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEV 526 (696)
T ss_pred EeechhhcccceeecCcc-c--CCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhh
Confidence 999999998766554332 1 237899999999999999954432 22 34557999999999999999999999999
Q ss_pred c--CCCC--eeeccceEEEcCCCcEEEEccccceEEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEE
Q 041055 432 F--DEDG--WLKTGDLCYFDGEGFLYIVDRIKELIKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVV 506 (526)
Q Consensus 432 ~--~~~~--~~~TGD~~~~~~~G~l~~~GR~~d~ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv 506 (526)
| +++| ||+|||+|++|+||+|+|+||.||+||+ +|++|+|.|||++|.+||.|.+++|++.+.. ..++|+|+
T Consensus 527 f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv 603 (696)
T PLN02387 527 YKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH---SYCVALVV 603 (696)
T ss_pred hccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEE
Confidence 8 4445 9999999999999999999999999997 6999999999999999999999999996633 56889998
Q ss_pred eCC
Q 041055 507 RAA 509 (526)
Q Consensus 507 ~~~ 509 (526)
+.+
T Consensus 604 ~~~ 606 (696)
T PLN02387 604 PSQ 606 (696)
T ss_pred eCH
Confidence 764
No 31
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.5e-65 Score=533.11 Aligned_cols=464 Identities=28% Similarity=0.453 Sum_probs=392.9
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhc-CCCCCCEEEEECCCCCchHHHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHAL-GVRKGDVVFVLAPNSLLYPSICLAIFS 126 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~-gl~~gd~V~i~~~n~~~~~~~~lA~~~ 126 (526)
.++.+.+... +...+ +++|+++. ++++||+||.+++.++|..|.+ . |+++|++|+++++|+++++++++||++
T Consensus 10 ~tl~~~l~~~-a~~~~--~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 83 (546)
T PRK08314 10 TSLFHNLEVS-ARRYP--DKTAIVFY--GRAISYRELLEEAERLAGYLQQ-ECGVRKGDRVLLYMQNSPQFVIAYYAILR 83 (546)
T ss_pred CCHHHHHHHH-HHHcC--CCcceeec--CceecHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 5678877766 56666 79999974 5799999999999999999998 7 999999999999999999999999999
Q ss_pred cCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC----CCCEEEEcC-CC----------------------
Q 041055 127 LGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV----NVPIIVTSR-DQ---------------------- 179 (526)
Q Consensus 127 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~i~~~~-~~---------------------- 179 (526)
+|++++|++|..+.+++.++++.+++++++++.+....+... ..+.+.+.. ..
T Consensus 84 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (546)
T PRK08314 84 ANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQA 163 (546)
T ss_pred cCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccccccccccccc
Confidence 999999999999999999999999999999998766554321 222222110 00
Q ss_pred -CCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeC
Q 041055 180 -SNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMI 258 (526)
Q Consensus 180 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 258 (526)
....+..+.+...... ..+.....++++++++|||||||.||+|.++|++++..+......+. ..++|++++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~ 238 (546)
T PRK08314 164 LAPGGVVAWKEALAAGL---APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSN--STPESVVLAVL 238 (546)
T ss_pred ccccccccHHHHhcccC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhC--CCCCceEEEEc
Confidence 0012223333322111 11122456789999999999999999999999999988877666655 67899999999
Q ss_pred ChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCC
Q 041055 259 PMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLS 337 (526)
Q Consensus 259 p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~ 337 (526)
|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++. ......++++|.+++||++++
T Consensus 239 p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 239 PLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 9999999978888999999999999999999999999999999999999999998876 334556789999999999999
Q ss_pred HHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecccc
Q 041055 338 KELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTI 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~ 417 (526)
+++.+++.+.+ +.++++.||+||++......... ....+++|.|+++++++|+|++++++++.|+.|||+|+|+++
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~---~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~ 394 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHSNPPD---RPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQV 394 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceecCCCc---CCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCch
Confidence 99999999998 68999999999998765543222 122678999999999999998889999999999999999999
Q ss_pred ccccCCCHHHHhcccC---CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeC
Q 041055 418 MRGYFGNEEATAAAFD---EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLED 494 (526)
Q Consensus 418 ~~gy~~~~~~t~~~~~---~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~ 494 (526)
+.||+++++.+.+.|. .++||+|||+|+++++|.+++.||.||+||++|.+|+|.|||++|.++|+|.+++|++.++
T Consensus 395 ~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~ 474 (546)
T PRK08314 395 FKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPD 474 (546)
T ss_pred hccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCC
Confidence 9999999999998873 3469999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEeCCCC--CCCHHHHHHHHHhcC
Q 041055 495 EEAGQIPMAYVVRAAGS--QLTEDQVMQFVTSQL 526 (526)
Q Consensus 495 ~~~~~~~~a~vv~~~~~--~~~~~~l~~~l~~~l 526 (526)
+..++.++++|++.++. ..++++++++++++|
T Consensus 475 ~~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l 508 (546)
T PRK08314 475 PRRGETVKAVVVLRPEARGKTTEEEIIAWAREHM 508 (546)
T ss_pred cccCceeEEEEEECCCCCCCCCHHHHHHHHHHhc
Confidence 88899999999988764 345688999998875
No 32
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=5.2e-65 Score=542.15 Aligned_cols=473 Identities=19% Similarity=0.210 Sum_probs=371.0
Q ss_pred CCCCCCCChhhhhcccCCCCCCCCCceEEEeCCCC------ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC
Q 041055 42 IPTRTDLDTATCVLSRFPHPDLAESRVALIDSATH------ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL 115 (526)
Q Consensus 42 ~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~ 115 (526)
+-+...+|+.+.++++.....+ +++|++..+.+ +++||+||.+++.++|++|++ +|+++||+|+++++|++
T Consensus 168 wf~g~~ln~~~~~l~~~~~~~p--d~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrVai~~pn~~ 244 (728)
T PLN03052 168 WLPGAVLNVAECCLTPKPSKTD--DSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-LGFEKGDAIAIDMPMNV 244 (728)
T ss_pred ECCCCEeEHHHHHHHHHhccCC--CCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCH
Confidence 3335558888876665223344 79999875432 589999999999999999998 99999999999999999
Q ss_pred chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH---------HHhhc-CCCCEEEEcCCCC-----
Q 041055 116 LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEEL---------QKLTK-VNVPIIVTSRDQS----- 180 (526)
Q Consensus 116 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~-~~~~~i~~~~~~~----- 180 (526)
++++++|||+++|++++|++|.++.+++.+++++++++++|+++... ..+.. ....++++.....
T Consensus 245 e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~ 324 (728)
T PLN03052 245 HAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVK 324 (728)
T ss_pred HHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccc
Confidence 99999999999999999999999999999999999999999986432 11111 1112333322110
Q ss_pred -CCCcchHHHHhhhcCC---CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEE
Q 041055 181 -NNKSVSVEELIECCDA---ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLC 256 (526)
Q Consensus 181 -~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~ 256 (526)
......|.++...... ....+.....++++++|+|||||||.||||+++|.+++..+......++ +.++|+++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~--l~~~d~~~~ 402 (728)
T PLN03052 325 LREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLD--IRKGDIVCW 402 (728)
T ss_pred cccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcC--CCCCcEEEE
Confidence 0112345544332111 0111111235689999999999999999999999998776555444444 678999999
Q ss_pred eCChhHHHHHHHHHHhhcccCcEEEEecC-CCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecC
Q 041055 257 MIPMFHIYGLAFFATGLFCCGVTIVVMQR-FDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAA 334 (526)
Q Consensus 257 ~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~ 334 (526)
..+++|+++. ..++.++..|+++++.+. .++..+++.++++++|++.++|++++.|.+. ..+..++++||.++++|+
T Consensus 403 ~~~l~w~~g~-~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge 481 (728)
T PLN03052 403 PTNLGWMMGP-WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGE 481 (728)
T ss_pred CCCcHHHhHH-HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCC
Confidence 9999999998 667899999999999864 4567899999999999999999999999876 335678899999999999
Q ss_pred CCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCC--cceEEE
Q 041055 335 PLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQ--RGELWL 412 (526)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~--~Gel~v 412 (526)
+++++...++.+.++..++.+.||+||+++.+....... ...++++|.|.+|++++|+| ++|++++.|+ .|||++
T Consensus 482 ~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~--~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v 558 (728)
T PLN03052 482 ASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQ--PQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELAL 558 (728)
T ss_pred CCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCC--CCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEE
Confidence 999999888888875568999999999976544322211 12368899999999999999 6788999985 599999
Q ss_pred ecc--ccccccCCCHHHHhcccC------CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHh-cCCC
Q 041055 413 KSP--TIMRGYFGNEEATAAAFD------EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLL-SHPN 483 (526)
Q Consensus 413 ~~~--~~~~gy~~~~~~t~~~~~------~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~-~~~~ 483 (526)
+++ +...+|+++. .+...|. .+.||+|||++++|+||+++|+||+||+||++|++|+|.|||++|. .||.
T Consensus 559 ~~~~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~ 637 (728)
T PLN03052 559 FPLMFGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADES 637 (728)
T ss_pred eCCCCCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCC
Confidence 875 3345677764 3333442 2339999999999999999999999999999999999999999995 7999
Q ss_pred cccEEEEeeeCCCCC-ceEEEEEEeC--CCCCCCHHHHHHHHHh
Q 041055 484 ILDAAVIPLEDEEAG-QIPMAYVVRA--AGSQLTEDQVMQFVTS 524 (526)
Q Consensus 484 v~~~~vv~~~~~~~~-~~~~a~vv~~--~~~~~~~~~l~~~l~~ 524 (526)
|.|++||+++++..| +.+++||+++ ++...+.++|++++++
T Consensus 638 V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~ 681 (728)
T PLN03052 638 VLETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNS 681 (728)
T ss_pred cceEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 999999999998776 8999999998 6666676777776654
No 33
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-65 Score=549.76 Aligned_cols=449 Identities=21% Similarity=0.308 Sum_probs=372.3
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcC
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLG 128 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 128 (526)
|+.+++... +...+.+|++|+++. +.+||+||.++++++|+.|.+ +|+++|++|+++++|+++++++++||+++|
T Consensus 5 ~~~~~~~~~-a~~~~~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~~~aG 79 (705)
T PRK06060 5 NLAGLLAEQ-ASEAGWYDRPAFYAA---DVVTHGQIHDGAARLGEVLRN-RGLSSGDRVLLCLPDSPDLVQLLLACLARG 79 (705)
T ss_pred CHHHHHHHH-HhhccCCCceEEEec---CceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 677777665 443223389999863 479999999999999999998 999999999999999999999999999999
Q ss_pred CEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCC
Q 041055 129 AILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQD 208 (526)
Q Consensus 129 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (526)
++++|++|.++.+++.+++++++++++|++......+.... ++ .....................++
T Consensus 80 ~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~~~~~~~~~~ 145 (705)
T PRK06060 80 VMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR--VA------------EAAELMSEAARVAPGGYEPMGGD 145 (705)
T ss_pred cEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc--cc------------hhhhhhhhccccCCCCCCCCCCC
Confidence 99999999999999999999999999999876544432110 00 01111110000011111134568
Q ss_pred CEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHh-hhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CC
Q 041055 209 DTAAILYSSGTTGTSKGVILTHANFISIMQLLR-WTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RF 286 (526)
Q Consensus 209 ~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~-~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~ 286 (526)
++++++|||||||.||||+++|+++.+.+.... ..+. ..+.++++...|++|.+++...++.++..|+++++.+ .+
T Consensus 146 ~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~ 223 (705)
T PRK06060 146 ALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALR--LTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPV 223 (705)
T ss_pred CeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhC--CCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCC
Confidence 899999999999999999999999988765543 3344 5678999999999999888667788899999999886 57
Q ss_pred CHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccccee
Q 041055 287 DLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGAT 366 (526)
Q Consensus 287 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 366 (526)
++..++..++++++|+++++|+++..+++... ...++++|.+++||+++++++.+++.+.++++++++.||+||++..+
T Consensus 224 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~-~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 302 (705)
T PRK06060 224 TPEAAAILSARFGPSVLYGVPNFFARVIDSCS-PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTF 302 (705)
T ss_pred CHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc-cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceE
Confidence 88999999999999999999999999987532 34578999999999999999999999999889999999999998655
Q ss_pred ecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEE
Q 041055 367 TFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYF 446 (526)
Q Consensus 367 ~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~ 446 (526)
...... ....+++|+|+++++++|+| ++++++++|+.|||||+|++++.||+++++.+. ..+|||+|||+|++
T Consensus 303 ~~~~~~---~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~ 375 (705)
T PRK06060 303 VSNRVD---EWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCI 375 (705)
T ss_pred EeccCC---CCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEE
Confidence 432211 12267899999999999999 457889999999999999999999999988653 36799999999999
Q ss_pred cCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHH
Q 041055 447 DGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE---DQVMQFVT 523 (526)
Q Consensus 447 ~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~---~~l~~~l~ 523 (526)
++||++++.||.||+||++|++|+|.|||++|.+||.|.+++|+++++...++.+++||++.++...+. ++++++++
T Consensus 376 ~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~ 455 (705)
T PRK06060 376 DSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLL 455 (705)
T ss_pred CCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999888899999999887654443 47888888
Q ss_pred hcC
Q 041055 524 SQL 526 (526)
Q Consensus 524 ~~l 526 (526)
++|
T Consensus 456 ~~L 458 (705)
T PRK06060 456 NRL 458 (705)
T ss_pred HhC
Confidence 765
No 34
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-65 Score=527.75 Aligned_cols=453 Identities=29% Similarity=0.450 Sum_probs=385.7
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcC
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLG 128 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 128 (526)
++.+.+... ++.+| +++|+++. ++.+||+||.++++++|++|.+++|+++|++|+++++|+++++++++||+++|
T Consensus 3 ~~~~~~~~~-a~~~p--~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 77 (496)
T PRK06839 3 GIAYWIEKR-AYLHP--DRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVE 77 (496)
T ss_pred cHHHHHHHH-HHHCC--CCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 355666666 66666 79999974 78999999999999999999755799999999999999999999999999999
Q ss_pred CEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC----CC-CEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCC
Q 041055 129 AILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV----NV-PIIVTSRDQSNNKSVSVEELIECCDAADELPGC 203 (526)
Q Consensus 129 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (526)
++++|+++.++.+++..+++.++++++++++.....+... .. ..+.+. ++.+..... .....
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~~~ 144 (496)
T PRK06839 78 CIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISIT---------SLKEIEDRK----IDNFV 144 (496)
T ss_pred cEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEec---------chHhhhccC----CCCCC
Confidence 9999999999999999999999999999998765544321 11 122221 111111111 11111
Q ss_pred CCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 204 QLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 204 ~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
...++++++++|||||||.||+|.++|.++..........+. ...+++++..+|++|.+|+....+.++..|+++++.
T Consensus 145 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 222 (496)
T PRK06839 145 EKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAID--LTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVP 222 (496)
T ss_pred CCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcC--CCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEc
Confidence 345688999999999999999999999998766554444444 678999999999999999877778899999999999
Q ss_pred cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccc
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTES 362 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~ 362 (526)
+.++++.+++.++++++|++.++|++++.+++. .....+++++|.+++||+++++++.+.+.+. ++++.+.||+||+
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~ 300 (496)
T PRK06839 223 RKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTET 300 (496)
T ss_pred cCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCC
Confidence 899999999999999999999999999999887 3345678899999999999999999999886 7899999999999
Q ss_pred cceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccc
Q 041055 363 CGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGD 442 (526)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD 442 (526)
+..+........ ....+++|+|.++++++|+|++ +..++.|+.|||+|+|+.++.||+++++.+...+ .+|||+|||
T Consensus 301 ~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD 377 (496)
T PRK06839 301 SPTVFMLSEEDA-RRKVGSIGKPVLFCDYELIDEN-KNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGD 377 (496)
T ss_pred CcceEecccccc-cccCCCCcccCCCceEEEECCC-cCCCCCCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecc
Confidence 875544332222 2237899999999999999954 5569999999999999999999999999999887 589999999
Q ss_pred eEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHH
Q 041055 443 LCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFV 522 (526)
Q Consensus 443 ~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l 522 (526)
+++++++|++++.||.+|+||.+|.+|+|.+||++|.++|+|.+++|++++++..|+.++++|+++++...+++++++++
T Consensus 378 l~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~ 457 (496)
T PRK06839 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVIEHC 457 (496)
T ss_pred eEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999899999999999988888889999999
Q ss_pred HhcC
Q 041055 523 TSQL 526 (526)
Q Consensus 523 ~~~l 526 (526)
+++|
T Consensus 458 ~~~l 461 (496)
T PRK06839 458 RLFL 461 (496)
T ss_pred HhhC
Confidence 8865
No 35
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.1e-65 Score=541.55 Aligned_cols=471 Identities=22% Similarity=0.233 Sum_probs=374.2
Q ss_pred CCCCCCCCChhhhhcccCCCCCCCCCceEEEeCC---CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCch
Q 041055 41 RIPTRTDLDTATCVLSRFPHPDLAESRVALIDSA---THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLY 117 (526)
Q Consensus 41 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~---~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~ 117 (526)
.+.....+|+.+.+.++ ..+ +++|++..+ ..+++||+||.+++.++|++|.+ +|+++||+|+++++|++++
T Consensus 79 ~wf~~~~~n~~~~~~~~---~~~--~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~ 152 (655)
T PRK03584 79 RWFPGARLNYAENLLRH---RRD--DRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-LGVGPGDRVAAYLPNIPET 152 (655)
T ss_pred eeCCCCEeeHHHHhhcc---CCC--CCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHH
Confidence 44445557888877654 233 789998642 23689999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH---------HHhh----cC-CCC-EEEEcCCC---
Q 041055 118 PSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEEL---------QKLT----KV-NVP-IIVTSRDQ--- 179 (526)
Q Consensus 118 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~~-~~~-~i~~~~~~--- 179 (526)
++++|||+++|++++|+++.++.+++.+++++++++++|+++... ..+. .. ... ++++....
T Consensus 153 v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 232 (655)
T PRK03584 153 VVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAA 232 (655)
T ss_pred HHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcc
Confidence 999999999999999999999999999999999999999976421 1111 11 112 33332211
Q ss_pred ---CCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHH-HHHHhhhhcccCCCCcEEE
Q 041055 180 ---SNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISI-MQLLRWTVDVTHAQNDIFL 255 (526)
Q Consensus 180 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~-~~~~~~~~~~~~~~~~~~l 255 (526)
.......+.++...... .........++++++|+|||||||.||||+++|++++.. .......+. +.++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~--~~~~d~~~ 309 (655)
T PRK03584 233 AAAALPGALLWEDFLAPAEA-AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCD--LGPGDRFF 309 (655)
T ss_pred cccccCCcccHHHHhhcccc-CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcC--CCCCCEEE
Confidence 11123344444331111 111122456789999999999999999999999987643 444444444 67889999
Q ss_pred EeCChhHHHHHHHHHHhhcccCcEEEEecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceE
Q 041055 256 CMIPMFHIYGLAFFATGLFCCGVTIVVMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRR 328 (526)
Q Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~ 328 (526)
+..++.|+.+. .++.+++.|+++++.+. .++..+++.++++++|++.++|++++.+.+.. ....++++||.
T Consensus 310 ~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~ 387 (655)
T PRK03584 310 WYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRT 387 (655)
T ss_pred EcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEE
Confidence 99999887553 35678899999998752 58999999999999999999999999988752 23467899999
Q ss_pred EEEecCCCCHHHHHHHHHhC-CCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCc
Q 041055 329 VGSGAAPLSKELADEFRAKF-PWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQR 407 (526)
Q Consensus 329 v~~gG~~l~~~~~~~~~~~~-~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~ 407 (526)
+++||+++++++.+++.+.+ +++.+.+.||+||+++.+....... ...++++|.|.+|++++|+| ++++++ .|+.
T Consensus 388 i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~--~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~ 463 (655)
T PRK03584 388 IGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLL--PVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEV 463 (655)
T ss_pred EEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCC--CcCCCccCCCcCCceeEEEC-CCCCCC-CCCc
Confidence 99999999999999999998 4688999999999865433222111 12368899999999999999 567777 7999
Q ss_pred ceEEEecc--ccccccCCCHHHHh--cc-c-CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcC
Q 041055 408 GELWLKSP--TIMRGYFGNEEATA--AA-F-DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSH 481 (526)
Q Consensus 408 Gel~v~~~--~~~~gy~~~~~~t~--~~-~-~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~ 481 (526)
|||+|+|| +++.|||++++.++ .. | ..+|||+|||+|++|+||+++|+||+||+||++|++|+|.|||++|.+|
T Consensus 464 GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~ 543 (655)
T PRK03584 464 GELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEAL 543 (655)
T ss_pred eEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhC
Confidence 99999995 79999999987543 12 2 1257999999999999999999999999999999999999999999999
Q ss_pred CCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhcC
Q 041055 482 PNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE---DQVMQFVTSQL 526 (526)
Q Consensus 482 ~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~---~~l~~~l~~~l 526 (526)
|.|.+|+|++++++..++.+++||+++++...++ ++|+++++++|
T Consensus 544 p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L 591 (655)
T PRK03584 544 PEVLDSLVIGQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNL 591 (655)
T ss_pred CCcceEEEEeeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhC
Confidence 9999999999999989999999999998766554 57888888765
No 36
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-64 Score=530.38 Aligned_cols=472 Identities=27% Similarity=0.411 Sum_probs=394.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|++..+.++.+||+||.+++.++|.+|.+ .|+++|++|+++++|++++++++|||+++
T Consensus 18 ~~l~~~l~~~-~~~~p--~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~~a~~~~ 93 (558)
T PRK12583 18 QTIGDAFDAT-VARFP--DREALVVRHQALRYTWRQLADAVDRLARGLLA-LGVQPGDRVGIWAPNCAEWLLTQFATARI 93 (558)
T ss_pred CcHHHHHHHH-HHHCC--CCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHHHHhh
Confidence 5688888777 56666 79999886667899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH-----HHhh----c-----------CCCC---EEEEcCCCCCCCc
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEEL-----QKLT----K-----------VNVP---IIVTSRDQSNNKS 184 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~----~-----------~~~~---~i~~~~~~~~~~~ 184 (526)
|++++|+++.++.+++.+++++++++++|+++... ..+. . ...+ .++..........
T Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (558)
T PRK12583 94 GAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPGF 173 (558)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCccc
Confidence 99999999999999999999999999999976421 1110 0 0011 1111111111222
Q ss_pred chHHHHhhhcCCC----CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCCh
Q 041055 185 VSVEELIECCDAA----DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPM 260 (526)
Q Consensus 185 ~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~ 260 (526)
..+.+........ .........++++++++|||||||.||+|.++|+++.+.+......++ +.++|++++.+|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~~~~~p~ 251 (558)
T PRK12583 174 LAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLG--LTEHDRLCVPVPL 251 (558)
T ss_pred cchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhC--CCCCCeEEEecCc
Confidence 2333322111110 011111345788999999999999999999999999888877766665 6789999999999
Q ss_pred hHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCH
Q 041055 261 FHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSK 338 (526)
Q Consensus 261 ~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~ 338 (526)
+|.+|....++.++..|+++++. ..+++..+++.++++++|+++++|+++..+++. .....+++++|.+++||+++++
T Consensus 252 ~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~ 331 (558)
T PRK12583 252 YHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPI 331 (558)
T ss_pred hhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCH
Confidence 99999988888999999999865 467899999999999999999999999888876 3344678999999999999999
Q ss_pred HHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccc
Q 041055 339 ELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIM 418 (526)
Q Consensus 339 ~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~ 418 (526)
++.+++.+.++...+.+.||+||++.+++............+++|+|.+++.++|+|++ +.+++.|+.|||+++|+.++
T Consensus 332 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~ 410 (558)
T PRK12583 332 EVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVM 410 (558)
T ss_pred HHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccc
Confidence 99999999997778999999999998766544322222236899999999999999976 88999999999999999999
Q ss_pred cccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCC
Q 041055 419 RGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAG 498 (526)
Q Consensus 419 ~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~ 498 (526)
.||+++++.+...|+.++||+|||+|++++||++++.||.||+||++|.+|+|.+||++|.++|.|.+++|++++++..+
T Consensus 411 ~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~ 490 (558)
T PRK12583 411 KGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYG 490 (558)
T ss_pred hhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCC
Confidence 99999999999988889999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 499 QIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 499 ~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+.++++|+..++...+.++++++++++|
T Consensus 491 ~~~~~~v~~~~~~~~~~~~i~~~~~~~L 518 (558)
T PRK12583 491 EEIVAWVRLHPGHAASEEELREFCKARI 518 (558)
T ss_pred cEEEEEEEECCCCCCCHHHHHHHHHhhc
Confidence 9999999998877778889999998875
No 37
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.1e-64 Score=537.55 Aligned_cols=469 Identities=20% Similarity=0.211 Sum_probs=366.8
Q ss_pred CCCCCCCChhhhhcccCCCCCCCCCceEEEeCC---CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchH
Q 041055 42 IPTRTDLDTATCVLSRFPHPDLAESRVALIDSA---THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYP 118 (526)
Q Consensus 42 ~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~---~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~ 118 (526)
+.....+|+.+.+.+. . + +++|++..+ ..+++||+||.+++.++|++|.+ +|+++||+|+++++|+++++
T Consensus 81 wf~~~~~n~~~~~~~~-~---~--~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~~n~~e~~ 153 (652)
T TIGR01217 81 WFPGARLNYAENLLRA-A---G--TEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-LGVRPGDRVSGYLPNIPQAV 153 (652)
T ss_pred ECCCCeeeHHHHHhcc-C---C--CCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 3335568888877764 2 2 577776532 23689999999999999999988 99999999999999999999
Q ss_pred HHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH---------HHhh----cC-CCC-EEEEcCCCC---
Q 041055 119 SICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEEL---------QKLT----KV-NVP-IIVTSRDQS--- 180 (526)
Q Consensus 119 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~----~~-~~~-~i~~~~~~~--- 180 (526)
+++|||+++|++++|+++.++.+++.+++++++++++|+++... ..+. .. ..+ ++++.....
T Consensus 154 ~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 233 (652)
T TIGR01217 154 VAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRET 233 (652)
T ss_pred HHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccc
Confidence 99999999999999999999999999999999999999976431 1111 11 112 333321100
Q ss_pred ----CCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHH-HHHHHhhhhcccCCCCcEEE
Q 041055 181 ----NNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFIS-IMQLLRWTVDVTHAQNDIFL 255 (526)
Q Consensus 181 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~-~~~~~~~~~~~~~~~~~~~l 255 (526)
......+.++...... .........++++++|+|||||||.||||+++|++++. ........++ +.++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~--~~~~d~~~ 310 (652)
T TIGR01217 234 EAPKIDGALDLEDFTAAAQA-AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCD--LGPGDRLF 310 (652)
T ss_pred ccccccCcccHHHHHhcccC-CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccC--CCCCcEEE
Confidence 0122334444322111 11111234568999999999999999999999998654 3333333444 67899999
Q ss_pred EeCChhHHHHHHHHHHhhcccCcEEEEecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhh---ccCCCCCCCceE
Q 041055 256 CMIPMFHIYGLAFFATGLFCCGVTIVVMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKY---CKDSSYLTSLRR 328 (526)
Q Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~---~~~~~~l~~lr~ 328 (526)
+..|+.|+.+. .++.++..|+++++.+. .++..++++++++++|++...|.+++.+.+. .....++++||.
T Consensus 311 ~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~ 388 (652)
T TIGR01217 311 YYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQC 388 (652)
T ss_pred EeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeE
Confidence 99999998643 34578999999999852 3788999999999999998777777666553 123567899999
Q ss_pred EEEecCCCCHHHHHHHHHhCC-CCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCc
Q 041055 329 VGSGAAPLSKELADEFRAKFP-WVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQR 407 (526)
Q Consensus 329 v~~gG~~l~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~ 407 (526)
+++||+++++++.+++.+.++ +..+.+.||+||+++......+. . ....+++|.|.+|++++|+| ++|+++ +|+.
T Consensus 389 i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~-~-~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~ 464 (652)
T TIGR01217 389 VASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPT-L-PVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEV 464 (652)
T ss_pred EEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCC-C-CCcCCccCCCcCCCceEEEC-CCCCCC-CCCc
Confidence 999999999999999999884 35678999999975433322111 1 12268899999999999999 567777 5999
Q ss_pred ceEEEecc--ccccccCCCHHHHh--cc-cC-CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcC
Q 041055 408 GELWLKSP--TIMRGYFGNEEATA--AA-FD-EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSH 481 (526)
Q Consensus 408 Gel~v~~~--~~~~gy~~~~~~t~--~~-~~-~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~ 481 (526)
|||+++|| +++.|||+|++.++ +. |. .+|||+|||+|++|+||+|+++||+||+||++|++|+|.|||++|.+|
T Consensus 465 GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~ 544 (652)
T TIGR01217 465 GELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERL 544 (652)
T ss_pred cEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhC
Confidence 99999996 68999999998654 22 32 368999999999999999999999999999999999999999999999
Q ss_pred CCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhcC
Q 041055 482 PNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE---DQVMQFVTSQL 526 (526)
Q Consensus 482 ~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~---~~l~~~l~~~l 526 (526)
|.|.|++|++++++..|+.++|||+++++...++ ++|+++++++|
T Consensus 545 p~V~eaavvg~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l 592 (652)
T TIGR01217 545 DEVRESLCIGQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGL 592 (652)
T ss_pred CCcceEEEEeeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999998876654 57888888765
No 38
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-64 Score=524.20 Aligned_cols=468 Identities=31% Similarity=0.487 Sum_probs=398.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..+ +++|+++. ++++||+||.+++.++|..|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 5 ~~i~~~l~~~-~~~~~--~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~g~~V~l~~~~~~~~~~~~la~~~~ 78 (513)
T PRK07656 5 MTLPELLARA-ARRFG--DKEAYVFG--DQRLTYAELNARVRRAAAALAA-LGIGKGDRVAIWAPNSPHWVIAALGALKA 78 (513)
T ss_pred ccHHHHHHHH-HHHCC--CCeEEEeC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 4677777766 55666 79999984 6899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc-----CCCCEE-EEcCCCCC---CCcchHHHHhhhcCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK-----VNVPII-VTSRDQSN---NKSVSVEELIECCDAAD 198 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-----~~~~~i-~~~~~~~~---~~~~~~~~~~~~~~~~~ 198 (526)
|++++|+++..+.+++..+++++++++++++......... .....+ ........ ....++.++......
T Consensus 79 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 156 (513)
T PRK07656 79 GAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDP-- 156 (513)
T ss_pred CeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCC--
Confidence 9999999999999999999999999999998876554331 122222 22221111 012334444332211
Q ss_pred CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCc
Q 041055 199 ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGV 278 (526)
Q Consensus 199 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~ 278 (526)
..+.....++++++++|||||||.||+|.++|+++...+......+. ..+++++++.+|++|.+++...++.++..|+
T Consensus 157 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (513)
T PRK07656 157 AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLG--LTEGDRYLAANPFFHVFGYKAGVNAPLMRGA 234 (513)
T ss_pred CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhC--CCCCCeEEEccchHHHHHHHHHHHHHHHcCc
Confidence 11222457789999999999999999999999999888877666665 6789999999999999998777889999999
Q ss_pred EEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 279 TIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 279 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
++++.+.++++.+++.++++++|++.++|+++..+++. ......++++|.+++||+++++++.+.+++.++...+++.|
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~Y 314 (513)
T PRK07656 235 TILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGY 314 (513)
T ss_pred eEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEE
Confidence 99998889999999999999999999999999999987 33445788999999999999999999999999433899999
Q ss_pred ccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCe
Q 041055 358 GLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGW 437 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~ 437 (526)
|+||++++++.+.........++++|.|.++++++|+| +++.+++.|+.|||+++|+.++.||++++..+...+..+||
T Consensus 315 G~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~ 393 (513)
T PRK07656 315 GLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGW 393 (513)
T ss_pred ccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCc
Confidence 99999887776544332222267899999999999999 56889999999999999999999999999999999977999
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHH
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQ 517 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~ 517 (526)
|+|||+|+++++|.++++||.||+||++|.+++|.+||++|.++++|.+++|++.+++..|+.++++|+.+++...+.++
T Consensus 394 ~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~ 473 (513)
T PRK07656 394 LHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELTEEE 473 (513)
T ss_pred eeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999998777788889
Q ss_pred HHHHHHhcC
Q 041055 518 VMQFVTSQL 526 (526)
Q Consensus 518 l~~~l~~~l 526 (526)
++++++++|
T Consensus 474 l~~~~~~~l 482 (513)
T PRK07656 474 LIAYCREHL 482 (513)
T ss_pred HHHHHHhhc
Confidence 999998865
No 39
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-65 Score=529.91 Aligned_cols=468 Identities=26% Similarity=0.376 Sum_probs=381.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
-++.+.+... +++++ +++|+++.+..+.+||+||.++++++|++|.+ +|+++||+|+++++|++++++++|||+++
T Consensus 16 ~~l~~~l~~~-a~~~p--~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 91 (534)
T PRK05852 16 PRIADLVEVA-ATRLP--EAPALVVTADRIAISYRDLARLVDDLAGQLTR-SGLLPGDRVALRMGSNAEFVVALLAASRA 91 (534)
T ss_pred ccHHHHHHHH-HHhCC--CCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 4677887766 66666 79999886556789999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC---CCCE-EEEcCCC-CCCCcchHHHHhhhcCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV---NVPI-IVTSRDQ-SNNKSVSVEELIECCDAADELPG 202 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~-i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 202 (526)
|++++|++|.++.+++.++++.++++++|++.......... ..+. +.+.... ......... .............
T Consensus 92 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 170 (534)
T PRK05852 92 DLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVH-LDAATEPTPATST 170 (534)
T ss_pred CcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccc-cccccCCCccccc
Confidence 99999999999999999999999999999876433211110 1111 1111111 000100000 0000000000111
Q ss_pred CCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEE
Q 041055 203 CQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVV 282 (526)
Q Consensus 203 ~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 282 (526)
.....++.++++|||||||.||+|.++|+++...+......+. +.++|++++.+|++|.+++...++.++..|+++++
T Consensus 171 ~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~--~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~ 248 (534)
T PRK05852 171 PEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYR--LSPRDATVAVMPLYHGHGLIAALLATLASGGAVLL 248 (534)
T ss_pred cCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhC--CCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEe
Confidence 1222467899999999999999999999999988877766665 67899999999999999997788899999999888
Q ss_pred ec--CCCHHHHHHHHHhcCccEeecccHHHHHHHhhccC---CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 283 MQ--RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD---SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 283 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
.. .+++..+++.++++++|+++++|+++..+.+.... ...++++|.++++|+++++++.+.+.+.+ +.++++.|
T Consensus 249 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~Y 327 (534)
T PRK05852 249 PARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAF 327 (534)
T ss_pred CCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhcc
Confidence 54 57899999999999999999999999999886322 34578999999999999999999999998 78999999
Q ss_pred ccccccceeecccCcc-----cccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhccc
Q 041055 358 GLTESCGATTFMVSPK-----QARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAF 432 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~ 432 (526)
|+||++..++...... ......+..|. .++++++++| ++++++++|+.|||+|+|+.+++||+++++.+.+.|
T Consensus 328 G~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~ 405 (534)
T PRK05852 328 GMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF 405 (534)
T ss_pred CccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhh
Confidence 9999987655432210 01111344444 6999999999 457889999999999999999999999999999988
Q ss_pred CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC
Q 041055 433 DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ 512 (526)
Q Consensus 433 ~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~ 512 (526)
.+|||+|||+|++|+||++++.||.+|+||.+|.+|+|.+||++|.++|+|.+|+|++.+++..++.++++|++.++..
T Consensus 406 -~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~ 484 (534)
T PRK05852 406 -TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAP 484 (534)
T ss_pred -cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCC
Confidence 5789999999999999999999999999999999999999999999999999999999999888999999999887766
Q ss_pred CCHHHHHHHHHhcC
Q 041055 513 LTEDQVMQFVTSQL 526 (526)
Q Consensus 513 ~~~~~l~~~l~~~l 526 (526)
.+.+++.++++++|
T Consensus 485 ~~~~~i~~~~~~~l 498 (534)
T PRK05852 485 PTAEELVQFCRERL 498 (534)
T ss_pred CCHHHHHHHHHHhc
Confidence 78899999999875
No 40
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.6e-65 Score=541.89 Aligned_cols=456 Identities=21% Similarity=0.311 Sum_probs=368.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCC-------CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSA-------THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
.|+.+.+... ++..+ +++|+++.+ ..+.+||+||.+++.++|++|.+ . +++||+|+++++|+++|+++
T Consensus 21 ~~l~~~l~~~-a~~~~--~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~-~~~gd~V~i~~~n~~e~~~~ 95 (631)
T PRK07769 21 TNLVRHVERW-AKVRG--DKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ-V-TKPGDRVAILAPQNLDYLIA 95 (631)
T ss_pred CCHHHHHHHH-HHhCC--CCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEEcCCChHHHHH
Confidence 6788888766 55566 789988631 23689999999999999999987 5 89999999999999999999
Q ss_pred HHHHHHcCCEEccC-CCCCC--HHHHHHHHHhcCCeEEEEcchhHHHhhc----C---CC-CEEEEcCCCCCCCcchHHH
Q 041055 121 CLAIFSLGAILSPA-NSINT--ESEIVKQVRDSGAKLIISASEELQKLTK----V---NV-PIIVTSRDQSNNKSVSVEE 189 (526)
Q Consensus 121 ~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~---~~-~~i~~~~~~~~~~~~~~~~ 189 (526)
+|||+++|++++|+ ++..+ .+++.+++++++++++|++.+....+.. . .. .++.++... +
T Consensus 96 ~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 166 (631)
T PRK07769 96 FFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVP---------D 166 (631)
T ss_pred HHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccc---------c
Confidence 99999999999999 45554 6889999999999999998875544321 1 11 122221100 0
Q ss_pred HhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHH
Q 041055 190 LIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFF 269 (526)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 269 (526)
.. . .........++++++|+|||||||.||||++||+++...+......++ ..++++++..+|++|.+|+. .
T Consensus 167 ~~----~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~Pl~h~~gl~-~ 238 (631)
T PRK07769 167 EV----G-ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALE--GQEGDRGVSWLPFFHDMGLI-T 238 (631)
T ss_pred cc----c-cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcC--CCCcceEEEeCCCcCchhhH-H
Confidence 00 0 001111346789999999999999999999999999987776666555 67889999999999999994 4
Q ss_pred HHhhcccCcEEEEecC--C--CHHHHHHHHHhcCc---cEeecccHHHHHHHhh---cc---CCCCCCCceEEEEecCCC
Q 041055 270 ATGLFCCGVTIVVMQR--F--DLQAMIEAIKTYQV---NNIPLVPPVILGLVKY---CK---DSSYLTSLRRVGSGAAPL 336 (526)
Q Consensus 270 ~~~~l~~G~~~v~~~~--~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~---~~---~~~~l~~lr~v~~gG~~l 336 (526)
.+.+++.|+++++..+ + ++..+++.++++++ +++..+|+++..++.. .. ...+++++|.+++||+++
T Consensus 239 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l 318 (631)
T PRK07769 239 VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPV 318 (631)
T ss_pred HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCC
Confidence 4556677888887752 4 88999999999886 7899999988777653 11 145789999999999999
Q ss_pred CHHHHHHHHHhCC-----CCceeeccccccccceeecccCcccc------------------------cCCCCcccccCC
Q 041055 337 SKELADEFRAKFP-----WVELRQGYGLTESCGATTFMVSPKQA------------------------RARSGSCGALSP 387 (526)
Q Consensus 337 ~~~~~~~~~~~~~-----~~~l~~~yG~tE~~~~~~~~~~~~~~------------------------~~~~~~~G~~~~ 387 (526)
++++.++|.+.|+ ...+++.||+||++..++........ .....++|+|.+
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~ 398 (631)
T PRK07769 319 SPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGV 398 (631)
T ss_pred CHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCC
Confidence 9999999999873 34699999999997665543211100 001257999999
Q ss_pred CcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC-----------------CCeeeccceEEEcCCC
Q 041055 388 TFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE-----------------DGWLKTGDLCYFDGEG 450 (526)
Q Consensus 388 ~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~-----------------~~~~~TGD~~~~~~~G 450 (526)
+..++|+|++++++++.|+.|||+|+||+++.|||++++.|++.|.. +|||+|||+|+++ ||
T Consensus 399 ~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG 477 (631)
T PRK07769 399 SEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DG 477 (631)
T ss_pred CcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CC
Confidence 99999999888999999999999999999999999999999998842 4899999999995 99
Q ss_pred cEEEEccccceEEecCeeeChHHHHHHHhc-CCCccc--EEEEeeeC-------------------CCCCceEEEEEEeC
Q 041055 451 FLYIVDRIKELIKHNGYQVAPAELEAVLLS-HPNILD--AAVIPLED-------------------EEAGQIPMAYVVRA 508 (526)
Q Consensus 451 ~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~-~~~v~~--~~vv~~~~-------------------~~~~~~~~a~vv~~ 508 (526)
+|+|+||.||+||++|++|+|.|||++|.+ ||.|.+ ++|+++++ +..|+.++++|++.
T Consensus 478 ~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~ 557 (631)
T PRK07769 478 ELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERA 557 (631)
T ss_pred EEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEec
Confidence 999999999999999999999999999996 899998 99999998 55789999999998
Q ss_pred CCC-CCCHHHHHHHHHhcC
Q 041055 509 AGS-QLTEDQVMQFVTSQL 526 (526)
Q Consensus 509 ~~~-~~~~~~l~~~l~~~l 526 (526)
++. ..+.++|+++++++|
T Consensus 558 ~~~~~~~~~~l~~~~~~~l 576 (631)
T PRK07769 558 PGAHKLDPQPIADDIRAAI 576 (631)
T ss_pred CccccccHHHHHHHHHHHH
Confidence 873 567889999998764
No 41
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-64 Score=529.76 Aligned_cols=469 Identities=30% Similarity=0.426 Sum_probs=390.4
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|+++. ++.+||.||.++++++|+.|.+ +|+++||+|+++++|+++|+++++||+++
T Consensus 32 ~~l~~~~~~~-~~~~p--~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~~~~ 105 (573)
T PRK05605 32 TTLVDLYDNA-VARFG--DRPALDFF--GATTTYAELGKQVRRAAAGLRA-LGVRPGDRVAIVLPNCPQHIVAFYAVLRL 105 (573)
T ss_pred CCHHHHHHHH-HHHCC--CCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 5788888776 55666 79999873 6789999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc----CCCCE-EEEcCCC-----------------------
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK----VNVPI-IVTSRDQ----------------------- 179 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~-i~~~~~~----------------------- 179 (526)
|++++|++|.++.+++.+++++++++++|+++.....+.. ..... +.++...
T Consensus 106 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (573)
T PRK05605 106 GAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAA 185 (573)
T ss_pred CcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeecccccccccccccccccccccccccc
Confidence 9999999999999999999999999999998775544321 12222 2221100
Q ss_pred ---CCCCcchHHHHhhhcCCC--CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEE
Q 041055 180 ---SNNKSVSVEELIECCDAA--DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIF 254 (526)
Q Consensus 180 ---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~ 254 (526)
.......+.++....... .........++++++++|||||||.||+|.++|+++...+......+.......+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 265 (573)
T PRK05605 186 LTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERV 265 (573)
T ss_pred cccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEE
Confidence 001222333332211110 001112356789999999999999999999999999877654433221112347899
Q ss_pred EEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEec
Q 041055 255 LCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGA 333 (526)
Q Consensus 255 l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG 333 (526)
+..+|++|.+|+...++.++..|+++++.+.++++.+++.++++++|++.++|++++.|++. ......++++|.+++||
T Consensus 266 ~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg 345 (573)
T PRK05605 266 LAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGA 345 (573)
T ss_pred EEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECC
Confidence 99999999999877777888999999999889999999999999999999999999999986 44456788999999999
Q ss_pred CCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCC-CccCCCCCcceEEE
Q 041055 334 APLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTET-RLALPPYQRGELWL 412 (526)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~-~~~~~~g~~Gel~v 412 (526)
+++++++.+.+.+.+ +..+++.||+||+++++....... ...++++|+|.+++.++|+|+++ +.+++.|+.|||++
T Consensus 346 ~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v 422 (573)
T PRK05605 346 MALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMSD--DRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLV 422 (573)
T ss_pred CcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCccc--CCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEE
Confidence 999999999999887 688999999999987665433221 12267999999999999999776 68899999999999
Q ss_pred eccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEee
Q 041055 413 KSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPL 492 (526)
Q Consensus 413 ~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~ 492 (526)
+|+.++.||+++++.+.+.| .+|||+|||+|+++++|++++.||.||++|.+|++|+|.+||+++.+++.|.+++|++.
T Consensus 423 ~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~~ 501 (573)
T PRK05605 423 RGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVGL 501 (573)
T ss_pred ecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEee
Confidence 99999999999999999998 46799999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 493 EDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 493 ~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
++...++.++++|++.++...+.++|+++++++|
T Consensus 502 ~~~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l 535 (573)
T PRK05605 502 PREDGSEEVVAAVVLEPGAALDPEGLRAYCREHL 535 (573)
T ss_pred ecccCCeEEEEEEEECCCCCCCHHHHHHHHHHhC
Confidence 9988889999999999887788899999998865
No 42
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.3e-64 Score=528.73 Aligned_cols=472 Identities=29% Similarity=0.426 Sum_probs=396.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++.++ +++|+++.+.++.+||+||.+++.++|..|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 16 ~~l~~~l~~~-~~~~~--~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 91 (559)
T PRK08315 16 QTIGQLLDRT-AARYP--DREALVYRDQGLRWTYREFNEEVDALAKGLLA-LGIEKGDRVGIWAPNVPEWVLTQFATAKI 91 (559)
T ss_pred ccHHHHHHHH-HHHCC--CCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 6788888776 56666 79999987667899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHH-----Hhhc----C--------------CC-CEEEEcCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQ-----KLTK----V--------------NV-PIIVTSRDQSNNK 183 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~----~--------------~~-~~i~~~~~~~~~~ 183 (526)
|++++|++|..+.+++.++++.+++++++++..... .+.. . .. .++..+.. ....
T Consensus 92 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 170 (559)
T PRK08315 92 GAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE-KHPG 170 (559)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeeccc-CCcc
Confidence 999999999999999999999999999999865321 1110 0 00 12222211 1122
Q ss_pred cchHHHHhhhcCCC--C--CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCC
Q 041055 184 SVSVEELIECCDAA--D--ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIP 259 (526)
Q Consensus 184 ~~~~~~~~~~~~~~--~--~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p 259 (526)
...+.++....... . ..+.....++++++++|||||||.||+|.++|+++...+......+. +.++++++..+|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~~~~~p 248 (559)
T PRK08315 171 MLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMK--LTEEDRLCIPVP 248 (559)
T ss_pred cccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcC--CCCCceEEEecC
Confidence 23333332211100 0 11111345788999999999999999999999999888777766665 678999999999
Q ss_pred hhHHHHHHHHHHhhcccCcEEEE-ecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCC
Q 041055 260 MFHIYGLAFFATGLFCCGVTIVV-MQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLS 337 (526)
Q Consensus 260 ~~~~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~ 337 (526)
++|.+|+...++.++..|+++++ ...+++..+++.++++++|++.++|+++..++.. ......++++|.+++||++++
T Consensus 249 ~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~ 328 (559)
T PRK08315 249 LYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCP 328 (559)
T ss_pred cHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCC
Confidence 99999997788899999999984 4568999999999999999999999999988876 334567889999999999999
Q ss_pred HHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecccc
Q 041055 338 KELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTI 417 (526)
Q Consensus 338 ~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~ 417 (526)
+++.+.+.+.++..++++.||+||++.+++.............++|+|.++++++|+|++++++++.|+.|||+|+|+++
T Consensus 329 ~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~ 408 (559)
T PRK08315 329 IEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSV 408 (559)
T ss_pred HHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchh
Confidence 99999999999666799999999998766554333222223689999999999999998879999999999999999999
Q ss_pred ccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCC
Q 041055 418 MRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEA 497 (526)
Q Consensus 418 ~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~ 497 (526)
+.||+++++.++..|..++||+|||++++++||.++++||.||++|++|++|+|.|||++|.++|+|.+++|++.+++..
T Consensus 409 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~ 488 (559)
T PRK08315 409 MKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVGVPDEKY 488 (559)
T ss_pred hhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEecCCCCC
Confidence 99999999999999988999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 498 GQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 498 ~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
++.++++|++.++...+.++++++++++|
T Consensus 489 ~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 517 (559)
T PRK08315 489 GEEVCAWIILRPGATLTEEDVRDFCRGKI 517 (559)
T ss_pred CeEEEEEEEeCCCCCCCHHHHHHHHHhhc
Confidence 89999999998877778889999998764
No 43
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-64 Score=517.74 Aligned_cols=446 Identities=21% Similarity=0.314 Sum_probs=374.8
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcC
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLG 128 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 128 (526)
++.+.+.+. ++..| +++|+++. ++++||.||.+++.++|++|.+ .| .+|++|+|+++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~-a~~~p--~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~~-~~~~~v~i~~~~~~~~~~~~la~~~~G 74 (487)
T PRK07638 2 GITKEYKKH-ASLQP--NKIAIKEN--DRVLTYKDWFESVCKVANWLNE-KE-SKNKTIAILLENRIEFLQLFAGAAMAG 74 (487)
T ss_pred ChHHHHHHH-HHhCC--CCeEEecC--CcEeeHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 355666665 55666 79999974 6899999999999999999988 77 489999999999999999999999999
Q ss_pred CEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCC
Q 041055 129 AILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQD 208 (526)
Q Consensus 129 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (526)
++++|+++.++.+++.++++.+++++++++......+.....+++.++. +.+....... ...+ .....+
T Consensus 75 ~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~-~~~~~~ 143 (487)
T PRK07638 75 WTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEIDE---------WKRMIEKYLP-TYAP-IENVQN 143 (487)
T ss_pred eEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEehh---------hhhhhhhccc-cccc-cccCCC
Confidence 9999999999999999999999999999998655544332333333221 1111111111 1111 122346
Q ss_pred CEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCH
Q 041055 209 DTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDL 288 (526)
Q Consensus 209 ~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~ 288 (526)
++++++|||||||.||+|+++|+++...+......+. ..++|+++...|++|..++ ..++.++..|+++++.+.+++
T Consensus 144 ~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~~~~ 220 (487)
T PRK07638 144 APFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFH--MKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRKFIP 220 (487)
T ss_pred CcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC--cCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCCCCH
Confidence 7899999999999999999999999888777666555 6789999999999998877 677889999999999999999
Q ss_pred HHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeec
Q 041055 289 QAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTF 368 (526)
Q Consensus 289 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~ 368 (526)
..+++.++++++|++.++|+++..|.+.. ....+.+.++++|+++++++.+++.+.+|++.+++.||+||++.++..
T Consensus 221 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~ 297 (487)
T PRK07638 221 NQVLDKLETENISVMYTVPTMLESLYKEN---RVIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTAL 297 (487)
T ss_pred HHHHHHHHHcCCeEEEeCcHHHHHHHhCc---CcCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEe
Confidence 99999999999999999999999998762 223456677889999999999999999999999999999999876654
Q ss_pred ccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcC
Q 041055 369 MVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDG 448 (526)
Q Consensus 369 ~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~ 448 (526)
.... .....+++|+|+++++++|+| +++.++++|+.|||+++|+.++.||+++++.+.+.+ .+|||+|||++++|+
T Consensus 298 ~~~~--~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~ 373 (487)
T PRK07638 298 VDEE--SERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDE 373 (487)
T ss_pred cccc--cCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcC
Confidence 4321 222368999999999999999 568899999999999999999999999998887665 689999999999999
Q ss_pred CCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 449 EGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 449 ~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+|++++.||.+|+||++|.+|+|.|||+++.++|.|.+++|++.+++..|+.++++|+. ..+.++++++++++|
T Consensus 374 ~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~----~~~~~~l~~~~~~~l 447 (487)
T PRK07638 374 EGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG----SATKQQLKSFCLQRL 447 (487)
T ss_pred CCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC----CCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999873 356788998888764
No 44
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=8.6e-64 Score=521.15 Aligned_cols=461 Identities=26% Similarity=0.355 Sum_probs=383.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++.+| +++|+++. ++.+||+||.++++++|.+|.+ +|+++|++|+++++|+++++++++||+++
T Consensus 23 ~~l~~~~~~~-a~~~p--~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 96 (527)
T TIGR02275 23 KPLTDILRDQ-AARYP--DAIAIICG--NRQWSYRELDQRADNLAAGLTK-LGIGQGDTAVVQLPNIAEFYIVFFALLKL 96 (527)
T ss_pred CcHHHHHHHH-HHHCC--CceEEEeC--CceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 4677777666 56666 79999984 6899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH--------HHhhc--CCCCEEEEcCCCCCCCcchHHHHhhhcCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEEL--------QKLTK--VNVPIIVTSRDQSNNKSVSVEELIECCDAA 197 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--------~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 197 (526)
|++++++++..+.+++.++++.+++++++++.... ..+.. .....+.+..... .............
T Consensus 97 G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-- 172 (527)
T TIGR02275 97 GIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTR--VEAELFLWLESPA-- 172 (527)
T ss_pred CeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCC--CcchhhHHhhCcC--
Confidence 99999999999999999999999999999986531 11111 0122222222110 0111111111111
Q ss_pred CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHH-HHHhhccc
Q 041055 198 DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAF-FATGLFCC 276 (526)
Q Consensus 198 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~~l~~ 276 (526)
...+.....++++++++|||||||.||+|.++|+++...+......+. +.++++++..+|++|.+++.. .++.++..
T Consensus 173 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 173 EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICW--LTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcC--CCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 111122456789999999999999999999999999988777666555 678999999999999999854 46788899
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+++++.+.+++..+++.++++++|++.++|+++..+++. ......++++|.+++||+++++++.+++.+.+ ++++++
T Consensus 251 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~ 329 (527)
T TIGR02275 251 GGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQ 329 (527)
T ss_pred CCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEe
Confidence 9999998888999999999999999999999999998876 33456788999999999999999999999998 789999
Q ss_pred ccccccccceeecccCcccccCCCCcccccC-CCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC
Q 041055 356 GYGLTESCGATTFMVSPKQARARSGSCGALS-PTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE 434 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~ 434 (526)
.||+||++...+...... ....+++|+|+ ++..++++| ++++++++|+.|||+++|+.++.||+++++.+...|+.
T Consensus 330 ~YG~tE~~~~~~~~~~~~--~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~ 406 (527)
T TIGR02275 330 VFGMAEGLVNYTRLDDPA--EIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDA 406 (527)
T ss_pred eeccCccCccccCCCCcc--ccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCc
Confidence 999999754333211111 11257899999 488999999 56789999999999999999999999999999999999
Q ss_pred CCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCC
Q 041055 435 DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLT 514 (526)
Q Consensus 435 ~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~ 514 (526)
+|||+|||+|+++++|++++.||.||+||++|++|+|.+||++|.+||+|.+++|++.++...++.++++|++.++ ..+
T Consensus 407 dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~-~~~ 485 (527)
T TIGR02275 407 EGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDP-ALK 485 (527)
T ss_pred CCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999889999999998765 467
Q ss_pred HHHHHHHHHhc
Q 041055 515 EDQVMQFVTSQ 525 (526)
Q Consensus 515 ~~~l~~~l~~~ 525 (526)
.++++++++++
T Consensus 486 ~~~l~~~l~~~ 496 (527)
T TIGR02275 486 AAQLRRFLRER 496 (527)
T ss_pred HHHHHHHHHhC
Confidence 78999999874
No 45
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=8.8e-65 Score=536.48 Aligned_cols=460 Identities=22% Similarity=0.287 Sum_probs=364.1
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCC---CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSA---THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~---~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
.++.+.+... +.+.| +++|+++.+ ..+++||+||.++++++|++|.+ +|+++||+|+++++|+++|++++|||
T Consensus 39 ~~l~~~l~~~-a~~~p--~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~Gv~~gd~Vai~~~n~~e~~~~~lA~ 114 (614)
T PRK08180 39 RRLTDRLVHW-AQEAP--DRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-RGLSAERPLMILSGNSIEHALLALAA 114 (614)
T ss_pred ccHHHHHHHH-HHHCC--CCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 5788887766 56666 799998642 23689999999999999999998 99999999999999999999999999
Q ss_pred HHcCCEEccCCCCCC-----HHHHHHHHHhcCCeEEEEcchh--HHHhh---cCCCCEEEEcCCCCCCCcchHHHHhhhc
Q 041055 125 FSLGAILSPANSINT-----ESEIVKQVRDSGAKLIISASEE--LQKLT---KVNVPIIVTSRDQSNNKSVSVEELIECC 194 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~--~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 194 (526)
+++|++++|++|.++ .+++.+++++++++++|++... ...+. ....+++............++.++....
T Consensus 115 ~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 194 (614)
T PRK08180 115 MYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALLATP 194 (614)
T ss_pred HHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHhccc
Confidence 999999999999988 7999999999999999997542 12222 1123344433221111123444443321
Q ss_pred CCCC-CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhh
Q 041055 195 DAAD-ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGL 273 (526)
Q Consensus 195 ~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~ 273 (526)
.... ..+.....++++++|+|||||||.||||++||+++...+......+.......+++++.+|++|++|+...++.+
T Consensus 195 ~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~ 274 (614)
T PRK08180 195 PTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLGIV 274 (614)
T ss_pred cccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHHHH
Confidence 1100 111113467899999999999999999999999999887776655542222568999999999999987778889
Q ss_pred cccCcEEEEec-CCCH---HHHHHHHHhcCccEeecccHHHHHHHhhcc-----CCCCCCCceEEEEecCCCCHHHHHHH
Q 041055 274 FCCGVTIVVMQ-RFDL---QAMIEAIKTYQVNNIPLVPPVILGLVKYCK-----DSSYLTSLRRVGSGAAPLSKELADEF 344 (526)
Q Consensus 274 l~~G~~~v~~~-~~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~~~~l~~lr~v~~gG~~l~~~~~~~~ 344 (526)
+..|+++++.+ .+++ ..+++.++++++|+++++|+++..|++... ....++++|.+++||+++++++.+++
T Consensus 275 l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~~~ 354 (614)
T PRK08180 275 LYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWDRL 354 (614)
T ss_pred HhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHHHH
Confidence 99999999876 3443 567889999999999999999999987521 23457899999999999999999999
Q ss_pred HHh----CC-CCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecccccc
Q 041055 345 RAK----FP-WVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMR 419 (526)
Q Consensus 345 ~~~----~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~ 419 (526)
.+. ++ ++++++.||+||++.+++...... ...+++|+|+||++++++|+ |..|||+++|++++.
T Consensus 355 ~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~---~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v~~ 423 (614)
T PRK08180 355 DRVAEATCGERIRMMTGLGMTETAPSATFTTGPL---SRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNVTP 423 (614)
T ss_pred HHHHHhhcCCCceeeeeecccccCCceEeccccc---CCCCcccCccCCcEEEEecC--------CCCcEEEEecCccch
Confidence 875 32 378999999999987665433221 23789999999999999984 235999999999999
Q ss_pred ccCCCHHHHhcccCCCCeeeccceEEE----cCCCcEEEEccccceEEe-cCeeeC--hHHHHHHHhcCCCcccEEEEee
Q 041055 420 GYFGNEEATAAAFDEDGWLKTGDLCYF----DGEGFLYIVDRIKELIKH-NGYQVA--PAELEAVLLSHPNILDAAVIPL 492 (526)
Q Consensus 420 gy~~~~~~t~~~~~~~~~~~TGD~~~~----~~~G~l~~~GR~~d~ik~-~G~~v~--~~eIE~~l~~~~~v~~~~vv~~ 492 (526)
|||++|+.|.+.|+.+|||+|||+|++ |++|+++|.||.||+||+ +|++|+ |.|||.++.+||.|.+++|++.
T Consensus 424 GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~ 503 (614)
T PRK08180 424 GYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGH 503 (614)
T ss_pred hhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcC
Confidence 999999999999988999999999999 468999999999998885 798776 7899999999999999999998
Q ss_pred eCCCCCceEEEEEEeCCCC---------------CCCHHHHHHHHHhcC
Q 041055 493 EDEEAGQIPMAYVVRAAGS---------------QLTEDQVMQFVTSQL 526 (526)
Q Consensus 493 ~~~~~~~~~~a~vv~~~~~---------------~~~~~~l~~~l~~~l 526 (526)
+++ .+.|+|++.++. ..+.++|+++++++|
T Consensus 504 ~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 548 (614)
T PRK08180 504 DRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERL 548 (614)
T ss_pred CCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHH
Confidence 874 577999987652 134467888887653
No 46
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.3e-63 Score=520.40 Aligned_cols=460 Identities=29% Similarity=0.409 Sum_probs=384.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..+ +++|+++. ++.+||+||.+++.++|..|.+ +|+++|++|+++++|++++++++|||+++
T Consensus 21 ~~l~~~l~~~-a~~~p--~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~-~gi~~g~~V~v~~~n~~~~~~~~lA~~~~ 94 (542)
T PRK06155 21 RTLPAMLARQ-AERYP--DRPLLVFG--GTRWTYAEAARAAAAAAHALAA-AGVKRGDRVALMCGNRIEFLDVFLGCAWL 94 (542)
T ss_pred cCHHHHHHHH-HHHCC--CCeEEEeC--CccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 5678877777 66677 79999874 6799999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCCCCCcchHHHHhhhcCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQSNNKSVSVEELIECCDAADELP 201 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (526)
|++++|+++.++.+++.++++++++++++++.+....+... ..+ ++.++..........+......... ....
T Consensus 95 G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 173 (542)
T PRK06155 95 GAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLPPLD-APAP 173 (542)
T ss_pred CCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhcccC-CCCC
Confidence 99999999999999999999999999999998776655422 112 3333322110000011100000000 1111
Q ss_pred CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEE
Q 041055 202 GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIV 281 (526)
Q Consensus 202 ~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 281 (526)
.....++++++++|||||||.||+|.++|+++..........+. +.+++++++.+|++|.+++ ..++.++..|++++
T Consensus 174 ~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~--~~~~~~~l~~~pl~~~~~~-~~~~~~l~~G~~~~ 250 (542)
T PRK06155 174 AAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLE--IGADDVLYTTLPLFHTNAL-NAFFQALLAGATYV 250 (542)
T ss_pred CCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcC--CCCCCEEEEecCHHHHHHH-HHHHHHHHcCceEE
Confidence 12346789999999999999999999999999877666555555 6789999999999999998 45688999999999
Q ss_pred EecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccc
Q 041055 282 VMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLT 360 (526)
Q Consensus 282 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~t 360 (526)
+.+.+++..+++.|+++++|++.++|+++..+++. .......+++|.++.|| +++++.+.+++.+ ++++++.||+|
T Consensus 251 ~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~t 327 (542)
T PRK06155 251 LEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGST 327 (542)
T ss_pred eeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeeccc
Confidence 99999999999999999999999999999998876 33344567888877665 5789999999998 78999999999
Q ss_pred cccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecc---ccccccCCCHHHHhcccCCCCe
Q 041055 361 ESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSP---TIMRGYFGNEEATAAAFDEDGW 437 (526)
Q Consensus 361 E~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~---~~~~gy~~~~~~t~~~~~~~~~ 437 (526)
|++.++..... ...++++|.+.++++++|+| +++++++.|+.|||+++|+ +++.||+++++.+.+.| .++|
T Consensus 328 E~~~~~~~~~~----~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~ 401 (542)
T PRK06155 328 ETNFVIAVTHG----SQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLW 401 (542)
T ss_pred ccCccccCCCC----CCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCCc
Confidence 99876654321 12378899999999999999 5588999999999999998 69999999999999888 5899
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHH
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQ 517 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~ 517 (526)
|+|||+|++++||++++.||.+|+||++|.+|+|.+||++|.++|+|.+++|++++++..++.+.+++++.++...+.++
T Consensus 402 ~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~~~~~~ 481 (542)
T PRK06155 402 FHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTALEPVA 481 (542)
T ss_pred EeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999988889999999998888888899
Q ss_pred HHHHHHhcC
Q 041055 518 VMQFVTSQL 526 (526)
Q Consensus 518 l~~~l~~~l 526 (526)
++++|+++|
T Consensus 482 ~~~~~~~~l 490 (542)
T PRK06155 482 LVRHCEPRL 490 (542)
T ss_pred HHHHHHhhC
Confidence 999998875
No 47
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-64 Score=540.65 Aligned_cols=445 Identities=23% Similarity=0.322 Sum_probs=351.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCC-------------------------CCceeCHHHHHHHHHHHHHHHHHhcCCC
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSA-------------------------THERVTYAQLHRSIRSLASGLYHALGVR 102 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~lA~~L~~~~gl~ 102 (526)
.++.+.+... ++..| +++|+.... ..+++||+||.++++++|++|.+ +|++
T Consensus 69 ~t~~~~~~~~-~~~~p--~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~-~Gv~ 144 (700)
T PTZ00216 69 PNFLQRLERI-CKERG--DRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE-LGLT 144 (700)
T ss_pred CCHHHHHHHH-HHhCC--CCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH-hCCC
Confidence 5788888877 67777 688887631 35789999999999999999998 9999
Q ss_pred CCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc----C---CCCEEEE
Q 041055 103 KGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK----V---NVPIIVT 175 (526)
Q Consensus 103 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~---~~~~i~~ 175 (526)
+||+|+|+++|++||+++++||+++|++++|+++.++.+++.++++++++++++++......+.. . ...++.+
T Consensus 145 ~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~ 224 (700)
T PTZ00216 145 KGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYL 224 (700)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999998876554321 1 1234444
Q ss_pred cCCCC-----CCCcchHHHHhhhcC--CCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcc--
Q 041055 176 SRDQS-----NNKSVSVEELIECCD--AADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDV-- 246 (526)
Q Consensus 176 ~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~-- 246 (526)
+.... .....++.++..... ...........++++++++|||||||.||||++||+++.+.+......+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~ 304 (700)
T PTZ00216 225 DSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLI 304 (700)
T ss_pred CCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhccccc
Confidence 33211 112334555543321 101111124467899999999999999999999999999887765543311
Q ss_pred -cCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHH-------HHHhcCccEeecccHHHHHHHhhcc
Q 041055 247 -THAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIE-------AIKTYQVNNIPLVPPVILGLVKYCK 318 (526)
Q Consensus 247 -~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~~ 318 (526)
...+++++++.+|++|++++. .....+..|+.+.+. ++..+.+ .++++++|++.++|.++..+.+...
T Consensus 305 ~~~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~ 380 (700)
T PTZ00216 305 GPPEEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVE 380 (700)
T ss_pred CCCCCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHH
Confidence 135789999999999999984 344556778777653 4555555 6889999999999999988765310
Q ss_pred --------------------------CCC----------------CCCCceEEEEecCCCCHHHHHHHHHhCCCCceeec
Q 041055 319 --------------------------DSS----------------YLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQG 356 (526)
Q Consensus 319 --------------------------~~~----------------~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~ 356 (526)
... ..+++|.+++||+++++++.++++..+ + +++++
T Consensus 381 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~ 458 (700)
T PTZ00216 381 AKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQG 458 (700)
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhc
Confidence 000 015799999999999999998887777 5 99999
Q ss_pred cccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCC-ccCCCCCcceEEEeccccccccCCCHHHHhcccCCC
Q 041055 357 YGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETR-LALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDED 435 (526)
Q Consensus 357 yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~ 435 (526)
||+||+++.++..... ....+++|+|+++++++|+|.++. ...+++..|||+|+||+++.|||++|+.|+++|+.+
T Consensus 459 YG~TEt~~~~~~~~~~---~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~d 535 (700)
T PTZ00216 459 WGLTETVCCGGIQRTG---DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDED 535 (700)
T ss_pred cCcccccccccccCCC---CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhcccc
Confidence 9999998765543322 123789999999999999996542 234567789999999999999999999999999999
Q ss_pred CeeeccceEEEcCCCcEEEEccccceEE-ecCeeeChHHHHHHHhcCCCcccE--EEEeeeCCCCCceEEEEEEeC
Q 041055 436 GWLKTGDLCYFDGEGFLYIVDRIKELIK-HNGYQVAPAELEAVLLSHPNILDA--AVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 436 ~~~~TGD~~~~~~~G~l~~~GR~~d~ik-~~G~~v~~~eIE~~l~~~~~v~~~--~vv~~~~~~~~~~~~a~vv~~ 508 (526)
|||+|||+|++|+||+|+|+||.||+|| .+|++|+|.+||+++.+||.|.++ +|++.++ ...++|+|++.
T Consensus 536 Gw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~---~~~l~a~vv~~ 608 (700)
T PTZ00216 536 GWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA---RSYICALVLTD 608 (700)
T ss_pred CCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC---CceEEEEEecC
Confidence 9999999999999999999999999999 799999999999999999999973 4444333 36789999865
No 48
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.2e-64 Score=533.33 Aligned_cols=448 Identities=23% Similarity=0.285 Sum_probs=352.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC-----CC--CceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS-----AT--HERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~-----~~--~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
-++.+.+... ++.+| +++|+... .. .+++||+||.+++.++|++|.+ +|+++||+|+|+++|++||+++
T Consensus 42 ~t~~~~~~~~-~~~~p--~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ew~~~ 117 (660)
T PLN02430 42 TTAWDIFSKS-VEKYP--DNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-SGAEPGSRVGIYGSNCPQWIVA 117 (660)
T ss_pred CCHHHHHHHH-HHhCC--CCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 4688887776 56666 68888632 11 1357999999999999999998 9999999999999999999999
Q ss_pred HHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHH-hhc-----CCCC-EEEEcCCCC---------CCCc
Q 041055 121 CLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQK-LTK-----VNVP-IIVTSRDQS---------NNKS 184 (526)
Q Consensus 121 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~-~~~-----~~~~-~i~~~~~~~---------~~~~ 184 (526)
++||+++|++++|+++.++.+++.+++++++++++|++...... +.. ..+. ++.++.... ....
T Consensus 118 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~ 197 (660)
T PLN02430 118 MEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKT 197 (660)
T ss_pred HHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEE
Confidence 99999999999999999999999999999999999998764332 211 1222 333332110 0012
Q ss_pred chHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh---cccCCCCcEEEEeCChh
Q 041055 185 VSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV---DVTHAQNDIFLCMIPMF 261 (526)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~---~~~~~~~~~~l~~~p~~ 261 (526)
.++.++...... .........++++++|+|||||||.||||++||+++...+....... ...+.++|++++.+|++
T Consensus 198 ~~~~~~~~~~~~-~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~ 276 (660)
T PLN02430 198 YSWIDFLHMGKE-NPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLA 276 (660)
T ss_pred EEHHHHHHhhcc-CCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHH
Confidence 345444432221 11111134678999999999999999999999999988766543221 11356789999999999
Q ss_pred HHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc------C----------------
Q 041055 262 HIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK------D---------------- 319 (526)
Q Consensus 262 ~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------~---------------- 319 (526)
|+++... .+.++..|+++++... ++..+++.|+++++|++.++|.++..+.+... .
T Consensus 277 H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 354 (660)
T PLN02430 277 HILDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLA 354 (660)
T ss_pred HHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999844 4556788999887654 78899999999999999999999988765300 0
Q ss_pred ----------CCC-------------C-CCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccc
Q 041055 320 ----------SSY-------------L-TSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQA 375 (526)
Q Consensus 320 ----------~~~-------------l-~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~ 375 (526)
... + +++|.+++||+++++++.+.++ .++++.++++||+||+++.++...... .
T Consensus 355 ~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~-~ 432 (660)
T PLN02430 355 WMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDE-M 432 (660)
T ss_pred HHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeecccc-C
Confidence 000 1 5899999999999999866554 454578999999999987665433222 1
Q ss_pred cCCCCcccccCCCcEEEEEeC-CCC-ccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEE
Q 041055 376 RARSGSCGALSPTFYAKVVDT-ETR-LALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLY 453 (526)
Q Consensus 376 ~~~~~~~G~~~~~~~~~ivd~-~~~-~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~ 453 (526)
..++++|+|.++++++++|. +.+ .+++.+..|||+|+||+++.|||++|+.|++.| .+|||+|||+|++|+||+|+
T Consensus 433 -~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~~TGDig~~d~dG~l~ 510 (660)
T PLN02430 433 -CMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWFHTGDIGEILPNGVLK 510 (660)
T ss_pred -CCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hccceeccceEEECCCCcEE
Confidence 22689999999999999873 333 456667789999999999999999999999999 68999999999999999999
Q ss_pred EEccccceEEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC
Q 041055 454 IVDRIKELIKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 454 ~~GR~~d~ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
|.||.||+||. +|++|+|.+||+++.+||.|.+++|+|. ..++.++|+|++.+
T Consensus 511 i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~---~~~~~~~A~vv~~~ 564 (660)
T PLN02430 511 IIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGD---SFKSMLVAVVVPNE 564 (660)
T ss_pred EEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEec---CCcceEEEEEEcCH
Confidence 99999999996 7999999999999999999999999983 24578999999764
No 49
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-63 Score=515.37 Aligned_cols=439 Identities=29% Similarity=0.454 Sum_probs=371.3
Q ss_pred CceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHH
Q 041055 66 SRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVK 145 (526)
Q Consensus 66 ~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 145 (526)
+++|+.+..+++.+||.||.+++.++|.+|.+ +|+++||+|+++++|+++|++++|||+++|++++|+++.++.+++.+
T Consensus 10 ~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~ 88 (488)
T PRK09088 10 QRLAAVDLALGRRWTYAELDALVGRLAAVLRR-RGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRLSASELDA 88 (488)
T ss_pred CceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccCCHHHHHH
Confidence 78999875557899999999999999999997 99999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchH
Q 041055 146 QVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKG 225 (526)
Q Consensus 146 ~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~ 225 (526)
++++++++++++++..... .... ..+.++................++++++++|||||||.||+
T Consensus 89 ~~~~~~~~~ii~~~~~~~~----~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~ 152 (488)
T PRK09088 89 LLQDAEPRLLLGDDAVAAG----RTDV------------EDLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQPKG 152 (488)
T ss_pred HHHhCCCCEEEEcchhhcc----cccc------------cchhhhhhhccccccccCCCCCCCCceEEEeCCCCCCCCcE
Confidence 9999999999998653321 1000 01111111100001111113456789999999999999999
Q ss_pred HHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHH--hcCccEe
Q 041055 226 VILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIK--TYQVNNI 303 (526)
Q Consensus 226 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~--~~~~t~~ 303 (526)
|.++|+++...+........ ...++++++.+|++|++|+...+..++..|+++++.+.+++..++..+. ++++|++
T Consensus 153 v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 230 (488)
T PRK09088 153 VMLSERNLQQTAHNFGVLGR--VDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHY 230 (488)
T ss_pred EEEehHHHHHHHHHHHHhhC--CCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEE
Confidence 99999999877766655444 5689999999999999999777888899999999998899999998886 4899999
Q ss_pred ecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcc
Q 041055 304 PLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSC 382 (526)
Q Consensus 304 ~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~ 382 (526)
+.+|+++..+.+. ......++++|.+++||++++.+..+.+.+. ++++++.||+||++.+.............++++
T Consensus 231 ~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~v 308 (488)
T PRK09088 231 FCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAA 308 (488)
T ss_pred eeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCcc
Confidence 9999999988876 3344567899999999999999888888765 689999999999987544322222112236889
Q ss_pred cccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceE
Q 041055 383 GALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELI 462 (526)
Q Consensus 383 G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~i 462 (526)
|.|.|+++++|+| +++.+++.|+.|||+|+|++++.||+++++.+++.|+.+|||+|||+|+++++|.+++.||.||+|
T Consensus 309 G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i 387 (488)
T PRK09088 309 GIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMF 387 (488)
T ss_pred ccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceE
Confidence 9999999999999 568889999999999999999999999999999999889999999999999999999999999999
Q ss_pred EecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 463 KHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 463 k~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
|.+|.+|+|.+||++|.++|.|.+++|++++++..|+.++++|++.++...+.+++++++++++
T Consensus 388 ~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l 451 (488)
T PRK09088 388 ISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTRL 451 (488)
T ss_pred EeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhhC
Confidence 9999999999999999999999999999999988889999999998776667788999998764
No 50
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.1e-63 Score=516.22 Aligned_cols=458 Identities=29% Similarity=0.405 Sum_probs=390.5
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcC
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLG 128 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 128 (526)
++.+++.++ + ..+ +++|+.+. .++.+||+||.+++.++|..|.+ +|+++||+|+++++|+++++++++||+++|
T Consensus 4 ~l~~~~~~~-~-~~~--~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~v~i~~~~~~e~~v~~la~~~~G 77 (504)
T PRK07514 4 NLFDALRAA-F-ADR--DAPFIETP-DGLRYTYGDLDAASARLANLLVA-LGVKPGDRVAVQVEKSPEALALYLATLRAG 77 (504)
T ss_pred cHHHHHHHH-h-hCC--CCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 577888877 4 555 68888774 47899999999999999999998 999999999999999999999999999999
Q ss_pred CEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC----CCC-EEEEcCCCCCCCcchHHHHhhhcCCCCCCCCC
Q 041055 129 AILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV----NVP-IIVTSRDQSNNKSVSVEELIECCDAADELPGC 203 (526)
Q Consensus 129 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (526)
++++|+++.++.+++..+++.++++++++++.....+... ... ++.++... ...+.+....... .....
T Consensus 78 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~ 151 (504)
T PRK07514 78 AVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADG----TGSLLEAAAAAPD--DFETV 151 (504)
T ss_pred cEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCC----cccHHHhhhhcCc--ccCcc
Confidence 9999999999999999999999999999998766554321 222 33332211 1112221111111 11112
Q ss_pred CCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 204 QLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 204 ~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
...++++++++|||||||.||+|.++|+++...+......++ ..++++++..+|++|..|+....+.++..|+++++.
T Consensus 152 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 229 (504)
T PRK07514 152 PRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWR--FTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFL 229 (504)
T ss_pred cCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhC--CCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEEC
Confidence 456789999999999999999999999999988777666665 678999999999999999877788999999999999
Q ss_pred cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccc
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTES 362 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~ 362 (526)
+..++..+++.+ .++|++..+|+++..+++. ......++++|.+++||+++++++.+.|++.+ +.++++.||+||+
T Consensus 230 ~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~ 306 (504)
T PRK07514 230 PKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTET 306 (504)
T ss_pred CCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeecccccc
Confidence 989999999999 4799999999999999876 33456678999999999999999999999998 6789999999998
Q ss_pred cceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccc
Q 041055 363 CGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGD 442 (526)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD 442 (526)
+........ . ....+++|.|+++++++|+|++++.+++.|+.|||+++|++++.||+++++.+++.|..++||+|||
T Consensus 307 ~~~~~~~~~--~-~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD 383 (504)
T PRK07514 307 NMNTSNPYD--G-ERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGD 383 (504)
T ss_pred cccccCCcc--c-cccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecc
Confidence 765443221 1 1226789999999999999988899999999999999999999999999999999998899999999
Q ss_pred eEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHH
Q 041055 443 LCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFV 522 (526)
Q Consensus 443 ~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l 522 (526)
+++++++|.+++.||.||+||++|++|+|.+||+++.++++|.+++|++++++..++.+++++++.++...+.+++++++
T Consensus 384 l~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 463 (504)
T PRK07514 384 LGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAAILAAL 463 (504)
T ss_pred eEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888999999999888777888999999
Q ss_pred HhcC
Q 041055 523 TSQL 526 (526)
Q Consensus 523 ~~~l 526 (526)
+++|
T Consensus 464 ~~~l 467 (504)
T PRK07514 464 KGRL 467 (504)
T ss_pred Hhhc
Confidence 8865
No 51
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-64 Score=518.57 Aligned_cols=461 Identities=26% Similarity=0.427 Sum_probs=387.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
+|+.+.+... ++..+ +++|+++. ++.+||.||.+++.++|.+|.+ .|++++++|+++++|+++++++++||+++
T Consensus 2 ~~~~~~~~~~-~~~~~--~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (497)
T PRK06145 2 FNLSASIAFH-ARRTP--DRAALVYR--DQEISYAEFHQRILQAAGMLHA-RGIGQGDVVALLMKNSAAFLELAFAASYL 75 (497)
T ss_pred ccHHHHHHHH-HHHCC--CceEEEEC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 3566666666 55566 79999884 6899999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQ 207 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (526)
|++++|+++.++.+++.++++.+++++++++.+....... ....+.++... .. .+..+.. ... .........+
T Consensus 76 G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~-~~---~~~~~~~-~~~-~~~~~~~~~~ 148 (497)
T PRK06145 76 GAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-ETPKIVIDAAA-QA---DSRRLAQ-GGL-EIPPQAAVAP 148 (497)
T ss_pred CcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-ccceEEecCcc-cc---hhHHHhc-cCC-CCCCCCCCCc
Confidence 9999999999999999999999999999998765443221 12233332211 00 0111110 000 0111114567
Q ss_pred CCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCC
Q 041055 208 DDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFD 287 (526)
Q Consensus 208 ~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~ 287 (526)
+++++++|||||||.||+|.++|+++..........+. ...+++++...|++|.+++....+.++..|+++++.+.++
T Consensus 149 ~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~ 226 (497)
T PRK06145 149 TDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALG--LTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFD 226 (497)
T ss_pred cceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhC--CCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCC
Confidence 89999999999999999999999999876554444444 6788999999999999998666677889999999999999
Q ss_pred HHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccccee
Q 041055 288 LQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGAT 366 (526)
Q Consensus 288 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 366 (526)
+..+++.++++++|++.++|+++..+++. ......++++|.+++||+++++++.+.+.+.|++..+++.||+||++..+
T Consensus 227 ~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~ 306 (497)
T PRK06145 227 PEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGD 306 (497)
T ss_pred HHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcc
Confidence 99999999999999999999999999876 33455678999999999999999999999999888999999999998765
Q ss_pred ecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEE
Q 041055 367 TFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYF 446 (526)
Q Consensus 367 ~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~ 446 (526)
+........ ...+++|+|+++++++++| +++..+++|+.|||+++|++++.||+++++.+.+.| .++||+|||++++
T Consensus 307 ~~~~~~~~~-~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~ 383 (497)
T PRK06145 307 TLMEAGREI-EKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYL 383 (497)
T ss_pred eeccCcccc-ccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEE
Confidence 543322222 2267899999999999999 567889999999999999999999999999999998 5799999999999
Q ss_pred cCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 447 DGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 447 ~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+++|+++++||.||+||++|++|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++...+.++++++++++|
T Consensus 384 ~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~l 463 (497)
T PRK06145 384 DEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCRQRL 463 (497)
T ss_pred cCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999988899999999998877778889999998865
No 52
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2e-63 Score=519.72 Aligned_cols=462 Identities=24% Similarity=0.349 Sum_probs=384.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC----CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS----ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLA 123 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA 123 (526)
.++.+.+... ++..| +++|++.. ..++.+||+||.+++.++|.+|.+ +|+++|++|+++++|+++++++++|
T Consensus 22 ~~~~~~~~~~-~~~~p--~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la 97 (538)
T TIGR03208 22 RTINDHFDAA-VANCP--DKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-LGVGRGDVVSFQLPNRWEFTALYLA 97 (538)
T ss_pred CcHHHHHHHH-HHHCC--CceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHH
Confidence 4677777766 56666 79998752 124689999999999999999998 9999999999999999999999999
Q ss_pred HHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH-----HH---hhc-C-CC-CEEEEcCCCCCCCcchHHHHhh
Q 041055 124 IFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEEL-----QK---LTK-V-NV-PIIVTSRDQSNNKSVSVEELIE 192 (526)
Q Consensus 124 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~---~~~-~-~~-~~i~~~~~~~~~~~~~~~~~~~ 192 (526)
|+++|++++|++|.++.+++.++++.++++++++++... .. +.. . .. .+++.+.. ....+.....
T Consensus 98 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 173 (538)
T TIGR03208 98 CARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGD----GDDSFDRVLM 173 (538)
T ss_pred HHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCC----CCcCHHHHhh
Confidence 999999999999999999999999999999999976531 11 111 0 11 13333221 1112222221
Q ss_pred hcCCC--CC----CCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHH
Q 041055 193 CCDAA--DE----LPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGL 266 (526)
Q Consensus 193 ~~~~~--~~----~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~ 266 (526)
..... .. .......++++++++|||||||.||+|+++|+++...+......+. ...++++++.+|++|.+|+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~g~ 251 (538)
T TIGR03208 174 TPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLE--LGGGDVILMASPMAHQTGF 251 (538)
T ss_pred ccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcC--CCCCCeEEEeCCchhHHHH
Confidence 11000 00 1111346789999999999999999999999999988777766655 6788999999999999998
Q ss_pred HHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHH
Q 041055 267 AFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFR 345 (526)
Q Consensus 267 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~ 345 (526)
...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.. .....++++|.+++||+++++++.+++.
T Consensus 252 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~ 331 (538)
T TIGR03208 252 MYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAW 331 (538)
T ss_pred HHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHH
Confidence 778889999999999998899999999999999999999999999988762 3346788999999999999999999999
Q ss_pred HhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCH
Q 041055 346 AKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNE 425 (526)
Q Consensus 346 ~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 425 (526)
+.+ ++.+++.||+||++.+.+....... .....++|+|.++++++|+| +++.+++.|+.|||+++|++++.||++++
T Consensus 332 ~~~-~~~~~~~YG~tE~~~~~~~~~~~~~-~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~ 408 (538)
T TIGR03208 332 ELL-GALIVSAWGMTENGAVTVTEPDDAL-EKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRP 408 (538)
T ss_pred HHc-CCeEEeeeccCcCCCccccCcccch-hhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCc
Confidence 998 6899999999999876654332211 11246789999999999999 56788999999999999999999999999
Q ss_pred HHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEE
Q 041055 426 EATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYV 505 (526)
Q Consensus 426 ~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~v 505 (526)
+.+. ++.+|||+|||+|+++++|.++++||.||+||.+|++|+|.|||++|.+||.|.+++|++.++...++.+.++|
T Consensus 409 ~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v 486 (538)
T TIGR03208 409 HLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVV 486 (538)
T ss_pred cccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEE
Confidence 8775 35789999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred EeCCCCCCCHHHHHHHHHh
Q 041055 506 VRAAGSQLTEDQVMQFVTS 524 (526)
Q Consensus 506 v~~~~~~~~~~~l~~~l~~ 524 (526)
++.++...+.+++++++++
T Consensus 487 ~~~~~~~~~~~~l~~~~~~ 505 (538)
T TIGR03208 487 VPKPGCTLDFAAMVAFLKA 505 (538)
T ss_pred EECCCCCCCHHHHHHHHHh
Confidence 9988877888899999975
No 53
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.7e-63 Score=516.53 Aligned_cols=466 Identities=31% Similarity=0.438 Sum_probs=390.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.|+.+.+... +...+ +++|+++. ++.+||.||.++++++|.+|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 17 ~n~~~~~~~~-a~~~~--~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~~a~~~~ 90 (542)
T PRK07786 17 QNWVNQLARH-ALMQP--DAPALRFL--GNTTTWRELDDRVAALAGALSR-RGVGFGDRVLILMLNRTEFVESVLAANML 90 (542)
T ss_pred cCHHHHHHHH-HHHCC--CCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 7888988777 56666 79999874 6799999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVPIIVTSRDQSNNKSVSVEELIECCDAADELPG 202 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (526)
|++++|+++..+.+++.++++++++++++++......+... ....+....+.......++.++...... ..+.
T Consensus 91 G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 168 (542)
T PRK07786 91 GAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGP--AHAP 168 (542)
T ss_pred CeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCC--CCCC
Confidence 99999999999999999999999999999987765544311 2222222222112223444444322211 1111
Q ss_pred CCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEE
Q 041055 203 CQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVV 282 (526)
Q Consensus 203 ~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~ 282 (526)
.....+++++++|||||||.||+|.++|+++...+......++. ...++++++..|++|.+|+ ..++.++..|+++++
T Consensus 169 ~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~ 246 (542)
T PRK07786 169 VDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGA-DINSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVI 246 (542)
T ss_pred CCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCC-CCCCceEEEecchHHHHHH-HHHHHHHHccCEEEE
Confidence 23456789999999999999999999999998887776655552 2568899999999999998 677888999999998
Q ss_pred ec--CCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccc
Q 041055 283 MQ--RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLT 360 (526)
Q Consensus 283 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~t 360 (526)
.+ .+++..+++.++++++|.++++|+++..+++.........++|.+++||+++++++.+.+.+.+++..+++.||+|
T Consensus 247 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~t 326 (542)
T PRK07786 247 YPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQT 326 (542)
T ss_pred ccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeeccc
Confidence 65 6799999999999999999999999999988733222334799999999999999999999999889999999999
Q ss_pred cccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeec
Q 041055 361 ESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKT 440 (526)
Q Consensus 361 E~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~T 440 (526)
|++.+.+....... ....+++|+|++++.++|+| +++.+++.|+.|||+++|+.+++||+++++.+...| .+|||+|
T Consensus 327 E~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~T 403 (542)
T PRK07786 327 EMSPVTCMLLGEDA-IRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFHS 403 (542)
T ss_pred ccccceEecCcccc-cccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh-hCCcccc
Confidence 99876554332222 22368899999999999999 567889999999999999999999999999999998 5799999
Q ss_pred cceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCC-CCCHHHHH
Q 041055 441 GDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGS-QLTEDQVM 519 (526)
Q Consensus 441 GD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~-~~~~~~l~ 519 (526)
||+++++++|.+++.||.||+||++|.+|+|.|||++|.++|.|.+++|++.+++..++.++++|++.++. ....++++
T Consensus 404 GDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 483 (542)
T PRK07786 404 GDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAALTLEDLA 483 (542)
T ss_pred cceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888889999999987654 35678899
Q ss_pred HHHHhcC
Q 041055 520 QFVTSQL 526 (526)
Q Consensus 520 ~~l~~~l 526 (526)
+++++++
T Consensus 484 ~~l~~~l 490 (542)
T PRK07786 484 EFLTDRL 490 (542)
T ss_pred HHHHhhc
Confidence 9988764
No 54
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2.7e-63 Score=516.85 Aligned_cols=467 Identities=28% Similarity=0.401 Sum_probs=386.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCC---CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSA---THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~---~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
.++.+++... +++.| +++|++..+ +.+.+||.||.++++++|.+|.+ +|+++||+|+++++|+++++++++||
T Consensus 7 ~~l~~~~~~~-a~~~p--~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-~g~~~~~~v~i~~~n~~~~~~~~la~ 82 (517)
T PRK08008 7 QHLRQMWDDL-ADVYG--HKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-LGIRKGDKVALHLDNCPEFIFCWFGL 82 (517)
T ss_pred ccHHHHHHHH-HHHCC--CceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4678887777 66677 799998643 23789999999999999999997 99999999999999999999999999
Q ss_pred HHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC------CCC-EEEEcCCC-CCCCcchHHHHhhhcCC
Q 041055 125 FSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV------NVP-IIVTSRDQ-SNNKSVSVEELIECCDA 196 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~------~~~-~i~~~~~~-~~~~~~~~~~~~~~~~~ 196 (526)
+++|+++++++|..+.+++.++++++++++++++.+..+.+... ..+ +++.+... .......+.+.......
T Consensus 83 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (517)
T PRK08008 83 AKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQPA 162 (517)
T ss_pred HHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCCc
Confidence 99999999999999999999999999999999998765544321 122 22222211 11222333333221111
Q ss_pred CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhccc
Q 041055 197 ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCC 276 (526)
Q Consensus 197 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~ 276 (526)
.........++++++++|||||||.||+|+++|+++............ +..++++++.+|++|..+....++.++..
T Consensus 163 -~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 239 (517)
T PRK08008 163 -TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCA--LRDDDVYLTVMPAFHIDCQCTAAMAAFSA 239 (517)
T ss_pred -cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcC--CCCCCeEEEecCcHHHHHHHHHHHHHHhc
Confidence 111112345689999999999999999999999999865433322222 56789999999999998877788889999
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+++++.+++++..+++.++++++|++.++|++++.++... .......+++.+.++ .+++++..+.|.+.+ ++++++
T Consensus 240 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 317 (517)
T PRK08008 240 GATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLT 317 (517)
T ss_pred CcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEe
Confidence 99999999999999999999999999999999999988762 222334678887775 478999999999988 789999
Q ss_pred ccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEec---cccccccCCCHHHHhccc
Q 041055 356 GYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKS---PTIMRGYFGNEEATAAAF 432 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~---~~~~~gy~~~~~~t~~~~ 432 (526)
.||+||++..++....... ...+++|.|+++++++|+| +++++++.|+.|||+++| ++++.||+++++.+.+.|
T Consensus 318 ~YG~tE~~~~~~~~~~~~~--~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~ 394 (517)
T PRK08008 318 SYGMTETIVGIIGDRPGDK--RRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVL 394 (517)
T ss_pred eccccccccccccCCcccc--ccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhcc
Confidence 9999999865554332221 2267899999999999999 568899999999999998 689999999999999999
Q ss_pred CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC
Q 041055 433 DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ 512 (526)
Q Consensus 433 ~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~ 512 (526)
..+|||+|||+|++++||.+++.||.||+||.+|++|+|.+||+++.++|.|.+++|++++++..++.+.++|+++++..
T Consensus 395 ~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~~ 474 (517)
T PRK08008 395 EADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGET 474 (517)
T ss_pred cCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999888899999999998877
Q ss_pred CCHHHHHHHHHhcC
Q 041055 513 LTEDQVMQFVTSQL 526 (526)
Q Consensus 513 ~~~~~l~~~l~~~l 526 (526)
.+.+++++++++++
T Consensus 475 ~~~~~l~~~~~~~l 488 (517)
T PRK08008 475 LSEEEFFAFCEQNM 488 (517)
T ss_pred CCHHHHHHHHHhhc
Confidence 88889999998864
No 55
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-63 Score=518.14 Aligned_cols=466 Identities=29% Similarity=0.431 Sum_probs=395.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
-++.+.+... ++..+ +++|+++. ++.+||+||.+++.++|..|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 11 ~~l~~~l~~~-a~~~~--~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gi~~~~~V~l~~~~~~~~~~~~~a~~~~ 84 (523)
T PRK08316 11 QTIGDILRRS-ARRYP--DKTALVFG--DRSWTYAELDAAVNRVAAALLD-LGLKKGDRVAALGHNSDAYALLWLACARA 84 (523)
T ss_pred CCHHHHHHHH-HHHCC--CCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 4678887766 55666 79999974 5899999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC----CCCEEEEc----CCCCCCCcchHHHHhhhcCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV----NVPIIVTS----RDQSNNKSVSVEELIECCDAADE 199 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~ 199 (526)
|++++|+++.++.+++.++++.+++++++++.+....+... ....+... .......+..+.+....... .
T Consensus 85 G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 162 (523)
T PRK08316 85 GAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGSV--A 162 (523)
T ss_pred CcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCCC--c
Confidence 99999999999999999999999999999998766554321 11111111 01111223333333221111 1
Q ss_pred CCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcE
Q 041055 200 LPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVT 279 (526)
Q Consensus 200 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~ 279 (526)
.+......+++++++|||||||.||+|.++|+++..........+. +.+++++++.+|++|.+++...++.++..|++
T Consensus 163 ~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~ 240 (523)
T PRK08316 163 EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGD--MSADDIPLHALPLYHCAQLDVFLGPYLYVGAT 240 (523)
T ss_pred cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhC--CCCCceEEEccCCchhhhHHHHHHHHHhcCce
Confidence 1222456789999999999999999999999999887776665555 67899999999999999986667778889999
Q ss_pred EEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccc
Q 041055 280 IVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYG 358 (526)
Q Consensus 280 ~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG 358 (526)
+++.+..+++.+++.++++++|++.++|+++..+++. ......++++|.+++||++++.++.+.+++.++++++++.||
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 241 NVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred EEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 9999888999999999999999999999999999887 334567889999999999999999999999998899999999
Q ss_pred cccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCee
Q 041055 359 LTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWL 438 (526)
Q Consensus 359 ~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~ 438 (526)
+||++.+......... ....+++|+|+++++++|+| +++.+++.|+.|||+++|+.++.||+++++.++..| .++||
T Consensus 321 ~tE~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~ 397 (523)
T PRK08316 321 QTEIAPLATVLGPEEH-LRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWF 397 (523)
T ss_pred ccccCccccccCcccc-ccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCe
Confidence 9999876665433222 22368999999999999999 568899999999999999999999999999999988 68999
Q ss_pred eccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHH
Q 041055 439 KTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQV 518 (526)
Q Consensus 439 ~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l 518 (526)
+|||+|++++||.+++.||.||+||++|++|+|.+||+.|.++|+|.+++|++.+++..++.+++++++.++...+.+++
T Consensus 398 ~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 477 (523)
T PRK08316 398 HSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDEL 477 (523)
T ss_pred eccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988999999999988777778889
Q ss_pred HHHHHhcC
Q 041055 519 MQFVTSQL 526 (526)
Q Consensus 519 ~~~l~~~l 526 (526)
+++++++|
T Consensus 478 ~~~~~~~l 485 (523)
T PRK08316 478 IAHCRARL 485 (523)
T ss_pred HHHHHHhc
Confidence 99998764
No 56
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=5.2e-63 Score=517.87 Aligned_cols=464 Identities=28% Similarity=0.408 Sum_probs=385.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|+++. +++.+||+||.+++.++|++|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 23 ~~l~~~~~~~-~~~~p--d~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~-~G~~~gd~V~i~~~n~~~~~~~~lA~~~~ 97 (547)
T PRK06087 23 ASLADYWQQT-ARAMP--DKIAVVDN-HGASYTYSALDHAASRLANWLLA-KGIEPGDRVAFQLPGWCEFTIIYLACLKV 97 (547)
T ss_pred CCHHHHHHHH-HHHCC--CceEEEcC-CCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 4677877766 55666 79999974 45799999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh-----HHHhh----cC-CC-CEEEEcCCCCCCCcchHHHHhhhcCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEE-----LQKLT----KV-NV-PIIVTSRDQSNNKSVSVEELIECCDA 196 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~----~~-~~-~~i~~~~~~~~~~~~~~~~~~~~~~~ 196 (526)
|++++|++|.++.+++.++++.+++++++++... .+.+. .. .. .++.++.........++.++......
T Consensus 98 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (547)
T PRK06087 98 GAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYEP 177 (547)
T ss_pred CcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCCc
Confidence 9999999999999999999999999999997531 11111 11 11 23333322212222234333322111
Q ss_pred CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhccc
Q 041055 197 ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCC 276 (526)
Q Consensus 197 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~ 276 (526)
.. ......++++++++|||||||.||+|.++|.++..........++ ..++++++..+|++|.+|+...++.++..
T Consensus 178 -~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 178 -LT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLN--LTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred -cc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC--CCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 11 111346789999999999999999999999999887766655555 67899999999999999987788889999
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+++++.+.+++..+++.++++++++++.+|+.+..+++. .....+++++|.+++||+++++++.+.+.+. ++++++
T Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 254 GARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 9999999999999999999999999999988888888776 3445678899999999999999999988765 789999
Q ss_pred ccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCC
Q 041055 356 GYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDED 435 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~ 435 (526)
.||+||++.......... .....+++|+|++++.++++| +++.++++|+.|||+++|++++.||+++++.+...|+.+
T Consensus 332 ~YG~TE~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~ 409 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDP-LSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEE 409 (547)
T ss_pred EecccccCCccccCCCcc-hhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCC
Confidence 999999987655432211 111246789999999999999 677899999999999999999999999999999999889
Q ss_pred CeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC-CCCCC
Q 041055 436 GWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA-GSQLT 514 (526)
Q Consensus 436 ~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~-~~~~~ 514 (526)
|||+|||+++++++|+++++||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..|++++++|++.+ +...+
T Consensus 410 g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~ 489 (547)
T PRK06087 410 GWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLT 489 (547)
T ss_pred CCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999888999999999876 44567
Q ss_pred HHHHHHHHHh
Q 041055 515 EDQVMQFVTS 524 (526)
Q Consensus 515 ~~~l~~~l~~ 524 (526)
.+++.+++++
T Consensus 490 ~~~~~~~~~~ 499 (547)
T PRK06087 490 LEEVVAFFSR 499 (547)
T ss_pred HHHHHHHHHh
Confidence 7888888753
No 57
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=9.6e-63 Score=516.81 Aligned_cols=468 Identities=26% Similarity=0.434 Sum_probs=377.9
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..+ +++|+++. ++.+||.||.++++++|++|.+..|+++||+|+++++|+++|+++++||+++
T Consensus 24 ~~~~~~l~~~-~~~~p--~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~ 98 (562)
T PRK12492 24 KSVVEVFERS-CKKFA--DRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRA 98 (562)
T ss_pred CcHHHHHHHH-HHhCC--CCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 4677777666 55566 78999863 6799999999999999999987349999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc----CCCCEEEEcC-C------------------------
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK----VNVPIIVTSR-D------------------------ 178 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~i~~~~-~------------------------ 178 (526)
|++++|+++.++.+++.+++++++++++++++.....+.. .....+.... .
T Consensus 99 G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK12492 99 GLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPA 178 (562)
T ss_pred CeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccc
Confidence 9999999999999999999999999999987644322211 0111100000 0
Q ss_pred CCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcc-c------CCC-
Q 041055 179 QSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDV-T------HAQ- 250 (526)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~-~------~~~- 250 (526)
........+.+....... ..........+++++++|||||||.||+|.++|+++...+......+.. . ...
T Consensus 179 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (562)
T PRK12492 179 YHLPQAVPFKQALRQGRG-LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEG 257 (562)
T ss_pred cCCcccccHHHHHhccCC-CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCC
Confidence 000011223333221111 1111124566899999999999999999999999998776654433321 0 122
Q ss_pred CcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceE
Q 041055 251 NDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRR 328 (526)
Q Consensus 251 ~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~ 328 (526)
.+++++.+|++|++++...++..+..|...++. ..+++..+++.++++++|++..+|+++..+++. .....+++++|.
T Consensus 258 ~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~ 337 (562)
T PRK12492 258 QEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKL 337 (562)
T ss_pred CeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeE
Confidence 357789999999999876677777888877665 456899999999999999999999999999886 334566889999
Q ss_pred EEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcc
Q 041055 329 VGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRG 408 (526)
Q Consensus 329 v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~G 408 (526)
+++||+++++++.+.|.+.+ ++++++.||+||++.+++...... ....+++|+|+++++++|+|+ ++.++++|+.|
T Consensus 338 ~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~~G~p~~~~~v~ivd~-~~~~~~~g~~G 413 (562)
T PRK12492 338 TNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGE--LARLGTVGIPVPGTALKVIDD-DGNELPLGERG 413 (562)
T ss_pred EEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcc--cccCCccceecCCCEEEEECC-CCCCCCCCCce
Confidence 99999999999999999987 789999999999987665443221 122678999999999999995 67889999999
Q ss_pred eEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEE
Q 041055 409 ELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAA 488 (526)
Q Consensus 409 el~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~ 488 (526)
||+++|+.++.||+++++.+.+.|+.+|||+|||+|+++++|.+++.||.||+||++|++|+|.+||++|.+||.|.+++
T Consensus 414 el~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~ 493 (562)
T PRK12492 414 ELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCA 493 (562)
T ss_pred EEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEE
Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 489 VIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 489 vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
|++.++...++.+++++++.++ ..+.++++++++++|
T Consensus 494 v~~~~~~~~~~~~~~~v~~~~~-~~~~~~i~~~~~~~l 530 (562)
T PRK12492 494 AIGVPDERSGEAVKLFVVARDP-GLSVEELKAYCKENF 530 (562)
T ss_pred EEeccCCCCCceEEEEEEeCCC-CCCHHHHHHHHHHhc
Confidence 9999998889999999987654 356788999998875
No 58
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-63 Score=511.17 Aligned_cols=447 Identities=31% Similarity=0.504 Sum_probs=378.9
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
+++.+++.++ +...| +++|+++. ++.+||+||.+++.++|++|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 2 ~~~~~~l~~~-a~~~p--~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (483)
T PRK03640 2 ETMPNWLKQR-AFLTP--DRTAIEFE--EKKVTFMELHEAVVSVAGKLAA-LGVKKGDRVALLMKNGMEMILVIHALQQL 75 (483)
T ss_pred CcHHHHHHHH-HHhCC--CceEEEeC--CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHhC
Confidence 4678888877 66667 89999984 5899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQ 207 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (526)
|++++|+++..+.+++..+++++++++++++......+.... + ..+.++...... .........+
T Consensus 76 G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~-~~~~~~~~~~ 140 (483)
T PRK03640 76 GAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI-S-------------VKFAELMNGPKE-EAEIQEEFDL 140 (483)
T ss_pred CcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc-c-------------ccHHHHhhcccc-cCCCCCCCCC
Confidence 999999999999999999999999999999876544332110 0 012222211111 1111124467
Q ss_pred CCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCC
Q 041055 208 DDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFD 287 (526)
Q Consensus 208 ~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~ 287 (526)
+++++++|||||||.||+|.++|.++...+......++ ..++|+++..+|++|++++ ..++.++..|+++++.+.++
T Consensus 141 ~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~ 217 (483)
T PRK03640 141 DEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLG--LTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLVEKFD 217 (483)
T ss_pred CCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcC--CCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEecCCCC
Confidence 89999999999999999999999998877665555544 6789999999999999998 55778889999999999999
Q ss_pred HHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceee
Q 041055 288 LQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATT 367 (526)
Q Consensus 288 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~ 367 (526)
+..+++.++++++|++.++|+++..|++.........++|.+++||+++++.+.+.+++. ++++++.||+||++..+.
T Consensus 218 ~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~ 295 (483)
T PRK03640 218 AEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIV 295 (483)
T ss_pred HHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCccccccc
Confidence 999999999999999999999999998763333445789999999999999999988875 789999999999876544
Q ss_pred cccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEc
Q 041055 368 FMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFD 447 (526)
Q Consensus 368 ~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~ 447 (526)
....... ....+++|+|++++++++.|+ +.+++.|+.|||+++||+++.||+++++.+...| .++||+|||+++++
T Consensus 296 ~~~~~~~-~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~ 371 (483)
T PRK03640 296 TLSPEDA-LTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLD 371 (483)
T ss_pred ccCcccc-cccCCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEc
Confidence 3332222 223789999999999999984 3789999999999999999999999999999988 68999999999999
Q ss_pred CCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 448 GEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 448 ~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+||.+++.||.||++|.+|.+|+|.+||+++.++|.|.+++|++.+++..++.++++++.. ...+.++++++++++|
T Consensus 372 ~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~l 448 (483)
T PRK03640 372 EEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKS--GEVTEEELRHFCEEKL 448 (483)
T ss_pred CCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeC--CCCCHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999888888999988854 4567788999998764
No 59
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-63 Score=520.63 Aligned_cols=461 Identities=24% Similarity=0.328 Sum_probs=364.8
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++.+| +++|+++.+.++.+||+||.+++.++|+.|.+ +|+++|++|+++++|++++++++|||+++
T Consensus 14 ~~~~~~l~~~-a~~~p--~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~e~~~~~lA~~~~ 89 (540)
T PRK05857 14 STVLDRVFEQ-ARQQP--EAIALRRCDGTSALRYRELVAEVGGLAADLRA-QSVSRGSRVLVISDNGPETYLSVLACAKL 89 (540)
T ss_pred cchHHHHHHH-HhhCC--CcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-hCcCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 4678888877 66777 79999875556789999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHh---hc--CCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKL---TK--VNVPIIVTSRDQSNNKSVSVEELIECCDAADELPG 202 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~---~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (526)
|++++|+++.++.+++.++++.++++++|+++...... .. ...+.+.++....... ........ .....
T Consensus 90 G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~ 163 (540)
T PRK05857 90 GAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRE---SEHSLDAA---SLAGN 163 (540)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeeccccccc---cccccccc---ccccc
Confidence 99999999999999999999999999999987653221 11 1233444332111000 00000000 01111
Q ss_pred CCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhh-h-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEE
Q 041055 203 CQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWT-V-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTI 280 (526)
Q Consensus 203 ~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 280 (526)
....++++++++|||||||.||||.++|+++.+........ . .+....+++.+..+|++|.+++ ...+.+++.|+++
T Consensus 164 ~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l-~~~~~~l~~G~~~ 242 (540)
T PRK05857 164 ADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGL-WWILTCLMHGGLC 242 (540)
T ss_pred cCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchH-HHHHHHhhcceeE
Confidence 13467899999999999999999999999998765443221 0 0124467899999999999998 4567788889887
Q ss_pred EEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccc
Q 041055 281 VVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGL 359 (526)
Q Consensus 281 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~ 359 (526)
++ ...++..+++.++++++|.++++|+++..|++. .....+++++|.+++||++++....+ +.+.+ ++++++.||+
T Consensus 243 v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~ 319 (540)
T PRK05857 243 VT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGL 319 (540)
T ss_pred Ee-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCC
Confidence 75 456889999999999999999999999999886 33456789999999999999988775 45566 7899999999
Q ss_pred ccccceeecccCcccc--cCCCCcccccCCCcEEEEEeCCCCccC-----CCCCcceEEEeccccccccCCCHHHHhccc
Q 041055 360 TESCGATTFMVSPKQA--RARSGSCGALSPTFYAKVVDTETRLAL-----PPYQRGELWLKSPTIMRGYFGNEEATAAAF 432 (526)
Q Consensus 360 tE~~~~~~~~~~~~~~--~~~~~~~G~~~~~~~~~ivd~~~~~~~-----~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~ 432 (526)
||++............ ...++++|+|++|++++|+|+++..++ +.|+.|||+|+|++++.||+++++.+.+.|
T Consensus 320 TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~ 399 (540)
T PRK05857 320 SETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL 399 (540)
T ss_pred CcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc
Confidence 9998644332211111 112689999999999999996544333 457899999999999999999999999998
Q ss_pred CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC
Q 041055 433 DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ 512 (526)
Q Consensus 433 ~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~ 512 (526)
.+|||+|||+|++|++|++++.||.||+||++|++|+|.|||.+|..||.|.+|+|+++++...++.++++|+..++.+
T Consensus 400 -~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~ 478 (540)
T PRK05857 400 -IDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAELD 478 (540)
T ss_pred -CCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCCC
Confidence 5899999999999999999999999999999999999999999999999999999999999888889999988765432
Q ss_pred C-CHHHHHHHHH
Q 041055 513 L-TEDQVMQFVT 523 (526)
Q Consensus 513 ~-~~~~l~~~l~ 523 (526)
. ..+++++.++
T Consensus 479 ~~~~~~l~~~~~ 490 (540)
T PRK05857 479 ESAARALKHTIA 490 (540)
T ss_pred hhhHHHHHHHHH
Confidence 2 1244544443
No 60
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-63 Score=527.91 Aligned_cols=456 Identities=22% Similarity=0.356 Sum_probs=358.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCC-------CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSA-------THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
.|+.+++... ++..+ +++|++..+ ..+.+||+||.+++.++|++|.+ . +++||+|+++++|+++|+++
T Consensus 34 ~~~~~~~~~~-~~~~~--~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~V~l~~~n~~e~~~~ 108 (612)
T PRK12476 34 TTLISLIERN-IANVG--DTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ-V-AGPGDRVAILAPQGIDYVAG 108 (612)
T ss_pred CcHHHHHHHH-HHhCC--CceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEECCCChhHHHH
Confidence 6788877665 55555 799988531 12489999999999999999987 5 89999999999999999999
Q ss_pred HHHHHHcCCEEccC-CCCCC--HHHHHHHHHhcCCeEEEEcchhHHHhhc----C---CC-CEEEEcCCCCCCCcchHHH
Q 041055 121 CLAIFSLGAILSPA-NSINT--ESEIVKQVRDSGAKLIISASEELQKLTK----V---NV-PIIVTSRDQSNNKSVSVEE 189 (526)
Q Consensus 121 ~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~---~~-~~i~~~~~~~~~~~~~~~~ 189 (526)
+|||+++|++++|+ ++.++ .+++.+++++++++++|++......+.. . .. .++.++...
T Consensus 109 ~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------- 178 (612)
T PRK12476 109 FFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIP---------- 178 (612)
T ss_pred HHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEecccc----------
Confidence 99999999999999 57776 7899999999999999998776554321 1 11 123322110
Q ss_pred HhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHH
Q 041055 190 LIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFF 269 (526)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 269 (526)
.... .........++++++|+|||||||.||||+++|+++.+.+......+.. +.++++.++.+|++|.+|+...
T Consensus 179 --~~~~--~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~~~~~~l~~~Pl~h~~g~~~~ 253 (612)
T PRK12476 179 --DSAG--ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDL-LDRNTHGVSWLPLYHDMGLSMI 253 (612)
T ss_pred --cccc--ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhcc-CCCCceEEEeCCcccccchHHH
Confidence 0000 0111113456899999999999999999999999998766654444331 3578899999999999998555
Q ss_pred HHhhcccCcEEEEec-CC--CHHHHHHHHH--hcCccEeecccHHHHHHHhhc-----cCCCCCCCceEEEEecCCCCHH
Q 041055 270 ATGLFCCGVTIVVMQ-RF--DLQAMIEAIK--TYQVNNIPLVPPVILGLVKYC-----KDSSYLTSLRRVGSGAAPLSKE 339 (526)
Q Consensus 270 ~~~~l~~G~~~v~~~-~~--~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~-----~~~~~l~~lr~v~~gG~~l~~~ 339 (526)
++.++..|.++++.+ .+ ++..+++.++ ++++++++.+|+++..++... ....+++++| +++||++++++
T Consensus 254 ~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~ 332 (612)
T PRK12476 254 GFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSID 332 (612)
T ss_pred HHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHH
Confidence 555555554444443 23 8899999995 589999999999988887641 1244688999 99999999999
Q ss_pred HHHHHHHhCC-----CCceeeccccccccceeecccCccc------------------------ccCCCCcccccCCCcE
Q 041055 340 LADEFRAKFP-----WVELRQGYGLTESCGATTFMVSPKQ------------------------ARARSGSCGALSPTFY 390 (526)
Q Consensus 340 ~~~~~~~~~~-----~~~l~~~yG~tE~~~~~~~~~~~~~------------------------~~~~~~~~G~~~~~~~ 390 (526)
+.++|.+.|+ ...+++.||+||++..++....... .....+++|+|.++++
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~ 412 (612)
T PRK12476 333 AVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQW 412 (612)
T ss_pred HHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCE
Confidence 9999999873 3459999999998765443211100 0001358899999999
Q ss_pred EEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC------------------CCeeeccceEEEcCCCcE
Q 041055 391 AKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE------------------DGWLKTGDLCYFDGEGFL 452 (526)
Q Consensus 391 ~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~------------------~~~~~TGD~~~~~~~G~l 452 (526)
++|+|++++.+++.|+.|||+++|++++.|||++++.|.+.|.. ++||+|||+|+++ ||+|
T Consensus 413 v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l 491 (612)
T PRK12476 413 AVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGEL 491 (612)
T ss_pred EEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEE
Confidence 99999776899999999999999999999999999999998841 3599999999985 9999
Q ss_pred EEEccccceEEecCeeeChHHHHHHHhc-CCCccc--EEEEeeeCCCCCceEEEEEEeCCCC-CCCHHHHHHHHHhcC
Q 041055 453 YIVDRIKELIKHNGYQVAPAELEAVLLS-HPNILD--AAVIPLEDEEAGQIPMAYVVRAAGS-QLTEDQVMQFVTSQL 526 (526)
Q Consensus 453 ~~~GR~~d~ik~~G~~v~~~eIE~~l~~-~~~v~~--~~vv~~~~~~~~~~~~a~vv~~~~~-~~~~~~l~~~l~~~l 526 (526)
+|+||+||+||++|++|+|.|||++|.+ ||.|.+ ++|++++++. ++.++++|+++++. ..++++|.++++++|
T Consensus 492 ~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l 568 (612)
T PRK12476 492 YITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAPAIDAIRAAV 568 (612)
T ss_pred EEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHHHHHHHHHHH
Confidence 9999999999999999999999999985 799999 7778888876 89999999998875 356777888877653
No 61
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-62 Score=516.13 Aligned_cols=488 Identities=26% Similarity=0.409 Sum_probs=390.5
Q ss_pred CceeecCCCCCCCCCCCCCCCCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCE
Q 041055 27 TGIYHSLIQLGENYRIPTRTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDV 106 (526)
Q Consensus 27 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~ 106 (526)
.++|........+..++.....++.+.+... ++..+ +++|+++. ++.+||.||.+++.++|.+|.+ +|+++||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-a~~~p--~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~-~gi~~gd~ 75 (557)
T PRK07059 2 EKIWLKSYPPGVPAEIDASQYPSLADLLEES-FRQYA--DRPAFICM--GKAITYGELDELSRALAAWLQS-RGLAKGAR 75 (557)
T ss_pred CCCccccCCCCCCCccCCCCCCCHHHHHHHH-HHHcC--CCceEEEc--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCE
Confidence 3566665544344444544446788888776 55666 79999874 6899999999999999999998 89999999
Q ss_pred EEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc----CCCCEEEEcC-C---
Q 041055 107 VFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK----VNVPIIVTSR-D--- 178 (526)
Q Consensus 107 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~i~~~~-~--- 178 (526)
|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++++++.....+.. ...+.+.+.. .
T Consensus 76 V~i~~~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (557)
T PRK07059 76 VAIMMPNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLL 155 (557)
T ss_pred EEEECCCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccc
Confidence 9999999999999999999999999999999999999999999999999998765443321 1222221111 0
Q ss_pred --------------------CCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHH
Q 041055 179 --------------------QSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQ 238 (526)
Q Consensus 179 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~ 238 (526)
........+.+....... .........++++++++|||||||.||+|.++|.++...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~ 234 (557)
T PRK07059 156 GFKGHIVNFVVRRVKKMVPAWSLPGHVRFNDALAEGAR-QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVL 234 (557)
T ss_pred cccccccccccccccccccccCCCCcccHHHHhhccCC-CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHH
Confidence 001112223332222111 11112245678999999999999999999999999987654
Q ss_pred HHhhhhccc--C---CCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHH
Q 041055 239 LLRWTVDVT--H---AQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILG 312 (526)
Q Consensus 239 ~~~~~~~~~--~---~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 312 (526)
......... . .....+++.+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+..+|+++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ 314 (557)
T PRK07059 235 QMEAWLQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNA 314 (557)
T ss_pred HHhhhhcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHH
Confidence 433222110 1 124577888999999987666667777777766665 4588999999999999999999999999
Q ss_pred HHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEE
Q 041055 313 LVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYA 391 (526)
Q Consensus 313 l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 391 (526)
+++. .....+++++|.++.||+++++.+.++|.+.+ ++++++.||+||++.+++...... ...++++|.|++++++
T Consensus 315 l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~vG~p~~g~~v 391 (557)
T PRK07059 315 LLNNPDFDKLDFSKLIVANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVDA--TEFSGTIGLPLPSTEV 391 (557)
T ss_pred HHcCcCcCcCCchhheEEEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCCC--CCcCCcccCccCCcEE
Confidence 9887 33445678999999999999999999999988 789999999999987665433221 2236799999999999
Q ss_pred EEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeCh
Q 041055 392 KVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAP 471 (526)
Q Consensus 392 ~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~ 471 (526)
+|+| +++++++.|+.|||+++|+.++.||+++++.+...|..+|||+|||+++++++|.+++.||.+|+||++|++|+|
T Consensus 392 ~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p 470 (557)
T PRK07059 392 SIRD-DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYP 470 (557)
T ss_pred EEEC-CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcH
Confidence 9999 567899999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 472 AELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 472 ~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
.+||++|.++|+|.+++|++.++...++.++++|+..+. ..+.++++++++++|
T Consensus 471 ~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~-~~~~~~l~~~~~~~l 524 (557)
T PRK07059 471 NEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDP-ALTEEDVKAFCKERL 524 (557)
T ss_pred HHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCC-CCCHHHHHHHHHHhc
Confidence 999999999999999999999998889999999887643 466788999988764
No 62
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=6.3e-63 Score=514.21 Aligned_cols=462 Identities=26% Similarity=0.390 Sum_probs=387.7
Q ss_pred hhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCC
Q 041055 50 TATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGA 129 (526)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 129 (526)
+++.+... +..+| +++|+.+. ++.+||+||.+++.++|++|.+ .|+++|++|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~-~~~~p--~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~ 75 (515)
T TIGR03098 2 LHHLLEDA-AARLP--DATALVHH--DRTLTYAALSERVLALASGLRG-LGLARGERVAIYLDKRLETVTAMFGAALAGG 75 (515)
T ss_pred HHHHHHHH-HHHCC--CCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhcCE
Confidence 34555555 55566 78999884 5789999999999999999988 8999999999999999999999999999999
Q ss_pred EEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCC----CCCcchHHHHhhhcCCCCC
Q 041055 130 ILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQS----NNKSVSVEELIECCDAADE 199 (526)
Q Consensus 130 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~----~~~~~~~~~~~~~~~~~~~ 199 (526)
+++|+++.++.+++..+++++++++++++......+... ... ++.++.... ......+.++......
T Consensus 76 ~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 152 (515)
T TIGR03098 76 VFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGDA--- 152 (515)
T ss_pred EEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhccccc---
Confidence 999999999999999999999999999987765543311 111 333332211 1112234333222111
Q ss_pred CCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcE
Q 041055 200 LPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVT 279 (526)
Q Consensus 200 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~ 279 (526)
.+......+++++++|||||||.||+|.+||+++...+......+. ..++|++++.+|++|.+++ ..++.++..|++
T Consensus 153 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~ 229 (515)
T TIGR03098 153 DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLE--NRPDDRLLAVLPLSFDYGF-NQLTTAFYVGAT 229 (515)
T ss_pred cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhC--CCcccEEEEECchhhHhHH-HHHHHHHHcCCE
Confidence 1111345678999999999999999999999999988777666655 6788999999999999998 567889999999
Q ss_pred EEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccc
Q 041055 280 IVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGL 359 (526)
Q Consensus 280 ~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~ 359 (526)
+++.+.++++.+++.++++++|++.++|+++..|.+.......++++|.+++||+++++++.+.+++.++++.+++.||+
T Consensus 230 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~ 309 (515)
T TIGR03098 230 VVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGL 309 (515)
T ss_pred EEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecc
Confidence 99999899999999999999999999999999998764444567899999999999999999999999988899999999
Q ss_pred ccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC-----
Q 041055 360 TESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE----- 434 (526)
Q Consensus 360 tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~----- 434 (526)
||++....... ......++++|+|+++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+.+.|..
T Consensus 310 tE~~~~~~~~~--~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~ 386 (515)
T TIGR03098 310 TEAFRSTYLPP--EEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRP 386 (515)
T ss_pred ccccceEeccc--ccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCcc
Confidence 99976544322 11122378999999999999999 56888999999999999999999999999998877643
Q ss_pred ------CCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeC
Q 041055 435 ------DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 435 ------~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~ 508 (526)
++||+|||+|+++++|++++.||.||+||.+|.+|+|.|||+++.++|.|.+++|++++++..|+.++++++..
T Consensus 387 ~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~ 466 (515)
T TIGR03098 387 GELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPP 466 (515)
T ss_pred ccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeC
Confidence 34899999999999999999999999999999999999999999999999999999999998999999999987
Q ss_pred CCCCCCHHHHHHHHHhcC
Q 041055 509 AGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 509 ~~~~~~~~~l~~~l~~~l 526 (526)
++...+.++++++++++|
T Consensus 467 ~~~~~~~~~l~~~l~~~l 484 (515)
T TIGR03098 467 GGEELDRAALLAECRARL 484 (515)
T ss_pred CCCCCCHHHHHHHHHhhC
Confidence 777778889999998875
No 63
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.6e-63 Score=519.79 Aligned_cols=465 Identities=27% Similarity=0.385 Sum_probs=366.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+++... ++.+| +++|++.. +.++||+||.++++++|++|.+ +|+++||+|+|+++|+++|++++|||+++
T Consensus 14 ~~~~~~l~~~-~~~~p--~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~-~Gl~~gd~Vai~~~n~~e~~~~~la~~~~ 87 (579)
T PLN03102 14 LTPITFLKRA-SECYP--NRTSIIYG--KTRFTWPQTYDRCCRLAASLIS-LNITKNDVVSVLAPNTPAMYEMHFAVPMA 87 (579)
T ss_pred ccHHHHHHHH-HHhCC--CCeEEEEC--CcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 5666766655 55666 79999874 5799999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----------CCCEEEEcCCCC----CCCcchHHHHhh
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----------NVPIIVTSRDQS----NNKSVSVEELIE 192 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----------~~~~i~~~~~~~----~~~~~~~~~~~~ 192 (526)
|++++|++|.++.+++.++++.++++++|++++....+... ..+++.++.... .....++.++..
T Consensus 88 G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (579)
T PLN03102 88 GAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLIQ 167 (579)
T ss_pred CcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHHh
Confidence 99999999999999999999999999999987665443311 234444432111 011223333332
Q ss_pred hcCCCCCCC---CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHH
Q 041055 193 CCDAADELP---GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFF 269 (526)
Q Consensus 193 ~~~~~~~~~---~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 269 (526)
......... .....++++++|+|||||||.||+|+++|+++..........+. ....++++..+|++|..++ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~--~~~~~~~l~~~pl~h~~g~-~~ 244 (579)
T PLN03102 168 RGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWE--MGTCPVYLWTLPMFHCNGW-TF 244 (579)
T ss_pred ccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcC--CCCCCeEEecCChhhhcch-hH
Confidence 211111000 01235689999999999999999999999997544333322222 4567889999999999998 45
Q ss_pred HHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhC
Q 041055 270 ATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKF 348 (526)
Q Consensus 270 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~ 348 (526)
.+.++..|+++++...+++..+++.|+++++|++.++|+++..|.+.. ......++++.+++||+++++.+.+++++ +
T Consensus 245 ~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~ 323 (579)
T PLN03102 245 TWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L 323 (579)
T ss_pred HHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c
Confidence 566788899998888889999999999999999999999999998863 23334567888999999999999999875 5
Q ss_pred CCCceeeccccccccceeecccCccc-----------ccCCCCcccccCCCcEEEEEeCCCCccCCC--CCcceEEEecc
Q 041055 349 PWVELRQGYGLTESCGATTFMVSPKQ-----------ARARSGSCGALSPTFYAKVVDTETRLALPP--YQRGELWLKSP 415 (526)
Q Consensus 349 ~~~~l~~~yG~tE~~~~~~~~~~~~~-----------~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~--g~~Gel~v~~~ 415 (526)
++++++.||+||+++.++....... .....+..+.+.+ .++++|.+++++++. ++.|||+++|+
T Consensus 324 -g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~ 400 (579)
T PLN03102 324 -GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGS 400 (579)
T ss_pred -CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECc
Confidence 6899999999999865443211100 0001233333444 456667666777764 36799999999
Q ss_pred ccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCC
Q 041055 416 TIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDE 495 (526)
Q Consensus 416 ~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~ 495 (526)
+++.|||++++.+.+.| .+|||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+||.|.+++|++++++
T Consensus 401 ~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~ 479 (579)
T PLN03102 401 SIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHP 479 (579)
T ss_pred chhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCc
Confidence 99999999999999999 57999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEEeCCCCCC----------CHHHHHHHHHhcC
Q 041055 496 EAGQIPMAYVVRAAGSQL----------TEDQVMQFVTSQL 526 (526)
Q Consensus 496 ~~~~~~~a~vv~~~~~~~----------~~~~l~~~l~~~l 526 (526)
..++.++|+|++.++... +..+++++++++|
T Consensus 480 ~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L 520 (579)
T PLN03102 480 TWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENL 520 (579)
T ss_pred cccceeEEEEEecCcccccccccccccccHHHHHHHHHhhc
Confidence 889999999998876443 3567899998875
No 64
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-62 Score=509.39 Aligned_cols=450 Identities=22% Similarity=0.311 Sum_probs=375.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... +. + +++|++.. ++.+||+||.+++.++|++|.+..|++++++|+++++|+++|+++++||+++
T Consensus 5 ~~~~~~l~~~-a~--~--~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~ 77 (529)
T PRK07867 5 PTVAELLLPL-AE--D--DDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALS 77 (529)
T ss_pred ccHHHHHHHh-cc--c--CCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 4677777655 33 3 68888874 6899999999999999999988338999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC--CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV--NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQL 205 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (526)
|++++|+++..+.+++.++++++++++++++++....+... ...++..+. ..+.+....... ........
T Consensus 78 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~-~~~~~~~~ 149 (529)
T PRK07867 78 GIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDS-------PAWADELAAHRD-AEPPFRVA 149 (529)
T ss_pred CCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEecc-------ccHHHHhcccCC-CCCCcccC
Confidence 99999999999999999999999999999998776654432 222332221 112222221111 11112245
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR 285 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~ 285 (526)
.++++++++|||||||.||+|+++|+++..........++ +.++|+++..+|++|.+++...++.++..|+++++.+.
T Consensus 150 ~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~ 227 (529)
T PRK07867 150 DPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFG--LGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRK 227 (529)
T ss_pred CccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhC--CCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCC
Confidence 6789999999999999999999999999887777666665 67889999999999999987777788999999999988
Q ss_pred CCHHHHHHHHHhcCccEeecccHHHHHHHhhccC-CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccc
Q 041055 286 FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD-SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCG 364 (526)
Q Consensus 286 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~ 364 (526)
+++..+++.++++++|++.++|+.+..++..... ....+++|. ++||+.+++.. +++.+.+ ++++++.||+||++.
T Consensus 228 ~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~ 304 (529)
T PRK07867 228 FSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGV 304 (529)
T ss_pred CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeeccccccc
Confidence 9999999999999999999999999988875322 223356774 56888887765 6777788 789999999999986
Q ss_pred eeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCC------------cceEEE-eccccccccCCCHHHHhcc
Q 041055 365 ATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQ------------RGELWL-KSPTIMRGYFGNEEATAAA 431 (526)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~------------~Gel~v-~~~~~~~gy~~~~~~t~~~ 431 (526)
.+.... . ...+++|.|.++ ++++|++++.+++.|+ .|||++ +|++++.||+++++.+.+.
T Consensus 305 ~~~~~~--~---~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~ 377 (529)
T PRK07867 305 AITRTP--D---TPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAER 377 (529)
T ss_pred ccccCC--C---CCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhh
Confidence 544221 1 125789999999 7788877888899998 999999 9999999999999999988
Q ss_pred cCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCC
Q 041055 432 FDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGS 511 (526)
Q Consensus 432 ~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~ 511 (526)
| .+|||+|||+++++++|.+++.||.||+||++|++|+|.|||++|.+||+|.+++|++++++..|++++++|+..++.
T Consensus 378 ~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~ 456 (529)
T PRK07867 378 M-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGA 456 (529)
T ss_pred h-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCC
Confidence 8 589999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCHHHHHHHHHhc
Q 041055 512 QLTEDQVMQFVTSQ 525 (526)
Q Consensus 512 ~~~~~~l~~~l~~~ 525 (526)
..+.++++++++++
T Consensus 457 ~~~~~~l~~~~~~~ 470 (529)
T PRK07867 457 KFDPDAFAEFLAAQ 470 (529)
T ss_pred CCCHHHHHHHHHhh
Confidence 88889999999864
No 65
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-62 Score=515.00 Aligned_cols=467 Identities=24% Similarity=0.338 Sum_probs=382.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+++... ++..+ +++|+++ .++.+||+||.+++.++|+.|.+ +|+++||+|+++++|+++|+++++||+++
T Consensus 10 ~~l~~~l~~~-a~~~p--~~~a~~~--~~~~~Ty~~L~~~~~~~a~~L~~-~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 10 DTLASLLDAH-ARARP--DAVALID--EDRPLSRAELRALVDRLAAWLAA-QGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred CCHHHHHHHH-HHhCC--CCeEEec--CCCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 5788888766 66666 7999986 46899999999999999999997 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH-----HHhhc------CCCC-EEEEcCCCC-CCCc--chHHHHhh
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEEL-----QKLTK------VNVP-IIVTSRDQS-NNKS--VSVEELIE 192 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~------~~~~-~i~~~~~~~-~~~~--~~~~~~~~ 192 (526)
|++++|+++..+.+++.++++++++++++++++.. ..+.. ...+ ++.++.... .... ..+.....
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLFA 163 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCccccccccc
Confidence 99999999999999999999999999999987632 11111 0112 223321100 0000 00000000
Q ss_pred hcCCCCCCC--CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHH
Q 041055 193 CCDAADELP--GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFA 270 (526)
Q Consensus 193 ~~~~~~~~~--~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~ 270 (526)
......... .....++++++++|||||||.||+|.++|+++..........++ ..+++++++.+|++|.+|+ ..+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~~~~l~~~p~~~~~g~-~~~ 240 (540)
T PRK06164 164 LPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYG--YDPGAVLLAALPFCGVFGF-STL 240 (540)
T ss_pred ccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcC--CCCCCEEEEcCCchhHHHH-HHH
Confidence 000000000 01234678999999999999999999999999988887777766 5689999999999999999 678
Q ss_pred HhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEec-CCCCHHHHHHHHHhCC
Q 041055 271 TGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGA-APLSKELADEFRAKFP 349 (526)
Q Consensus 271 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG-~~l~~~~~~~~~~~~~ 349 (526)
+.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+......+++++|.+..+| .+...++.+++.+.
T Consensus 241 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-- 318 (540)
T PRK06164 241 LGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAGERADFPSARLFGFASFAPALGELAALARAR-- 318 (540)
T ss_pred HHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhcccCCCcceeeeeeccCCcchHHHHHHHhhc--
Confidence 899999999999999999999999999999999999999999988745567788999887766 55666777776665
Q ss_pred CCceeeccccccccceeecccCcccccCCCCcccccC-CCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHH
Q 041055 350 WVELRQGYGLTESCGATTFMVSPKQARARSGSCGALS-PTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEAT 428 (526)
Q Consensus 350 ~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t 428 (526)
++++++.||+||++.+++.............+.|.+. +++.++|+|++++.+++.|+.|||||+|++++.||+++++.|
T Consensus 319 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t 398 (540)
T PRK06164 319 GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDAT 398 (540)
T ss_pred CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhh
Confidence 6899999999999876655433222222245667775 899999999989999999999999999999999999999999
Q ss_pred hcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeC
Q 041055 429 AAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 429 ~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~ 508 (526)
.+.|..++||+|||+|+++++|.+++.||.||+||++|++|+|.|||++|.++|.|.+++|++.+. ..++.++++|++.
T Consensus 399 ~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~~~~~~vv~~ 477 (540)
T PRK06164 399 ARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKTVPVAFVIPT 477 (540)
T ss_pred hhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCceeEEEEEEeC
Confidence 999988999999999999999999999999999999999999999999999999999999999884 4568899999998
Q ss_pred CCCCCCHHHHHHHHHhcC
Q 041055 509 AGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 509 ~~~~~~~~~l~~~l~~~l 526 (526)
++...+.++++++|+++|
T Consensus 478 ~~~~~~~~~l~~~~~~~l 495 (540)
T PRK06164 478 DGASPDEAGLMAACREAL 495 (540)
T ss_pred CCCCCCHHHHHHHHHhhc
Confidence 887788899999999875
No 66
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.4e-63 Score=531.32 Aligned_cols=455 Identities=21% Similarity=0.313 Sum_probs=364.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+.+. ++++++ +++|+.+. ..+.+||+||.++++++|++|.+ + +++||+|+++++|+++|++++|||+++
T Consensus 204 ~t~~~~l~~~-~~~~p~-~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~Val~~~n~~e~~~~~lA~~~~ 278 (718)
T PRK08043 204 ETLYEALLSA-QYRYGA-GKPCIEDV-NFTPDSYRKLLKKTLFVGRILEK-Y-SVEGERIGLMLPNATISAAVIFGASLR 278 (718)
T ss_pred CCHHHHHHHH-HHHhCC-CCcceEcC-CCCcccHHHHHHHHHHHHHHHHH-h-cCCCceEEEEcCCcHHHHHHHHHHHHc
Confidence 5667766665 555552 25777652 34789999999999999999987 5 599999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc--C-----CCCEEEEcCCCCCCCcchHHHH--hhhcCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK--V-----NVPIIVTSRDQSNNKSVSVEEL--IECCDAAD 198 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~-----~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~ 198 (526)
|++++|+++.++.+++.++++++++++++++.+..+.... . ....+.++.... ...+... ........
T Consensus 279 G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~ 355 (718)
T PRK08043 279 RRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKD---DVTTADKLWIFAHLLMP 355 (718)
T ss_pred CCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhh---hcchhHHHHHHHHHhCC
Confidence 9999999999999999999999999999998775443110 0 112333221100 0011110 00000000
Q ss_pred CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCc
Q 041055 199 ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGV 278 (526)
Q Consensus 199 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~ 278 (526)
........++++++++|||||||.||||++||+++.+.+......++ +.++|++++.+|++|.+|+...++.++..|+
T Consensus 356 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~--~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~ 433 (718)
T PRK08043 356 RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIAD--FTPNDRFMSALPLFHSFGLTVGLFTPLLTGA 433 (718)
T ss_pred ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhC--CCccCeEEEcCcchhhhhhHHHHHHHHHcCC
Confidence 11111346789999999999999999999999999988777666555 6789999999999999998777889999999
Q ss_pred EEEEecC-CCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 279 TIVVMQR-FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 279 ~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
++++.+. ++...+++.++++++|++.++|+++..+.+.. ...++++||.+++||+++++++.+.|++.+ ++++++.|
T Consensus 434 ~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~-~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~Y 511 (718)
T PRK08043 434 EVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA-NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGY 511 (718)
T ss_pred EEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc-CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeeccc
Confidence 9998864 57788899999999999999999998876642 345678999999999999999999999998 78999999
Q ss_pred ccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCC--CHHH-------H
Q 041055 358 GLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFG--NEEA-------T 428 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~--~~~~-------t 428 (526)
|+||++..++...+. ...++++|+|.||++++++|.+ + .++.|||+++|++++.||++ +++. +
T Consensus 512 G~TE~~~~~~~~~~~---~~~~~svG~p~pg~~~~i~d~~-~----~~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~ 583 (718)
T PRK08043 512 GVTECAPVVSINVPM---AAKPGTVGRILPGMDARLLSVP-G----IEQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAEN 583 (718)
T ss_pred CcccccceEEecCCc---ccCCCCCCCcCCCCeeEEecCC-C----CCCceEEEEecCCccccccCCCCccccccccccc
Confidence 999998766543221 1237899999999999999854 2 24669999999999999998 4442 2
Q ss_pred hcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeC
Q 041055 429 AAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 429 ~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~ 508 (526)
.+.+..+|||+|||+|++|+||++++.||.||+||++|++|+|.|||+++.+++.+.+++|++.+++..|+.++++++
T Consensus 584 ~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~-- 661 (718)
T PRK08043 584 ARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT-- 661 (718)
T ss_pred ccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc--
Confidence 223345799999999999999999999999999999999999999999999999999999999999888999988874
Q ss_pred CCCCCCHHHHHHHHHhc
Q 041055 509 AGSQLTEDQVMQFVTSQ 525 (526)
Q Consensus 509 ~~~~~~~~~l~~~l~~~ 525 (526)
+...+.++++++++++
T Consensus 662 -~~~~~~~~l~~~~~~~ 677 (718)
T PRK08043 662 -DSELTREKLQQYAREH 677 (718)
T ss_pred -CcccCHHHHHHHHHhc
Confidence 4456788999999876
No 67
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-62 Score=511.12 Aligned_cols=464 Identities=27% Similarity=0.417 Sum_probs=381.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.|+.+++... +++.+ +++|+++. ++.+||+||.+++.++|..|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 7 ~~~~~~~~~~-a~~~p--~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 80 (528)
T PRK07470 7 MNLAHFLRQA-ARRFP--DRIALVWG--DRSWTWREIDARVDALAAALAA-RGVRKGDRILVHSRNCNQMFESMFAAFRL 80 (528)
T ss_pred CCHHHHHHHH-HHHCC--CceEEEEC--CccccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 6788877766 66666 79999884 6789999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc-----CCCC-EEEEcCCCCCCCcchHHHHhhhcCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK-----VNVP-IIVTSRDQSNNKSVSVEELIECCDAADELP 201 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-----~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (526)
|++++|+++.++.+++.++++.++++.++++.+....+.. .... ++.+.... ....+.++...... ....
T Consensus 81 G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~ 156 (528)
T PRK07470 81 GAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGAR---AGLDYEALVARHLG-ARVA 156 (528)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCc---ccccHHHHHhcCCC-CCCC
Confidence 9999999999999999999999999999999875444321 1122 23332211 12234433322111 1111
Q ss_pred CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEE
Q 041055 202 GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIV 281 (526)
Q Consensus 202 ~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 281 (526)
.....++++++++|||||||.||+|.++|+++...+............+.|+++..+|++|.+++ ..++ .+..|++.+
T Consensus 157 ~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~-~~~~g~~~~ 234 (528)
T PRK07470 157 NAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGI-HQLC-QVARGAATV 234 (528)
T ss_pred cccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHH-HHHH-HHhcCceEE
Confidence 22456789999999999999999999999998765443222221124678999999999999998 4444 455666666
Q ss_pred Eec--CCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccc
Q 041055 282 VMQ--RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYG 358 (526)
Q Consensus 282 ~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG 358 (526)
+.+ .++++.+++.++++++|++.++|++++.+.+.. .....++++|.+++||++++++..+++.+.+ +..+++.||
T Consensus 235 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG 313 (528)
T PRK07470 235 LLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFG 313 (528)
T ss_pred EecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCC
Confidence 554 578999999999999999999999999998763 3456788999999999999999999999988 578999999
Q ss_pred cccccceeecccCcc-----cccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccC
Q 041055 359 LTESCGATTFMVSPK-----QARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFD 433 (526)
Q Consensus 359 ~tE~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~ 433 (526)
+||+++.++...... ......+++|+|.++++++++| +++++++.|+.|||+++|+.++.||+++++.+.+.|
T Consensus 314 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~- 391 (528)
T PRK07470 314 LGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF- 391 (528)
T ss_pred CcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-
Confidence 999987665432110 0112257899999999999999 568899999999999999999999999999999888
Q ss_pred CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCC
Q 041055 434 EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQL 513 (526)
Q Consensus 434 ~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~ 513 (526)
.++||+|||++++++||++++.||.||+||++|++|+|.+||++|.++|.|.+++|++.+++..|+.++++++..++...
T Consensus 392 ~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 471 (528)
T PRK07470 392 RDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGAPV 471 (528)
T ss_pred cCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999998889999999999887778
Q ss_pred CHHHHHHHHHhcC
Q 041055 514 TEDQVMQFVTSQL 526 (526)
Q Consensus 514 ~~~~l~~~l~~~l 526 (526)
+.++++++|+++|
T Consensus 472 ~~~~~~~~l~~~l 484 (528)
T PRK07470 472 DEAELLAWLDGKV 484 (528)
T ss_pred CHHHHHHHHHHhh
Confidence 8889999998764
No 68
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.8e-62 Score=509.19 Aligned_cols=448 Identities=22% Similarity=0.295 Sum_probs=368.2
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGV-RKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
++.+.+.++ + .+ +++|+++. +..+||+||.+++.++|.+|.+ +|+ ++||+|+++++|+++++++++||+++
T Consensus 4 ~~~~~l~~~-~--~p--~~~Al~~~--~~~lTy~el~~~~~~la~~L~~-~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~ 75 (540)
T PRK13388 4 TIAQLLRDR-A--GD--DTIAVRYG--DRTWTWREVLAEAAARAAALIA-LADPDRPLHVGVLLGNTPEMLFWLAAAALG 75 (540)
T ss_pred hHHHHHHhh-c--cC--CceEEEEC--CceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCcHHHHHHHHHHhC
Confidence 466666654 2 34 79999984 6799999999999999999998 999 79999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC---CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV---NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQ 204 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (526)
|++++|++|.++.+++.+++++++++++|++.+....+... ...++.++.. .+.+....... ..+...
T Consensus 76 Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~--~~~~~~ 146 (540)
T PRK13388 76 GYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTP-------AYAELVAAAGA--LTPHRE 146 (540)
T ss_pred CCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccch-------hhhhhhccccC--cCCCCC
Confidence 99999999999999999999999999999988766555432 2233333211 12222211111 111123
Q ss_pred CCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 205 LTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 205 ~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
..++++++++|||||||.||+|.++|+++..........++ ..++|+++..+|++|.+++...++.++..|+++++.+
T Consensus 147 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~ 224 (540)
T PRK13388 147 VDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFG--LTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPA 224 (540)
T ss_pred CCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhC--CCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECC
Confidence 56789999999999999999999999999887777666666 6789999999999999998666667889999999988
Q ss_pred CCCHHHHHHHHHhcCccEeecccHHHHHHHhhccC-CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccc
Q 041055 285 RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD-SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESC 363 (526)
Q Consensus 285 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~ 363 (526)
.+++..+++.++++++|++..+|+.+..+++.... .....+++.+ .|++++++..+.|.+.+ ++++++.||+||++
T Consensus 225 ~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~--~G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~ 301 (540)
T PRK13388 225 KFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA--FGNEASPRDIAEFSRRF-GCQVEDGYGSSEGA 301 (540)
T ss_pred CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE--ECCCCCHHHHHHHHHHh-CCceeccccccccc
Confidence 89999999999999999999999999988875322 1223456643 36677888889999988 78999999999998
Q ss_pred ceeecccCcccccCCCCcccccCCCcEEE-----------EEeCCCCccC-CCCCcceEEEe-ccccccccCCCHHHHhc
Q 041055 364 GATTFMVSPKQARARSGSCGALSPTFYAK-----------VVDTETRLAL-PPYQRGELWLK-SPTIMRGYFGNEEATAA 430 (526)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-----------ivd~~~~~~~-~~g~~Gel~v~-~~~~~~gy~~~~~~t~~ 430 (526)
.++.... ....+++|+|++++++. ++| ++|+.+ +++..|||+++ |++++.||+++++.+.+
T Consensus 302 ~~~~~~~-----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~ 375 (540)
T PRK13388 302 VIVVREP-----GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAE 375 (540)
T ss_pred ceeecCC-----CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHH
Confidence 7665321 11267899999997642 333 334444 45678999998 99999999999999999
Q ss_pred ccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCC
Q 041055 431 AFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAG 510 (526)
Q Consensus 431 ~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~ 510 (526)
.| .+|||+|||+|++++||++++.||.||+||++|++|+|.|||++|.++|.|.+|+|++++++..|+.+++++++.++
T Consensus 376 ~~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~ 454 (540)
T PRK13388 376 RM-RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDG 454 (540)
T ss_pred Hh-hcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCC
Confidence 88 57999999999999999999999999999999999999999999999999999999999998889999999999888
Q ss_pred CCCCHHHHHHHHHhc
Q 041055 511 SQLTEDQVMQFVTSQ 525 (526)
Q Consensus 511 ~~~~~~~l~~~l~~~ 525 (526)
...+.++++++++++
T Consensus 455 ~~~~~~~l~~~l~~~ 469 (540)
T PRK13388 455 ATFDPDAFAAFLAAQ 469 (540)
T ss_pred CcCCHHHHHHHHHhh
Confidence 888888999999754
No 69
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.4e-63 Score=515.65 Aligned_cols=446 Identities=19% Similarity=0.271 Sum_probs=344.4
Q ss_pred hhhhhcccCCCCCCCCCceEEEeCCCC--ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 50 TATCVLSRFPHPDLAESRVALIDSATH--ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
+.+.+... +++.+ +++|+++.+.+ +++||+||.++++++|++|.+ + ++||+|+++++|++++++++|||+++
T Consensus 4 ~~~~l~~~-~~~~~--~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-~--~~g~~V~l~~~~~~e~~~~~la~~~~ 77 (525)
T PRK05851 4 LAAALSDA-MTASG--RDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-R--DRPGAVGLVGEPTVELVAAIQGAWLA 77 (525)
T ss_pred HHHHHHHH-hcCCC--CceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-c--CCCCeEEEEcCCCHHHHHHHHHHHHc
Confidence 55666666 55666 79999986433 789999999999999999987 5 89999999999999999999999999
Q ss_pred CCEEccCCC-------CCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCC
Q 041055 128 GAILSPANS-------INTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADEL 200 (526)
Q Consensus 128 G~~~v~l~~-------~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (526)
|+++++.+. ....+++.++++++++++++++......+...... +.+.. +....... ...
T Consensus 78 G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~---~~~ 144 (525)
T PRK05851 78 GAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-VTVHD---------LATAAHTN---RSA 144 (525)
T ss_pred CCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-ccccc---------cccccccc---ccc
Confidence 998654321 12235566789999999999987765544321111 11100 00000000 000
Q ss_pred CCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCC-CCcEEEEeCChhHHHHHHHHHHhhcccCcE
Q 041055 201 PGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHA-QNDIFLCMIPMFHIYGLAFFATGLFCCGVT 279 (526)
Q Consensus 201 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~-~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~ 279 (526)
+.....++++++|+|||||||.||||+++|+++.+.+......++ .. ++|++++.+|++|.+|+ ..++.++..|++
T Consensus 145 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~ 221 (525)
T PRK05851 145 SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVG--LDAATDVGCSWLPLYHDMGL-AFLLTAALAGAP 221 (525)
T ss_pred cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhC--CCCCCCeEEEcCCCccCccH-HHHHHHHHcCCe
Confidence 111246789999999999999999999999999988887766665 56 78999999999999999 567789999999
Q ss_pred EEEecC--C--CHHHHHHHHHhcCccEeecccHHHHHHH-hhc--cCCCCCCCceEEEEecCCCCHHHHHHHHHh---C-
Q 041055 280 IVVMQR--F--DLQAMIEAIKTYQVNNIPLVPPVILGLV-KYC--KDSSYLTSLRRVGSGAAPLSKELADEFRAK---F- 348 (526)
Q Consensus 280 ~v~~~~--~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~-~~~--~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~---~- 348 (526)
+++.+. + ++..+++.++++++|++.. |+++..++ +.. ....+++++|.+++||+++++++.++|.+. +
T Consensus 222 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~-p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g 300 (525)
T PRK05851 222 LWLAPTTAFSASPFRWLSWLSDSRATLTAA-PNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFG 300 (525)
T ss_pred EEEcCHHHHHHCHHHHHHHHHHhCCeEEeC-CcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcC
Confidence 998762 4 5788999999999998755 55544443 322 234567899999999999999999999875 2
Q ss_pred -CCCceeeccccccccceeecccCcc----------c--ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecc
Q 041055 349 -PWVELRQGYGLTESCGATTFMVSPK----------Q--ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSP 415 (526)
Q Consensus 349 -~~~~l~~~yG~tE~~~~~~~~~~~~----------~--~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~ 415 (526)
+...+++.||+||++..++...... . .....+++|+|++|++++|+|++++.+++.|+.|||+++|+
T Consensus 301 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~ 380 (525)
T PRK05851 301 FDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGA 380 (525)
T ss_pred CChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecC
Confidence 2346999999999986655432110 0 01124689999999999999977666799999999999999
Q ss_pred ccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCC
Q 041055 416 TIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDE 495 (526)
Q Consensus 416 ~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~ 495 (526)
+++.||+++++.+ .+|||+|||+|+++ +|.++++||.||+||++|++|+|.|||++|.+||.|.+++|++++++
T Consensus 381 ~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~ 454 (525)
T PRK05851 381 SMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTG 454 (525)
T ss_pred chhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEec
Confidence 9999999998643 57899999999997 79999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEEEEeCCCCCCCHHHHHHHHHhc
Q 041055 496 EAGQIPMAYVVRAAGSQLTEDQVMQFVTSQ 525 (526)
Q Consensus 496 ~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~ 525 (526)
..++.+.++|+.... ..+.++++++++++
T Consensus 455 ~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~ 483 (525)
T PRK05851 455 EGSARPGLVIAAEFR-GPDEAGARSEVVQR 483 (525)
T ss_pred CCCCceeEEEEEEec-CcchHHHHHHHHHH
Confidence 888888887765421 23445555555544
No 70
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.9e-63 Score=604.90 Aligned_cols=454 Identities=22% Similarity=0.295 Sum_probs=390.6
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++++++..+ +++.| +++|+++. ++++||+||.+++.++|+.|.+ +|+++|++|+++++|++++++++|||+++
T Consensus 3095 ~~~~~l~~~~-a~~~p--~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~vv~~lavl~a 3168 (3956)
T PRK12467 3095 RLVHQLIEAQ-VARTP--EAPALVFG--DQQLSYAELNRRANRLAHRLIA-IGVGPDVLVGVAVERSVEMIVALLAVLKA 3168 (3956)
T ss_pred ccHHHHHHHH-HHhCC--CcceEeeC--CcccCHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 5788888777 66677 79999984 6789999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLT 206 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (526)
|++++|++|.++.+++.++++++++++++++......+... ....+.++.... . ... ...+.....
T Consensus 3169 Ga~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~-~~~~~~~~~ 3235 (3956)
T PRK12467 3169 GGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDL-----------N-GYS-ENNPSTRVM 3235 (3956)
T ss_pred CcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhh-----------c-ccC-CCCCcccCC
Confidence 99999999999999999999999999999998766554321 222333322100 0 000 111222457
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC-
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR- 285 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~- 285 (526)
++++++|+|||||||+||||+++|+++.+.+......++ +.++|+++...|++|..+. ..++.++..|+++++.+.
T Consensus 3236 ~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l~i~~~~ 3312 (3956)
T PRK12467 3236 GENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYE--LDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCLVVRDND 3312 (3956)
T ss_pred CCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcC--CCcCCEEEEecCccHhHHH-HHHHHHHhCCCEEEECCcc
Confidence 899999999999999999999999999999888877776 6789999999999999887 778999999999999875
Q ss_pred -CCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccc
Q 041055 286 -FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCG 364 (526)
Q Consensus 286 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~ 364 (526)
+++..+++.|+++++|++.++|+++..+++.. ...++++||.+++|||++++++.++|.+.++++.+++.||+||++.
T Consensus 3313 ~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~-~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 3391 (3956)
T PRK12467 3313 LWDPEELWQAIHAHRISIACFPPAYLQQFAEDA-GGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVV 3391 (3956)
T ss_pred cCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc-cccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEe
Confidence 78999999999999999999999999998652 2456789999999999999999999999998899999999999987
Q ss_pred eeecccCcccc--cCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCC------
Q 041055 365 ATTFMVSPKQA--RARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDG------ 436 (526)
Q Consensus 365 ~~~~~~~~~~~--~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~------ 436 (526)
.++........ .....++|+|++|++++|+| +.++++|.|+.|||+|+|+++++||+++|+.|+++|..++
T Consensus 3392 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~ 3470 (3956)
T PRK12467 3392 TVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGG 3470 (3956)
T ss_pred eeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCc
Confidence 66543322111 11246899999999999999 6688999999999999999999999999999999996554
Q ss_pred -eeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH
Q 041055 437 -WLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE 515 (526)
Q Consensus 437 -~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~ 515 (526)
||+|||+|++++||+++++||+|++||++|++|+|.|||++|.++|+|.+++|++.++ ..++.++|||++.++.....
T Consensus 3471 r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~-~~~~~lva~v~~~~~~~~~~ 3549 (3956)
T PRK12467 3471 RLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDG-AGGKQLVAYVVPADPQGDWR 3549 (3956)
T ss_pred eeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEecC-CCCcEEEEEEeCCCCCcccH
Confidence 5999999999999999999999999999999999999999999999999999998754 46789999999887666777
Q ss_pred HHHHHHHHhcC
Q 041055 516 DQVMQFVTSQL 526 (526)
Q Consensus 516 ~~l~~~l~~~l 526 (526)
++++++++++|
T Consensus 3550 ~~l~~~l~~~L 3560 (3956)
T PRK12467 3550 ETLRDHLAASL 3560 (3956)
T ss_pred HHHHHHHhccC
Confidence 89999999875
No 71
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.1e-62 Score=510.51 Aligned_cols=471 Identities=27% Similarity=0.411 Sum_probs=383.4
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|+.+. ++.+||.||.+++.++|.+|.+ +|+++|++|+++++|+++++++++||+++
T Consensus 33 ~~l~~~l~~~-a~~~p--~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 106 (567)
T PRK06178 33 RPLTEYLRAW-ARERP--QRPAIIFY--GHVITYAELDELSDRFAALLRQ-RGVGAGDRVAVFLPNCPQFHIVFFGILKL 106 (567)
T ss_pred ccHHHHHHHH-HHHCC--CceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCcHHHHHHHHHHHh
Confidence 5788887766 56666 79999874 6799999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC----CCCEEEEcC-CCCCC-----C-----------cch
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV----NVPIIVTSR-DQSNN-----K-----------SVS 186 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~i~~~~-~~~~~-----~-----------~~~ 186 (526)
|++++|++|..+.+++.+++++++++++++++...+.+... ....+.... ....+ . ...
T Consensus 107 G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (567)
T PRK06178 107 GAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAG 186 (567)
T ss_pred CeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999998776654421 222222111 00000 0 000
Q ss_pred HHHHhhhcCC-CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHH
Q 041055 187 VEELIECCDA-ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYG 265 (526)
Q Consensus 187 ~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 265 (526)
+.+....... ..........++++++++|||||||.||+|++||+++........... ....+++++++.+|++|++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~g 265 (567)
T PRK06178 187 AIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA-VVGGEDSVFLSFLPEFWIAG 265 (567)
T ss_pred cccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh-ccCCCCcEEEEecchHHHHH
Confidence 1111111100 011111235678999999999999999999999999887655433221 22578899999999999999
Q ss_pred HHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEe--cCCCCHHHHH
Q 041055 266 LAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSG--AAPLSKELAD 342 (526)
Q Consensus 266 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~g--G~~l~~~~~~ 342 (526)
+...++.++..|+++++.+++++..+++.++++++|.+.++|..+..+++. .....++++++.+..+ ++++++++.+
T Consensus 266 ~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 345 (567)
T PRK06178 266 ENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQ 345 (567)
T ss_pred HHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHH
Confidence 877788889999999999999999999999999999999999999988876 2334567788876544 5899999999
Q ss_pred HHHHhCCCCceeeccccccccceeecccCcc----cccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccc
Q 041055 343 EFRAKFPWVELRQGYGLTESCGATTFMVSPK----QARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIM 418 (526)
Q Consensus 343 ~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~----~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~ 418 (526)
.|++.++...+.+.||+||++..+....... .....++++|+|+||++++++|++++++++.|+.|||+++|++++
T Consensus 346 ~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g~~v~ 425 (567)
T PRK06178 346 RWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRTPSLL 425 (567)
T ss_pred HHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEECCccc
Confidence 9999985333345799999876544322111 111235779999999999999988899999999999999999999
Q ss_pred cccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCC
Q 041055 419 RGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAG 498 (526)
Q Consensus 419 ~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~ 498 (526)
.||+++++.+.+.| .+|||+|||++++++||+++++||.+|+||.+|.+|+|.|||+++.++|.|.+++|++.+++..+
T Consensus 426 ~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g 504 (567)
T PRK06178 426 KGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKG 504 (567)
T ss_pred ccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccC
Confidence 99999999999888 57899999999999999999999999999999999999999999999999999999999988888
Q ss_pred ceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 499 QIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 499 ~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+.++++|++.++...+++++++++++++
T Consensus 505 ~~~~~~v~~~~~~~~~~~~l~~~~~~~l 532 (567)
T PRK06178 505 QVPVAFVQLKPGADLTAAALQAWCRENM 532 (567)
T ss_pred cceEEEEEeCCCCcCCHHHHHHHHHhcC
Confidence 9999999998887788899999999875
No 72
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=4.6e-62 Score=508.74 Aligned_cols=457 Identities=25% Similarity=0.374 Sum_probs=381.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++ | +++|+++. ++.+||+||.+++.++|..|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 25 ~~~~~~~~~~-a~--p--~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~v~~~n~~~~~~~~la~~~~ 96 (536)
T PRK10946 25 LPLTDILTRH-AA--S--DAIAVICG--ERQFSYRELNQASDNLACSLRR-QGIKPGDTALVQLGNVAEFYITFFALLKL 96 (536)
T ss_pred ccHHHHHHHh-hC--C--CCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCChHHHHHHHHHHHHc
Confidence 4677877665 44 4 79999984 6889999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh--------HHHhhc--CCCCEEEEcCCCCCCCcchHHHHhhhcCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEE--------LQKLTK--VNVPIIVTSRDQSNNKSVSVEELIECCDAA 197 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--------~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 197 (526)
|+++++..+.....++.++++++++++++++... ...+.. .....+..... .....+.+......
T Consensus 97 G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-- 171 (536)
T PRK10946 97 GVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLND---DGEHSLDDAINHPA-- 171 (536)
T ss_pred CeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecC---CCCccHHHHhhCcc--
Confidence 9988887777788899999999999999987542 222221 12223333221 11222333322211
Q ss_pred CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHH-HHHhhccc
Q 041055 198 DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAF-FATGLFCC 276 (526)
Q Consensus 198 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~-~~~~~l~~ 276 (526)
...+.....++++++++|||||||.||+|+++|+++...+......+. ..+++++++.+|++|.+++.. .++.++..
T Consensus 172 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~--~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~ 249 (536)
T PRK10946 172 EDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICG--FTPQTRYLCALPAAHNYPMSSPGALGVFLA 249 (536)
T ss_pred cccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcC--CCCCceEEEecCccccccchhhhHHHHhhc
Confidence 111122446789999999999999999999999999998887766666 678899999999999988743 46788999
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh---ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCce
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY---CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVEL 353 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~---~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l 353 (526)
|+++++.+.+++..+++.++++++|++.++|+++..+++. ......++++|.+++||+++++++.+++.+.+ ++++
T Consensus 250 g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~ 328 (536)
T PRK10946 250 GGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQL 328 (536)
T ss_pred CcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeE
Confidence 9999999889999999999999999999999999999875 22345678999999999999999999999988 7899
Q ss_pred eeccccccccceeecccCcccccCCCCcccccC-CCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhccc
Q 041055 354 RQGYGLTESCGATTFMVSPKQARARSGSCGALS-PTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAF 432 (526)
Q Consensus 354 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~ 432 (526)
++.||+||++..... ..... ....+++|+|+ |++.++++| ++++++++|+.|||+++|+.++.||+++++.|.+.|
T Consensus 329 ~~~YG~tE~~~~~~~-~~~~~-~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~ 405 (536)
T PRK10946 329 QQVFGMAEGLVNYTR-LDDSD-ERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAF 405 (536)
T ss_pred EEeecccccceeeec-CCCcc-ccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhc
Confidence 999999997544332 21111 12267899998 799999999 568899999999999999999999999999999999
Q ss_pred CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC
Q 041055 433 DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ 512 (526)
Q Consensus 433 ~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~ 512 (526)
+.++||+|||+|++|++|++++.||.+|++|++|++|+|.+||++|.++|+|.+++|++++++..|+.++++|+++++
T Consensus 406 ~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~-- 483 (536)
T PRK10946 406 DANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEP-- 483 (536)
T ss_pred ccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCC--
Confidence 889999999999999999999999999999999999999999999999999999999999998889999999998765
Q ss_pred CCHHHHHHHHHhc
Q 041055 513 LTEDQVMQFVTSQ 525 (526)
Q Consensus 513 ~~~~~l~~~l~~~ 525 (526)
.+.++++++++++
T Consensus 484 ~~~~~l~~~~~~~ 496 (536)
T PRK10946 484 LKAVQLRRFLREQ 496 (536)
T ss_pred CCHHHHHHHHHhC
Confidence 6778999999864
No 73
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-62 Score=507.96 Aligned_cols=447 Identities=23% Similarity=0.301 Sum_probs=372.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.|+.+.+... ++..| +++|+++. ++.+||+||.+++.++|++|.+ .|+++||+|+++++|++++++++|||+++
T Consensus 35 ~~~~~~~~~~-a~~~p--~~~a~~~~--~~~lTy~el~~~~~~la~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 108 (516)
T PRK13383 35 TNPYTLLAVT-AARWP--GRTAIIDD--DGALSYRELQRATESLARRLTR-DGVAPGRAVGVMCRNGRGFVTAVFAVGLL 108 (516)
T ss_pred CcHHHHHHHH-HHHCC--CCcEEEeC--CCcEeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 6788887666 56666 79999874 5689999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQ 207 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (526)
|++++|+++.++.+++.+++++++++++++++.....+......++.++... . .. . ..... +...
T Consensus 109 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-------~-~~-~---~~~~~---p~~~ 173 (516)
T PRK13383 109 GADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPAT-------A-GA-E---ESGGR---PAVA 173 (516)
T ss_pred CeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccch-------h-hh-h---cCCCC---CCCC
Confidence 9999999999999999999999999999999877665544322333332110 0 00 0 00011 1223
Q ss_pred CCEEEEEcCCCCCCCchHHHhhhHHHHHHHH--HHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC
Q 041055 208 DDTAAILYSSGTTGTSKGVILTHANFISIMQ--LLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR 285 (526)
Q Consensus 208 ~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~--~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~ 285 (526)
++.++++|||||||.||+|.++|........ .....+ ...++++++..+|++|.+|+ ..++.++..|+++++...
T Consensus 174 ~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~ 250 (516)
T PRK13383 174 APGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT--RLRTGSRISVAMPMFHGLGL-GMLMLTIALGGTVLTHRH 250 (516)
T ss_pred CCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh--ccCCCCeEEEecCCcchhhH-HHHHHHHhcCCEEEECCC
Confidence 5567899999999999999999974322111 111222 36788999999999999999 566778889999999888
Q ss_pred CCHHHHHHHHHhcCccEeecccHHHHHHHhhcc---CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccc
Q 041055 286 FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK---DSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTES 362 (526)
Q Consensus 286 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~ 362 (526)
++++.+++.++++++|.+.++|+++..+.+... ....++++|.+++||+++++++.++|.+.+ +..+++.||+||+
T Consensus 251 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~ 329 (516)
T PRK13383 251 FDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEV 329 (516)
T ss_pred CCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhccccccc
Confidence 999999999999999999999999999987522 234578999999999999999999999999 6789999999999
Q ss_pred cceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccc
Q 041055 363 CGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGD 442 (526)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD 442 (526)
+..+..... .. ....+++|+|+|+++++|+| ++++++++|+.|||+++|+.++.||++++.. .+ .+|||+|||
T Consensus 330 ~~~~~~~~~-~~-~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGD 402 (516)
T PRK13383 330 GIGALATPA-DL-RDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGD 402 (516)
T ss_pred ccceecccc-cc-ccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchh---he-ecCceecce
Confidence 865544322 11 22368899999999999999 5678999999999999999999999987642 22 579999999
Q ss_pred eEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHH
Q 041055 443 LCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFV 522 (526)
Q Consensus 443 ~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l 522 (526)
+|++|++|++++.||.||+||++|++|+|.+||++|.++|.|.+++|+++++...++.+.++|++.++...+.+++++++
T Consensus 403 l~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~ 482 (516)
T PRK13383 403 MGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYL 482 (516)
T ss_pred eEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998889999999999887777788999999
Q ss_pred HhcC
Q 041055 523 TSQL 526 (526)
Q Consensus 523 ~~~l 526 (526)
++++
T Consensus 483 ~~~l 486 (516)
T PRK13383 483 KDRV 486 (516)
T ss_pred HHhc
Confidence 8875
No 74
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-61 Score=508.89 Aligned_cols=465 Identities=31% Similarity=0.466 Sum_probs=379.8
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcC
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLG 128 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G 128 (526)
++.+.+... +...| +++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|
T Consensus 25 ~~~~~~~~~-a~~~p--~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 98 (563)
T PRK06710 25 PLHKYVEQM-ASRYP--EKKALHFL--GKDITFSVFHDKVKRFANYLQK-LGVEKGDRVAIMLPNCPQAVIGYYGTLLAG 98 (563)
T ss_pred cHHHHHHHH-HHHCC--CceEEEec--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 577777666 55566 79999884 6789999999999999999987 899999999999999999999999999999
Q ss_pred CEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC----CCCEEEEcCC-C--C--CC-----------------
Q 041055 129 AILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV----NVPIIVTSRD-Q--S--NN----------------- 182 (526)
Q Consensus 129 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~----~~~~i~~~~~-~--~--~~----------------- 182 (526)
++++|++|.++.+++.++++.++++++++++.....+... ....+.+... . . ..
T Consensus 99 ~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (563)
T PRK06710 99 GIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKV 178 (563)
T ss_pred eEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccccc
Confidence 9999999999999999999999999999987654333211 1111111100 0 0 00
Q ss_pred ---Cc-chHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhh-hhcccCCCCcEEEEe
Q 041055 183 ---KS-VSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRW-TVDVTHAQNDIFLCM 257 (526)
Q Consensus 183 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~-~~~~~~~~~~~~l~~ 257 (526)
.. ..+...... .. .........++++++++|||||||.||+|.++|+++......... .+.. ....+++++.
T Consensus 179 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~-~~~~~~~l~~ 255 (563)
T PRK06710 179 SESETIHLWNSVEKE-VN-TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNC-KEGEEVVLGV 255 (563)
T ss_pred cccchhhhhhhhhhc-cc-cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCC-CCCCceEEEe
Confidence 00 001111000 00 000111123578999999999999999999999998765433222 2221 2345688999
Q ss_pred CChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCC
Q 041055 258 IPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPL 336 (526)
Q Consensus 258 ~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l 336 (526)
+|++|.+|+...++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+++. ......++++|.+++||+++
T Consensus 256 ~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~ 335 (563)
T PRK06710 256 LPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPL 335 (563)
T ss_pred CchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcC
Confidence 99999999866677788899999999889999999999999999999999999999876 33345678999999999999
Q ss_pred CHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccc
Q 041055 337 SKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPT 416 (526)
Q Consensus 337 ~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~ 416 (526)
++++.+++.+.+ ++.+++.||+||++.......... ...++++|++.+++.++++|++++.+++.|+.|||+++|+.
T Consensus 336 ~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~ 412 (563)
T PRK06710 336 PVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLWE--KRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQ 412 (563)
T ss_pred CHHHHHHHHHhh-CCCEecccccccCccccccCcccc--cccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCc
Confidence 999999999988 789999999999987544322111 12267899999999999999888999999999999999999
Q ss_pred cccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCC
Q 041055 417 IMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEE 496 (526)
Q Consensus 417 ~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~ 496 (526)
++.||+++++.+...| .+|||+|||+++++++|.++++||.||+||++|.+|+|.+||++|.++|.|.+++|++++++.
T Consensus 413 ~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~ 491 (563)
T PRK06710 413 IMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPY 491 (563)
T ss_pred cchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCC
Confidence 9999999999999888 589999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 497 AGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 497 ~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
.|+.++++|+..++...+.++++++++++|
T Consensus 492 ~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l 521 (563)
T PRK06710 492 RGETVKAFVVLKEGTECSEEELNQFARKYL 521 (563)
T ss_pred cCceeEEEEEECCCCCCCHHHHHHHHHHhc
Confidence 899999999999887788899999998764
No 75
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.3e-61 Score=508.67 Aligned_cols=486 Identities=26% Similarity=0.415 Sum_probs=383.6
Q ss_pred eecCCCCCCCCCCCCCCCCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Q 041055 30 YHSLIQLGENYRIPTRTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFV 109 (526)
Q Consensus 30 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i 109 (526)
|..++..+....++.....++.+.+... ++..+ +++|+++ .++.+||+||.+++.++|+.|.+++|+++||+|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~--~~~a~~~--~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i 81 (560)
T PRK08751 7 WLQSYPAGVAAEIDLEQFRTVAEVFATS-VAKFA--DRPAYHS--FGKTITYREADQLVEQFAAYLLGELQLKKGDRVAL 81 (560)
T ss_pred hhhhcCCCCCCccCCcCCCcHHHHHHHH-HHhCC--CCceEEE--CCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 4433332233334432224677777666 55556 7999997 36899999999999999999964489999999999
Q ss_pred ECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc----CCCCEEEEcC-CC-----
Q 041055 110 LAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK----VNVPIIVTSR-DQ----- 179 (526)
Q Consensus 110 ~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~i~~~~-~~----- 179 (526)
+++|+++++++++||+++|++++|++|.++.+++.+++++++++++++++.....+.. .....++... ..
T Consensus 82 ~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (560)
T PRK08751 82 MMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFP 161 (560)
T ss_pred ECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccc
Confidence 9999999999999999999999999999999999999999999999998765543321 1222222111 00
Q ss_pred -------------------CCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHH
Q 041055 180 -------------------SNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLL 240 (526)
Q Consensus 180 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~ 240 (526)
.......+.+....... ...+.....++++++++|||||||.||+|.++|.++...+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 240 (560)
T PRK08751 162 KAALVNFVVKYVKKLVPEYRINGAIRFREALALGRK-HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA 240 (560)
T ss_pred cchhhhhhhhhhhccccccCCCccccHHHHHhccCC-CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHH
Confidence 00011122222211111 1111224467899999999999999999999999998776655
Q ss_pred hhhhccc--CCC-CcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh
Q 041055 241 RWTVDVT--HAQ-NDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY 316 (526)
Q Consensus 241 ~~~~~~~--~~~-~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 316 (526)
...+... ..+ .+++++.+|++|.+++....+.++..|++.++. ..+++..+++.++++++|++..+|.++..+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 320 (560)
T PRK08751 241 HQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNT 320 (560)
T ss_pred HHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcC
Confidence 4443210 223 357788899999999865555666666665554 467899999999999999999999999999886
Q ss_pred -ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEe
Q 041055 317 -CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVD 395 (526)
Q Consensus 317 -~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd 395 (526)
.....+++++|.+++||+++++++.+.|++.+ ++.+++.||+||++..++.+.... ....+++|.|.+++.++++|
T Consensus 321 ~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d 397 (560)
T PRK08751 321 PGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTL--KEYNGSIGLPIPSTDACIKD 397 (560)
T ss_pred cCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccc--cccCCCcCccCCCceEEEEC
Confidence 33445678999999999999999999999988 789999999999987665443211 12267899999999999999
Q ss_pred CCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHH
Q 041055 396 TETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELE 475 (526)
Q Consensus 396 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE 475 (526)
+++.+++.|+.|||+++|+.+++||+++++.+.+.|+.+|||+|||+|+++++|.+++.||.+|+||++|++|+|.+||
T Consensus 398 -~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE 476 (560)
T PRK08751 398 -DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIE 476 (560)
T ss_pred -CCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHH
Confidence 6778999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 476 AVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 476 ~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
++|.++|+|.+++|+++++...|+.++++++.. +...+.++++++++++|
T Consensus 477 ~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~-~~~~~~~~l~~~~~~~l 526 (560)
T PRK08751 477 DVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKK-DPALTAEDVKAHARANL 526 (560)
T ss_pred HHHHhCcCeeeeEEEecCCCCCCceEEEEEEcC-CCCCCHHHHHHHHHHhh
Confidence 999999999999999999988888888888754 44567788999988764
No 76
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-61 Score=505.86 Aligned_cols=465 Identities=32% Similarity=0.503 Sum_probs=395.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|+.+. ++.+||+||.+++.++|+.|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 6 ~~l~~~l~~~-~~~~p--~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~g~~~~~~V~l~~~~~~~~~~~~la~~~~ 79 (521)
T PRK06187 6 LTIGRILRHG-ARKHP--DKEAVYFD--GRRTTYAELDERVNRLANALRA-LGVKKGDRVAVFDWNSHEYLEAYFAVPKI 79 (521)
T ss_pred CCHHHHHHHH-HHHCC--CceEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 5788888777 66677 78999884 5679999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCC---CCCcchHHHHhhhcCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQS---NNKSVSVEELIECCDAAD 198 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~---~~~~~~~~~~~~~~~~~~ 198 (526)
|++++|+++.++.+++..+++.+++++++++.+....+... ..+ +++++.... ......+.+.......
T Consensus 80 G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (521)
T PRK06187 80 GAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASD-- 157 (521)
T ss_pred CeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCc--
Confidence 99999999999999999999999999999998766554421 122 333332221 1223344444332221
Q ss_pred CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCc
Q 041055 199 ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGV 278 (526)
Q Consensus 199 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~ 278 (526)
..+.....++++++++|||||||.||+|.++|+++..........++ ..+++++++.+|++|.+++...+ .++..|+
T Consensus 158 ~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~-~~l~~G~ 234 (521)
T PRK06187 158 TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLK--LSRDDVYLVIVPMFHVHAWGLPY-LALMAGA 234 (521)
T ss_pred cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhC--CCCCCEEEEeCCchHHhhHHHHH-HHHHhCC
Confidence 11122456788999999999999999999999999987777666555 67899999999999999984444 4899999
Q ss_pred EEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 279 TIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 279 ~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
++++.+.+++..+++.++++++|.++++|+++..|.+.. .....++++|.+++||+++++++.+.+.+.+ ++++++.|
T Consensus 235 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 313 (521)
T PRK06187 235 KQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGY 313 (521)
T ss_pred EEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchheee
Confidence 999998889999999999999999999999999999873 3367788999999999999999999999999 89999999
Q ss_pred ccccccceeecccCcccc---cCCCCcccccCCCcEEEEEeCCCCccCCC--CCcceEEEeccccccccCCCHHHHhccc
Q 041055 358 GLTESCGATTFMVSPKQA---RARSGSCGALSPTFYAKVVDTETRLALPP--YQRGELWLKSPTIMRGYFGNEEATAAAF 432 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~~~---~~~~~~~G~~~~~~~~~ivd~~~~~~~~~--g~~Gel~v~~~~~~~gy~~~~~~t~~~~ 432 (526)
|+||++.++......... ....+++|+|++++.++|+|+ ++.+++. |+.|||+++|+.++.||+++++.+.+.|
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~ 392 (521)
T PRK06187 314 GMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDD-DGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI 392 (521)
T ss_pred ccCccCcccccCCcccccccccccCCccccccCCeEEEEECC-CCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh
Confidence 999998766654332221 113689999999999999995 5678888 9999999999999999999999999988
Q ss_pred CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC
Q 041055 433 DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ 512 (526)
Q Consensus 433 ~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~ 512 (526)
.++||+|||+++++++|.+++.||.+|++|++|.+++|.+||++|.++++|.+++|++.+++..++.++++++++++..
T Consensus 393 -~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 471 (521)
T PRK06187 393 -DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGAT 471 (521)
T ss_pred -hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCCC
Confidence 4679999999999999999999999999999999999999999999999999999999998888999999999998877
Q ss_pred CCHHHHHHHHHhcC
Q 041055 513 LTEDQVMQFVTSQL 526 (526)
Q Consensus 513 ~~~~~l~~~l~~~l 526 (526)
.++++++++++++|
T Consensus 472 ~~~~~l~~~l~~~l 485 (521)
T PRK06187 472 LDAKELRAFLRGRL 485 (521)
T ss_pred CCHHHHHHHHHHhc
Confidence 88889999998764
No 77
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2e-62 Score=563.86 Aligned_cols=452 Identities=18% Similarity=0.234 Sum_probs=366.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC-------CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS-------ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSI 120 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~-------~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~ 120 (526)
-++++.+..+ ++..| +++|+++. ..++++||+||.+++.++|++|.+ .|+++|++|+++++|+++++++
T Consensus 236 ~~l~~~~~~~-a~~~p--d~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~~~~~i~~ 311 (1389)
T TIGR03443 236 GAIHDIFADN-AEKHP--DRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK-TGIKRGDVVMIYAYRGVDLVVA 311 (1389)
T ss_pred CcHHHHHHHH-HHhCC--CCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEecCCHHHHHH
Confidence 3577777766 66677 79999863 235789999999999999999998 9999999999999999999999
Q ss_pred HHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhH---HHhhc---------CCCCEEEEcCCCCC-CCcchH
Q 041055 121 CLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEEL---QKLTK---------VNVPIIVTSRDQSN-NKSVSV 187 (526)
Q Consensus 121 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---~~~~~---------~~~~~i~~~~~~~~-~~~~~~ 187 (526)
+|||+++|++++|++|.++.+++.+++++++++++++..... ..+.. ...+.+.+...... ......
T Consensus 312 ~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (1389)
T TIGR03443 312 VMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLEG 391 (1389)
T ss_pred HHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccccccccc
Confidence 999999999999999999999999999999999999875421 11100 01222222111000 000000
Q ss_pred H--HHhhhcCC-CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHH
Q 041055 188 E--ELIECCDA-ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIY 264 (526)
Q Consensus 188 ~--~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~ 264 (526)
. +....... ..........++++++|+|||||||.||||+++|+++.+.+......++ +.++|+++...|++|..
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~--~~~~d~~~~~~~~~~d~ 469 (1389)
T TIGR03443 392 GETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFG--LSENDKFTMLSGIAHDP 469 (1389)
T ss_pred ccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC--CCCCCEEEEecCceecc
Confidence 0 00000000 0001111346789999999999999999999999999998887777666 67899999999999988
Q ss_pred HHHHHHHhhcccCcEEEEecC---CCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHH
Q 041055 265 GLAFFATGLFCCGVTIVVMQR---FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELA 341 (526)
Q Consensus 265 g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~ 341 (526)
++ ..++.+++.|+++++.+. .++..+++.|+++++|+++++|+++..|.... ...++++|.+++||+++++...
T Consensus 470 ~~-~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~--~~~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 470 IQ-RDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA--TTPIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred hH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc--cccCCCccEEEEecccCCHHHH
Confidence 77 678899999999998864 36889999999999999999999999887542 3457899999999999999999
Q ss_pred HHHHHhCCCCceeeccccccccceeecccCcccc--------cCCCCcccccCCCcEEEEEeCCC-CccCCCCCcceEEE
Q 041055 342 DEFRAKFPWVELRQGYGLTESCGATTFMVSPKQA--------RARSGSCGALSPTFYAKVVDTET-RLALPPYQRGELWL 412 (526)
Q Consensus 342 ~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~ivd~~~-~~~~~~g~~Gel~v 412 (526)
+++.+.++++++++.||+||++..++........ .....++|+|+++++++|+|+++ +++++.|+.|||+|
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i 626 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYV 626 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEe
Confidence 9999988889999999999998766543221110 01246799999999999999643 57899999999999
Q ss_pred eccccccccCCCHHHHhcccC----------------------------CCCeeeccceEEEcCCCcEEEEccccceEEe
Q 041055 413 KSPTIMRGYFGNEEATAAAFD----------------------------EDGWLKTGDLCYFDGEGFLYIVDRIKELIKH 464 (526)
Q Consensus 413 ~~~~~~~gy~~~~~~t~~~~~----------------------------~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~ 464 (526)
+||++++||+++|+.|.++|. .++||+|||+|++++||.|+|+||.||+||+
T Consensus 627 ~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki 706 (1389)
T TIGR03443 627 RAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI 706 (1389)
T ss_pred cccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe
Confidence 999999999999999999883 2579999999999999999999999999999
Q ss_pred cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeC
Q 041055 465 NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 465 ~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~ 508 (526)
+|++|+|.|||.+|.+||.|.+++|++.++...++.++|||++.
T Consensus 707 ~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~ 750 (1389)
T TIGR03443 707 RGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQ 750 (1389)
T ss_pred CcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEecc
Confidence 99999999999999999999999999998888889999999976
No 78
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=3.6e-61 Score=503.06 Aligned_cols=467 Identities=28% Similarity=0.462 Sum_probs=379.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
-++.+.+... ++..| +++|+++. ++.+||.||.++++++|.+|.+ +|+++||+|+++++|+++++++++||+++
T Consensus 21 ~~~~~~~~~~-~~~~p--~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 94 (541)
T TIGR03205 21 GTLPDLLSKA-AADYG--PRPALEFR--DRPITYTELEAMAETAAAALLR-AGYGKDASVALYLGNTPDHPINFFGALKA 94 (541)
T ss_pred CCHHHHHHHH-HHHcC--CCceEEEC--CcEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 3677877666 55566 78999873 6799999999999999999988 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh--HHHhh---cC-CCC-EEEEcCCC------------CCCCcchHH
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEE--LQKLT---KV-NVP-IIVTSRDQ------------SNNKSVSVE 188 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~---~~-~~~-~i~~~~~~------------~~~~~~~~~ 188 (526)
|++++|++|..+.+++.++++.++++++++++.. ...+. .. ... +++..... ......++.
T Consensus 95 G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (541)
T TIGR03205 95 GARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYA 174 (541)
T ss_pred CeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHH
Confidence 9999999999999999999999999999987531 11111 11 111 22222210 011122333
Q ss_pred HHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhh---hcccCCCCcEEEEeCChhHHHH
Q 041055 189 ELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWT---VDVTHAQNDIFLCMIPMFHIYG 265 (526)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~---~~~~~~~~~~~l~~~p~~~~~g 265 (526)
++.+.... ........++++++++|||||||.||+|.++|+++.......... ........+++++.+|++|.++
T Consensus 175 ~~~~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 252 (541)
T TIGR03205 175 DFVKGAAA--PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYA 252 (541)
T ss_pred HHHhcCCC--CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHH
Confidence 33322111 111114467899999999999999999999999987654322111 0111234578999999999999
Q ss_pred HHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHH
Q 041055 266 LAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEF 344 (526)
Q Consensus 266 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~ 344 (526)
+...++.++..|+++++...+++..+++.|+++++|++.++|+++..+++. ......++++|.+++||+++++++.+++
T Consensus 253 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 253 LTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 877788889999999988889999999999999999999999999998875 2234567899999999999999999999
Q ss_pred HHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEe-CCCCccCCCCCcceEEEeccccccccCC
Q 041055 345 RAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVD-TETRLALPPYQRGELWLKSPTIMRGYFG 423 (526)
Q Consensus 345 ~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd-~~~~~~~~~g~~Gel~v~~~~~~~gy~~ 423 (526)
.+.+ +.++++.||+||++..++....... ..++++|.+++++.+++++ .+++++++.|+.|||+++|++++.||++
T Consensus 333 ~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~--~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~ 409 (541)
T TIGR03205 333 ERKT-GLKLKSGWGMTETCSPGTGHPPEGP--DKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWN 409 (541)
T ss_pred HHHh-CCCeecccccccCCcccccCCCCCC--CCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccC
Confidence 8887 6899999999999876655432211 1267899999999998865 3567889999999999999999999999
Q ss_pred CHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEE
Q 041055 424 NEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMA 503 (526)
Q Consensus 424 ~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a 503 (526)
+++.+++.| .++||+|||+++++++|++++.||.||+||++|++|+|.+||+++.+++.|.+++|++++++..++.+++
T Consensus 410 ~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 488 (541)
T TIGR03205 410 RPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKA 488 (541)
T ss_pred ChhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEE
Confidence 999999988 4789999999999999999999999999999999999999999999999999999999999888899999
Q ss_pred EEEeCCCCC-CCHHHHHHHHHhcC
Q 041055 504 YVVRAAGSQ-LTEDQVMQFVTSQL 526 (526)
Q Consensus 504 ~vv~~~~~~-~~~~~l~~~l~~~l 526 (526)
++++.++.. .+.++++++++++|
T Consensus 489 ~v~~~~~~~~~~~~~l~~~~~~~l 512 (541)
T TIGR03205 489 FVKLRPGAKPFSLDELRAFLAGKL 512 (541)
T ss_pred EEEECCCCCcCCHHHHHHHHHhhc
Confidence 999887643 57788999998875
No 79
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-61 Score=505.71 Aligned_cols=464 Identities=23% Similarity=0.334 Sum_probs=373.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC--CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS--ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIF 125 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~ 125 (526)
.++.+.+.+. ++..+ +++++.+. ++.+.+||.||.++++++|++|.+ +|+++||+|+++++|+++++++++||+
T Consensus 10 ~~~~~~l~~~-~~~~~--~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~~d~v~i~~~~~~~~~~~~la~~ 85 (539)
T PRK07008 10 LLISSLIAHA-ARHAG--DTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-LGVEPGDRVGTLAWNGYRHLEAYYGVS 85 (539)
T ss_pred CCHHHHHHHH-HhhCC--CceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 3566666655 55555 57777653 223689999999999999999998 999999999999999999999999999
Q ss_pred HcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc-----CCCCE-EEEcCCC----CCCCcchHHHHhhhcC
Q 041055 126 SLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK-----VNVPI-IVTSRDQ----SNNKSVSVEELIECCD 195 (526)
Q Consensus 126 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-----~~~~~-i~~~~~~----~~~~~~~~~~~~~~~~ 195 (526)
++|++++|++|.++.+++.++++.+++++++++.+..+.+.. ..... +...... .......+.++.....
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (539)
T PRK07008 86 GSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQD 165 (539)
T ss_pred hcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhcccC
Confidence 999999999999999999999999999999998766544331 11222 2222111 0112334444332211
Q ss_pred CCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHH--HhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhh
Q 041055 196 AADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQL--LRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGL 273 (526)
Q Consensus 196 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~--~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~ 273 (526)
. ........++++++++|||||||.||+|++||++++..... ....++ ..++|+++...|++|.+++ ...+.+
T Consensus 166 ~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~~~-~~~~~~ 240 (539)
T PRK07008 166 G--DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMG--LSARDAVLPVVPMFHVNAW-GLPYSA 240 (539)
T ss_pred C--CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccC--CCCCceEEecCchHHhhhH-HHHHHH
Confidence 1 11111456788999999999999999999999998754322 222333 6788999999999998887 445677
Q ss_pred cccCcEEEEe-cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCC
Q 041055 274 FCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWV 351 (526)
Q Consensus 274 l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~ 351 (526)
+..|+++++. +.++++.+++.++++++|++.++|+++..+++. ......++++|.++++|+++++++.+++.+.+ ++
T Consensus 241 l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~ 319 (539)
T PRK07008 241 PLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GV 319 (539)
T ss_pred HhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CC
Confidence 8899999887 467999999999999999999999999999887 33456788999999999999999999999998 78
Q ss_pred ceeeccccccccceeecccCccc--------ccCCCCcccccCCCcEEEEEeCCCCccCCCC--CcceEEEecccccccc
Q 041055 352 ELRQGYGLTESCGATTFMVSPKQ--------ARARSGSCGALSPTFYAKVVDTETRLALPPY--QRGELWLKSPTIMRGY 421 (526)
Q Consensus 352 ~l~~~yG~tE~~~~~~~~~~~~~--------~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g--~~Gel~v~~~~~~~gy 421 (526)
.+++.||+||++..++.+..... ......++|+|+|+++++|+|+ ++.+++.+ +.|||+++|+.++.||
T Consensus 320 ~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy 398 (539)
T PRK07008 320 EVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGD-DGRELPWDGKAFGDLQVRGPWVIDRY 398 (539)
T ss_pred ceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECC-CCCccCCCCCcceEEEEeCCccchhh
Confidence 99999999999875544321110 0011467899999999999994 66777754 5799999999999999
Q ss_pred CCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceE
Q 041055 422 FGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIP 501 (526)
Q Consensus 422 ~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~ 501 (526)
++++. ..+ .+|||+|||++++++||++++.||.||+||.+|++|+|.|||+++.++|.|.+++|++.++...++.+
T Consensus 399 ~~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~ 474 (539)
T PRK07008 399 FRGDA---SPL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERP 474 (539)
T ss_pred cCChh---hhh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccce
Confidence 99984 334 36899999999999999999999999999999999999999999999999999999999998888999
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 502 MAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 502 ~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+++|+..++...+.++++++++++|
T Consensus 475 ~~~v~~~~~~~~~~~~l~~~~~~~l 499 (539)
T PRK07008 475 LLVVVKRPGAEVTREELLAFYEGKV 499 (539)
T ss_pred EEEEEeCCCCccCHHHHHHHHHhhc
Confidence 9999988887788899999998875
No 80
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.2e-62 Score=499.19 Aligned_cols=423 Identities=27% Similarity=0.370 Sum_probs=361.7
Q ss_pred CCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHH
Q 041055 65 ESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIV 144 (526)
Q Consensus 65 ~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 144 (526)
.+++|+++ +++++||+||.++++++|..|. ++|+|+++++|+++|+++++||+++|++++|+++..+.+++.
T Consensus 14 ~~~~a~~~--~~~~~Ty~el~~~~~~~a~~L~------~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 14 DIADAVRI--GGRVLSRSDLAGAATAVAERVA------GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred CCceEEEe--CCcEEEHHHHHHHHHHHHHHhc------cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 37999988 4789999999999999999985 369999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCch
Q 041055 145 KQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSK 224 (526)
Q Consensus 145 ~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK 224 (526)
++++++++++++++.+... ...+.+..... .. .+ . ......++++++++|||||||.||
T Consensus 86 ~~l~~~~~~~il~~~~~~~----~~~~~~~~~~~--~~---~~----------~--~~~~~~~~~~a~i~~TSGTTG~PK 144 (471)
T PRK07787 86 HILADSGAQAWLGPAPDDP----AGLPHVPVRLH--AR---SW----------H--RYPEPDPDAPALIVYTSGTTGPPK 144 (471)
T ss_pred HHHHhcCCCEEEecCCccc----ccccceeeecc--cc---cc----------c--cCCCCCCCceEEEEECCCCCCCCC
Confidence 9999999999999764110 11111111100 00 00 0 011245689999999999999999
Q ss_pred HHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEee
Q 041055 225 GVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 225 ~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~ 304 (526)
+|.++|+++...+......+. ..++++++..+|++|.+|+...++.++..|+++++...+++..+++.++ +++|++.
T Consensus 145 ~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~ 221 (471)
T PRK07787 145 GVVLSRRAIAADLDALAEAWQ--WTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYF 221 (471)
T ss_pred EEEEeHHHHHHHHHHHHHhcC--CCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEE
Confidence 999999999988777666665 6788999999999999999788899999999999998899999999999 9999999
Q ss_pred cccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccc
Q 041055 305 LVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGA 384 (526)
Q Consensus 305 ~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~ 384 (526)
++|+++..+++.......++++|.+++||+++++++.++|.+.+ +.++++.||+||++..+..... . ...++++|+
T Consensus 222 ~~P~~~~~l~~~~~~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~--~~~~~~vG~ 297 (471)
T PRK07787 222 GVPTVWSRIAADPEAARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTRAD-G--ERRPGWVGL 297 (471)
T ss_pred cchHHHHHHHhCccccccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecCCC-C--cccCCcccc
Confidence 99999999987643445678999999999999999999999988 6899999999999865443221 1 222678999
Q ss_pred cCCCcEEEEEeCCCCccCC-CCC-cceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccc-cce
Q 041055 385 LSPTFYAKVVDTETRLALP-PYQ-RGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRI-KEL 461 (526)
Q Consensus 385 ~~~~~~~~ivd~~~~~~~~-~g~-~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~-~d~ 461 (526)
|.+++.++|+|++ +.+++ .|+ .|||+++|++++.||+++++.+.+.|..+|||+|||+|++++||.+++.||. |++
T Consensus 298 ~~~g~~~~i~d~~-~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~ 376 (471)
T PRK07787 298 PLAGVETRLVDED-GGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDL 376 (471)
T ss_pred cCCCcEEEEECCC-CCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCcee
Confidence 9999999999954 67776 444 7999999999999999999999999988999999999999999999999996 899
Q ss_pred EEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 462 IKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 462 ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+|.+|++|+|.+||++|.++|.|.+++|++.++...++.++++|++. ...++++++++++++|
T Consensus 377 i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~--~~~~~~~l~~~l~~~l 439 (471)
T PRK07787 377 IKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGA--DDVAADELIDFVAQQL 439 (471)
T ss_pred EeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeC--CCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999999999988899999999973 3467788999998865
No 81
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.5e-63 Score=523.22 Aligned_cols=438 Identities=24% Similarity=0.291 Sum_probs=344.4
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCC----CceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSAT----HERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLA 123 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~----~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA 123 (526)
.++.+.+... ++..| +++|+++.+. .+.+||+||.++++++|++|.+ +|+++||+|+++++|+++|++++||
T Consensus 49 ~~l~~~l~~~-a~~~p--d~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~~~~lA 124 (624)
T PRK12582 49 RSIPHLLAKW-AAEAP--DRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD-LGLDPGRPVMILSGNSIEHALMTLA 124 (624)
T ss_pred cCHHHHHHHH-HHHCC--CchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHH
Confidence 5788887776 66666 7899886421 2689999999999999999988 9999999999999999999999999
Q ss_pred HHHcCCEEccCCCCCCH-----HHHHHHHHhcCCeEEEEcchh-HH----HhhcCCCCEEEEcCCCCCCCcchHHHHhhh
Q 041055 124 IFSLGAILSPANSINTE-----SEIVKQVRDSGAKLIISASEE-LQ----KLTKVNVPIIVTSRDQSNNKSVSVEELIEC 193 (526)
Q Consensus 124 ~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~-~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 193 (526)
|+++|++++|++|.++. +++.+++++++++++|++... .. .+......++.++..........+.++...
T Consensus 125 ~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 204 (624)
T PRK12582 125 AMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAFADLAAT 204 (624)
T ss_pred HHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccHHHHhhc
Confidence 99999999999999875 899999999999999998642 11 111223344544432212223344443322
Q ss_pred cCCCC-CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCC-CCcEEEEeCChhHHHHHHHHHH
Q 041055 194 CDAAD-ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHA-QNDIFLCMIPMFHIYGLAFFAT 271 (526)
Q Consensus 194 ~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~-~~~~~l~~~p~~~~~g~~~~~~ 271 (526)
..... ........++++++|+|||||||.||||++||+++................ ..++++..+|++|.+|+...++
T Consensus 205 ~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~ 284 (624)
T PRK12582 205 PPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANFN 284 (624)
T ss_pred CCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHHH
Confidence 11100 001113457899999999999999999999999998876655444332111 2579999999999999867777
Q ss_pred hhcccCcEEEEecC-CCH---HHHHHHHHhcCccEeecccHHHHHHHhhcc-----CCCCCCCceEEEEecCCCCHHHHH
Q 041055 272 GLFCCGVTIVVMQR-FDL---QAMIEAIKTYQVNNIPLVPPVILGLVKYCK-----DSSYLTSLRRVGSGAAPLSKELAD 342 (526)
Q Consensus 272 ~~l~~G~~~v~~~~-~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~~~~l~~lr~v~~gG~~l~~~~~~ 342 (526)
.++..|+++++.+. +++ ..+++.++++++|+++++|+++..|++... ....+++||.+++||+++++++.+
T Consensus 285 ~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~~ 364 (624)
T PRK12582 285 GLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLYE 364 (624)
T ss_pred HHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHHH
Confidence 88899999998753 333 456778899999999999999998876521 123478999999999999999999
Q ss_pred HHHHhC----C-CCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecccc
Q 041055 343 EFRAKF----P-WVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTI 417 (526)
Q Consensus 343 ~~~~~~----~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~ 417 (526)
+|.+.+ + ++++++.||+||++.++...... ....+++|+|+||++++++ +.|+.|||+|+|+++
T Consensus 365 ~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~---~~~~~svG~p~pg~~v~i~--------~~G~~GEl~vrg~~v 433 (624)
T PRK12582 365 RMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD---TERVGLIGLPLPGVELKLA--------PVGDKYEVRVKGPNV 433 (624)
T ss_pred HHHHHHHhhcCCCceEEeccccccccceeecccCC---CCCCCCCCcCCCCcEEEEc--------cCCCceEEEEECCcc
Confidence 999863 2 36899999999998765532211 1237899999999999986 356789999999999
Q ss_pred ccccCCCHHHHhcccCCCCeeeccceEEE-c---CCCcEEEEccccceEEe-cCeeeChHHHH--HHHhcCCCcccEEEE
Q 041055 418 MRGYFGNEEATAAAFDEDGWLKTGDLCYF-D---GEGFLYIVDRIKELIKH-NGYQVAPAELE--AVLLSHPNILDAAVI 490 (526)
Q Consensus 418 ~~gy~~~~~~t~~~~~~~~~~~TGD~~~~-~---~~G~l~~~GR~~d~ik~-~G~~v~~~eIE--~~l~~~~~v~~~~vv 490 (526)
+.|||++|+.|.+.|+.+|||+|||+|++ | ++|+++|+||.||+||. +|++|+|.+|| .++.+||.|.+|+|+
T Consensus 434 ~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~Vv 513 (624)
T PRK12582 434 TPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVA 513 (624)
T ss_pred cccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEE
Confidence 99999999999999988999999999998 4 46999999999999995 79999998885 688999999999999
Q ss_pred eeeCCCCCce
Q 041055 491 PLEDEEAGQI 500 (526)
Q Consensus 491 ~~~~~~~~~~ 500 (526)
|++++..|+.
T Consensus 514 G~~~~~~g~l 523 (624)
T PRK12582 514 GQDRAFIGLL 523 (624)
T ss_pred cCCCCcEEEE
Confidence 9987654443
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=5e-62 Score=553.49 Aligned_cols=465 Identities=26% Similarity=0.369 Sum_probs=383.9
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+.+. ++++| +++|+++. .++++||+||.++++++|++|.+ ++++||+|+++++|+++++++++||+++
T Consensus 615 ~~l~~~~~~~-a~~~p--~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~~~~la~~~~ 688 (1146)
T PRK08633 615 PPLAEAWIDT-AKRNW--SRLAVADS-TGGELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGALANLALLLA 688 (1146)
T ss_pred CCHHHHHHHH-HHhcC--CCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHHHHHHHHHHc
Confidence 3456666555 55566 79999874 46799999999999999999976 4899999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC--------CCCEEEEcCCCC-CCCcchHHHHhhhcC-CC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV--------NVPIIVTSRDQS-NNKSVSVEELIECCD-AA 197 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--------~~~~i~~~~~~~-~~~~~~~~~~~~~~~-~~ 197 (526)
|++++|++|..+.+++.++++++++++++++++..+.+... ..+++..++... ......+.+...... +.
T Consensus 689 G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (1146)
T PRK08633 689 GKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLLPA 768 (1146)
T ss_pred CCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccCCH
Confidence 99999999999999999999999999999998776665421 112333322111 011111221111100 00
Q ss_pred ---CCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhc
Q 041055 198 ---DELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLF 274 (526)
Q Consensus 198 ---~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l 274 (526)
.........++++++++|||||||.||+|.++|+++..........++ ..++|++++.+|++|.+|+...++.++
T Consensus 769 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~~l 846 (1146)
T PRK08633 769 RLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFN--LRNDDVILSSLPFFHSFGLTVTLWLPL 846 (1146)
T ss_pred HHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcC--CCCCCEEEEcCcHHHHHhHHHHHHHHH
Confidence 000012456789999999999999999999999999988877766665 678999999999999999976688899
Q ss_pred ccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCc
Q 041055 275 CCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVE 352 (526)
Q Consensus 275 ~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~ 352 (526)
..|+++++.+ .++++.+++.++++++|++.++|++++.+.+. .....+++++|.+++||+++++++.+++++.+ +++
T Consensus 847 ~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~ 925 (1146)
T PRK08633 847 LEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIR 925 (1146)
T ss_pred HCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCC
Confidence 9999998876 57899999999999999999999999999876 34456789999999999999999999999998 789
Q ss_pred eeeccccccccceeecccCccc-------ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCH
Q 041055 353 LRQGYGLTESCGATTFMVSPKQ-------ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNE 425 (526)
Q Consensus 353 l~~~yG~tE~~~~~~~~~~~~~-------~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~ 425 (526)
+++.||+||++.+++....... ....++++|+|.||++++|+|+++++++++|+.|||+++|++++.||++++
T Consensus 926 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~ 1005 (1146)
T PRK08633 926 ILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGDP 1005 (1146)
T ss_pred eecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCCc
Confidence 9999999999876654332210 012367999999999999999888999999999999999999999999999
Q ss_pred HHHhcccCC---CCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCC--CcccEEEEeeeCCCCCce
Q 041055 426 EATAAAFDE---DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHP--NILDAAVIPLEDEEAGQI 500 (526)
Q Consensus 426 ~~t~~~~~~---~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~--~v~~~~vv~~~~~~~~~~ 500 (526)
+.|++.+.+ ++||+|||+|++|+||++++.||.||+||++|++|+|.|||++|.+|| .+.+++|++++++..|+.
T Consensus 1006 ~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~ 1085 (1146)
T PRK08633 1006 EKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEK 1085 (1146)
T ss_pred cchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcE
Confidence 999988843 389999999999999999999999999999999999999999999998 567899999999999999
Q ss_pred EEEEEEeCCCCCCCHHHHHHHHHh
Q 041055 501 PMAYVVRAAGSQLTEDQVMQFVTS 524 (526)
Q Consensus 501 ~~a~vv~~~~~~~~~~~l~~~l~~ 524 (526)
++++++.. ..+++++++++++
T Consensus 1086 ~~~~v~~~---~~~~~~l~~~~~~ 1106 (1146)
T PRK08633 1086 LVVLHTCG---AEDVEELKRAIKE 1106 (1146)
T ss_pred EEEEEecC---ccCHHHHHHHHHh
Confidence 99999862 3467788888875
No 83
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-61 Score=500.32 Aligned_cols=449 Identities=28% Similarity=0.373 Sum_probs=362.0
Q ss_pred CCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCC
Q 041055 59 PHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSIN 138 (526)
Q Consensus 59 ~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 138 (526)
++..| +++|+++.++++.+||+||.++++++|+.|.+ +|+++||+|+++++|++++++++|||+++|++++|+++.+
T Consensus 7 a~~~p--~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~ 83 (501)
T PRK13390 7 AQIAP--DRPAVIVAETGEQVSYRQLDDDSAALARVLYD-AGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHL 83 (501)
T ss_pred hhhCC--CCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCC
Confidence 34445 79999876567899999999999999999998 9999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCeEEEEcchhHHHhhcC--CCCE-EEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEc
Q 041055 139 TESEIVKQVRDSGAKLIISASEELQKLTKV--NVPI-IVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILY 215 (526)
Q Consensus 139 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 215 (526)
+.+++.++++++++++++++.......... .... +.+... ......+.+..... .+. ....++.++++|
T Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~-~~~~~~~a~i~~ 155 (501)
T PRK13390 84 TAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGE--IDGFGSFEAALAGA-----GPR-LTEQPCGAVMLY 155 (501)
T ss_pred CHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCc--ccccccHHHHhccc-----CCC-CCCCcccEEEEe
Confidence 999999999999999999986543322211 1111 112111 11122222221110 010 112235799999
Q ss_pred CCCCCCCchHHHh--hhHHHHHHHH----HHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHH
Q 041055 216 SSGTTGTSKGVIL--THANFISIMQ----LLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQ 289 (526)
Q Consensus 216 TSGTTG~PK~v~~--sh~~l~~~~~----~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~ 289 (526)
||||||.||+|++ +|.++..... .....+. ...++++++.+|++|.+++.. ....+..|+++++.+.+++.
T Consensus 156 TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~~~~~ 232 (501)
T PRK13390 156 SSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYD--ISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAKRFDAQ 232 (501)
T ss_pred CCCCCCCCCEEEeeccccccccchhhhHhhHHHHhC--CCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcCCcCHH
Confidence 9999999999995 5555543211 1122233 678899999999999998743 33456679999999889999
Q ss_pred HHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccccee
Q 041055 290 AMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGAT 366 (526)
Q Consensus 290 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~ 366 (526)
.+++.|+++++|++.++|+++..|++.. .....++++|.+++||+++++++.+.+.+.+ +..+++.||+||+++++
T Consensus 233 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 311 (501)
T PRK13390 233 ATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMT 311 (501)
T ss_pred HHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceE
Confidence 9999999999999999999999998752 2345678999999999999999999999988 67899999999998755
Q ss_pred ecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC--CCeeeccceE
Q 041055 367 TFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE--DGWLKTGDLC 444 (526)
Q Consensus 367 ~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~--~~~~~TGD~~ 444 (526)
.... .. .....+++|+|.++ .++|+| ++++++++|+.|||+|+|++++.||+++++.|.+.|.. ++|++|||+|
T Consensus 312 ~~~~-~~-~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~ 387 (501)
T PRK13390 312 FIDS-PD-WLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLG 387 (501)
T ss_pred Eecc-hh-hccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceE
Confidence 4322 11 12236799999999 799999 67889999999999999999999999999999988753 6899999999
Q ss_pred EEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCC---HHHHHHH
Q 041055 445 YFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLT---EDQVMQF 521 (526)
Q Consensus 445 ~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~---~~~l~~~ 521 (526)
++|+||.+++.||.|++||++|++|+|.|||++|.+||.|.+++|++++++..++.++++|++.++...+ .++++++
T Consensus 388 ~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~ 467 (501)
T PRK13390 388 SVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELARELIDY 467 (501)
T ss_pred EECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998899999999988765433 3578888
Q ss_pred HHhcC
Q 041055 522 VTSQL 526 (526)
Q Consensus 522 l~~~l 526 (526)
++++|
T Consensus 468 ~~~~l 472 (501)
T PRK13390 468 TRSRI 472 (501)
T ss_pred HHHhc
Confidence 88765
No 84
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-61 Score=509.78 Aligned_cols=465 Identities=22% Similarity=0.331 Sum_probs=370.9
Q ss_pred CCCCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 45 RTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
....++.+.+... ++.++ +++|+++. ++.+||+||.++++++|.+|.+ +|+++||+|+++++|+++++++++||
T Consensus 34 ~~~~tl~~~l~~~-a~~~p--~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~V~i~~~n~~~~v~~~lA~ 107 (600)
T PRK08279 34 DSKRSLGDVFEEA-AARHP--DRPALLFE--DQSISYAELNARANRYAHWAAA-RGVGKGDVVALLMENRPEYLAAWLGL 107 (600)
T ss_pred CCcccHHHHHHHH-HHhCC--CCcEEEeC--CCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3346888888877 66666 79999984 6899999999999999999998 99999999999999999999999999
Q ss_pred HHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCCEEEEcCCCCCCCcchHHHHhhhcCCC-C
Q 041055 125 FSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVPIIVTSRDQSNNKSVSVEELIECCDAA-D 198 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~ 198 (526)
+++|++++|+++.++.+++.++++.++++++|++.+....+... ....+.............+.++....... .
T Consensus 108 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (600)
T PRK08279 108 AKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAPT 187 (600)
T ss_pred HhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCCc
Confidence 99999999999999999999999999999999998766554321 11222222221111112222222111110 1
Q ss_pred --CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhccc
Q 041055 199 --ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCC 276 (526)
Q Consensus 199 --~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~ 276 (526)
........++++++++|||||||.||+|++||+++.+.+......+. +.++++++..+|++|.+|+...++.++..
T Consensus 188 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~--l~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 265 (600)
T PRK08279 188 TNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLR--LTPDDVLYCCLPLYHNTGGTVAWSSVLAA 265 (600)
T ss_pred cCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcC--CCCCcEEEEecCchhhhhHHHHHHHHHhc
Confidence 11112345689999999999999999999999999998887776665 67899999999999999997777788899
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+++++.+.+++..+++.++++++|++.++|+++..+++.. .......++|.+ +|+++++++.++|.+.++...+++
T Consensus 266 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 266 GATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 99999999999999999999999999999999999988762 223344567654 477899999999999997667999
Q ss_pred ccccccccceeecccCcccccCCCCcccccCC----CcEEEEEeCCCC----------ccCCCCCcceEE--Eecccccc
Q 041055 356 GYGLTESCGATTFMVSPKQARARSGSCGALSP----TFYAKVVDTETR----------LALPPYQRGELW--LKSPTIMR 419 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~----~~~~~ivd~~~~----------~~~~~g~~Gel~--v~~~~~~~ 419 (526)
.||+||++..+... ....+++|.+.+ +..+..++.+.+ .++++|+.|||+ +.+++++.
T Consensus 344 ~YG~tE~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~ 417 (600)
T PRK08279 344 FYAASEGNVGFINV------FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFD 417 (600)
T ss_pred eecccccceeeccc------CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccc
Confidence 99999987543321 112567777665 333332222211 357899999998 67899999
Q ss_pred ccCCCHHHHhccc------CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeee
Q 041055 420 GYFGNEEATAAAF------DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLE 493 (526)
Q Consensus 420 gy~~~~~~t~~~~------~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~ 493 (526)
|| ++++.+.+.| +.++||+|||+|++++||.+++.||.||+||++|++|+|.|||++|.+||+|.+|+|++++
T Consensus 418 GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~ 496 (600)
T PRK08279 418 GY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVE 496 (600)
T ss_pred cc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEee
Confidence 99 8898888775 2368999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 494 DEE-AGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 494 ~~~-~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
++. .++..+++++..++...+.++++++|+++|
T Consensus 497 ~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L 530 (600)
T PRK08279 497 VPGTDGRAGMAAIVLADGAEFDLAALAAHLYERL 530 (600)
T ss_pred cCCCCCccceeEEEecCCccCCHHHHHHHHHhhC
Confidence 764 355667777777666778899999999875
No 85
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4e-62 Score=604.95 Aligned_cols=452 Identities=24% Similarity=0.325 Sum_probs=388.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++++.+... ++..| +++|+++. ++++||+||.++++++|+.|.+ +|+++|++|+++++|++++++++|||+++
T Consensus 511 ~~~~~~~~~~-a~~~p--~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~-~gv~~g~~V~l~~~~s~~~i~~~la~~~a 584 (5163)
T PRK12316 511 RGVHRLFEEQ-VERTP--EAPALAFG--EETLDYAELNRRANRLAHALIE-RGVGPDVLVGVAMERSIEMVVALLAILKA 584 (5163)
T ss_pred CCHHHHHHHH-HHHCC--CCeEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHc
Confidence 4688888777 67777 79999974 6899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLT 206 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (526)
|++++|++|.++.+++.++++++++++++++......+... ...++.++... .+ .... . ...+.....
T Consensus 585 G~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~-~-~~~~~~~~~ 653 (5163)
T PRK12316 585 GGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRPA------AW---LEGY-S-EENPGTELN 653 (5163)
T ss_pred CCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCcc------hh---hccC-C-CCCCCCCCC
Confidence 99999999999999999999999999999988765544322 33344333210 00 0000 0 111222456
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec--
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-- 284 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-- 284 (526)
++++++|+|||||||.||||+++|+++.+.+.+....++ +.++++++...|++|..++ ..++.++..|+++++.+
T Consensus 654 ~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~--~~~~d~~l~~~p~~fd~~~-~~~~~~L~~G~~l~i~~~~ 730 (5163)
T PRK12316 654 PENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYG--LGVGDTVLQKTPFSFDVSV-WEFFWPLMSGARLVVAAPG 730 (5163)
T ss_pred CCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcC--CCCCCEEEeeCCeehHHHH-HHHHHHHhCCCEEEECCcc
Confidence 789999999999999999999999999999888887776 6789999999999999998 67889999999999985
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESC 363 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~ 363 (526)
.+++..+++.++++++|++.++|+++..|++... ...++++|.+++||+++++++.+.|.+.++++++++.||+||++
T Consensus 731 ~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 809 (5163)
T PRK12316 731 DHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED-VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAA 809 (5163)
T ss_pred ccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc-cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChhe
Confidence 4789999999999999999999999999987532 34678999999999999999999999998889999999999998
Q ss_pred ceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccC------CCCe
Q 041055 364 GATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFD------EDGW 437 (526)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~------~~~~ 437 (526)
..++....... .....++|+|++|++++|+| ++++++|.|+.|||+|+|+++++||+++|+.|+++|. .++|
T Consensus 810 ~~~~~~~~~~~-~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~ 887 (5163)
T PRK12316 810 IDVTHWTCVEE-GGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERM 887 (5163)
T ss_pred eeeeEEecccc-cCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCee
Confidence 65443322221 22367899999999999999 5688999999999999999999999999999999984 3469
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHH
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQ 517 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~ 517 (526)
|+|||+|++++||.++++||.||+||++|++|+|.|||++|.+||.|.+|+|++.+ ++.++|+|++.++.....++
T Consensus 888 y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~~~~~~ 963 (5163)
T PRK12316 888 YRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGGDWREA 963 (5163)
T ss_pred EecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999986 68999999998877777899
Q ss_pred HHHHHHhcC
Q 041055 518 VMQFVTSQL 526 (526)
Q Consensus 518 l~~~l~~~l 526 (526)
++++++++|
T Consensus 964 l~~~l~~~L 972 (5163)
T PRK12316 964 LKAHLAASL 972 (5163)
T ss_pred HHHHHHhhC
Confidence 999999875
No 86
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-61 Score=500.54 Aligned_cols=461 Identities=27% Similarity=0.382 Sum_probs=385.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.|+.+.+... .++.+ +++|+++. ++.+||.||.+++.++|..|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 12 ~~~~~~~~~~-~~~~~--~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~~~~V~i~~~~~~~~~~~~la~~~~ 85 (524)
T PRK06188 12 ATYGHLLVSA-LKRYP--DRPALVLG--DTRLTYGQLADRISRYIQAFEA-LGLGTGDAVALLSLNRPEVLMAIGAAQLA 85 (524)
T ss_pred ccHHHHHHHH-HHHCC--CCeEEEEC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 5788888877 56666 79999984 5899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcch-hHHHhhc--C---CCC-EEEEcCCCCCCCcchHHHHhhhcCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASE-ELQKLTK--V---NVP-IIVTSRDQSNNKSVSVEELIECCDAADEL 200 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~--~---~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (526)
|++++|++|..+.+++.++++.++++.+++++. ....... . ... ++...... ....+.+....... ...
T Consensus 86 G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~ 161 (524)
T PRK06188 86 GLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVP---DGVDLLAAAAKFGP-APL 161 (524)
T ss_pred CCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCcc---chhhHHHhhhccCc-ccc
Confidence 999999999999999999999999999999876 2222211 1 111 22222111 11111111111111 111
Q ss_pred CCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEE
Q 041055 201 PGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTI 280 (526)
Q Consensus 201 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 280 (526)
. ....++++++++|||||||.||+|.++|.++..........+. ...++++++.+|++|.+++ . ++.++..|+++
T Consensus 162 ~-~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~--~~~~~~~l~~~pl~~~~g~-~-~~~~l~~G~~~ 236 (524)
T PRK06188 162 V-AAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWE--WPADPRFLMCTPLSHAGGA-F-FLPTLLRGGTV 236 (524)
T ss_pred c-ccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcC--CCcCcEEEEecCchhhhhH-H-HHHHHHcCCEE
Confidence 1 1234566999999999999999999999999988877766665 6788999999999999887 3 46778899999
Q ss_pred EEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccc
Q 041055 281 VVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGL 359 (526)
Q Consensus 281 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~ 359 (526)
++.+.+++..+++.++++++|++.++|+++..+++. ......++++|.+++||++++++..+.+.+.+ +..+.+.||+
T Consensus 237 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~ 315 (524)
T PRK06188 237 IVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQ 315 (524)
T ss_pred EEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCc
Confidence 999999999999999999999999999999999887 33456789999999999999999999999888 5779999999
Q ss_pred ccccceeecccCccc---ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCC
Q 041055 360 TESCGATTFMVSPKQ---ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDG 436 (526)
Q Consensus 360 tE~~~~~~~~~~~~~---~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~ 436 (526)
||++..+........ .....+++|+|++++.++|+|+ ++++++.|+.|||+++|+.++.||++++..+...| .+|
T Consensus 316 tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g 393 (524)
T PRK06188 316 TEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDE-DGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDG 393 (524)
T ss_pred cccCCceeecCchhccccccccCCccccccCCcEEEEEcC-CCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCC
Confidence 999765554332211 1123678999999999999994 58899999999999999999999999999999888 689
Q ss_pred eeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHH
Q 041055 437 WLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTED 516 (526)
Q Consensus 437 ~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~ 516 (526)
||+|||+++++++|.+++.||.+++||++|++|+|.+||++|.++|+|.+++|++.+++..++.+++++++.++...+.+
T Consensus 394 ~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~ 473 (524)
T PRK06188 394 WLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAAVDAA 473 (524)
T ss_pred ceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999887777888
Q ss_pred HHHHHHHhcC
Q 041055 517 QVMQFVTSQL 526 (526)
Q Consensus 517 ~l~~~l~~~l 526 (526)
++++++++++
T Consensus 474 ~l~~~~~~~l 483 (524)
T PRK06188 474 ELQAHVKERK 483 (524)
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 87
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.4e-61 Score=555.16 Aligned_cols=453 Identities=21% Similarity=0.310 Sum_probs=380.2
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|+++. ++.+||+||.+++.++|+.|.+ .|+++|++|+++++|+++++++++||+++
T Consensus 458 ~~l~~~~~~~-~~~~p--~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~g~~V~l~~~~~~~~i~~~la~~~~ 531 (1296)
T PRK10252 458 TTLSALVAQQ-AAKTP--DAPALADA--RYQFSYREMREQVVALANLLRE-RGVKPGDSVAVALPRSVFLTLALHAIVEA 531 (1296)
T ss_pred CCHHHHHHHH-HHhCC--CCeEEEcC--CCcEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 4677877777 56666 79999984 6789999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLT 206 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (526)
|++++|++|.++.+++.++++++++++++++.+....+... ....+.... ..... ...+.....
T Consensus 532 G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------~~~~~---~~~~~~~~~ 596 (1296)
T PRK10252 532 GAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYNA------------PLAPQ---GAAPLQLSQ 596 (1296)
T ss_pred CCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeeccc------------ccccc---cCCCCCCCC
Confidence 99999999999999999999999999999998765544321 111111110 00000 011111335
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec--
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-- 284 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-- 284 (526)
++++++++|||||||.||||+++|+++.+.+.+....++ +.++|+++...|++|..++ ..++.++..|+++++.+
T Consensus 597 ~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~~~~ 673 (1296)
T PRK10252 597 PHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYP--LTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLVMAEPE 673 (1296)
T ss_pred CCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcC--CCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEEECChh
Confidence 789999999999999999999999999998888877776 6789999999999998887 67788999999999976
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc-C--CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK-D--SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLT 360 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~--~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~t 360 (526)
..++..+++.++++++|++.++|+++..+++... . ...++++|.+++||+++++++.+.|.+.+ ++++++.||+|
T Consensus 674 ~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~T 752 (1296)
T PRK10252 674 AHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPT 752 (1296)
T ss_pred ccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcc
Confidence 4689999999999999999999999999887622 1 23568999999999999999999999987 78999999999
Q ss_pred cccceeecccCcccc----cCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCC-
Q 041055 361 ESCGATTFMVSPKQA----RARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDED- 435 (526)
Q Consensus 361 E~~~~~~~~~~~~~~----~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~- 435 (526)
|++..++........ .....++|+|++++.++|+| +.+++++.|+.|||+|+|+++++||+++++.|.++|..+
T Consensus 753 E~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~ 831 (1296)
T PRK10252 753 EAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADP 831 (1296)
T ss_pred hhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCC
Confidence 998766544322211 22256899999999999999 678899999999999999999999999999999998543
Q ss_pred -----CeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeee----CCCCC--ceEEEE
Q 041055 436 -----GWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLE----DEEAG--QIPMAY 504 (526)
Q Consensus 436 -----~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~----~~~~~--~~~~a~ 504 (526)
+||+|||+|++++||.++++||.|++||++|++|+|.|||++|.+||+|.+++|+... +...| ..++++
T Consensus 832 ~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~ 911 (1296)
T PRK10252 832 FAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGY 911 (1296)
T ss_pred CCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEE
Confidence 4999999999999999999999999999999999999999999999999999887652 11122 479999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcC
Q 041055 505 VVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 505 vv~~~~~~~~~~~l~~~l~~~l 526 (526)
|+..++...+.++|+++++++|
T Consensus 912 v~~~~~~~~~~~~l~~~l~~~L 933 (1296)
T PRK10252 912 LVSQSGLPLDTSALQAQLRERL 933 (1296)
T ss_pred EEcCCCCCCCHHHHHHHHHhhC
Confidence 9988776677889999999875
No 88
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.9e-61 Score=506.12 Aligned_cols=470 Identities=22% Similarity=0.352 Sum_probs=379.9
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCC-CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSA-THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFS 126 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 126 (526)
+|+.+.+... +...+ ++.|+++.+ .++.+||+||.+++.++|.+|.+..|+++||+|+++++|+++++++++||++
T Consensus 10 ~~~~~~l~~~-a~~~~--~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 10 LSLTRILEYG-STVHG--DTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred CcHHHHHHHH-HHhCC--CceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 7888888877 66666 688887532 3579999999999999999998547999999999999999999999999999
Q ss_pred cCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCC---------CCCcchHHHHh
Q 041055 127 LGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQS---------NNKSVSVEELI 191 (526)
Q Consensus 127 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~---------~~~~~~~~~~~ 191 (526)
+|++++|++|.++.+++.++++.++++++|++......+... ... ++.++.... .....++.++.
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALL 166 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHh
Confidence 999999999999999999999999999999998765544311 122 333322110 11223345444
Q ss_pred hhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHH
Q 041055 192 ECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFAT 271 (526)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 271 (526)
+.... ..+.....++++++++|||||||.||+|.++|+++............+....++++++.+|++|.+++ ...+
T Consensus 167 ~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~-~~~~ 243 (576)
T PRK05620 167 DGRST--VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSW-GVPL 243 (576)
T ss_pred hcCCC--cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhh-HHHH
Confidence 32211 11222456789999999999999999999999998655443222111236789999999999999998 5567
Q ss_pred hhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCC
Q 041055 272 GLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFP 349 (526)
Q Consensus 272 ~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~ 349 (526)
.++..|+++++.. .+++..+++.++++++|+++++|+++..++.. ........++|.+++||+++++.+.++|++.+
T Consensus 244 ~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~- 322 (576)
T PRK05620 244 AAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY- 322 (576)
T ss_pred HHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-
Confidence 7888999988875 57999999999999999999999999998875 22334456899999999999999999999988
Q ss_pred CCceeeccccccccceeecccCcccc-----cCCCCcccccCCCcEEEEEeCCCCccC--CCCCcceEEEeccccccccC
Q 041055 350 WVELRQGYGLTESCGATTFMVSPKQA-----RARSGSCGALSPTFYAKVVDTETRLAL--PPYQRGELWLKSPTIMRGYF 422 (526)
Q Consensus 350 ~~~l~~~yG~tE~~~~~~~~~~~~~~-----~~~~~~~G~~~~~~~~~ivd~~~~~~~--~~g~~Gel~v~~~~~~~gy~ 422 (526)
++++++.||+||++..++........ .....++|++.++++++++|+ +..+ ++++.|||+++|++++.||+
T Consensus 323 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~--g~~~~~~~~~~Gel~v~g~~~~~gY~ 400 (576)
T PRK05620 323 GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND--GQVMESTDRNEGEIQVRGNWVTASYY 400 (576)
T ss_pred CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--CccccCCCCCceEEEEEcCccccccc
Confidence 68999999999998765543321110 011347899999999999995 5555 35788999999999999999
Q ss_pred CCHHHH----------------hcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCccc
Q 041055 423 GNEEAT----------------AAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILD 486 (526)
Q Consensus 423 ~~~~~t----------------~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~ 486 (526)
++++.+ ..+|..+|||+|||++++++||.+++.||.||+||.+|.+|+|.+||++|.+||.|.+
T Consensus 401 ~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~~ 480 (576)
T PRK05620 401 HSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVVE 480 (576)
T ss_pred CCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCceE
Confidence 999888 3345567999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCceEEEEEEeCCCCCC---CHHHHHHHHHhcC
Q 041055 487 AAVIPLEDEEAGQIPMAYVVRAAGSQL---TEDQVMQFVTSQL 526 (526)
Q Consensus 487 ~~vv~~~~~~~~~~~~a~vv~~~~~~~---~~~~l~~~l~~~l 526 (526)
++|++.+++..|+.++++|++.++... +.++|+++|+++|
T Consensus 481 ~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L 523 (576)
T PRK05620 481 CAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRL 523 (576)
T ss_pred EEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhC
Confidence 999999999889999999999887543 4688999999875
No 89
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.4e-62 Score=484.09 Aligned_cols=473 Identities=28% Similarity=0.387 Sum_probs=383.6
Q ss_pred CCCCCCCChhhhhcccCCCCCCCCCceEEEeCC----CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCch
Q 041055 42 IPTRTDLDTATCVLSRFPHPDLAESRVALIDSA----THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLY 117 (526)
Q Consensus 42 ~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~ 117 (526)
..+...+|+...+..+..+.. ..+.+|++... +...+||.|+.+++.++|..|.+ +|+++||+|++++|+.+++
T Consensus 57 w~~g~~ln~~~n~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-~g~~kGD~V~~~mPm~~e~ 134 (626)
T KOG1175|consen 57 WFPGAFLNACYNCLDRHIKEK-GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-CGLKKGDTVAIYMPMIPEA 134 (626)
T ss_pred ccccchhhhhHhhhhhhhhhc-CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-cCCCCCcEEEEeccCChHH
Confidence 344555777777776643333 33677776431 23458999999999999999995 9999999999999999999
Q ss_pred HHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCC-------------------CCEEEEcCC
Q 041055 118 PSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVN-------------------VPIIVTSRD 178 (526)
Q Consensus 118 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------------------~~~i~~~~~ 178 (526)
+++++||+++|++.+++...+++.++..++++++++++++.+......+... ...+.+...
T Consensus 135 ~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 214 (626)
T KOG1175|consen 135 VIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRR 214 (626)
T ss_pred HHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecc
Confidence 9999999999999999999999999999999999999999865433221110 001111111
Q ss_pred CCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHH-HHHHHHhhhhcccCCCCcEEEEe
Q 041055 179 QSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFI-SIMQLLRWTVDVTHAQNDIFLCM 257 (526)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~-~~~~~~~~~~~~~~~~~~~~l~~ 257 (526)
.....+.+......+ ..++...+.+|+.+|+|||||||.||++.+++.... ..+......+. +.++|++++.
T Consensus 215 ---~~d~~~~~~~~~a~~--~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d--~q~~dv~~~~ 287 (626)
T KOG1175|consen 215 ---NRDLFWSLELKKASP--EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFD--LQPSDVLWCA 287 (626)
T ss_pred ---cccccHHHHhhhcCC--CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceecc--CCCcceEEEe
Confidence 113334444333333 223447788999999999999999999999887644 44444555555 7899999999
Q ss_pred CChhHHHHHHHHHHhhcccCcEEEEec--CCCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceEEEEe
Q 041055 258 IPMFHIYGLAFFATGLFCCGVTIVVMQ--RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRRVGSG 332 (526)
Q Consensus 258 ~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~v~~g 332 (526)
....|+.|..+..+.+++.|+++++.. ++++..+++.+.++++|++++.|+.++.|.+.. .....+++||++.+.
T Consensus 288 ~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~ 367 (626)
T KOG1175|consen 288 SDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSV 367 (626)
T ss_pred cccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeec
Confidence 999999999888899999999999985 469999999999999999999999999888772 234455789999999
Q ss_pred cCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCC-CcceEE
Q 041055 333 AAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPY-QRGELW 411 (526)
Q Consensus 333 G~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g-~~Gel~ 411 (526)
||++.++..+++.+.+...+|.+.||+||+|+.++.+..... .-++++.+.|++++.+.|+|+ +|..++++ +.|+|+
T Consensus 368 Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~-p~~pg~~~~p~~g~~v~i~de-~g~~~~~~~~~G~l~ 445 (626)
T KOG1175|consen 368 GEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL-PIKPGSAGKPFPGYDVQILDE-NGNELPPSTGNGELR 445 (626)
T ss_pred CccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC-CcCccccCCCCCCcceEEECC-CCCCcCCCCceeEEE
Confidence 999999999999999944479999999999998887766553 234899999999999999995 77788776 889999
Q ss_pred Eec--c-ccccccCCCHHHHhcc-c-CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCccc
Q 041055 412 LKS--P-TIMRGYFGNEEATAAA-F-DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILD 486 (526)
Q Consensus 412 v~~--~-~~~~gy~~~~~~t~~~-~-~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~ 486 (526)
++. | +.+++||+|++....+ | .-.|+|.|||.+++|+||++|+.||.||+|+++|+|+++.|||++|.+||.|.|
T Consensus 446 ~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaE 525 (626)
T KOG1175|consen 446 LKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAE 525 (626)
T ss_pred EeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhh
Confidence 998 4 8899999999944433 3 237899999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhc
Q 041055 487 AAVIPLEDEEAGQIPMAYVVRAAGSQLTE---DQVMQFVTSQ 525 (526)
Q Consensus 487 ~~vv~~~~~~~~~~~~a~vv~~~~~~~~~---~~l~~~l~~~ 525 (526)
++||+.+++..||.++|||+++++...++ ++|++.+|+.
T Consensus 526 sAvVg~p~~~~ge~v~aFvvl~~g~~~~~~L~kel~~~VR~~ 567 (626)
T KOG1175|consen 526 SAVVGSPDPIKGEVVLAFVVLKSGSHDPEQLTKELVKHVRSV 567 (626)
T ss_pred eeeecCCCCCCCeEEEEEEEEcCCCCChHHHHHHHHHHHHhh
Confidence 99999999999999999999999954443 3455555543
No 90
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.4e-62 Score=603.18 Aligned_cols=456 Identities=21% Similarity=0.287 Sum_probs=388.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++++.+..+ ++..| +++|+++. ++.+||+||.+++.++|..|.+ +|+++|++|+++++|++++++++|||+++
T Consensus 2003 ~~~~~~~~~~-a~~~p--~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~~~~~lAil~a 2076 (5163)
T PRK12316 2003 PGVHQRIAEQ-AARAP--EAIAVVFG--DQHLSYAELDSRANRLAHRLRA-RGVGPEVRVAIAAERSFELVVALLAVLKA 2076 (5163)
T ss_pred CCHHHHHHHH-HHhCC--CCeEEEcC--CCeEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHhh
Confidence 4678877766 67777 79999974 6799999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc-CCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK-VNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLT 206 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (526)
|++++|++|.++.+++.++++++++++++++.+....+.. .....+.++.. ..+.+ . . ...+.....
T Consensus 2077 Ga~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~------~~~~~----~-~-~~~~~~~~~ 2144 (5163)
T PRK12316 2077 GGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRD------AEWAD----Y-P-DTAPAVQLA 2144 (5163)
T ss_pred ceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccch------hhhhc----c-C-ccCCCCCCC
Confidence 9999999999999999999999999999999876554432 12222222211 00000 0 0 111222457
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec--
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-- 284 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-- 284 (526)
++++++|+|||||||.||||+++|+++.+.+......++ ..++++++...|++|..++ ..++.++..|+++++.+
T Consensus 2145 ~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~~~~~~~~ 2221 (5163)
T PRK12316 2145 GENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYE--LSPADCELQFMSFSFDGAH-EQWFHPLLNGARVLIRDDE 2221 (5163)
T ss_pred CCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcC--CCCcceEEEecCchHHHHH-HHHHHHHhCCCEEEeCCcc
Confidence 899999999999999999999999999998888777766 6789999999999998777 77889999999997765
Q ss_pred CCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccc
Q 041055 285 RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCG 364 (526)
Q Consensus 285 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~ 364 (526)
.+++..+++.++++++|++.++|+++..+.+.........+||.+++|||++++++.++|.+.+++..+++.||+||++.
T Consensus 2222 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 2301 (5163)
T PRK12316 2222 LWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVV 2301 (5163)
T ss_pred cCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhhee
Confidence 36899999999999999999999999999876433334458999999999999999999999988899999999999987
Q ss_pred eeecccCccccc--CCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC-------C
Q 041055 365 ATTFMVSPKQAR--ARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE-------D 435 (526)
Q Consensus 365 ~~~~~~~~~~~~--~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~-------~ 435 (526)
.++......... ....++|+|++|++++|+| ++++++|.|+.|||+|+|+++++||+++|+.|+++|.. +
T Consensus 2302 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~ 2380 (5163)
T PRK12316 2302 TPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGE 2380 (5163)
T ss_pred eeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCC
Confidence 655432211111 1135799999999999999 56789999999999999999999999999999999843 4
Q ss_pred CeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH
Q 041055 436 GWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE 515 (526)
Q Consensus 436 ~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~ 515 (526)
+||+|||+|++++||.++++||+|++||++|++|+|.|||++|.++|+|.+++|++.++. .++.++|||++.++...+.
T Consensus 2381 ~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~~~~~~~ 2459 (5163)
T PRK12316 2381 RLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLVAYVVPDDAAEDLL 2459 (5163)
T ss_pred eeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEEEEEEecCCCccCH
Confidence 699999999999999999999999999999999999999999999999999999998776 7889999999998877888
Q ss_pred HHHHHHHHhcC
Q 041055 516 DQVMQFVTSQL 526 (526)
Q Consensus 516 ~~l~~~l~~~l 526 (526)
++++++++++|
T Consensus 2460 ~~l~~~l~~~L 2470 (5163)
T PRK12316 2460 AELRAWLAARL 2470 (5163)
T ss_pred HHHHHHHHhhC
Confidence 99999999875
No 91
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.4e-61 Score=589.34 Aligned_cols=457 Identities=23% Similarity=0.309 Sum_probs=386.1
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++++.+..+ ++..| +++|+++. ++.+||+||.++++++|+.|.+ +|+++|++|++++++++++++++|||+++
T Consensus 1574 ~~~~~~~~~~-a~~~p--~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~~~~V~l~~~~s~~~vv~~lavlka 1647 (3956)
T PRK12467 1574 RLVHQLIEDQ-AAATP--EAVALVFG--EQELTYGELNRRANRLAHRLIA-LGVGPEVLVGIAVERSLEMVVGLLAILKA 1647 (3956)
T ss_pred ccHHHHHHHH-HHhCC--CCeEEEeC--CcEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEccCCHHHHHHHHHhhcc
Confidence 4677877777 66777 79999984 6899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLT 206 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (526)
|++++|++|.++.+++.++++++++++++++......+... ..+++.++... .+ .... . ...+.....
T Consensus 1648 G~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~-~-~~~~~~~~~ 1716 (3956)
T PRK12467 1648 GGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQED------DW---LEGY-S-DSNPAVNLA 1716 (3956)
T ss_pred CceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEecccc------ch---hccC-C-CCCCCCCCC
Confidence 99999999999999999999999999999988765554321 23344443211 00 0000 0 111222456
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC-
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR- 285 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~- 285 (526)
++++++|+|||||||+||||+++|+++.+.+......++ +.++++++...|++|..++ ..++.+++.|+++++.+.
T Consensus 1717 ~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi~~~~ 1793 (3956)
T PRK12467 1717 PQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQ--LSAADVVLQFTSFAFDVSV-WELFWPLINGARLVIAPPG 1793 (3956)
T ss_pred CcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcC--CCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEEcChh
Confidence 789999999999999999999999999998888777766 6789999999999999887 678899999999999863
Q ss_pred --CCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccc
Q 041055 286 --FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESC 363 (526)
Q Consensus 286 --~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~ 363 (526)
.++..+++.|+++++|++.++|+++..|.+.......++++|.+++|||++++++.+.|.+.+++..++|.||+||++
T Consensus 1794 ~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t 1873 (3956)
T PRK12467 1794 AHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETA 1873 (3956)
T ss_pred hcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCE
Confidence 578999999999999999999999999987533445678999999999999999999999999888999999999998
Q ss_pred ceeecccCcc--cccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccC-------C
Q 041055 364 GATTFMVSPK--QARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFD-------E 434 (526)
Q Consensus 364 ~~~~~~~~~~--~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~-------~ 434 (526)
..++...... .......++|+|++|+.++|+| +.++++|.|+.|||+|+|+++++||+++|+.|+++|. +
T Consensus 1874 ~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~ 1952 (3956)
T PRK12467 1874 VDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVG 1952 (3956)
T ss_pred EeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCC
Confidence 7665433211 1111256899999999999999 6788999999999999999999999999999999984 2
Q ss_pred CCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCC-
Q 041055 435 DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQL- 513 (526)
Q Consensus 435 ~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~- 513 (526)
++||+|||+|++++||.++++||.||+||++|++|+|.|||++|.++|+|.+|+|++.+ ...++.++|+|+..++...
T Consensus 1953 ~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lva~vv~~~~~~~~ 2031 (3956)
T PRK12467 1953 SRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIAQD-GANGKQLVAYVVPTDPGLVD 2031 (3956)
T ss_pred ccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEEec-CCCCcEEEEEEEecCccccc
Confidence 35999999999999999999999999999999999999999999999999999999987 4567899999998755322
Q ss_pred -------CHHHHHHHHHhcC
Q 041055 514 -------TEDQVMQFVTSQL 526 (526)
Q Consensus 514 -------~~~~l~~~l~~~l 526 (526)
..++++++++++|
T Consensus 2032 ~~~~~~~~~~~l~~~l~~~L 2051 (3956)
T PRK12467 2032 DDEAQVALRAILKNHLKASL 2051 (3956)
T ss_pred ccccccccHHHHHHHHHhhC
Confidence 3467888888765
No 92
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-60 Score=495.61 Aligned_cols=465 Identities=24% Similarity=0.343 Sum_probs=375.4
Q ss_pred CCChhhhhcccCCCCCCCCCceEEEeC--CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 47 DLDTATCVLSRFPHPDLAESRVALIDS--ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
++++.+++... ++.++ ++++++.. +..+++||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||
T Consensus 9 ~~~~~~~~~~~-a~~~~--~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~v~i~~~~~~~~~~~~la~ 84 (542)
T PRK06018 9 PLLCHRIIDHA-ARIHG--NREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-DGIKLGDRVATIAWNTWRHLEAWYGI 84 (542)
T ss_pred CCCHHHHHHHH-HHhCC--CceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 37899988777 66777 79999852 234789999999999999999998 99999999999999999999999999
Q ss_pred HHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCC-----CCCcchHHHHhhh
Q 041055 125 FSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQS-----NNKSVSVEELIEC 193 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~-----~~~~~~~~~~~~~ 193 (526)
+++|++++|+++.++.+++.++++.+++++++++.+..+.+... ... +++...... ......+.++...
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (542)
T PRK06018 85 MGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIAE 164 (542)
T ss_pred HhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhcc
Confidence 99999999999999999999999999999999988765544311 222 222221110 0122233333322
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHH-HHH-HHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHH
Q 041055 194 CDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFI-SIM-QLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFAT 271 (526)
Q Consensus 194 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~-~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 271 (526)
... ........++++++++|||||||.||+|.+||++.+ ... ......++ ...+|+++...|++|.+++ ...+
T Consensus 165 ~~~--~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~--~~~~d~~~~~~p~~h~~~~-~~~~ 239 (542)
T PRK06018 165 ADG--DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALG--TSAADTMLPVVPLFHANSW-GIAF 239 (542)
T ss_pred CCc--ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcC--CCCCCEEEEecCHHHHhhh-HHHH
Confidence 111 111123466789999999999999999999999743 222 22223333 6788999999999999988 4445
Q ss_pred hhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCC
Q 041055 272 GLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFP 349 (526)
Q Consensus 272 ~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~ 349 (526)
.++..|+++++.. .+++..+++.++++++|++.++|+++..+.+. .....+++++|.++++|+++++++.++|++ +
T Consensus 240 ~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~- 317 (542)
T PRK06018 240 SAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M- 317 (542)
T ss_pred hhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-
Confidence 6788899988764 67899999999999999999999999999876 334557789999999999999999999999 6
Q ss_pred CCceeeccccccccceeecccCcccc--------cCCCCcccccCCCcEEEEEeCCCCccCCCC--CcceEEEecccccc
Q 041055 350 WVELRQGYGLTESCGATTFMVSPKQA--------RARSGSCGALSPTFYAKVVDTETRLALPPY--QRGELWLKSPTIMR 419 (526)
Q Consensus 350 ~~~l~~~yG~tE~~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g--~~Gel~v~~~~~~~ 419 (526)
++++++.||+||++.+++.+..+... .....++|+|.++++++|+|+ ++++++.+ ..|||+++|++++.
T Consensus 318 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~-~~~~~~~~~~~~Gel~i~g~~~~~ 396 (542)
T PRK06018 318 GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD-AGKELPWDGKTFGRLKVRGPAVAA 396 (542)
T ss_pred CCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC-CCCCCCCCCCceeEEEEecCCcch
Confidence 78999999999998766543211110 001357899999999999994 67777653 57999999999999
Q ss_pred ccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCc
Q 041055 420 GYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQ 499 (526)
Q Consensus 420 gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~ 499 (526)
||+++ +...++.++||+|||+++++++|++++.||.+|+||.+|.+|+|.|||.++.+||.|.+|+|++.+++..++
T Consensus 397 gy~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~ 473 (542)
T PRK06018 397 AYYRV---DGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDE 473 (542)
T ss_pred hhhcC---cccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCc
Confidence 99984 334556789999999999999999999999999999999999999999999999999999999999988899
Q ss_pred eEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 500 IPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 500 ~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
.+.++|++.++...+.++++++++++|
T Consensus 474 ~~~~~v~~~~~~~~~~~~l~~~~~~~l 500 (542)
T PRK06018 474 RPLLIVQLKPGETATREEILKYMDGKI 500 (542)
T ss_pred eeEEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 999999999888888889999998875
No 93
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.7e-60 Score=500.08 Aligned_cols=466 Identities=25% Similarity=0.363 Sum_probs=367.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
+|....+... +...| +++|+++. ++.+||+||.+++.++|.+|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 20 ~~~~~~~~~~-~~~~p--~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~~~~~~~la~~~~ 93 (567)
T PLN02479 20 LTPLWFLERA-AVVHP--TRKSVVHG--SVRYTWAQTYQRCRRLASALAK-RSIGPGSTVAVIAPNIPAMYEAHFGVPMA 93 (567)
T ss_pred cCHHHHHHHH-HhhCC--CceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHHhC
Confidence 5566665555 55566 79999884 5789999999999999999997 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc------------CCCC-EEEEcCCCC---------CCCcc
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK------------VNVP-IIVTSRDQS---------NNKSV 185 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~------------~~~~-~i~~~~~~~---------~~~~~ 185 (526)
|++++|+++.++.+++.+++++++++++++++...+.... ...+ ++++..... ..+..
T Consensus 94 G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (567)
T PLN02479 94 GAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAI 173 (567)
T ss_pred CcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcc
Confidence 9999999999999999999999999999998876443221 0112 233321110 01222
Q ss_pred hHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHH
Q 041055 186 SVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYG 265 (526)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g 265 (526)
.+.++.....+.... ......+++++++|||||||.||+|++||+++..........+. +.+++++++.+|++|.++
T Consensus 174 ~~~~~~~~~~~~~~~-~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~h~~~ 250 (567)
T PLN02479 174 EYEKFLETGDPEFAW-KPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWG--MNEGAVYLWTLPMFHCNG 250 (567)
T ss_pred cHHHHHhcccccccc-CCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcC--CCCCCEEEEecchhhhhh
Confidence 344433322111110 11223356788999999999999999999998765544444444 577899999999999999
Q ss_pred HHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhccC--CCCCCCceEEEEecCCCCHHHHHH
Q 041055 266 LAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD--SSYLTSLRRVGSGAAPLSKELADE 343 (526)
Q Consensus 266 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~l~~lr~v~~gG~~l~~~~~~~ 343 (526)
+.......+..|.++ .+..+++..+++.++++++|++..+|+++..|.+.... ...+++++.++++|+++++++.++
T Consensus 251 ~~~~~~~~~~~g~~~-~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~ 329 (567)
T PLN02479 251 WCFTWTLAALCGTNI-CLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFA 329 (567)
T ss_pred HHHHHHHHhhcCceE-eccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHH
Confidence 855444455556554 45678999999999999999999999999999876322 236789999999999999999999
Q ss_pred HHHhCCCCceeeccccccccceeecccCc--------ccccCCCCcccccCCCcE-EEEEeCCCCccCCCC--CcceEEE
Q 041055 344 FRAKFPWVELRQGYGLTESCGATTFMVSP--------KQARARSGSCGALSPTFY-AKVVDTETRLALPPY--QRGELWL 412 (526)
Q Consensus 344 ~~~~~~~~~l~~~yG~tE~~~~~~~~~~~--------~~~~~~~~~~G~~~~~~~-~~ivd~~~~~~~~~g--~~Gel~v 412 (526)
|.+. +.++++.||+||+++.++.+... ........+.|.+.+++. ++|+|++++.+++.+ +.|||++
T Consensus 330 ~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v 407 (567)
T PLN02479 330 MSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVM 407 (567)
T ss_pred HHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEE
Confidence 9875 68999999999986544332110 000111245778888875 889997778888764 6799999
Q ss_pred eccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEee
Q 041055 413 KSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPL 492 (526)
Q Consensus 413 ~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~ 492 (526)
+|++++.|||++++.|.+.| .+|||+|||+++++++|+++++||.||+||++|++|+|.|||.+|.+||.|.+++|++.
T Consensus 408 ~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~ 486 (567)
T PLN02479 408 RGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVAR 486 (567)
T ss_pred eccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEec
Confidence 99999999999999999999 58999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceEEEEEEeCCCCC-----CCHHHHHHHHHhcC
Q 041055 493 EDEEAGQIPMAYVVRAAGSQ-----LTEDQVMQFVTSQL 526 (526)
Q Consensus 493 ~~~~~~~~~~a~vv~~~~~~-----~~~~~l~~~l~~~l 526 (526)
++...++.++++|++.++.. ...++|+++++++|
T Consensus 487 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l 525 (567)
T PLN02479 487 PDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERL 525 (567)
T ss_pred cchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhc
Confidence 98888899999999887642 33467888888765
No 94
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=8.1e-60 Score=489.46 Aligned_cols=462 Identities=26% Similarity=0.397 Sum_probs=380.6
Q ss_pred CChhhhhcccC-CCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHH
Q 041055 48 LDTATCVLSRF-PHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFS 126 (526)
Q Consensus 48 ~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 126 (526)
+|....++... ++..| +++|+++. ++.+||.||.++++++|++|.+ .|+++|++|+++++|+++|+++++||++
T Consensus 3 ~~~~~~~~~~~~~~~~p--~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~v~l~~~~~~~~~~~~~a~~~ 77 (508)
T TIGR02262 3 YNAAEDLLDRNVVEGRG--GKTAFIDD--ISSLSYGELEAQVRRLGAALRR-LGVKREERVLLLMLDGVDFPIAFLGAIR 77 (508)
T ss_pred chHHHHHHHHHHhcccC--CceEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 44455554442 23355 79999984 6899999999999999999997 9999999999999999999999999999
Q ss_pred cCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCCCCCcchHHHHhhhcCCCCCC
Q 041055 127 LGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQSNNKSVSVEELIECCDAADEL 200 (526)
Q Consensus 127 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (526)
+|++++|+++.++.+++.++++.+++++++++......+... ... ++..+.. ......+.+..... . ...
T Consensus 78 ~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~-~~~ 153 (508)
T TIGR02262 78 AGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRP--EAGEVQLAELLATE-S-EQF 153 (508)
T ss_pred cCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCC--CcccccHHHHhhcC-C-Ccc
Confidence 999999999999999999999999999999998765544321 111 2333221 11222333322211 1 111
Q ss_pred CCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHH-HhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcE
Q 041055 201 PGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQL-LRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVT 279 (526)
Q Consensus 201 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~ 279 (526)
......++++++++|||||||.||+|.++|+++...+.. ....++ ..++|+++..+|++|.+++...++.++..|++
T Consensus 154 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 231 (508)
T TIGR02262 154 KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLG--IREDDVVFSAAKLFFAYGLGNALTFPMSVGAT 231 (508)
T ss_pred CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcC--CCCCCEEEEcCchHHHHHHHHHHHHHHHcCce
Confidence 112445789999999999999999999999999877655 333344 67899999999999999986777778889998
Q ss_pred EEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 280 IVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 280 ~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
+++.+ .+++..+++.|+++++|++.++|+++..+++.. .......++|.+++||+++++++.+.|.+.+ ++++++.|
T Consensus 232 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~Y 310 (508)
T TIGR02262 232 TVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGI 310 (508)
T ss_pred EEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCc
Confidence 88875 468999999999999999999999998887652 2234567899999999999999999999999 68999999
Q ss_pred ccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCe
Q 041055 358 GLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGW 437 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~ 437 (526)
|+||++.+++..... ....+++|+|.+++.++++| +++.++++|+.|||+++|++++.||+++++.+...| .++|
T Consensus 311 G~tE~~~~~~~~~~~---~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~ 385 (508)
T TIGR02262 311 GSTEMLHIFLSNLPG---DVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEW 385 (508)
T ss_pred cccccCceeecCCcc---CCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCc
Confidence 999998765543221 12267899999999999999 778999999999999999999999999999999888 5799
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC---CC
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ---LT 514 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~---~~ 514 (526)
|+|||+++++++|.+++.||.||+||.+|.+|+|.+||++|.++|+|.++++++.++...++.+.+++++.++.. ..
T Consensus 386 ~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 465 (508)
T TIGR02262 386 TRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTAL 465 (508)
T ss_pred eeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCcccccc
Confidence 999999999999999999999999999999999999999999999999999999988777889999999877643 33
Q ss_pred HHHHHHHHHhcC
Q 041055 515 EDQVMQFVTSQL 526 (526)
Q Consensus 515 ~~~l~~~l~~~l 526 (526)
.++++++++++|
T Consensus 466 ~~~i~~~~~~~l 477 (508)
T TIGR02262 466 ETELKEHVKDRL 477 (508)
T ss_pred HHHHHHHHHHhc
Confidence 578888888764
No 95
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-59 Score=491.11 Aligned_cols=467 Identities=28% Similarity=0.456 Sum_probs=375.4
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+... ++..| +++|+++. ++.+||.||.++++++|.+|.++.|+++|++|+++++|++++++++|||+++
T Consensus 23 ~~l~~~l~~~-a~~~p--~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 97 (560)
T PRK08974 23 QSLVDMFEQA-VARYA--DQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRA 97 (560)
T ss_pred ccHHHHHHHH-HHhCC--CCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 3577776655 55666 79999974 6799999999999999999974489999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc----CCCCEEEEcCCCCC----------------------
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK----VNVPIIVTSRDQSN---------------------- 181 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~~i~~~~~~~~---------------------- 181 (526)
|++++|++|..+.+++.++++.+++++++++++....+.. .....+........
T Consensus 98 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08974 98 GMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPK 177 (560)
T ss_pred CcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhccccccc
Confidence 9999999999999999999999999999998754433321 12222222110000
Q ss_pred ---CCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc-ccCCCCcEEEEe
Q 041055 182 ---NKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD-VTHAQNDIFLCM 257 (526)
Q Consensus 182 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~ 257 (526)
....++.+....... .........++++++++|||||||.||+|.++|+++...+......+. ......+.++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08974 178 YHLPDAISFRSALHKGRR-MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTA 256 (560)
T ss_pred ccCCCcccHHHHhhccCC-CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEe
Confidence 000011111110000 111111346789999999999999999999999999876654433322 112446788899
Q ss_pred CChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCC
Q 041055 258 IPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAP 335 (526)
Q Consensus 258 ~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~ 335 (526)
+|++|.+++....+..+..|+++++. ...++..+++.++++++|.+.++|+++..+.+. ......++++|.+++||++
T Consensus 257 ~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~ 336 (560)
T PRK08974 257 LPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMA 336 (560)
T ss_pred CcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCcc
Confidence 99999999866666777788876665 456889999999999999999999999999876 2334567899999999999
Q ss_pred CCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecc
Q 041055 336 LSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSP 415 (526)
Q Consensus 336 l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~ 415 (526)
+++.+.++|++.+ ++++++.||+||++..++.+.... ....+++|.|+|++.++|+|+ ++.+++.|+.|||+++|+
T Consensus 337 ~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~~Gel~v~g~ 412 (560)
T PRK08974 337 VQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDL--DYYSGSIGLPVPSTEIKLVDD-DGNEVPPGEPGELWVKGP 412 (560)
T ss_pred CCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCC--cccCCccccCcCCCEEEEECC-CCCCCCCCCceEEEEecC
Confidence 9999999999987 789999999999987766544322 122678999999999999994 678999999999999999
Q ss_pred ccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCC
Q 041055 416 TIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDE 495 (526)
Q Consensus 416 ~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~ 495 (526)
.++.||+++++.+...| .+|||+|||+++++++|.++++||.+|+|+++|.+|+|.+||++|.++|+|.+++|++.+++
T Consensus 413 ~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~ 491 (560)
T PRK08974 413 QVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSE 491 (560)
T ss_pred CcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecC
Confidence 99999999999999888 68999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 496 EAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 496 ~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
..++.++++|+..+ ...+.++++++++++|
T Consensus 492 ~~g~~~~~~v~~~~-~~~~~~~l~~~l~~~l 521 (560)
T PRK08974 492 VSGEAVKIFVVKKD-PSLTEEELITHCRRHL 521 (560)
T ss_pred CcceEEEEEEECCC-CCCCHHHHHHHHHhhc
Confidence 88888888887654 3456678888888764
No 96
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3.3e-60 Score=492.07 Aligned_cols=453 Identities=20% Similarity=0.241 Sum_probs=370.1
Q ss_pred hhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCC
Q 041055 50 TATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGA 129 (526)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 129 (526)
+.+.+... +...| +++|+.+. ++.+||+||.+++.++|..|.+ .|+++|++|+++++|+.+++++++||+++|+
T Consensus 2 ~~~~l~~~-a~~~p--~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~ 75 (502)
T TIGR01734 2 LIEAIQAF-AETYP--QTIAYRYQ--GQELTYQQLKEQSDRLAAFIQK-RILPKKSPIIVYGHMEPHMLVAFLGSIKSGH 75 (502)
T ss_pred HHHHHHHH-HHHCC--CceEEEcC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHhCC
Confidence 44555555 55555 78999874 6899999999999999999988 8999999999999999999999999999999
Q ss_pred EEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCC
Q 041055 130 ILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDD 209 (526)
Q Consensus 130 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (526)
+++|+++.++.+++.++++..+++.++++.+...... ..+.+.+.. .........+ ... .....+++
T Consensus 76 ~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~-~~~-~~~~~~~~ 142 (502)
T TIGR01734 76 AYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV--GTQIITLSA---------LEQAETSGGP-VSF-DHAVKGDD 142 (502)
T ss_pred EEeCCCCcChHHHHHHHHHhcCCCEEEeccccccccc--CCceEEchH---------hhhhhhhcCC-ccc-cccCCCCC
Confidence 9999999999999999999999999999876433221 122222211 1111111111 001 11345788
Q ss_pred EEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC---C
Q 041055 210 TAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR---F 286 (526)
Q Consensus 210 ~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~ 286 (526)
.++++|||||||.||+|.++|+++...+......+. ...+++++...|++|..++ ..++.++..|+++++.++ .
T Consensus 143 ~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~--~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~ 219 (502)
T TIGR01734 143 NYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFP--LSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKDITN 219 (502)
T ss_pred eEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCC--CCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCHHHhc
Confidence 999999999999999999999999988877666555 6788999999999999988 677889999999998864 5
Q ss_pred CHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccce
Q 041055 287 DLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGA 365 (526)
Q Consensus 287 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~ 365 (526)
++..+++.+++++++.+.++|+++..++.. ......+++++.++++|+++++++.+++.+.++++.+++.||+||++..
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 299 (502)
T TIGR01734 220 NFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVA 299 (502)
T ss_pred CHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEE
Confidence 789999999999999999999999877765 3345678899999999999999999999999989999999999999765
Q ss_pred eecccCccc--ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhccc---CCCCeeec
Q 041055 366 TTFMVSPKQ--ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAF---DEDGWLKT 440 (526)
Q Consensus 366 ~~~~~~~~~--~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~---~~~~~~~T 440 (526)
++....... ......++|.+.++++++|+| +++.++++|+.|||+++|+.++.||+++++.+.+.| +..+||+|
T Consensus 300 ~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~T 378 (502)
T TIGR01734 300 VTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRT 378 (502)
T ss_pred EEEEEccccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEEC
Confidence 543222111 112246799999999999999 457889999999999999999999999999988776 33469999
Q ss_pred cceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeee-CCCCCceEEEEEEeCCCCCCCH----
Q 041055 441 GDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLE-DEEAGQIPMAYVVRAAGSQLTE---- 515 (526)
Q Consensus 441 GD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~-~~~~~~~~~a~vv~~~~~~~~~---- 515 (526)
||+|+++++ ++++.||.+|+||.+|++|+|.+||+++.++|.|.++++++.. ....++.++++|++.+......
T Consensus 379 GDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 457 (502)
T TIGR01734 379 GDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFEKEFQLT 457 (502)
T ss_pred CCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccccchhhH
Confidence 999999976 9999999999999999999999999999999999999999976 4556788999999876533222
Q ss_pred HHHHHHHHhcC
Q 041055 516 DQVMQFVTSQL 526 (526)
Q Consensus 516 ~~l~~~l~~~l 526 (526)
++++++++++|
T Consensus 458 ~~i~~~~~~~l 468 (502)
T TIGR01734 458 KAIKKELKKSL 468 (502)
T ss_pred HHHHHHHhhhC
Confidence 56777777654
No 97
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-59 Score=486.92 Aligned_cols=451 Identities=26% Similarity=0.375 Sum_probs=367.5
Q ss_pred CCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCC
Q 041055 59 PHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSIN 138 (526)
Q Consensus 59 ~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 138 (526)
++..| +++|+++...++.+||.||.+++.++|++|.+ +|+++|++|+++++|+++++++++||+++|++++|+++.+
T Consensus 7 a~~~p--~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~-~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 7 AQTTP--DKPAVIMASTGEVVTYRELDERSNRLAHLFRS-LGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred HhhCC--CceEEEecCCCCEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 34445 78999876567899999999999999999998 9999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CC-CEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEE
Q 041055 139 TESEIVKQVRDSGAKLIISASEELQKLTKV-----NV-PIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAA 212 (526)
Q Consensus 139 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 212 (526)
+.+++.++++.+++++++++......+... .. ..+.............+.+.... .+.. ...+.++.++
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~a~ 158 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG----LPAT-PIADESLGTD 158 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC----CCCC-CCCCcccccE
Confidence 999999999999999999998765443211 11 12233322112222223222211 1111 1223456789
Q ss_pred EEcCCCCCCCchHHHh--hhHHHHHHH---HHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCC
Q 041055 213 ILYSSGTTGTSKGVIL--THANFISIM---QLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFD 287 (526)
Q Consensus 213 i~~TSGTTG~PK~v~~--sh~~l~~~~---~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~ 287 (526)
++|||||||.||+|.+ +|.++.... ......+. +.+.++++...|++|.+++ ...+.++..|+++++.+.++
T Consensus 159 il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~p~~h~~~~-~~~~~~~~~g~~~~~~~~~~ 235 (511)
T PRK13391 159 MLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWG--FRSDMVYLSPAPLYHSAPQ-RAVMLVIRLGGTVIVMEHFD 235 (511)
T ss_pred EEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcC--CCCCCeEEEcCCHHHHHHH-HHHHHHHHcCceEEECCCCC
Confidence 9999999999999985 466553322 22333333 5678999999999999988 55677888999999998899
Q ss_pred HHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccc
Q 041055 288 LQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCG 364 (526)
Q Consensus 288 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~ 364 (526)
+..+++.++++++|++.++|+++..+++.. ....+++++|.+++||+++++++.+++++.+ +..+++.||+||++.
T Consensus 236 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~~~ 314 (511)
T PRK13391 236 AEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEGLG 314 (511)
T ss_pred HHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccccc
Confidence 999999999999999999999999888652 2345688999999999999999999999988 678999999999987
Q ss_pred eeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCC-Ceeeccce
Q 041055 365 ATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDED-GWLKTGDL 443 (526)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~-~~~~TGD~ 443 (526)
++...... ....++++|+|.++ .++++| +++++++.|+.|||+++|+ ++.||+++++.+.+.+..+ +||+|||+
T Consensus 315 ~~~~~~~~--~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~ 389 (511)
T PRK13391 315 FTACDSEE--WLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDI 389 (511)
T ss_pred eEEecCcc--ccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCE
Confidence 65542211 12236899999999 689999 6688899999999999999 8899999999999988655 99999999
Q ss_pred EEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCC---CHHHHHH
Q 041055 444 CYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQL---TEDQVMQ 520 (526)
Q Consensus 444 ~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~---~~~~l~~ 520 (526)
|+++++|.+++.||.||++|++|.+|+|.|||++|.+||.|.+++|++++++..++.+++++++.++... ..+++++
T Consensus 390 g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 469 (511)
T PRK13391 390 GYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAAELIA 469 (511)
T ss_pred EEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999889999999998765432 3478999
Q ss_pred HHHhcC
Q 041055 521 FVTSQL 526 (526)
Q Consensus 521 ~l~~~l 526 (526)
+++++|
T Consensus 470 ~~~~~l 475 (511)
T PRK13391 470 FCRQRL 475 (511)
T ss_pred HHHhhc
Confidence 998865
No 98
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.4e-59 Score=484.92 Aligned_cols=443 Identities=26% Similarity=0.371 Sum_probs=364.7
Q ss_pred eEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHH
Q 041055 68 VALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQV 147 (526)
Q Consensus 68 ~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 147 (526)
.|+++ .++.+||.||.++++++|++|.+ +|+++|++|+++++|+++++++++||+++|++++++++.++.+++.+++
T Consensus 3 ~~~~~--~~~~~Ty~el~~~~~~la~~l~~-~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 79 (509)
T PRK12406 3 ATIIS--GDRRRSFDELAQRAARAAGGLAA-LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYIL 79 (509)
T ss_pred eEEEE--CCeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHH
Confidence 46666 36899999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEcchhHHHhhcC---CCCEEEEcCCC--------------CCCCcchHHHHhhhcCCCCCCCCCCCCCCCE
Q 041055 148 RDSGAKLIISASEELQKLTKV---NVPIIVTSRDQ--------------SNNKSVSVEELIECCDAADELPGCQLTQDDT 210 (526)
Q Consensus 148 ~~~~~~~ii~~~~~~~~~~~~---~~~~i~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (526)
+.+++++++++......+... ....+...... .......+.+..... .+.....++++
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 154 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQ-----EPYDGPPVPQP 154 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhccc-----CccCCCCCCCc
Confidence 999999999987766544321 12222221110 011122233222111 01113356899
Q ss_pred EEEEcCCCCCCCchHHHhhhHHHH---HHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCC
Q 041055 211 AAILYSSGTTGTSKGVILTHANFI---SIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFD 287 (526)
Q Consensus 211 a~i~~TSGTTG~PK~v~~sh~~l~---~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~ 287 (526)
++++|||||||.||+|.++|.+.. .........++ ..++++++..+|++|..+. ...+.++..|+++++.+.++
T Consensus 155 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~~~ 231 (509)
T PRK12406 155 QSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYG--LKPGIRALLTGPLYHSAPN-AYGLRAGRLGGVLVLQPRFD 231 (509)
T ss_pred eEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcC--CCCCceEEEEeCCcccchH-HHHHHHHhhheEEEEccCCC
Confidence 999999999999999998765543 33333333444 6788999999999998877 33445677899999988889
Q ss_pred HHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccc
Q 041055 288 LQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCG 364 (526)
Q Consensus 288 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~ 364 (526)
++.+++.++++++|.+.++|+++..|++.. ....+++++|.+++||+++++++.+++.+.+ ++.+++.||+||++.
T Consensus 232 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~ 310 (509)
T PRK12406 232 PEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGA 310 (509)
T ss_pred HHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCc
Confidence 999999999999999999999999998752 2345688999999999999999999999988 688999999999987
Q ss_pred eeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEecccccc-ccCCCHHHHhcccCCCCeeeccce
Q 041055 365 ATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMR-GYFGNEEATAAAFDEDGWLKTGDL 443 (526)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~-gy~~~~~~t~~~~~~~~~~~TGD~ 443 (526)
+++..... ....++++|++.+++.++++| +++++++.|+.|||+++|++++. +|+++++.+...+ .++||+|||+
T Consensus 311 ~~~~~~~~--~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~ 386 (509)
T PRK12406 311 VTFATSED--ALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDV 386 (509)
T ss_pred eEecCccc--ccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccE
Confidence 66543221 122368999999999999999 56789999999999999998875 9999999887766 6899999999
Q ss_pred EEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHH
Q 041055 444 CYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVT 523 (526)
Q Consensus 444 ~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~ 523 (526)
++++++|.+++.||.||+||++|.+|+|.+||++|.++|.|.+++|++.++...++.++++|++.++...+.++++++++
T Consensus 387 ~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~ 466 (509)
T PRK12406 387 GYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLK 466 (509)
T ss_pred EEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988889999999998776678899999998
Q ss_pred hcC
Q 041055 524 SQL 526 (526)
Q Consensus 524 ~~l 526 (526)
++|
T Consensus 467 ~~l 469 (509)
T PRK12406 467 ARL 469 (509)
T ss_pred Hhc
Confidence 764
No 99
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-61 Score=454.80 Aligned_cols=424 Identities=28% Similarity=0.407 Sum_probs=351.6
Q ss_pred CceeCHHHHHHHHHHHHHHHHHhcCCCCCCE-EEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 76 HERVTYAQLHRSIRSLASGLYHALGVRKGDV-VFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 76 ~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~-V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
..++||.|+..++.++|++|.+ +|++++++ ++|+++.+.+|.++++||++.+..+|.+..++..+.+.|-|++++++.
T Consensus 87 Y~w~sy~ev~~~~~~~gsGL~~-lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~ 165 (678)
T KOG1180|consen 87 YKWMSYNEVYERVHNFGSGLVK-LGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTA 165 (678)
T ss_pred eeeecHHHHHHHHHHHHHHHHH-hCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceE
Confidence 4689999999999999999998 99997776 999999999999999999999999999999999999999999999999
Q ss_pred EEEcchhHHHhhc-----CCCC-EEEEcCCC-------------CCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEc
Q 041055 155 IISASEELQKLTK-----VNVP-IIVTSRDQ-------------SNNKSVSVEELIECCDAADELPGCQLTQDDTAAILY 215 (526)
Q Consensus 155 ii~~~~~~~~~~~-----~~~~-~i~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 215 (526)
+||+.+.++.+.. ..++ +|.++..+ ......++.+++..+.... .+..++.|+|+|+|||
T Consensus 166 i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~-~~~~~P~p~Dia~IMY 244 (678)
T KOG1180|consen 166 IFTDSELLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE-IPPHPPKPSDIACIMY 244 (678)
T ss_pred EEeCHHHHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC-CCCCCCCCCceEEEEE
Confidence 9999998887652 1333 34444210 1123445666655444422 3333558899999999
Q ss_pred CCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHH------
Q 041055 216 SSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQ------ 289 (526)
Q Consensus 216 TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~------ 289 (526)
||||||.||||+++|+|+++.+........ .+.+.|+++.++|+.|++.+ .+-+.++..|+.+-..+..+..
T Consensus 245 TSGSTG~PKGVml~H~NiVA~~~G~~~~v~-~lg~~D~yi~yLPLAHIlEl-~aE~~~ft~G~~iGY~S~~TLtdts~ki 322 (678)
T KOG1180|consen 245 TSGSTGLPKGVMLTHSNIVAGVTGVGENVP-ELGPKDRYIAYLPLAHILEL-TAELVCFTWGGRIGYSSPLTLTDTSSKI 322 (678)
T ss_pred cCCCCCCCceEEEecccHHhhhhhhcccCc-ccCCCceEEEechHHHHHHH-HHHHHHHhhCCEeecCCcceecccchhh
Confidence 999999999999999999998888766654 47899999999999999999 5566788888888766432221
Q ss_pred --HHHHHHHhcCccEeecccHHHHHHHhhcc-C-----------------------CCC-------------------CC
Q 041055 290 --AMIEAIKTYQVNNIPLVPPVILGLVKYCK-D-----------------------SSY-------------------LT 324 (526)
Q Consensus 290 --~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~-----------------------~~~-------------------l~ 324 (526)
.---.+...|||.+.++|.++.+..+.-. + ... -.
T Consensus 323 ~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG 402 (678)
T KOG1180|consen 323 KKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGG 402 (678)
T ss_pred ccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCC
Confidence 12234567899999999999887654300 0 000 14
Q ss_pred CceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCC
Q 041055 325 SLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPP 404 (526)
Q Consensus 325 ~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~ 404 (526)
+||.+++||+|++++.++++.-.+ .+++.++||.||+++..+...+. +.. .+.+|.|++-++++++|.+++...+.
T Consensus 403 ~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~-d~~--~g~vG~pl~c~eiKLvdw~EgGY~~~ 478 (678)
T KOG1180|consen 403 NLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPE-DFS--TGRVGAPLPCCEIKLVDWEEGGYFAK 478 (678)
T ss_pred ceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChh-hcc--cccccCCccceEEEEEEhhhcCccCC
Confidence 799999999999999999998888 67999999999998876654332 222 78999999999999999988877776
Q ss_pred CC--cceEEEeccccccccCCCHHHHhcccCC-CC--eeeccceEEEcCCCcEEEEccccceEEe-cCeeeChHHHHHHH
Q 041055 405 YQ--RGELWLKSPTIMRGYFGNEEATAAAFDE-DG--WLKTGDLCYFDGEGFLYIVDRIKELIKH-NGYQVAPAELEAVL 478 (526)
Q Consensus 405 g~--~Gel~v~~~~~~~gy~~~~~~t~~~~~~-~~--~~~TGD~~~~~~~G~l~~~GR~~d~ik~-~G~~v~~~eIE~~l 478 (526)
+. .|||||+|++++.||++|++.|++.|.. +| ||+|||+|++.+||+|.|++|++|++|. +|++|+++.||.++
T Consensus 479 ~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l 558 (678)
T KOG1180|consen 479 NKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAAL 558 (678)
T ss_pred CCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHH
Confidence 66 8999999999999999999999999977 88 9999999999999999999999999996 89999999999999
Q ss_pred hcCCCcccEEEEeeeCCCCCceEEEEEEeCCC
Q 041055 479 LSHPNILDAAVIPLEDEEAGQIPMAYVVRAAG 510 (526)
Q Consensus 479 ~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~ 510 (526)
+..|.|...||.+.... ..++++||+.++
T Consensus 559 ~s~p~V~NICvyAd~~~---s~~VaiVVPn~~ 587 (678)
T KOG1180|consen 559 RSSPYVDNICVYADSNK---SKPVAIVVPNQK 587 (678)
T ss_pred hcCcchhheEEeccccc---ceeEEEEcCCch
Confidence 99999999999986554 679999998865
No 100
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3.7e-60 Score=481.64 Aligned_cols=394 Identities=21% Similarity=0.275 Sum_probs=327.8
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGV-RKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
-+.|+||.+++.++|++|.+ +|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~-~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQ-LATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred ecChHHHHHHHHHHHHHHHH-hcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 47899999999999999998 888 5799999999999999999999999999999999999999999999999999999
Q ss_pred EcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHH
Q 041055 157 SASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISI 236 (526)
Q Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~ 236 (526)
++.+..... . . . . . ...+ ...++++++++|||||||.||+|++||+++...
T Consensus 98 ~~~~~~~~~---------~-~---~------------~-~-~~~~--~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~ 148 (452)
T PRK07445 98 GLDQLKLSH---------P-P---P------------L-P-SQGI--LPNLETGWIMIPTGGSSGQIRFAIHTWETLTAS 148 (452)
T ss_pred ecCcccccc---------C-C---C------------C-C-cccc--CCCCCCcEEEEeCCCCCCCCcEEEechHHHHHH
Confidence 876422100 0 0 0 0 0 0001 235688999999999999999999999999887
Q ss_pred HHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhh
Q 041055 237 MQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY 316 (526)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 316 (526)
+......+. ..+ ++.++.+|++|.+|+ ..++.++..|+++++.+............+++++++.++|+++..+++.
T Consensus 149 ~~~~~~~~~--~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~ 224 (452)
T PRK07445 149 VQGFQRYFQ--LQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQL 224 (452)
T ss_pred HHHHHHHhc--CCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhh
Confidence 777666554 333 467889999999998 6677889999999988643333333444578899999999999999863
Q ss_pred ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeC
Q 041055 317 CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDT 396 (526)
Q Consensus 317 ~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~ 396 (526)
....++++|.+++||+++++++.+.+.+ + ++++++.||+||++..+....+. ......+++|+|.|+++++|+
T Consensus 225 --~~~~l~~l~~i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~-~~~~~~~~~G~~~p~~~v~i~-- 297 (452)
T PRK07445 225 --RPQWLAQFRTILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPD-DFLAGNNSSGQVLPHAQITIP-- 297 (452)
T ss_pred --ChhhhhcceEEEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCch-hhccCCCcCCccCCCCeEEEc--
Confidence 2345789999999999999999998876 3 78999999999997654432221 111226789999999999998
Q ss_pred CCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHH
Q 041055 397 ETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEA 476 (526)
Q Consensus 397 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~ 476 (526)
.|+.|||+|+||+++.||++++. ..++||+|||+|++|+||++++.||.||+||++|++|+|.|||+
T Consensus 298 -------~g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~ 364 (452)
T PRK07445 298 -------ANQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEA 364 (452)
T ss_pred -------CCCcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHH
Confidence 45679999999999999998532 35799999999999999999999999999999999999999999
Q ss_pred HHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 477 VLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 477 ~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+|.+||.|.+|+|++.+++..|+.++|+|+..++ ..+.++++++++++|
T Consensus 365 ~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~-~~~~~~l~~~~~~~L 413 (452)
T PRK07445 365 AILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDP-SISLEELKTAIKDQL 413 (452)
T ss_pred HHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCC-CCCHHHHHHHHHHhC
Confidence 9999999999999999999889999999998766 456789999999875
No 101
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-59 Score=484.68 Aligned_cols=440 Identities=29% Similarity=0.436 Sum_probs=363.0
Q ss_pred CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCe
Q 041055 74 ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAK 153 (526)
Q Consensus 74 ~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 153 (526)
..++.+||.||.+++.++|++|.+ +|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++
T Consensus 7 ~~~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~ 85 (502)
T PRK08276 7 PSGEVVTYGELEARSNRLAHGLRA-LGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAK 85 (502)
T ss_pred CCCcEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCC
Confidence 468899999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcchhHHHhhcC------CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHH
Q 041055 154 LIISASEELQKLTKV------NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVI 227 (526)
Q Consensus 154 ~ii~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~ 227 (526)
+++++......+... ....+.+... .......+.+..... . ..+ ....++.++++|||||||.||+|.
T Consensus 86 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~--~~~--~~~~~~~a~i~~TSGtTG~PK~v~ 159 (502)
T PRK08276 86 VLIVSAALADTAAELAAELPAGVPLLLVVAG-PVPGFRSYEEALAAQ-P--DTP--IADETAGADMLYSSGTTGRPKGIK 159 (502)
T ss_pred EEEEccchhhHHHHHhhhccccccEEEEeCC-CCCccccHHHHHhcC-C--CCC--CCCCCcceEEEECCCCCCCCceEE
Confidence 999988765544321 2333333321 112223333332211 1 111 234567899999999999999999
Q ss_pred hhhHHHHHHHH--HHhh--hhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEe
Q 041055 228 LTHANFISIMQ--LLRW--TVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 228 ~sh~~l~~~~~--~~~~--~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~ 303 (526)
++|.++..... .... .........+++++..|++|.+++ ...+.++..|+++++.+.+++..+++.++++++|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~ 238 (502)
T PRK08276 160 RPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPL-RFGMSALALGGTVVVMEKFDAEEALALIERYRVTHS 238 (502)
T ss_pred EccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHH-HHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEE
Confidence 88876543221 1111 111112467899999999999998 444578889999999988999999999999999999
Q ss_pred ecccHHHHHHHhhc---cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCC
Q 041055 304 PLVPPVILGLVKYC---KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSG 380 (526)
Q Consensus 304 ~~~P~~~~~l~~~~---~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~ 380 (526)
.++|+++..+++.. ....+++++|.+++||+++++++.+++++.+ +..+++.||+||++.++...... .....+
T Consensus 239 ~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~--~~~~~~ 315 (502)
T PRK08276 239 QLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITSED--WLAHPG 315 (502)
T ss_pred EehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecCcc--ccccCC
Confidence 99999999998763 2345689999999999999999999999998 67899999999998755543221 122367
Q ss_pred cccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccc
Q 041055 381 SCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKE 460 (526)
Q Consensus 381 ~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d 460 (526)
++|+|+ ++.++++| +++.+++.|+.|||+++|+.++.||+++++.+.+.+.+++||+|||+++++++|.+++.||.|+
T Consensus 316 ~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~ 393 (502)
T PRK08276 316 SVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSD 393 (502)
T ss_pred Ccceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcc
Confidence 899999 88999999 5678999999999999999999999999999999998889999999999999999999999999
Q ss_pred eEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhcC
Q 041055 461 LIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE---DQVMQFVTSQL 526 (526)
Q Consensus 461 ~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~---~~l~~~l~~~l 526 (526)
++|++|.+|+|.+||.+|.++|.|.+++|++..++..++.++++|+++++...++ ++++++++++|
T Consensus 394 ~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l 462 (502)
T PRK08276 394 MIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRL 462 (502)
T ss_pred eEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999888999999999987654443 37888888764
No 102
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.7e-59 Score=485.97 Aligned_cols=466 Identities=26% Similarity=0.345 Sum_probs=369.5
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.+..+.+... ++..+ +++|+++. +..+||+||.+++.++|.+|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 18 ~~~~~~~~~~-~~~~~--~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 91 (545)
T PRK08162 18 LTPLSFLERA-AEVYP--DRPAVIHG--DRRRTWAETYARCRRLASALAR-RGIGRGDTVAVLLPNIPAMVEAHFGVPMA 91 (545)
T ss_pred CCHHHHHHHH-HHHCC--CCeEEEEC--CeEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 4666777666 55666 79999884 5789999999999999999998 89999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhc----CCCC-EEEEcCCCCC------CCcchHHHHhhhcCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTK----VNVP-IIVTSRDQSN------NKSVSVEELIECCDA 196 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~----~~~~-~i~~~~~~~~------~~~~~~~~~~~~~~~ 196 (526)
|++++|+++.++.+++.++++.++++.++++.+....+.. ...+ .+.+...... ....++.++.....+
T Consensus 92 G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (545)
T PRK08162 92 GAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP 171 (545)
T ss_pred CcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc
Confidence 9999999999999999999999999999999877655432 1111 2333221100 112233333322111
Q ss_pred CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhccc
Q 041055 197 ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCC 276 (526)
Q Consensus 197 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~ 276 (526)
... .....+.+++++++|||||||.||+|+++|+++..........+. +..++++++.+|++|.+++....+..+ .
T Consensus 172 ~~~-~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~--~~~~~~~l~~~pl~h~~~~~~~~~~~~-~ 247 (545)
T PRK08162 172 DFA-WTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWG--MPKHPVYLWTLPMFHCNGWCFPWTVAA-R 247 (545)
T ss_pred ccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcC--CCCCCeeEeccCcHhhhhHHHHHHHHH-H
Confidence 111 111234457899999999999999999999987665544444444 567889999999999999855444444 4
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhcc-CCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCK-DSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+..++...+++..+++.++++++|++.++|+++..|++... ....+.+.+.++++|+++++++.+.+++. ++++++
T Consensus 248 ~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~ 325 (545)
T PRK08162 248 AGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTH 325 (545)
T ss_pred ccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceee
Confidence 555556677899999999999999999999999999987632 23345567778899999999999998775 789999
Q ss_pred ccccccccceeecccCcccc--------cCCCCcccccCC-CcEEEEEeCCCCccCCC-C-CcceEEEeccccccccCCC
Q 041055 356 GYGLTESCGATTFMVSPKQA--------RARSGSCGALSP-TFYAKVVDTETRLALPP-Y-QRGELWLKSPTIMRGYFGN 424 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~--------~~~~~~~G~~~~-~~~~~ivd~~~~~~~~~-g-~~Gel~v~~~~~~~gy~~~ 424 (526)
.||+||+++.+..+...... ....++.|.+.+ +..++|+|++++.+++. | +.|||+++|+.++.||+++
T Consensus 326 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~ 405 (545)
T PRK08162 326 VYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKN 405 (545)
T ss_pred cccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCC
Confidence 99999986555443211100 011345666655 34578899778888876 3 4699999999999999999
Q ss_pred HHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEE
Q 041055 425 EEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAY 504 (526)
Q Consensus 425 ~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~ 504 (526)
++.+...| .+|||+|||+|++|+||.++++||.||++|++|.+|+|.+||++|.++|.|.+++|++.+++..++.++++
T Consensus 406 ~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~ 484 (545)
T PRK08162 406 PKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAF 484 (545)
T ss_pred hhhhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEE
Confidence 99999998 57899999999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcC
Q 041055 505 VVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 505 vv~~~~~~~~~~~l~~~l~~~l 526 (526)
|++.++...+.++++++++++|
T Consensus 485 v~~~~~~~~~~~~l~~~~~~~l 506 (545)
T PRK08162 485 VELKDGASATEEEIIAHCREHL 506 (545)
T ss_pred EEeCCCCCCCHHHHHHHHHHhc
Confidence 9998887778889999998765
No 103
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-59 Score=513.61 Aligned_cols=455 Identities=19% Similarity=0.205 Sum_probs=355.4
Q ss_pred CCCCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 45 RTDLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
...+++.+.+... ++..| +++|+++. ++.+||+||.++++++|++|.+ +|+++||+|+|+++|+++++++++||
T Consensus 444 ~~~~sl~~ll~~~-a~~~p--d~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~-~Gv~~Gd~VaI~~~n~~e~v~a~lA~ 517 (994)
T PRK07868 444 HTRISLGRIIAEQ-ARDAP--KGEFLLFD--GRVHTYEAVNRRINNVVRGLIA-VGVRQGDRVGVLMETRPSALVAIAAL 517 (994)
T ss_pred CCCccHHHHHHHH-HHHCC--CCeEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3447888888777 66677 79999973 6799999999999999999998 99999999999999999999999999
Q ss_pred HHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCC----CCcchHHHHhhhcCCCCCC
Q 041055 125 FSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSN----NKSVSVEELIECCDAADEL 200 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 200 (526)
+++|++++|++|. +++.+++++++++++|++.+....+.....++++++..... .......+...........
T Consensus 518 ~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (994)
T PRK07868 518 SRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVEL 594 (994)
T ss_pred HhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhcCcccccC
Confidence 9999999999985 68999999999999999987766654444445555421100 0000011110000000000
Q ss_pred C----CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhccc
Q 041055 201 P----GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCC 276 (526)
Q Consensus 201 ~----~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~ 276 (526)
+ .....++++++|+|| ||||.||++.++|.+...........+. +.++|++++.+|++|.+++...++.++..
T Consensus 595 ~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~--l~~~d~~L~~~Pl~h~~gl~~~l~~~l~g 671 (994)
T PRK07868 595 PGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAA--LDRRDTVYCLTPLHHESGLLVSLGGAVVG 671 (994)
T ss_pred CcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcC--CCCCCeEEEecChHHHhHHHHHHHHHhcc
Confidence 1 012236889999998 5777777777777665544333333334 67899999999999999996666677777
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+++++.+.++++.+++.|+++++|+++++|+++..|++.. ....+++++|.++ |+.+++++.+++.+.++++.+++
T Consensus 672 G~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~ 749 (994)
T PRK07868 672 GSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVE 749 (994)
T ss_pred ceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheee
Confidence 88888888899999999999999999999999999998762 2345677899876 34499999999999997789999
Q ss_pred ccccccccceeecccCcccccCCCCcccccCCCc-EEEEE--e--------CCCC--ccCCCCCcceEEEeccccccccC
Q 041055 356 GYGLTESCGATTFMVSPKQARARSGSCGALSPTF-YAKVV--D--------TETR--LALPPYQRGELWLKSPTIMRGYF 422 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~iv--d--------~~~~--~~~~~g~~Gel~v~~~~~~~gy~ 422 (526)
.||+||++..... .. ...++++|+|+||+ +++|. | .++| +.++.|+.|||+++++.. +
T Consensus 750 ~YG~TE~~~~~~~-~~----~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~ 820 (994)
T PRK07868 750 FFATTDGQAVLAN-VS----GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I 820 (994)
T ss_pred eeecccccccccc-cC----CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C
Confidence 9999998654332 11 12368999999997 66653 2 1344 568899999999999753 3
Q ss_pred CCHHHHh--cccC-CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCc
Q 041055 423 GNEEATA--AAFD-EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQ 499 (526)
Q Consensus 423 ~~~~~t~--~~~~-~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~ 499 (526)
||+.+. ..|. .+|||+|||+|++|+||+|+|+||.||+||++|.+|+|.|||++|.+||.|.+|+|++++++. ++
T Consensus 821 -~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~ 898 (994)
T PRK07868 821 -DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQ 898 (994)
T ss_pred -ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-Cc
Confidence 454432 3353 489999999999999999999999999999999999999999999999999999999998875 68
Q ss_pred eEEEEEEeCCCCCCCHHHHHHHHHh
Q 041055 500 IPMAYVVRAAGSQLTEDQVMQFVTS 524 (526)
Q Consensus 500 ~~~a~vv~~~~~~~~~~~l~~~l~~ 524 (526)
.++|+|+++++...++++|+++|++
T Consensus 899 ~~~a~Vv~~~~~~~~~~~L~~~l~~ 923 (994)
T PRK07868 899 LAVAAVTLRPGAAITAADLTEALAS 923 (994)
T ss_pred eEEEEEEeCCCCcCCHHHHHHHHHh
Confidence 8999999998888889999999974
No 104
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-59 Score=494.22 Aligned_cols=456 Identities=21% Similarity=0.306 Sum_probs=361.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCC--CceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSAT--HERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIF 125 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~ 125 (526)
-++.+.+... ++..+ ..++++... .+.+||.||.+++.++|.+|.+ +|+++||+|+++++|+++|+++++||+
T Consensus 21 ~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~~ 95 (579)
T PRK09192 21 PTLVEALDYA-ALGEA---GMNFYDRRGQLEEALPYQTLRARAEAGARRLLA-LGLKPGDRVALIAETDGDFVEAFFACQ 95 (579)
T ss_pred hhHHHHHHHh-hccCC---ceEEEecCCCEEEEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCchhHHHHHHHHH
Confidence 4677877766 55554 556666432 2679999999999999999998 999999999999999999999999999
Q ss_pred HcCCEEccCCCCCC-------HHHHHHHHHhcCCeEEEEcchhHHHhhcC--CCCEEEEcCCCCCCCcchHHHHhhhcCC
Q 041055 126 SLGAILSPANSINT-------ESEIVKQVRDSGAKLIISASEELQKLTKV--NVPIIVTSRDQSNNKSVSVEELIECCDA 196 (526)
Q Consensus 126 ~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 196 (526)
++|++++|+++..+ .+++.++++.+++++++++....+.+... ..+.+.+ ..+.++.....
T Consensus 96 ~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~- 165 (579)
T PRK09192 96 YAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHV---------LSHAWFKALPE- 165 (579)
T ss_pred HcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccce---------eehhhhcccCC-
Confidence 99999999986443 68999999999999999998766554431 1111110 11111111111
Q ss_pred CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhh-hhcccCCCCcEEEEeCChhHHHHHHHHHHhhcc
Q 041055 197 ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRW-TVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFC 275 (526)
Q Consensus 197 ~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~-~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~ 275 (526)
.........++++++++|||||||.||+|.++|+++...+..... .++ ..++|+++..+|++|.+|+...++.++.
T Consensus 166 -~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~--~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 242 (579)
T PRK09192 166 -ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLK--VRPGDRCVSWLPFYHDMGLVGFLLTPVA 242 (579)
T ss_pred -CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhccc--CCCCCeEEEeCCCCCcchhHHHHHHHHH
Confidence 111112346789999999999999999999999999988776665 555 6789999999999999999767778888
Q ss_pred cCcEEEEecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhhc----cCCCCCCCceEEEEecCCCCHHHHHHHHHh
Q 041055 276 CGVTIVVMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC----KDSSYLTSLRRVGSGAAPLSKELADEFRAK 347 (526)
Q Consensus 276 ~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~ 347 (526)
.|+++++.+. .++..+++.+.++++++++..|..+..+.... ....+++++|.+++||+++++++.+.+.+.
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~ 322 (579)
T PRK09192 243 TQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEA 322 (579)
T ss_pred hCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHH
Confidence 8998877652 36889999999999987776444444433221 223578899999999999999999999998
Q ss_pred CCC-----CceeeccccccccceeecccCcccc-------------------------cCCCCcccccCCCcEEEEEeCC
Q 041055 348 FPW-----VELRQGYGLTESCGATTFMVSPKQA-------------------------RARSGSCGALSPTFYAKVVDTE 397 (526)
Q Consensus 348 ~~~-----~~l~~~yG~tE~~~~~~~~~~~~~~-------------------------~~~~~~~G~~~~~~~~~ivd~~ 397 (526)
++. ..+++.||+||++..++........ ....+++|++.|+++++|+| +
T Consensus 323 ~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~ 401 (579)
T PRK09192 323 FAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-E 401 (579)
T ss_pred HHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-C
Confidence 742 3589999999998765543211000 00125789999999999999 5
Q ss_pred CCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHH
Q 041055 398 TRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAV 477 (526)
Q Consensus 398 ~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~ 477 (526)
++..++.|+.|||+++|+++++||+++ +.+.+.+..++||+|||+|++ ++|+++++||.||+||++|++|+|.|||++
T Consensus 402 ~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~ 479 (579)
T PRK09192 402 AGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWI 479 (579)
T ss_pred CCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHH
Confidence 678899999999999999999999999 677788888999999999999 899999999999999999999999999999
Q ss_pred HhcCCCcc--cEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhc
Q 041055 478 LLSHPNIL--DAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQ 525 (526)
Q Consensus 478 l~~~~~v~--~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~ 525 (526)
|.+||+|. +|+|++++++. ++.++++|+..++...+.++++++++++
T Consensus 480 l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~ 528 (579)
T PRK09192 480 AEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAAL 528 (579)
T ss_pred HHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHHH
Confidence 99999998 89999999875 5688999888776666667888887764
No 105
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.3e-59 Score=579.12 Aligned_cols=453 Identities=26% Similarity=0.374 Sum_probs=385.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++++.+..+ ++..| +++|+++. ++.+||+||.+++.++|+.|.+ +|+++|++|++++++++++++++|||+++
T Consensus 1131 ~~l~~~~~~~-a~~~p--~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~s~~~iv~~lailka 1204 (4334)
T PRK05691 1131 AWLPELLNEQ-ARQTP--ERIALVWD--GGSLDYAELHAQANRLAHYLRD-KGVGPDVCVAIAAERSPQLLVGLLAILKA 1204 (4334)
T ss_pred CCHHHHHHHH-HHhCC--CCeEEEEC--CceEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 4577877776 66667 79999974 6789999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLT 206 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (526)
|++++|++|.++.+++.+++++++++++|++......+... ....+.++... .. ... ...+.....
T Consensus 1205 G~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----~~~-~~~~~~~~~ 1271 (4334)
T PRK05691 1205 GGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSLH-------LD-----SWP-SQAPGLHLH 1271 (4334)
T ss_pred CCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeecccc-------cc-----ccC-CCCCCCCCC
Confidence 99999999999999999999999999999998765554322 11122221110 00 000 111112346
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec--
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-- 284 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-- 284 (526)
++++++++|||||||.||||+++|+++.+.+.+....+. +.++++++...|++|..++ ..++.++..|+++++.+
T Consensus 1272 ~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~fd~s~-~~~~~~L~~G~~l~i~~~~ 1348 (4334)
T PRK05691 1272 GDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYA--LDDSDVLMQKAPISFDVSV-WECFWPLITGCRLVLAGPG 1348 (4334)
T ss_pred CCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcC--CCCCCEEEEeCCccHHHHH-HHHHHHHhCCCEEEEcCcc
Confidence 789999999999999999999999999998888777666 6789999999999988887 67889999999999975
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESC 363 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~ 363 (526)
..++..+++.++++++|++.++|+++..+.+... ...++++|.+++||+++++++.++|.+.+|++++++.||+||++
T Consensus 1349 ~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~-~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 1427 (4334)
T PRK05691 1349 EHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL-AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETA 1427 (4334)
T ss_pred ccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc-cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChhe
Confidence 4689999999999999999999999999886522 34678999999999999999999999999899999999999998
Q ss_pred ceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC-------CC
Q 041055 364 GATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE-------DG 436 (526)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~-------~~ 436 (526)
..++....... .....++|+|++++.++|+| +.++++|.|+.|||+|+|+++++||+++|+.|.++|.. .+
T Consensus 1428 ~~~~~~~~~~~-~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r 1505 (4334)
T PRK05691 1428 INVTHWQCQAE-DGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGAR 1505 (4334)
T ss_pred eeeeeeecccc-cCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCce
Confidence 76654322111 12267899999999999999 56889999999999999999999999999999999843 35
Q ss_pred eeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHH
Q 041055 437 WLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTED 516 (526)
Q Consensus 437 ~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~ 516 (526)
||+|||+|++++||.++++||+|++||++|++|+|.|||++|.+||+|.+|+|++..+. .++.++++++..++...+.+
T Consensus 1506 ~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~-~~~~lva~~~~~~~~~~~~~ 1584 (4334)
T PRK05691 1506 LYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREGA-AGAQLVGYYTGEAGQEAEAE 1584 (4334)
T ss_pred EEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeCC-CCCEEEEEEEeCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999976554 56889999998887777788
Q ss_pred HHHHHHHhcC
Q 041055 517 QVMQFVTSQL 526 (526)
Q Consensus 517 ~l~~~l~~~l 526 (526)
+++++|+++|
T Consensus 1585 ~l~~~l~~~L 1594 (4334)
T PRK05691 1585 RLKAALAAEL 1594 (4334)
T ss_pred HHHHHHHHhC
Confidence 9999999875
No 106
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.6e-59 Score=484.83 Aligned_cols=408 Identities=16% Similarity=0.175 Sum_probs=318.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh---------HHHhhc-CCCCEEEEcCCCC
Q 041055 111 APNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEE---------LQKLTK-VNVPIIVTSRDQS 180 (526)
Q Consensus 111 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~-~~~~~i~~~~~~~ 180 (526)
++|++|+++++|||+++|++++|+++.++.+++.+++++++++++|+++.. ...+.. .....+++.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 111111 1122333321100
Q ss_pred ------CCCcchHHHHhhhcCC-----CCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCC
Q 041055 181 ------NNKSVSVEELIECCDA-----ADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHA 249 (526)
Q Consensus 181 ------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~ 249 (526)
......+.++...... ..........++++++|+|||||||.||||++||++++.........++ +.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~--~~ 158 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMD--IQ 158 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcC--CC
Confidence 0112234444321110 0011111235689999999999999999999999998776554444444 67
Q ss_pred CCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCC
Q 041055 250 QNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTS 325 (526)
Q Consensus 250 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~ 325 (526)
++|++++.+|++|.+++ ..++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..|++.. ....++++
T Consensus 159 ~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~ 237 (499)
T PLN03051 159 PGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSK 237 (499)
T ss_pred CCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchh
Confidence 88999999999999997 56788899999999887 478899999999999999999999999988753 23457889
Q ss_pred ceEEEEecCCCCHHHHHHHHHhCC-CCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCC
Q 041055 326 LRRVGSGAAPLSKELADEFRAKFP-WVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPP 404 (526)
Q Consensus 326 lr~v~~gG~~l~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~ 404 (526)
||.+++||+++++++.+++++.++ ++.+++.||+||++..+...... . ....+++|+|.++++++|+| +++++++.
T Consensus 238 Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~-~-~~~~~~~G~p~~~~~~~ivd-~~g~~~~~ 314 (499)
T PLN03051 238 LRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL-Q-PQAPGAFSTASLGTRFVLLN-DNGVPYPD 314 (499)
T ss_pred heEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc-C-CCCCccccCCCCCceEEEEC-CCCCCCCC
Confidence 999999999999999988877432 37899999999987543322211 1 12367899999999999999 56888998
Q ss_pred C--CcceEEEecccc--ccccCCCHHHHhcccCC--------CCeeeccceEEEcCCCcEEEEccccceEEecCeeeChH
Q 041055 405 Y--QRGELWLKSPTI--MRGYFGNEEATAAAFDE--------DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPA 472 (526)
Q Consensus 405 g--~~Gel~v~~~~~--~~gy~~~~~~t~~~~~~--------~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~ 472 (526)
| +.|||+++||.+ +.|||+++ .+...++. .+||+|||+|++|+||+|+++||.||+||++|++|+|.
T Consensus 315 g~~~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~ 393 (499)
T PLN03051 315 DQPCVGEVALAPPMLGASDRLLNAD-HDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSV 393 (499)
T ss_pred CCCcceEEEEecCcCCCCccccCCc-ccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHH
Confidence 8 479999999976 57999765 33322321 12789999999999999999999999999999999999
Q ss_pred HHHHHHhc-CCCcccEEEEeeeCCCCC-ceEEEEE---EeCCCC-CCCHHHHHHHHHhc
Q 041055 473 ELEAVLLS-HPNILDAAVIPLEDEEAG-QIPMAYV---VRAAGS-QLTEDQVMQFVTSQ 525 (526)
Q Consensus 473 eIE~~l~~-~~~v~~~~vv~~~~~~~~-~~~~a~v---v~~~~~-~~~~~~l~~~l~~~ 525 (526)
|||++|.+ ||.|.+|+|++++++..| +.++||| +++++. ..+.++++++|+++
T Consensus 394 EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~ 452 (499)
T PLN03051 394 EIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEA 452 (499)
T ss_pred HHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHH
Confidence 99999996 999999999999999888 7899999 888775 46778888887653
No 107
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.7e-58 Score=479.66 Aligned_cols=455 Identities=22% Similarity=0.296 Sum_probs=373.1
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
+|+.+.+.+. +...| +++++++. ++.+||+||.+++.++|.+|.+ +|+++|++|+++++|+.+++++++||+++
T Consensus 2 ~~~~~~l~~~-a~~~p--~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~-~g~~~~~~v~~~~~~~~~~~~~~~a~~~~ 75 (503)
T PRK04813 2 MDIIETIEEF-AQTQP--DFPAYDYL--GEKLTYGQLKEDSDALAAFIDS-LKLPDKSPIIVFGHMSPEMLATFLGAVKA 75 (503)
T ss_pred chHHHHHHHH-HHhCC--CceEEEeC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 3566767666 55556 78998874 6789999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQ 207 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (526)
|++++|+++.++.+++.++++.+++++++++.... ......+.+... .+.+..... . .........+
T Consensus 76 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~-~-~~~~~~~~~~ 142 (503)
T PRK04813 76 GHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELP--LEILGIPVITLD---------ELKDIFATG-N-PYDFDHAVKG 142 (503)
T ss_pred CCEEecCCCCChHHHHHHHHHhcCCCEEEeccccc--ccccCCcEEehH---------Hhhhhhhcc-c-cccccccCCC
Confidence 99999999999999999999999999999987641 111112222111 111111000 0 1111113467
Q ss_pred CCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC--
Q 041055 208 DDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR-- 285 (526)
Q Consensus 208 ~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-- 285 (526)
+++++++|||||||.||+|.++|+++..........+. ...+++++...|++|..++ ..++.++..|+++++.+.
T Consensus 143 ~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~~~ 219 (503)
T PRK04813 143 DDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFA--LPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPKDM 219 (503)
T ss_pred CCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcC--CCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEcChhh
Confidence 88999999999999999999999999988777666655 6788999999999999887 667788999999998864
Q ss_pred -CCHHHHHHHHHhcCccEeecccHHHHHHHhh-ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccc
Q 041055 286 -FDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESC 363 (526)
Q Consensus 286 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~ 363 (526)
.++..+++.+++++++.+..+|+++..+... ......++++|.++++|+++++.+.+++.+.++++.+++.||+||++
T Consensus 220 ~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~ 299 (503)
T PRK04813 220 TANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEAT 299 (503)
T ss_pred hcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchhe
Confidence 5789999999999999999999999887655 33456688999999999999999999999999889999999999997
Q ss_pred ceeecccCccc--ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhccc---CCCCee
Q 041055 364 GATTFMVSPKQ--ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAF---DEDGWL 438 (526)
Q Consensus 364 ~~~~~~~~~~~--~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~---~~~~~~ 438 (526)
..++....... ......++|++.++++++|+| +++.+++.|+.|||+++|+.++.||+++++.+.+.| +..+||
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~ 378 (503)
T PRK04813 300 VAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAY 378 (503)
T ss_pred eEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeE
Confidence 65543322111 112256799999999999999 678899999999999999999999999999999887 233599
Q ss_pred eccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCH---
Q 041055 439 KTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTE--- 515 (526)
Q Consensus 439 ~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~--- 515 (526)
+|||++++ ++|++++.||.||+||.+|++|+|.+||+++.++|+|.+++|++.+++..++.++++|++.++.....
T Consensus 379 ~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 457 (503)
T PRK04813 379 HTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFEREFEL 457 (503)
T ss_pred ECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccccccchh
Confidence 99999999 89999999999999999999999999999999999999999999888777889999999876522111
Q ss_pred -HHHHHHHHhcC
Q 041055 516 -DQVMQFVTSQL 526 (526)
Q Consensus 516 -~~l~~~l~~~l 526 (526)
++++++++++|
T Consensus 458 ~~~l~~~~~~~l 469 (503)
T PRK04813 458 TKAIKKELKERL 469 (503)
T ss_pred HHHHHHHHHhhC
Confidence 45777777654
No 108
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-59 Score=491.08 Aligned_cols=442 Identities=22% Similarity=0.323 Sum_probs=344.4
Q ss_pred ChhhhhcccCCCCCCCCCceEEEeCC-------CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHH
Q 041055 49 DTATCVLSRFPHPDLAESRVALIDSA-------THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSIC 121 (526)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~a~~~~~-------~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~ 121 (526)
++.+.+... +...| +++|+++.+ ..+.+||+||.+++.++|++|.+ +| .+||+|+++++|+++|++++
T Consensus 2 s~~~~l~~~-a~~~p--~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~-~g-~~gd~V~l~~~n~~~~~~~~ 76 (578)
T PRK05850 2 SVPSLLRER-ASLQP--DDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRR-HG-STGDRAVILAPQGLEYIVAF 76 (578)
T ss_pred cHHHHHHHH-HhcCC--CceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCcccHHHHH
Confidence 355655555 55566 799988532 13789999999999999999998 88 68999999999999999999
Q ss_pred HHHHHcCCEEccCCC---CCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-------CCC-EEEEcCCCCCCCcchHHHH
Q 041055 122 LAIFSLGAILSPANS---INTESEIVKQVRDSGAKLIISASEELQKLTKV-------NVP-IIVTSRDQSNNKSVSVEEL 190 (526)
Q Consensus 122 lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~~-~i~~~~~~~~~~~~~~~~~ 190 (526)
|||+++|++++|+++ ..+.+++.++++++++++++++++....+... ..+ ++.++.. +.
T Consensus 77 lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 146 (578)
T PRK05850 77 LGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL----------DL 146 (578)
T ss_pred HHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc----------cc
Confidence 999999999999997 45789999999999999999998766554321 111 1111110 00
Q ss_pred hhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cc---cCCCCcEEEEeCChhHHHHH
Q 041055 191 IECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DV---THAQNDIFLCMIPMFHIYGL 266 (526)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~---~~~~~~~~l~~~p~~~~~g~ 266 (526)
.. .. .. ......++++++++|||||||.||||.++|+++...+......+ .. ....++++++.+|++|.+|+
T Consensus 147 ~~--~~-~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 222 (578)
T PRK05850 147 DS--PR-GS-DARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGL 222 (578)
T ss_pred cc--CC-cc-ccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchh
Confidence 00 00 00 11134568999999999999999999999999988765544322 11 12457899999999999998
Q ss_pred HHHHHhhcccCcEEEEecCC----CHHHHHHHHHhcCccEeecccHHHHHHHhh-c----cCCCCCCCceEEEEecCCCC
Q 041055 267 AFFATGLFCCGVTIVVMQRF----DLQAMIEAIKTYQVNNIPLVPPVILGLVKY-C----KDSSYLTSLRRVGSGAAPLS 337 (526)
Q Consensus 267 ~~~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~----~~~~~l~~lr~v~~gG~~l~ 337 (526)
...++.++..|+++++.+.. ++..+++.++++++++. .+|+.+..++.. . .....++++|.+++||++++
T Consensus 223 ~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~ 301 (578)
T PRK05850 223 VLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVH 301 (578)
T ss_pred HHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCC
Confidence 77789999999999988642 78999999999999855 567665444332 1 12346789999999999999
Q ss_pred HHHHHHHHHhCC-----CCceeeccccccccceeecccCcccc----------------------cCCCCcccccCCCcE
Q 041055 338 KELADEFRAKFP-----WVELRQGYGLTESCGATTFMVSPKQA----------------------RARSGSCGALSPTFY 390 (526)
Q Consensus 338 ~~~~~~~~~~~~-----~~~l~~~yG~tE~~~~~~~~~~~~~~----------------------~~~~~~~G~~~~~~~ 390 (526)
+++.++|.+.|+ +..+++.||+||++..+......... .....++|.|. +.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~ 380 (578)
T PRK05850 302 PATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPT 380 (578)
T ss_pred HHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCE
Confidence 999999998873 34789999999987544432111000 00011345543 578
Q ss_pred EEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccC-----------CCCeeeccceEEEcCCCcEEEEcccc
Q 041055 391 AKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFD-----------EDGWLKTGDLCYFDGEGFLYIVDRIK 459 (526)
Q Consensus 391 ~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~-----------~~~~~~TGD~~~~~~~G~l~~~GR~~ 459 (526)
++++|++++.++++|+.|||+++|++++.||+++++.|++.|. .++||+|||+|+++ ||++++.||.|
T Consensus 381 ~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~ 459 (578)
T PRK05850 381 VRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIK 459 (578)
T ss_pred EEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccc
Confidence 9999988888999999999999999999999999999999884 25799999999998 89999999999
Q ss_pred ceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCC
Q 041055 460 ELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLT 514 (526)
Q Consensus 460 d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~ 514 (526)
|+||++|++|+|.|||++|.+||.+ +++|++++++ .++.++|+|+++++...+
T Consensus 460 d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~ 512 (578)
T PRK05850 460 DLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSD 512 (578)
T ss_pred cEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcc
Confidence 9999999999999999999999985 5888888886 788999999988765443
No 109
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-58 Score=480.88 Aligned_cols=462 Identities=24% Similarity=0.299 Sum_probs=373.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
+|+.+.+... +++.| +++|+++. ++.+||.||.++++++|+.|.+ +|+++||+|+++++|+++|+++++||+++
T Consensus 3 ~~l~~~~~~~-a~~~p--~~~a~~~~--~~~~ty~el~~~~~~la~~L~~-~g~~~~~~v~v~~~n~~~~~~~~~a~~~~ 76 (533)
T PRK07798 3 WNIADLFEAV-ADAVP--DRVALVCG--DRRLTYAELEERANRLAHYLIA-QGLGPGDHVGIYARNRIEYVEAMLGAFKA 76 (533)
T ss_pred ccHHHHHHHH-HHhCC--CceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 5788887777 77777 79999984 6899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-----CCC-EEEEcCCCCCC---CcchHHHHhhhcCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-----NVP-IIVTSRDQSNN---KSVSVEELIECCDAAD 198 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-----~~~-~i~~~~~~~~~---~~~~~~~~~~~~~~~~ 198 (526)
|++++|+++.++.+++.++++++++++++++......+... ... ++.++...... +..++.+....... .
T Consensus 77 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 155 (533)
T PRK07798 77 RAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSP-E 155 (533)
T ss_pred CeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCC-c
Confidence 99999999999999999999999999999998765554321 112 33333221111 12345554432221 1
Q ss_pred CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh---------c----ccCCCCcEEEEeCChhHHHH
Q 041055 199 ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV---------D----VTHAQNDIFLCMIPMFHIYG 265 (526)
Q Consensus 199 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~---------~----~~~~~~~~~l~~~p~~~~~g 265 (526)
. .. ....++.++++|||||||.||+|+++|+++..........+ . .....+++++..+|++|.++
T Consensus 156 ~-~~-~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~ 233 (533)
T PRK07798 156 R-DF-GERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAG 233 (533)
T ss_pred C-CC-CCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhh
Confidence 1 11 11233457899999999999999999999876544322211 0 00146788999999999999
Q ss_pred HHHHHHhhcccCcEEEEec--CCCHHHHHHHHHhcCccEeecccHHHHH-HHhh-c-cCCCCCCCceEEEEecCCCCHHH
Q 041055 266 LAFFATGLFCCGVTIVVMQ--RFDLQAMIEAIKTYQVNNIPLVPPVILG-LVKY-C-KDSSYLTSLRRVGSGAAPLSKEL 340 (526)
Q Consensus 266 ~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~-l~~~-~-~~~~~l~~lr~v~~gG~~l~~~~ 340 (526)
+ ..++.++..|+++++.+ .+++..+++.++++++|.+.++|+.+.. +.+. . ....+++++|.+++||+++++++
T Consensus 234 ~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 234 Q-WAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred H-HHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHH
Confidence 9 57788999999999998 7899999999999999999999876643 3333 2 34567789999999999999999
Q ss_pred HHHHHHhCCCCceeeccccccccceeecccCcccccCCCCccc--ccCCCcEEEEEeCCCCccCCCCCc--ceEEEeccc
Q 041055 341 ADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCG--ALSPTFYAKVVDTETRLALPPYQR--GELWLKSPT 416 (526)
Q Consensus 341 ~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~ivd~~~~~~~~~g~~--Gel~v~~~~ 416 (526)
.+++.+.+++..+++.||+||++.......... ....| .+.++..++++|+ +++++++|+. |+++ .++.
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~i~~~-~~~~~~~g~~~~g~l~-~~~~ 385 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-----AVHTGGPRFTIGPRTVVLDE-DGNPVEPGSGEIGWIA-RRGH 385 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccCCCCC-----CccCCCCccCCCceEEEECC-CCCCCCCCCCCeeEEE-eecC
Confidence 999999998899999999999965544322111 22333 7889999999994 5668999987 6665 5568
Q ss_pred cccccCCCHHHHhcccC---CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeee
Q 041055 417 IMRGYFGNEEATAAAFD---EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLE 493 (526)
Q Consensus 417 ~~~gy~~~~~~t~~~~~---~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~ 493 (526)
++.||+++++.+.+.|. .++||+|||++++|++|++++.||.|++||.+|++|+|.+||++|.++|.|.+++|++.+
T Consensus 386 ~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~ 465 (533)
T PRK07798 386 IPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVP 465 (533)
T ss_pred ccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEecc
Confidence 99999999999998874 346999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 494 DEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 494 ~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+...++.+.++|+++++...+.++++++++++|
T Consensus 466 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 498 (533)
T PRK07798 466 DERWGQEVVAVVQLREGARPDLAELRAHCRSSL 498 (533)
T ss_pred CcccCceEEEEEEECCCCCCCHHHHHHHHhhhc
Confidence 888889999999999887788899999998875
No 110
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1e-58 Score=571.12 Aligned_cols=457 Identities=22% Similarity=0.278 Sum_probs=380.0
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++++.+..+ ++..| +++|+++. ++++||+||.++++++|++|.+ +|+++|++|+++++|++++++++|||+++
T Consensus 2188 ~~l~~~~~~~-a~~~p--~~~Av~~~--~~~lTY~eL~~~~~~lA~~L~~-~Gv~~g~~V~l~~~~s~~~vv~~lailka 2261 (4334)
T PRK05691 2188 QTLHGLFAAQ-AARTP--QAPALTFA--GQTLSYAELDARANRLARALRE-RGVGPQVRVGLALERSLEMVVGLLAILKA 2261 (4334)
T ss_pred cchHHHHHHH-HHHCC--CCeEEEeC--CeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHh
Confidence 4677877777 66677 79999984 6899999999999999999998 99999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC--CCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV--NVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQL 205 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (526)
|++++|++|.++.+++.++++++++++++++.+....+... ....+...... . ..... . ........
T Consensus 2262 G~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~-~-~~~~~~~~ 2330 (4334)
T PRK05691 2262 GGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFEALGELPAGVARWCLEDDA--------A-ALAAY-S-DAPLPFLS 2330 (4334)
T ss_pred CcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhhhhccccccceeEEeccch--------h-hhhcC-C-CCCCCCCC
Confidence 99999999999999999999999999999988766554321 11112221110 0 00000 0 11111134
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ- 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~- 284 (526)
.++++++++|||||||.||||+++|+++.+.+......++ +.++++++...|+.|..+. ..++.++..|+++++.+
T Consensus 2331 ~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~fd~~~-~~i~~~L~~G~~lvl~~~ 2407 (4334)
T PRK05691 2331 LPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFG--MRADDCELHFYSINFDAAS-ERLLVPLLCGARVVLRAQ 2407 (4334)
T ss_pred CCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcC--CCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEECCc
Confidence 5788999999999999999999999999988887777666 6789999999999998887 77889999999999875
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccccc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESC 363 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~ 363 (526)
.+++..+++.++++++|++.++|+++..|.+.......+.++|.+++||+++++++.++|.+.+++..+++.||+||++
T Consensus 2408 ~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~ 2487 (4334)
T PRK05691 2408 GQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAGQGEQLPVRMCITGGEALTGEHLQRIRQAFAPQLFFNAYGPTETV 2487 (4334)
T ss_pred ccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhccccCCCceEEEEccccCCHHHHHHHHHhCCCceEEeCcCCCcce
Confidence 4689999999999999999999999999987643444567899999999999999999999999778899999999998
Q ss_pred ceeecccCccc--ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCC-------
Q 041055 364 GATTFMVSPKQ--ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDE------- 434 (526)
Q Consensus 364 ~~~~~~~~~~~--~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~------- 434 (526)
...+.+..... ......++|+|+++..++|+| ++++++|.|+.|||+|+|+++++||+++|+.|.++|..
T Consensus 2488 ~~~~~~~~~~~~~~~~~~~~iG~pi~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~t~~~F~~~p~~~~~ 2566 (4334)
T PRK05691 2488 VMPLACLAPEQLEEGAASVPIGRVVGARVAYILD-ADLALVPQGATGELYVGGAGLAQGYHDRPGLTAERFVADPFAADG 2566 (4334)
T ss_pred EEEEEeecccccccCCCCCccccccCCCEEEEEC-CCCCCCCCCCceEEEecccccCccccCChhhhhhhccCCCCCCCC
Confidence 65443322111 111134689999999999999 56889999999999999999999999999999999843
Q ss_pred CCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCC----
Q 041055 435 DGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAG---- 510 (526)
Q Consensus 435 ~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~---- 510 (526)
++||+|||+|++++||.++++||.|++||++|++|+|.|||++|.+||+|.+|+|++.++ ..++.++++|+....
T Consensus 2567 ~r~y~TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~EIE~~l~~~p~V~~a~V~~~~~-~~~~~lva~vv~~~~~~~~ 2645 (4334)
T PRK05691 2567 GRLYRTGDLVRLRADGLVEYVGRIDHQVKIRGFRIELGEIESRLLEHPAVREAVVLALDT-PSGKQLAGYLVSAVAGQDD 2645 (4334)
T ss_pred CceEeccceEEEcCCCCEEEeecccCeEEeeeEEechHHHHHHHHhCCCcceEEEEEeeC-CCCcEEEEEEEeccccccc
Confidence 359999999999999999999999999999999999999999999999999999999854 467889999987432
Q ss_pred --CCCCHHHHHHHHHhcC
Q 041055 511 --SQLTEDQVMQFVTSQL 526 (526)
Q Consensus 511 --~~~~~~~l~~~l~~~l 526 (526)
.....++++++++++|
T Consensus 2646 ~~~~~~~~~l~~~l~~~L 2663 (4334)
T PRK05691 2646 EAQAALREALKAHLKQQL 2663 (4334)
T ss_pred ccccccHHHHHHHHHhhC
Confidence 1234578999998875
No 111
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=3.4e-58 Score=520.09 Aligned_cols=456 Identities=21% Similarity=0.309 Sum_probs=365.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.++.+.+.+. ++++++ ++.|+.+. +++++||+||.++++++|+.|. .|+++||+|+++++|+++++++++||+++
T Consensus 631 ~~~~~~l~~~-~~~~~~-~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~--~g~~~gd~V~i~~~n~~~~~~~~la~~~~ 705 (1140)
T PRK06814 631 RTLFEALIEA-AKIHGF-KKLAVEDP-VNGPLTYRKLLTGAFVLGRKLK--KNTPPGENVGVMLPNANGAAVTFFALQSA 705 (1140)
T ss_pred CCHHHHHHHH-HHHcCC-CCeEeECC-CCCccCHHHHHHHHHHHHHHHH--hcCCCCCeEEEEcCCchHHHHHHHHHHHC
Confidence 4455666555 334332 56777653 4678999999999999999995 49999999999999999999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhh------c--CCCCEEEEcCCCCC-CCcchHHHHhhhcCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLT------K--VNVPIIVTSRDQSN-NKSVSVEELIECCDAAD 198 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~------~--~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~ 198 (526)
|++++|++|..+.+++.++++++++++++++++..+... . ....++.+++.... .....+.+......+
T Consensus 706 G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-- 783 (1140)
T PRK06814 706 GRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFP-- 783 (1140)
T ss_pred CCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCC--
Confidence 999999999999999999999999999999876543221 1 12233433321110 011111111111111
Q ss_pred CCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCc
Q 041055 199 ELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGV 278 (526)
Q Consensus 199 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~ 278 (526)
..+.+...++++++++|||||||.||+|.++|+++.+........+. ..++|++++.+|++|.+++...++.++..|+
T Consensus 784 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~ 861 (1140)
T PRK06814 784 LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARID--FSPEDKVFNALPVFHSFGLTGGLVLPLLSGV 861 (1140)
T ss_pred ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhC--CCCcCEEEEecchHHHHHHHHHHHHHHHcCC
Confidence 11111356789999999999999999999999999888777666665 6789999999999999998777888999999
Q ss_pred EEEEecC-CCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecc
Q 041055 279 TIVVMQR-FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGY 357 (526)
Q Consensus 279 ~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~y 357 (526)
++++.+. .+.+.+.+.++++++|++..+|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.+ ++++++.|
T Consensus 862 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~Y 939 (1140)
T PRK06814 862 KVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA-HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGY 939 (1140)
T ss_pred EEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc-ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEecc
Confidence 9998864 56788899999999999999999999887652 346688999999999999999999999998 78999999
Q ss_pred ccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCe
Q 041055 358 GLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGW 437 (526)
Q Consensus 358 G~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~ 437 (526)
|+||++..+....... ...+++|+|.|++++++.+.+ + .++.|||+++|++++.||+++++........+||
T Consensus 940 G~TE~~~~~~~~~~~~---~~~~~vG~p~~g~~~~~~~~~-~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~ 1011 (1140)
T PRK06814 940 GVTETAPVIALNTPMH---NKAGTVGRLLPGIEYRLEPVP-G----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGW 1011 (1140)
T ss_pred ccccccceEEecCCCC---CCCCcCCccCCCCeEEEeecC-C----CCCceEEEEeCCCcchhhcCCCCCCccccCCCCe
Confidence 9999987665433221 236899999999999998743 2 3678999999999999999876533222235899
Q ss_pred eeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHH
Q 041055 438 LKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQ 517 (526)
Q Consensus 438 ~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~ 517 (526)
|+|||+|++|+||++++.||.||+||++|++|+|.|||+++.+|+.+.+++|++++++..|+.+++++. +.+.+.++
T Consensus 1012 ~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~~~~~~~ 1088 (1140)
T PRK06814 1012 YDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT---ASDATRAA 1088 (1140)
T ss_pred EecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CCCcCHHH
Confidence 999999999999999999999999999999999999999999999999999999999988998887764 34566788
Q ss_pred HHHHHHhc
Q 041055 518 VMQFVTSQ 525 (526)
Q Consensus 518 l~~~l~~~ 525 (526)
++++++++
T Consensus 1089 l~~~~~~~ 1096 (1140)
T PRK06814 1089 FLAHAKAA 1096 (1140)
T ss_pred HHHHHHHc
Confidence 99988864
No 112
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.3e-59 Score=476.12 Aligned_cols=393 Identities=35% Similarity=0.554 Sum_probs=319.2
Q ss_pred CCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCC
Q 041055 59 PHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSIN 138 (526)
Q Consensus 59 ~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 138 (526)
++++| |++|+++ ..++.+||+||.++++++|..|.+ +|+++|++|+++++|+++++++++||+++|++++|++|.+
T Consensus 5 a~~~p--d~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~-~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 5 AQRYP--DRIALID-DEGRSLTYKQLYERVRKLAAALRK-LGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHST--TSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHH-TTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred HhhCC--CceEEEE-CCCEEEEHHHHHHHHHHHhhHHHH-hCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 44556 7999999 568999999999999999999996 9999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCeEEEE----cchhHHHhh---c-CCCC--EEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCC
Q 041055 139 TESEIVKQVRDSGAKLIIS----ASEELQKLT---K-VNVP--IIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQD 208 (526)
Q Consensus 139 ~~~~l~~~l~~~~~~~ii~----~~~~~~~~~---~-~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (526)
+.+++.++++.++++++|+ +......+. . .... ++.++....... ..+......... ..+ ...++
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~--~~~~~ 155 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKK-EALKSASLSDEP--QSP--EDSPD 155 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTC-HHHHHHHHCHCS--HST--THTTT
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccc-cccccccccccc--ccC--CCCcc
Confidence 9999999999999999997 222222222 1 1112 334433221111 111111000000 000 01568
Q ss_pred CEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHh--hhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCC
Q 041055 209 DTAAILYSSGTTGTSKGVILTHANFISIMQLLR--WTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRF 286 (526)
Q Consensus 209 ~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~--~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~ 286 (526)
++++++|||||||.||+|.++|+++.+.+..+. ...+ .+ |++++.+|++|.+|+...++.++..|+++++.+..
T Consensus 156 ~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~--~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 231 (417)
T PF00501_consen 156 DPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFG--LG--DRILSFLPLSHIFGLISALLAALFSGATLVLPSPF 231 (417)
T ss_dssp SEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTT--TT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSH
T ss_pred ceeEeeccccccccccccccccccccccccccccccccc--cC--ceEEeeccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999877754 1122 12 69999999999999988899999999999999865
Q ss_pred C---HHHHHHHHHhcCccEeecccHHHHHHHhhccC-----CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccc
Q 041055 287 D---LQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD-----SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYG 358 (526)
Q Consensus 287 ~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG 358 (526)
. ++.+++.++++++|+++++|+++..+++.... ..+++++|.++++|+++++++.+++++.++..++.+.||
T Consensus 232 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 311 (417)
T PF00501_consen 232 DLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYG 311 (417)
T ss_dssp HHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEE
T ss_pred cccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceeccc
Confidence 4 47789999999999999999999999985222 358899999999999999999999999996669999999
Q ss_pred cccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCee
Q 041055 359 LTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWL 438 (526)
Q Consensus 359 ~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~ 438 (526)
+||++.+++......... ..+++|+|+|+++++|+|+++++++++|+.|||+|+||+++.||+++++.+.+.|.++|||
T Consensus 312 ~tE~~~~~~~~~~~~~~~-~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~ 390 (417)
T PF00501_consen 312 STETGSIATIRPPEDDIE-KPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWY 390 (417)
T ss_dssp EGGGSSEEEEEETTTHHS-STTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEE
T ss_pred ccccceeeeccccccccc-ccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccce
Confidence 999999887543222212 2788999999999999998889999999999999999999999999999999999766899
Q ss_pred eccceEEEcCCCcEEEEccccceEEec
Q 041055 439 KTGDLCYFDGEGFLYIVDRIKELIKHN 465 (526)
Q Consensus 439 ~TGD~~~~~~~G~l~~~GR~~d~ik~~ 465 (526)
+|||+|++|+||.++++||.||+||++
T Consensus 391 ~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 391 RTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred ecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999999999999975
No 113
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.1e-58 Score=472.35 Aligned_cols=407 Identities=24% Similarity=0.346 Sum_probs=342.8
Q ss_pred CCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCC
Q 041055 59 PHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSIN 138 (526)
Q Consensus 59 ~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 138 (526)
+...+ +++|+++ .++.+||.||.++++++|..|.+ .|+++|++|+++++|+++++++++||+++|++++|+++..
T Consensus 13 a~~~~--~~~a~~~--~~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 87 (458)
T PRK09029 13 AQVRP--QAIALRL--NDEVLTWQQLCARIDQLAAGFAQ-QGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQL 87 (458)
T ss_pred HHhCC--Cceeeec--CCcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCC
Confidence 44555 7899987 47899999999999999999998 8999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCC
Q 041055 139 TESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSG 218 (526)
Q Consensus 139 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 218 (526)
+.+++.++++++++++++++.+... +. ...... +. . . ...+.....++++++++||||
T Consensus 88 ~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~~~~~------------~~---~--~--~~~~~~~~~~~~~a~i~~TSG 145 (458)
T PRK09029 88 PQPLLEELLPSLTLDFALVLEGENT-FS--ALTSLH------------LQ---L--V--EGAHAVAWQPQRLATMTLTSG 145 (458)
T ss_pred CHHHHHHHHHhcCCCEEEEcCcccc-hh--hccccc------------cc---c--c--cccCcccCCCCCeEEEEECCC
Confidence 9999999999999999998765422 10 000000 00 0 0 001111446788999999999
Q ss_pred CCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhc
Q 041055 219 TTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTY 298 (526)
Q Consensus 219 TTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~ 298 (526)
|||.||+|.+||+++...+......+. ..++++++..+|++|.+|+ ..++.++..|+++++.+. ..+++.+ .
T Consensus 146 TTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~---~~~~~~i--~ 217 (458)
T PRK09029 146 STGLPKAAVHTAQAHLASAEGVLSLMP--FTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK---QPLEQAL--A 217 (458)
T ss_pred CCCCCCEEEEeHHHHHHHHHHHhhcCC--CCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh---HHHHHHH--h
Confidence 999999999999999988877766665 6788999999999999998 566778899999998764 5566666 4
Q ss_pred CccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCC
Q 041055 299 QVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARAR 378 (526)
Q Consensus 299 ~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~ 378 (526)
++|.+..+|+++..++..... ..++|.+++||+++++.+.+.+.+. +.++++.||+||++...+.... . .
T Consensus 218 ~~t~~~~~P~~~~~l~~~~~~---~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~----~-~ 287 (458)
T PRK09029 218 GCTHASLVPTQLWRLLDNRSE---PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRA----D-G 287 (458)
T ss_pred hceeeecChHHHHHHHhcccc---CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCC----C-C
Confidence 789999999999999876332 4579999999999999999998864 7899999999999865443221 1 1
Q ss_pred CCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccc
Q 041055 379 SGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRI 458 (526)
Q Consensus 379 ~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~ 458 (526)
..++|+|++++.+++++ |||+++|+.++.||+++++.+.... .+|||+|||+|++| ||.+++.||+
T Consensus 288 ~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~ 353 (458)
T PRK09029 288 LAGVGSPLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRL 353 (458)
T ss_pred CCCCCCCCCCCEEEEeC------------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEeccc
Confidence 45699999999999986 8999999999999999988876544 67999999999999 9999999999
Q ss_pred cceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 459 KELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 459 ~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
||+||++|++|+|.|||++|.++|.|.+++|++.+++..++.++++|+... ..+.++++++|+++|
T Consensus 354 ~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--~~~~~~l~~~~~~~l 419 (458)
T PRK09029 354 DNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDS--EAAVVNLAEWLQDKL 419 (458)
T ss_pred ccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCc--ccCHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999998763 356789999999875
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.6e-56 Score=456.21 Aligned_cols=408 Identities=28% Similarity=0.442 Sum_probs=341.4
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 80 TYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 80 Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..++++++++++++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 79 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDS 79 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999998 9999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHH
Q 041055 160 EELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQL 239 (526)
Q Consensus 160 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~ 239 (526)
...... +.. ..+............. ......+++++++|||||||.||+|.++|+++...+..
T Consensus 80 ~~~~~~-------~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~ 142 (436)
T TIGR01923 80 LLEEKD-------FQA---------DSLDRIEAAGRYETSL-SASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVG 142 (436)
T ss_pred cccccc-------eee---------cchHhhhhcccccccc-cccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHH
Confidence 532110 000 0111111111110111 11345688999999999999999999999999988877
Q ss_pred HhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhccC
Q 041055 240 LRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD 319 (526)
Q Consensus 240 ~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 319 (526)
....++ ..++|+++..+|++|.+++ ..++.++..|+++++.+.+ ..+++.++++++|++.++|+++..+++....
T Consensus 143 ~~~~~~--~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~ 217 (436)
T TIGR01923 143 SKENLG--FTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEGGH 217 (436)
T ss_pred HHhhcC--CCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCC
Confidence 776665 6789999999999999998 6678899999999998765 4999999999999999999999999886332
Q ss_pred CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCC
Q 041055 320 SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETR 399 (526)
Q Consensus 320 ~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~ 399 (526)
.+++|.++++|+++++++.+.+.+. ++.+++.||+||++..++......... ..++|.|++++++++.+.+.
T Consensus 218 ---~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~--~~~~G~~~~~~~~~i~~~~~- 289 (436)
T TIGR01923 218 ---NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHA--RPDVGRPLAGREIKIKVDNK- 289 (436)
T ss_pred ---CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCcccccc--ccCCCccCCCcEEEEEeCCC-
Confidence 2789999999999999999988764 789999999999987655433322221 23599999999999844232
Q ss_pred ccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHh
Q 041055 400 LALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLL 479 (526)
Q Consensus 400 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~ 479 (526)
++.|||+++|+.++.||+++++.+...+ .++||+|||++++++||.+++.||.||+||++|.+|+|.+||++|.
T Consensus 290 -----~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~ 363 (436)
T TIGR01923 290 -----EGHGEIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLY 363 (436)
T ss_pred -----CCceEEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHH
Confidence 2679999999999999999988887765 5799999999999999999999999999999999999999999999
Q ss_pred cCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 480 SHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 480 ~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
++|.|.+++|++.++...++.++++|++.++ .+.+++.++++++|
T Consensus 364 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~~~~~l~~~l~~~l 408 (436)
T TIGR01923 364 QHPGIQEAVVVPKPDAEWGQVPVAYIVSESD--ISQAKLIAYLTEKL 408 (436)
T ss_pred hCCCeeEEEEeCCcchhcCCeeEEEEEECCC--CCHHHHHHHHHHhh
Confidence 9999999999999888788899999998754 56678888888764
No 115
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2e-56 Score=451.48 Aligned_cols=395 Identities=28% Similarity=0.377 Sum_probs=334.4
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 80 TYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 80 Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
||.||.+.+.++|+.|.++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 89999999999999998657999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHH
Q 041055 160 EELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQL 239 (526)
Q Consensus 160 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~ 239 (526)
+....+.......+..... .......... ..........+++++++|||||||.||+|.++|+++......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~ 151 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPL--------ELAALDDAPA-PPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAW 151 (408)
T ss_pred chhhhccccCCceEEechh--------hhhhcccccc-cccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHH
Confidence 7766554333233222211 0000000000 011111234688999999999999999999999999988887
Q ss_pred HhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCC---HHHHHHHHHhcCccEeecccHHHHHHHhh
Q 041055 240 LRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFD---LQAMIEAIKTYQVNNIPLVPPVILGLVKY 316 (526)
Q Consensus 240 ~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 316 (526)
....+. ..+++++++..|++|.+++ ..++.++..|+++++.+... +..+.+.++++++|.+.++|.+++.|++.
T Consensus 152 ~~~~~~--~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 152 LARRYG--LDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred HHHhcC--CCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 777655 6688999999999999998 67889999999999887543 68899999999999999999999999987
Q ss_pred ccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccC--CCCcccccCCCcEEEEE
Q 041055 317 CKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARA--RSGSCGALSPTFYAKVV 394 (526)
Q Consensus 317 ~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~--~~~~~G~~~~~~~~~iv 394 (526)
.. ..++++|.+++||+++++++.+.+.+.++++.+++.||+||++.++........... .+.++|+|.++++++|+
T Consensus 229 ~~--~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~ 306 (408)
T TIGR01733 229 LP--PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVL 306 (408)
T ss_pred hh--hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEE
Confidence 43 678899999999999999999999999966899999999999887753322222111 16789999999999999
Q ss_pred eCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCC------C--eeeccceEEEcCCCcEEEEccccceEEecC
Q 041055 395 DTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDED------G--WLKTGDLCYFDGEGFLYIVDRIKELIKHNG 466 (526)
Q Consensus 395 d~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~------~--~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G 466 (526)
|++ ++++++|+.|||+++|+.++.||+++++.+.+.|..+ + ||+|||++++|++|++++.||.||+++.+|
T Consensus 307 ~~~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G 385 (408)
T TIGR01733 307 DDD-LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRG 385 (408)
T ss_pred CCC-CCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCe
Confidence 966 8899999999999999999999999999999887433 2 999999999999999999999999999999
Q ss_pred eeeChHHHHHHHhcCCCcccEEE
Q 041055 467 YQVAPAELEAVLLSHPNILDAAV 489 (526)
Q Consensus 467 ~~v~~~eIE~~l~~~~~v~~~~v 489 (526)
++|+|.+||+++.++|.|.+|+|
T Consensus 386 ~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 386 YRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred EEechHHHHHHHhcCcchhhhcC
Confidence 99999999999999999999875
No 116
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.8e-56 Score=463.92 Aligned_cols=454 Identities=22% Similarity=0.305 Sum_probs=348.9
Q ss_pred hhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCC
Q 041055 50 TATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGA 129 (526)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 129 (526)
+.+.++.. +...+ +.+++.+.+.++.+||.||.+++.++|++|.+ +|+++||+|+++++|+++|+++++||+++|+
T Consensus 4 ~~~~~~~~-~~~~~--~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~ 79 (545)
T PRK07768 4 FTEKMYAN-ARTSP--RGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-AGVGPGDAVAVLAGAPVEIAPTAQGLWMRGA 79 (545)
T ss_pred HHHHHHHH-hhCCC--cceEEecCCCceEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHcCc
Confidence 55656655 55555 68888887778899999999999999999998 9999999999999999999999999999999
Q ss_pred EEccCCCCCCHHHH-------HHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCC
Q 041055 130 ILSPANSINTESEI-------VKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPG 202 (526)
Q Consensus 130 ~~v~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (526)
+++++++..+.+++ .++++.++++.++++......+...... ......+.++.... + .+.
T Consensus 80 v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~-~---~~~ 146 (545)
T PRK07768 80 SLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK---------GIRVLTVADLLAAD-P---IDP 146 (545)
T ss_pred cccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc---------CCceeehhhhcccC-C---CCc
Confidence 99999988775544 4567778999999987644333211100 00111222222211 1 111
Q ss_pred CCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCC-cEEEEeCChhHHHHHHHHHHhhcccCcEEE
Q 041055 203 CQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQN-DIFLCMIPMFHIYGLAFFATGLFCCGVTIV 281 (526)
Q Consensus 203 ~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~-~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v 281 (526)
....++++++++|||||||.||+|+++|+++...+......++ +.++ |++++.+|++|.+++...++.++..|++++
T Consensus 147 ~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v 224 (545)
T PRK07768 147 VETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAE--FDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELV 224 (545)
T ss_pred CCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcC--CCCCCceeEEeCCCccchHHHHHHHHHHHCCceEE
Confidence 2446789999999999999999999999999888777666655 4554 899999999999999767778899999998
Q ss_pred EecC----CCHHHHHHHHHhcCccEeecccHHHHHHHhhc-----cCCCCCCCceEEEEecCCCCHHHHHHHHHh---C-
Q 041055 282 VMQR----FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-----KDSSYLTSLRRVGSGAAPLSKELADEFRAK---F- 348 (526)
Q Consensus 282 ~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-----~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~---~- 348 (526)
+... .++..+++.+++++++++...|..+..+.+.. ....+++++|.++++|+++++++.+++.+. +
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g 304 (545)
T PRK07768 225 KVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFG 304 (545)
T ss_pred EeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcC
Confidence 8754 26788899999999999887777766655431 114678899999999999999999999874 4
Q ss_pred -CCCceeeccccccccceeecccCccc-----------------------ccCCCCcccccCCCcEEEEEeCCCCccCCC
Q 041055 349 -PWVELRQGYGLTESCGATTFMVSPKQ-----------------------ARARSGSCGALSPTFYAKVVDTETRLALPP 404 (526)
Q Consensus 349 -~~~~l~~~yG~tE~~~~~~~~~~~~~-----------------------~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~ 404 (526)
+...+++.||+||++..++....... ....++++|+|.++++++++| ++++++++
T Consensus 305 ~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~ 383 (545)
T PRK07768 305 LRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPP 383 (545)
T ss_pred CCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCC
Confidence 22359999999999876543321100 011246899999999999999 66789999
Q ss_pred CCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCc
Q 041055 405 YQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNI 484 (526)
Q Consensus 405 g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v 484 (526)
|+.|||+++|+.++.||++++... ..++.+|||+|||+++++++|.++++||.||+||++|.+|+|.|||++|.++|+|
T Consensus 384 g~~Gel~v~~~~~~~gy~~~~~~~-~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v 462 (545)
T PRK07768 384 RGVGVIELRGESVTPGYLTMDGFI-PAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGV 462 (545)
T ss_pred CCEEEEEEccCcccccccCCCCCc-ccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCccc
Confidence 999999999999999999765443 3344678999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEeee--CCCCCceEEEEEEeCCCCCC-CHHHHHHHHHh
Q 041055 485 LDAAVIPLE--DEEAGQIPMAYVVRAAGSQL-TEDQVMQFVTS 524 (526)
Q Consensus 485 ~~~~vv~~~--~~~~~~~~~a~vv~~~~~~~-~~~~l~~~l~~ 524 (526)
.+++|++++ +...++..+++|+..++... ...++.+++++
T Consensus 463 ~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~ 505 (545)
T PRK07768 463 RPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAH 505 (545)
T ss_pred ccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHH
Confidence 998888765 33345555555554433221 11345555544
No 117
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-55 Score=443.18 Aligned_cols=374 Identities=17% Similarity=0.225 Sum_probs=325.6
Q ss_pred CceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 76 HERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 76 ~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
++++||.||.++++++|+.| . +|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..++++++++.+
T Consensus 6 ~~~~ty~el~~~~~~~a~~l-~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~ 83 (414)
T PRK08308 6 DEEYSKSDFDLRLQRYEEME-Q-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGL 83 (414)
T ss_pred CceecHHHHHHHHHHHHHHH-H-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEE
Confidence 67999999999999999998 4 689999999999999999999999999999999999999999999999999999999
Q ss_pred EEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHH
Q 041055 156 ISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVILTHANFIS 235 (526)
Q Consensus 156 i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~ 235 (526)
+++..... .. .. ....++++++++|||||||.||+|.++|+++..
T Consensus 84 i~~~~~~~-----------~~----------------------~~--~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~ 128 (414)
T PRK08308 84 LYGESDFT-----------KL----------------------EA--VNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDR 128 (414)
T ss_pred EecCcccc-----------cc----------------------cC--CCCCCCCceEEEECCCCCCCCcEEEEehHhHHH
Confidence 98753100 00 00 023567899999999999999999999999998
Q ss_pred HHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHh
Q 041055 236 IMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVK 315 (526)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 315 (526)
.+..+...+. ...+++.+..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|+++++|+++..+.+
T Consensus 129 ~~~~~~~~~~--~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 206 (414)
T PRK08308 129 EIEAYNEALN--CEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGR 206 (414)
T ss_pred HHHHHHHhhC--CCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHh
Confidence 8777666655 56789999999999999987788899999999999998999999999999999999999999999987
Q ss_pred hccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEe
Q 041055 316 YCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVD 395 (526)
Q Consensus 316 ~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd 395 (526)
.... ..+++.++++|+++++++.+++++. ..++++.||+||++.+..... . ..++++|+|+|++++++.+
T Consensus 207 ~~~~---~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~----~-~~~~~~G~p~~~~~~~~~~ 276 (414)
T PRK08308 207 LLPG---TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICPD----M-KSHLDLGNPLPHVSVSAGS 276 (414)
T ss_pred cCCc---cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecCC----C-CCCCccCccCCCeEEEEec
Confidence 6322 2368899999999999999999987 468999999999986443211 1 1267899999999999876
Q ss_pred CCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHH
Q 041055 396 TETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELE 475 (526)
Q Consensus 396 ~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE 475 (526)
. .++.|||++++ .++||+|||+|++++||+++++||.||+||++|++|+|.|||
T Consensus 277 ~-------~~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE 330 (414)
T PRK08308 277 D-------ENAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVE 330 (414)
T ss_pred C-------CCCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHH
Confidence 2 35679999985 368999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 476 AVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 476 ~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
+++.++|+|.+++|++.+++..++.++++++... ..+.++++++++++|
T Consensus 331 ~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l 379 (414)
T PRK08308 331 DVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHE--EIDPVQLREWCIQHL 379 (414)
T ss_pred HHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCC--CCCHHHHHHHHHHhC
Confidence 9999999999999999999988999999998764 467789999998875
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-53 Score=406.49 Aligned_cols=465 Identities=23% Similarity=0.329 Sum_probs=379.7
Q ss_pred CCChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHH
Q 041055 47 DLDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFS 126 (526)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~ 126 (526)
..++++.+.++ ++++| +++|+++.++.+.+||+|+.+++.++|+.|.. .|++.||+|+++|+|++|++.++||.++
T Consensus 76 ~~ti~~~F~~~-vrr~p--~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~-~~l~~GD~VAL~men~pefv~lWlGLaK 151 (649)
T KOG1179|consen 76 RRTIAELFLSQ-VRRQP--DKPAIIYEGPFQSLTFAELDARSNRVANYLHA-EGLKAGDVVALLMENRPEFVALWLGLAK 151 (649)
T ss_pred CCcHHHHHHHH-HHhCC--CccEEEEeCCCceeeHHHHHHHHHHHHHHHHH-hhcccCCEEEEecCCChhHHHHHHhHHh
Confidence 37899999888 78888 79999997777899999999999999999998 8999999999999999999999999999
Q ss_pred cCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC-------CCCEEEEcCCCCCCCcchHHHHhhhcCCCCC
Q 041055 127 LGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV-------NVPIIVTSRDQSNNKSVSVEELIECCDAADE 199 (526)
Q Consensus 127 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (526)
+|++...+|+++..+.+.|.++.++++.++++++....+... ++.....+......+..++.+.+..... .+
T Consensus 152 lGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~-~~ 230 (649)
T KOG1179|consen 152 LGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPK-HP 230 (649)
T ss_pred hCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhccccc-CC
Confidence 999999999999999999999999999999999887665532 3334444444444555555555443322 22
Q ss_pred CC---CCCCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhccc
Q 041055 200 LP---GCQLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCC 276 (526)
Q Consensus 200 ~~---~~~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~ 276 (526)
.| ....+-.++++.+|||||||.||+.+++|.............++ +.++|+++..+|++|+.|.+..+..++..
T Consensus 231 vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g--~~~~DvvY~~lPLYHsaa~ilGi~~~l~~ 308 (649)
T KOG1179|consen 231 VPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFG--MTADDVVYTTLPLYHSAAGILGIGGCLLH 308 (649)
T ss_pred CCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhC--CCccceEEEcchhHHHHHHHHHHHHHHhc
Confidence 12 11445678999999999999999999999999887776666666 78999999999999999999999999999
Q ss_pred CcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceee
Q 041055 277 GVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ 355 (526)
Q Consensus 277 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~ 355 (526)
|+++++-.+|+..++|+...+|.+|++.-+--+.+-|+..+ .+...-..+|..+ |..+.++.++.|.++|+...|.+
T Consensus 309 GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE 386 (649)
T KOG1179|consen 309 GATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGE 386 (649)
T ss_pred CceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEE
Confidence 99999999999999999999999999998888888888773 3344445667655 56688999999999997677999
Q ss_pred ccccccccceeecccCcccccCCCCcccccC------CCcEEEEEeCCCCc----------cCCCCCcceEEEec----c
Q 041055 356 GYGLTESCGATTFMVSPKQARARSGSCGALS------PTFYAKVVDTETRL----------ALPPYQRGELWLKS----P 415 (526)
Q Consensus 356 ~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~------~~~~~~ivd~~~~~----------~~~~g~~Gel~v~~----~ 415 (526)
.||+||........ .. ..|.+|... --+++-=+|+++++ +|++||.|.|+-+= |
T Consensus 387 ~YgaTEgn~~~~N~-d~-----~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P 460 (649)
T KOG1179|consen 387 FYGATEGNSNLVNY-DG-----RVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNP 460 (649)
T ss_pred EeccccCcceeeee-cC-----ccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCc
Confidence 99999987654432 11 144554321 11233335555554 67899999775442 2
Q ss_pred -ccccccCCCHHHHhccc------CCCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEE
Q 041055 416 -TIMRGYFGNEEATAAAF------DEDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAA 488 (526)
Q Consensus 416 -~~~~gy~~~~~~t~~~~------~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~ 488 (526)
.-+.||.++...|+... .+|-||.|||+-.+|+.|++|+.+|..|.+..+|++|+..|||.+|.....+.|+.
T Consensus 461 ~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~ 540 (649)
T KOG1179|consen 461 LRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVN 540 (649)
T ss_pred hhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhcccccee
Confidence 23889999888877664 45679999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeCCCC-CceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 489 VIPLEDEEA-GQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 489 vv~~~~~~~-~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
|.|+.-+.. |..=+|.|+..|+.+.+.+.+-.++++.|
T Consensus 541 VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~L 579 (649)
T KOG1179|consen 541 VYGVTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENL 579 (649)
T ss_pred EEEEecCCccCccceEEEEecCcccchHHHHHHHHHhhC
Confidence 999976644 56778899999998888888888887654
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.2e-45 Score=405.73 Aligned_cols=413 Identities=16% Similarity=0.132 Sum_probs=312.3
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeC---CCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHH
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDS---ATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAI 124 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~---~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~ 124 (526)
.++.+.+... ++..+ +++|+... +..+++||+|+.++++++|.+|.+ +|+++||+|+|+++|+++|+++.+||
T Consensus 427 ~Tl~dll~~~-a~~~p--d~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-lGV~~GDrVaIls~N~~Ewvia~lA~ 502 (1452)
T PTZ00297 427 RSLGEMWERS-VTRHS--TFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-LGVRPGDVIGVDCEASRNIVILEVAC 502 (1452)
T ss_pred CCHHHHHHHH-HHHCC--CCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4778877776 56666 68888631 233689999999999999999998 99999999999999999999999999
Q ss_pred HHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcC---CCC-EEEEcCCC--C------C--CCcchHHHH
Q 041055 125 FSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKV---NVP-IIVTSRDQ--S------N--NKSVSVEEL 190 (526)
Q Consensus 125 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~---~~~-~i~~~~~~--~------~--~~~~~~~~~ 190 (526)
+++|++++|+++ +.+++.+++++++++++|++.+....+... .++ +|+++... . . ....++.++
T Consensus 503 ~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~l 580 (1452)
T PTZ00297 503 ALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFV 580 (1452)
T ss_pred HHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHH
Confidence 999999999975 467999999999999999998877766532 344 44443210 0 0 113456666
Q ss_pred hhhcCCCCCCCCCCCCCCCEEEEEc---CCCCCCCchHHHhhhHHHHHHHHHHhhhhcc-cCCCCcEEEEeCChhHHHHH
Q 041055 191 IECCDAADELPGCQLTQDDTAAILY---SSGTTGTSKGVILTHANFISIMQLLRWTVDV-THAQNDIFLCMIPMFHIYGL 266 (526)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~a~i~~---TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~ 266 (526)
.+.............++++++.|+| ||||||.||||++||+|++..+......... ...++|++++++|++|+++.
T Consensus 581 l~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er 660 (1452)
T PTZ00297 581 EQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNR 660 (1452)
T ss_pred HhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHH
Confidence 6543211111112346788999985 9999999999999999999988776542211 14578999999999999997
Q ss_pred HHHHHhhcccCcEEEEecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cC--C----------------------C
Q 041055 267 AFFATGLFCCGVTIVVMQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KD--S----------------------S 321 (526)
Q Consensus 267 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~--~----------------------~ 321 (526)
...+.++..|+++.. ++++.+++.|++++||+++++|.++..+.+.. .+ . .
T Consensus 661 -~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g 736 (1452)
T PTZ00297 661 -VFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIH 736 (1452)
T ss_pred -HHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcC
Confidence 556677889988864 47899999999999999999999998775430 00 0 0
Q ss_pred C-----------------C-CCceEEEEecC--CCCHHHHHHHHHhCCCCceeeccccccccceeecccCcccccCCCCc
Q 041055 322 Y-----------------L-TSLRRVGSGAA--PLSKELADEFRAKFPWVELRQGYGLTESCGATTFMVSPKQARARSGS 381 (526)
Q Consensus 322 ~-----------------l-~~lr~v~~gG~--~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 381 (526)
. + .++|.+++||+ +++..+.. ++++..+||+||+. +.... .. ...
T Consensus 737 ~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~-------~i~i~~g~glTE~~---~~~~~-~~----~~~ 801 (1452)
T PTZ00297 737 RRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE-------HISVCYVPCLREVF---FLPSE-GV----FCV 801 (1452)
T ss_pred CCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-------CceEEEecceEEee---eecCC-CC----ccc
Confidence 0 0 46899999873 55544333 46788899999953 22221 11 122
Q ss_pred ccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEccccce
Q 041055 382 CGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVDRIKEL 461 (526)
Q Consensus 382 ~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~GR~~d~ 461 (526)
.|.|+|+++++|.+.+.... .+..|||+++ |++||+.|++.+ +||+ +||.|+|+||+||+
T Consensus 802 ~G~PlpgvEvKI~~~~E~~~--~~~~GEIlvr-------~~kdpe~T~e~~--~gW~---------~dG~L~IidRkKdl 861 (1452)
T PTZ00297 802 DGTPAPSLQVDLEPFDEPSD--GAGIGQLVLA-------KKGEPRRTLPIA--AQWK---------RDRTLRLLGPPLGI 861 (1452)
T ss_pred CCeecCceEEEEcccccccC--CCCCCeEEEE-------ECCChHHHHHhh--CcCc---------cCCeEEEEeccccc
Confidence 39999999999987422111 1236999995 458999999853 5675 68999999999999
Q ss_pred EEe-cCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC
Q 041055 462 IKH-NGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 462 ik~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
||. +|++|.|..||+++.++|.|.+++|+|...+ .++|+|++.+
T Consensus 862 ikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k----~lvALVvpd~ 906 (1452)
T PTZ00297 862 LLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR----PIIAIVSPNR 906 (1452)
T ss_pred eECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----ceEEEEEeCH
Confidence 995 8999999999999999999999999996553 3899998763
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.8e-44 Score=354.08 Aligned_cols=288 Identities=28% Similarity=0.408 Sum_probs=247.5
Q ss_pred CCCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEE-
Q 041055 204 QLTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVV- 282 (526)
Q Consensus 204 ~~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~- 282 (526)
...++++++++|||||||.||+|+++|+++..........+ ...++++..+|++|.+|+ ..++.++..|+++++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~----~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~ 105 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL----GGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVEL 105 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc----CCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEec
Confidence 34568999999999999999999999999988776654433 345788999999999998 566778888888877
Q ss_pred --ecCCCHHHHHHHHHhcC--ccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccc
Q 041055 283 --MQRFDLQAMIEAIKTYQ--VNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYG 358 (526)
Q Consensus 283 --~~~~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG 358 (526)
...+++..+++.+++++ .++...+|..+..++........++++|.+++||+++++++.+++.+. ++++++.||
T Consensus 106 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG 183 (358)
T PRK07824 106 DVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYG 183 (358)
T ss_pred CcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEeccc
Confidence 34678999999999998 556677888888777654444678899999999999999999998864 789999999
Q ss_pred cccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCee
Q 041055 359 LTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWL 438 (526)
Q Consensus 359 ~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~ 438 (526)
+||++..+. ..|.|.+++++++.| |||+++|+.++.||+++++.+ .|..+|||
T Consensus 184 ~TE~~~~~~-------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~ 236 (358)
T PRK07824 184 MSETSGGCV-------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWF 236 (358)
T ss_pred CCccCCCcC-------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccCCCce
Confidence 999865332 357899999999843 899999999999999988743 45567899
Q ss_pred eccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHH
Q 041055 439 KTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQV 518 (526)
Q Consensus 439 ~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l 518 (526)
+|||+|++ ++|.+++.||.||+||++|++|+|.|||++|.+||.|.+|+|++.+++..|+.++++|+..++...+.++|
T Consensus 237 ~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i 315 (358)
T PRK07824 237 RTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEAL 315 (358)
T ss_pred ecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHH
Confidence 99999999 89999999999999999999999999999999999999999999999989999999999887777888999
Q ss_pred HHHHHhcC
Q 041055 519 MQFVTSQL 526 (526)
Q Consensus 519 ~~~l~~~l 526 (526)
+++++++|
T Consensus 316 ~~~~~~~l 323 (358)
T PRK07824 316 RAHVARTL 323 (358)
T ss_pred HHHHHhhC
Confidence 99998875
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-42 Score=368.42 Aligned_cols=409 Identities=22% Similarity=0.264 Sum_probs=334.7
Q ss_pred CChhhhhcccCCCCCCCCCceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHc
Q 041055 48 LDTATCVLSRFPHPDLAESRVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSL 127 (526)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~ 127 (526)
.+++..+... +...| ++.|++.. +..+||+|+..++.++|+.|.+ .|++++++|+++++++++++++++|++++
T Consensus 227 ~~i~~~f~~~-a~~~p--~~~a~~~~--~~~lty~el~~~a~~la~~l~~-~g~~~~~~V~i~~~rs~~~i~~~l~ilka 300 (642)
T COG1020 227 LTIHLLFEEQ-AATTP--DAVALVRG--GQQLTYAELDARANRLARLLIS-LGVGPGETVAILADRSLELVVALLAVLKA 300 (642)
T ss_pred chHHHHHHHH-HHhCC--CceeEecC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCCHHHHHHHHHHHhc
Confidence 4677777777 66777 67888874 7899999999999999999998 89999999999998899999999999999
Q ss_pred CCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCC
Q 041055 128 GAILSPANSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQ 207 (526)
Q Consensus 128 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (526)
|+.++|++|.++.+++.+++++++++.+++............. +..+.. ... ............+
T Consensus 301 G~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------~~~-~~~~~~~~~~~~~ 365 (642)
T COG1020 301 GAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--LALDDA------------LSE-IPDTDPIPQALLG 365 (642)
T ss_pred CCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--cccccc------------ccc-CCccCcccccCCC
Confidence 9999999999999999999999999999998332221111110 111110 000 0000000113355
Q ss_pred CCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC--
Q 041055 208 DDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR-- 285 (526)
Q Consensus 208 ~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-- 285 (526)
++.+|++|||||||+||||..+|+++.+...+....+. ....|+++...++.+.... ..++.++..|+++++.+.
T Consensus 366 ~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~--~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~~~~~~~ 442 (642)
T COG1020 366 DALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFG--LDADDRVLALASLSFDASV-FEIFGALLEGARLVLAPALL 442 (642)
T ss_pred CCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcC--CCcccEEeecCCcccchhH-HHHHHHHhCCCEEEecCccc
Confidence 89999999999999999999999999997777666655 6778889888888555555 678889999999998863
Q ss_pred -CCHHHHHHHHHhcCccEeecccHHHHHHHhhc---cCCCCCCCceEEEEecCCCCHHHHHHHHHhCC-CCceeeccccc
Q 041055 286 -FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC---KDSSYLTSLRRVGSGAAPLSKELADEFRAKFP-WVELRQGYGLT 360 (526)
Q Consensus 286 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~-~~~l~~~yG~t 360 (526)
.++..+.+.+.++++|.+..+|..+..++... ........+|.+++||+.++..+...+....+ ...+.+.||.|
T Consensus 443 ~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpT 522 (642)
T COG1020 443 QVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPT 522 (642)
T ss_pred cCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCcc
Confidence 58899999999999999999999999998762 22233345999999999999999999988765 57899999999
Q ss_pred cccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeec
Q 041055 361 ESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKT 440 (526)
Q Consensus 361 E~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~T 440 (526)
|+............... ..++|+|.+|..+.|+| +.++++|.|..||+++.|.++.+||+++++.|.++|..+.+|+|
T Consensus 523 e~~~~~~~~~~~~~~~~-~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~t 600 (642)
T COG1020 523 EATLDAPSFPISAELES-RVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRT 600 (642)
T ss_pred HHhhheeeEEcccccCC-CCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccC
Confidence 97665554332222221 45899999999999999 78999999999999999999999999999999999965458999
Q ss_pred cceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCC
Q 041055 441 GDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHP 482 (526)
Q Consensus 441 GD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~ 482 (526)
||++++.+||.+.++||.|+++|++|++|.+.|||..+.++|
T Consensus 601 gD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 601 GDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred CCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 999999999999999999999999999999999999998875
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=9.7e-38 Score=307.24 Aligned_cols=266 Identities=21% Similarity=0.203 Sum_probs=213.5
Q ss_pred CCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCCC
Q 041055 208 DDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRFD 287 (526)
Q Consensus 208 ~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~ 287 (526)
++.++++|||||||.||+|++||+++.+.+......++....+.+++++.+|++|++|+...++.++..|+++++...++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 45789999999999999999999999988877666665333445789999999999998777788889999999998899
Q ss_pred HHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceee
Q 041055 288 LQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATT 367 (526)
Q Consensus 288 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~ 367 (526)
+..+++.++.+ |+++++|++++.|.+. ...+++++. ++||+++++++.+.+++. +...+++.||+||+++++.
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~---~~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~ 247 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADL---DYRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGL 247 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhh---CcCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccccc
Confidence 98888888654 8999999999999774 245677876 678999999999999886 2346999999999987544
Q ss_pred cccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEc
Q 041055 368 FMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFD 447 (526)
Q Consensus 368 ~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~ 447 (526)
... ++..|.+.|++++.+ + ++. + .|+ ..|++|||++++|
T Consensus 248 ~~~--------~~~~~~~~p~~~~~~-~--~~~--------~---~g~-------------------~~~~~tgD~g~~d 286 (386)
T TIGR02372 248 REA--------PDDPFRLLPDLACFA-D--TLS--------S---AGL-------------------ARRLDLQDRLAWD 286 (386)
T ss_pred ccC--------CCCCcccCCCccccC-C--Ccc--------C---CCc-------------------cceeecCceEEEc
Confidence 311 334567788766543 1 111 0 011 2368999999999
Q ss_pred CCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCC--HHHHHHHHHhc
Q 041055 448 GEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLT--EDQVMQFVTSQ 525 (526)
Q Consensus 448 ~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~--~~~l~~~l~~~ 525 (526)
++|+|++.||+||+||++|++|+|.+||++|.+||+|.+++|+. .+++++|+|+++++...+ .++|+++++++
T Consensus 287 ~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~~~~l~~~~~~~ 361 (386)
T TIGR02372 287 KDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAELEIELRATAARH 361 (386)
T ss_pred CCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999863 367899999988765433 46888888876
Q ss_pred C
Q 041055 526 L 526 (526)
Q Consensus 526 l 526 (526)
|
T Consensus 362 L 362 (386)
T TIGR02372 362 L 362 (386)
T ss_pred C
Confidence 5
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=8.2e-37 Score=308.43 Aligned_cols=302 Identities=20% Similarity=0.213 Sum_probs=226.1
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhh-hcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWT-VDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~-~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
+.++++++++||||||.||++.++|.++.......... ...+..++|++++..++.+..+.....+.+...|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 45678899999999999999999999987654433222 12236788998887665443333234556777899998887
Q ss_pred CCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCC--CCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccccc
Q 041055 285 RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDS--SYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTE 361 (526)
Q Consensus 285 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~--~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE 361 (526)
..+++.+++.|+++++|+++++|+++..|++.. ... ....++|.++++|+++++++.+.+++.| ++++++.||+||
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~tE 231 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLSE 231 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccchh
Confidence 778899999999999999999999999998762 222 2235899999999999999999999999 689999999999
Q ss_pred ccc-eeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeec
Q 041055 362 SCG-ATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKT 440 (526)
Q Consensus 362 ~~~-~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~T 440 (526)
+++ .+...+. . ...+ ...+.+++.++|+|+++++++++|+.|||++++. +.+.| +.+||+|
T Consensus 232 ~~~~~~~~~~~-~---~~~g-~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~------------~~~~~-p~~ry~T 293 (422)
T TIGR02155 232 VIGPGVAMECV-E---TQDG-LHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL------------TKEAL-PVIRYRT 293 (422)
T ss_pred hcCCceeeccc-c---cCCC-ceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC------------Ccccc-ceeeEEc
Confidence 853 2221110 0 0011 1222346788999988899999999999999973 23334 5679999
Q ss_pred cceEEEcCC-C-----cEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCC-
Q 041055 441 GDLCYFDGE-G-----FLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQL- 513 (526)
Q Consensus 441 GD~~~~~~~-G-----~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~- 513 (526)
||+++++++ | .+++.||.||+||++|.+|+|.+||.+|.+||.|...+.+........+.++++|+..++...
T Consensus 294 GDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~ 373 (422)
T TIGR02155 294 RDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTL 373 (422)
T ss_pred CcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccc
Confidence 999999876 4 468999999999999999999999999999999984444444444444567777777654321
Q ss_pred C--------HHHHHHHHHhcC
Q 041055 514 T--------EDQVMQFVTSQL 526 (526)
Q Consensus 514 ~--------~~~l~~~l~~~l 526 (526)
. .++|++++++++
T Consensus 374 ~~~~~~~~~~~~i~~~~~~~~ 394 (422)
T TIGR02155 374 RLHEQASLLAGEIQHTIKQEV 394 (422)
T ss_pred cchHHHHHHHHHHHHHHHhcc
Confidence 1 356777777653
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.98 E-value=2.5e-30 Score=261.23 Aligned_cols=297 Identities=15% Similarity=0.110 Sum_probs=209.7
Q ss_pred CCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 205 LTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 205 ~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
.+.++++.+++||||||.||++.+||.++..........+ ..++.++|+++...+..+..+.....+.+...|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 3456889999999999999999999999887655443332 224678899999888776655534456667788877654
Q ss_pred cCCCHHHHHHHHHhcCccEeecccHHHHHHHhhc-cCC--CCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccc
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYC-KDS--SYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLT 360 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~--~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~t 360 (526)
.. ....++.|++++++.+.++|+.+..|++.. ... ....++|.+++||+++++++.+.+++.| ++++++.||+|
T Consensus 163 ~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~T 239 (445)
T TIGR03335 163 GK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGST 239 (445)
T ss_pred Cc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChh
Confidence 42 356789999999999999999988887652 222 2346899999999999999999999998 79999999999
Q ss_pred cccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeec
Q 041055 361 ESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKT 440 (526)
Q Consensus 361 E~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~T 440 (526)
|++. +..+.. ......+.+.+.++|+|++++.++++|+.|||++++..-.. +.+.+ +---|+|
T Consensus 240 E~~~-~~~c~~-------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~--------~r~~~-PliRYrt 302 (445)
T TIGR03335 240 EGTM-CGECQA-------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPG--------ERCGS-LLINYDT 302 (445)
T ss_pred hhhh-eEEecC-------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCC--------ccCCc-eEEEeec
Confidence 9853 222211 11233344678899999988999999999999999743210 00000 1113999
Q ss_pred cceEEEcC-C----C----cEEEEccccceEEecCeeeChHHHHHHHhcC---CCcc-cEEEEeeeCCCCCceEEEEEEe
Q 041055 441 GDLCYFDG-E----G----FLYIVDRIKELIKHNGYQVAPAELEAVLLSH---PNIL-DAAVIPLEDEEAGQIPMAYVVR 507 (526)
Q Consensus 441 GD~~~~~~-~----G----~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~---~~v~-~~~vv~~~~~~~~~~~~a~vv~ 507 (526)
||++++.. + | ++...||.||+++++|.+|+|.+||++|.++ +++. +..++...+......+...|..
T Consensus 303 gD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~ 382 (445)
T TIGR03335 303 EDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRVSLEC 382 (445)
T ss_pred CceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEEEEEe
Confidence 99999732 2 2 2455799999999999999999999999995 5554 4445543332222345555666
Q ss_pred CCCCCCCHHHHHHH
Q 041055 508 AAGSQLTEDQVMQF 521 (526)
Q Consensus 508 ~~~~~~~~~~l~~~ 521 (526)
.++.....+++.+.
T Consensus 383 ~~~~~~~~~~~~~~ 396 (445)
T TIGR03335 383 EDKDNCSIHDIQEN 396 (445)
T ss_pred cCcccchHHHHHHH
Confidence 55433333343333
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=1e-28 Score=250.76 Aligned_cols=480 Identities=17% Similarity=0.212 Sum_probs=335.3
Q ss_pred cchhhhCCCCCCCCCCCCCCCCCceeecCCCCCCCCCCCCCCCCChhhhhcccCCCCCCCCCceEEEeCC----CCceeC
Q 041055 5 ISEEQTGKSSGSKFPNSGFDSETGIYHSLIQLGENYRIPTRTDLDTATCVLSRFPHPDLAESRVALIDSA----THERVT 80 (526)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~----~~~~~T 80 (526)
+|.+..-+.|+.+-+++.++.+..+++... . +.-.++.+++..+ ++..| +.+|+.... +..++|
T Consensus 736 As~~~~nivs~~rlq~s~~~d~~~~~d~~~------~---~kl~~ile~Lq~R-~a~tp--~~~a~~~~n~~~~~~~~~T 803 (1363)
T KOG3628|consen 736 ASVMVGNIVSGKRLQQSGGRDRGNIVDNDS------E---RKLLTILEILQWR-AAKTP--DHIAFTTLNARGATKKTLT 803 (1363)
T ss_pred HHHHHHhhhcchhhhhcccccccccccchh------h---hHHHHHHHHHHHH-hhcCC--CceEEEEeccCCcccceeE
Confidence 455555566677777676655544444222 0 1116788888888 67777 688887532 357899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCC------CHHHHHHHHHhcCCeE
Q 041055 81 YAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSIN------TESEIVKQVRDSGAKL 154 (526)
Q Consensus 81 y~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~ 154 (526)
|++|..++.+++..|..+.-+++||.|++++++++|++++++||+.+|++++|+.|-- ....+..+++..++..
T Consensus 804 w~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~a 883 (1363)
T KOG3628|consen 804 WAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAA 883 (1363)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhhe
Confidence 9999999999999999866799999999999999999999999999999999998753 3567889999999999
Q ss_pred EEEcchhHHHhhc---------CCCCEEEEcCCCCCCCcchHHHHh-hhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCch
Q 041055 155 IISASEELQKLTK---------VNVPIIVTSRDQSNNKSVSVEELI-ECCDAADELPGCQLTQDDTAAILYSSGTTGTSK 224 (526)
Q Consensus 155 ii~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK 224 (526)
|+++......++. ..+|.++.-++... . +.... +........+.....++.+|++-|.--++|.--
T Consensus 884 ilv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~-t---~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~ 959 (1363)
T KOG3628|consen 884 ILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE-T---IRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLI 959 (1363)
T ss_pred EEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch-h---hhhhhhhhhccCCCCCccccCCCceEEEEEEecCCccee
Confidence 9999876655542 22333332222110 0 11110 011111111222446688999999888999999
Q ss_pred HHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC----CCHHHHHHHHHhcCc
Q 041055 225 GVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR----FDLQAMIEAIKTYQV 300 (526)
Q Consensus 225 ~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~ 300 (526)
++.++|..+++........+. +.+..-++...+.+...|+..+++..++.|.+.++.++ .++..+++.|+++++
T Consensus 960 ~~~msHsslla~Ck~iKe~~~--l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kv 1037 (1363)
T KOG3628|consen 960 GVKMSHSSLLAFCKIIKETCQ--LYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKV 1037 (1363)
T ss_pred eeeccHHHHHHHHHHHHHHHc--cccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccc
Confidence 999999999999888888877 56677777778888888888889999999999888764 478899999999999
Q ss_pred cEeecccHHHHHHHhh-ccCCC-------CCCCceEEEEecCCCCHHHHHHHHHhCCCC-----ceeeccccccccceee
Q 041055 301 NNIPLVPPVILGLVKY-CKDSS-------YLTSLRRVGSGAAPLSKELADEFRAKFPWV-----ELRQGYGLTESCGATT 367 (526)
Q Consensus 301 t~~~~~P~~~~~l~~~-~~~~~-------~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~-----~l~~~yG~tE~~~~~~ 367 (526)
.-++.+-..+..+.+. ..+.. ++++ ..++..-+.....+.+.+.+.|... .+...|++-=--.++.
T Consensus 1038 kDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~ 1116 (1363)
T KOG3628|consen 1038 KDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICL 1116 (1363)
T ss_pred cccchhHHHHHHHHhccccccchhhhhhccccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhh
Confidence 9998887777777655 22222 2222 3344445555567777777766211 1222333221111111
Q ss_pred c---ccCc-------cc--------------ccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCC
Q 041055 368 F---MVSP-------KQ--------------ARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFG 423 (526)
Q Consensus 368 ~---~~~~-------~~--------------~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~ 423 (526)
. .+++ .. ....--..|...+++++.|++||+..+|.+|+.||||+.|.+-+.+|+.
T Consensus 1117 r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~ 1196 (1363)
T KOG3628|consen 1117 RSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFT 1196 (1363)
T ss_pred ccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCCcceEEeccccccccccc
Confidence 0 0000 00 0000123588899999999999999999999999999999988888774
Q ss_pred CH-HHHhccc---------CCCCeeeccceEEEc------CC----CcEEEEccccceEEecCeeeChHHHHHHHhc-CC
Q 041055 424 NE-EATAAAF---------DEDGWLKTGDLCYFD------GE----GFLYIVDRIKELIKHNGYQVAPAELEAVLLS-HP 482 (526)
Q Consensus 424 ~~-~~t~~~~---------~~~~~~~TGD~~~~~------~~----G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~-~~ 482 (526)
-. +.....| ...+|-||||+|++. .+ ..||++|-.++.+.++|.+.+|.+||..+.. ||
T Consensus 1197 ~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~ 1276 (1363)
T KOG3628|consen 1197 IGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHP 1276 (1363)
T ss_pred cCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcc
Confidence 21 1222222 244699999999984 22 2599999999999999999999999997665 79
Q ss_pred CcccEEEEeeeCCCCCceEEEEEEeC
Q 041055 483 NILDAAVIPLEDEEAGQIPMAYVVRA 508 (526)
Q Consensus 483 ~v~~~~vv~~~~~~~~~~~~a~vv~~ 508 (526)
.|.+|+|+.... .+|..++..
T Consensus 1277 ~I~~cavF~~~g-----lvVvviE~~ 1297 (1363)
T KOG3628|consen 1277 SIGGCAVFQATG-----LVVVVIECH 1297 (1363)
T ss_pred cccceeeEeeCC-----eEEEEEEec
Confidence 999999997543 345555544
No 126
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.96 E-value=1.2e-27 Score=228.88 Aligned_cols=284 Identities=23% Similarity=0.249 Sum_probs=220.3
Q ss_pred CCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCCh-hHHHHHHHHHHhhcccCcEEEE
Q 041055 205 LTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPM-FHIYGLAFFATGLFCCGVTIVV 282 (526)
Q Consensus 205 ~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~ 282 (526)
...++...|..||||||+|+.+.+++..+......+...+ ..+...+|++...... .+..|+ ...+++-..|++++-
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~-~~~~ga~rig~~vip 165 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGL-GLHYGAERIGATVIP 165 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCc-hhHHHHHhhCEEEEc
Confidence 3446677788999999999999999999887766655444 3346778877665542 122222 334455557888887
Q ss_pred ecCCCHHHHHHHHHhcCccEeecccHHHHHHHhhccC---CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeecccc
Q 041055 283 MQRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD---SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGL 359 (526)
Q Consensus 283 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~ 359 (526)
...-+.+..+++++.+++|++.++|+.+..|++...+ ...-.++|.+++|+|++++++.+.+.++| ++..++.||+
T Consensus 166 ~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGl 244 (438)
T COG1541 166 ISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGL 244 (438)
T ss_pred cCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeecccc
Confidence 7666889999999999999999999999999988322 34556899999999999999999999999 8999999999
Q ss_pred ccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeee
Q 041055 360 TESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLK 439 (526)
Q Consensus 360 tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~ 439 (526)
||..+.....+.. ......+.++..++|+||++++++++|+.|||+++.-. ++.+ +---|+
T Consensus 245 tE~~g~g~~eC~~------~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~------------~~~~-PlIRYr 305 (438)
T COG1541 245 TEGFGPGAGECTE------RNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT------------KEGM-PLIRYR 305 (438)
T ss_pred ccccCCccccccc------ccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc------------ccCc-ceEEEE
Confidence 9997664211111 11344566889999999999999999999999999732 1111 122499
Q ss_pred ccceEEEcCC----Cc-----EEEEccccceEEecCeeeChHHHHHHHhcCCCcc-cEEEEeeeCCCCCceEEEEEEeCC
Q 041055 440 TGDLCYFDGE----GF-----LYIVDRIKELIKHNGYQVAPAELEAVLLSHPNIL-DAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 440 TGD~~~~~~~----G~-----l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~-~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
|||+..+.++ |+ -.|.||.||++++.|.+|+|..||.+|.+.+.+. +..++... +.....+.+.|+..+
T Consensus 306 tgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~vE~~~ 384 (438)
T COG1541 306 TGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRVELEN 384 (438)
T ss_pred cCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEEEecC
Confidence 9999999764 32 5689999999999999999999999999999999 88888776 444566777777776
Q ss_pred C
Q 041055 510 G 510 (526)
Q Consensus 510 ~ 510 (526)
+
T Consensus 385 ~ 385 (438)
T COG1541 385 E 385 (438)
T ss_pred c
Confidence 4
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.95 E-value=1.2e-26 Score=243.36 Aligned_cols=434 Identities=18% Similarity=0.179 Sum_probs=280.0
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCC----HHHHHHHH---Hh
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINT----ESEIVKQV---RD 149 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~----~~~l~~~l---~~ 149 (526)
..+||.+....+..+++.|.. .|...|+.|++++..+.++++..++++++|..+.+++|.++ .+++..+. ..
T Consensus 68 ~~~t~r~~~~~~n~~~q~l~~-~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s 146 (1032)
T KOG1178|consen 68 DSFTYRLIRLLSNIIAQFLVS-LGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTS 146 (1032)
T ss_pred cchhhhhhhcccchhHHHhhh-cccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhhee
Confidence 579999999999999999988 99999999999999999999999999999999999999999 33222221 11
Q ss_pred cCCeEEEEcchhHHHhh-cCCCCEEEEcCCCCCCCcchHHHHhhhcCCCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHh
Q 041055 150 SGAKLIISASEELQKLT-KVNVPIIVTSRDQSNNKSVSVEELIECCDAADELPGCQLTQDDTAAILYSSGTTGTSKGVIL 228 (526)
Q Consensus 150 ~~~~~ii~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~ 228 (526)
....+ ......-.+. ..-.+...+ ......+..... ...........++..+++.||||+||.||+|.-
T Consensus 147 ~~~~i--~~~l~i~~~~~~~~~~~~sv-----~~~~~~f~~~~~---~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~ 216 (1032)
T KOG1178|consen 147 VELEI--VRRLNIIDILLNSLFPKLSV-----ETIADSFQMVLH---NEDTREIRVGGNDSTALLSFTSGSTGVPKGVAG 216 (1032)
T ss_pred cccee--hhhhhhHHHHhhccccccch-----hhccchhhhhhc---cCCCcceeeecccccceEeecccccccccccch
Confidence 11111 1111110000 000000000 000001111110 001111113456778999999999999999999
Q ss_pred hhHHHHHHHHHHhhhhcccCCCCcEEEEeCCh-hHHHHHHHHHHhhcccCcEEEEecC---CCHHHHHHHHHhcCccEee
Q 041055 229 THANFISIMQLLRWTVDVTHAQNDIFLCMIPM-FHIYGLAFFATGLFCCGVTIVVMQR---FDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 229 sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~ 304 (526)
+|..+.....+....+. +...+.+-..... ++..-. ....+.++.|..+..+.. .++..+.+.+++++++..+
T Consensus 217 ~~~sl~~~fdw~~~~f~--~t~s~~~~~~~~~~~~d~i~-~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~ 293 (1032)
T KOG1178|consen 217 THFSLANAFDWMFTTFP--PTGSDRFTFKTSVYFDDTIQ-KFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSH 293 (1032)
T ss_pred hHHHHHhhhhhccccCC--cCccchhhhhheeecccchH-HHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeee
Confidence 99999988877766655 4444443111111 121111 334456666776666643 2478999999999999999
Q ss_pred cccHHHHHHHhhccC--------------CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccceeeccc
Q 041055 305 LVPPVILGLVKYCKD--------------SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCGATTFMV 370 (526)
Q Consensus 305 ~~P~~~~~l~~~~~~--------------~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 370 (526)
.+|++.++++..... ....+.|+....+|++....+...+.+.+...-...-|+.++..+......
T Consensus 294 ~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~ 373 (1032)
T KOG1178|consen 294 LLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDD 373 (1032)
T ss_pred echhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHh
Confidence 999998887765111 122357999999999999999987777765444445589998877666432
Q ss_pred Cccccc-CCCCcccccCC-------CcEEEEEeCCCCccCCCCCcceEEEe----ccccccccCCCHHHHhccc-----C
Q 041055 371 SPKQAR-ARSGSCGALSP-------TFYAKVVDTETRLALPPYQRGELWLK----SPTIMRGYFGNEEATAAAF-----D 433 (526)
Q Consensus 371 ~~~~~~-~~~~~~G~~~~-------~~~~~ivd~~~~~~~~~g~~Gel~v~----~~~~~~gy~~~~~~t~~~~-----~ 433 (526)
-..... .....+..+.. ....+... ..+.+.+.++.+..... +..+..| +..++.....+ .
T Consensus 374 ~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~ 451 (1032)
T KOG1178|consen 374 FSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGV 451 (1032)
T ss_pred hCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccc
Confidence 111000 00000111000 01112222 22333333332222222 2333334 23333323222 2
Q ss_pred CCCeeeccceEEEcCCCcEEEEccccceEEecCeeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCC
Q 041055 434 EDGWLKTGDLCYFDGEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQL 513 (526)
Q Consensus 434 ~~~~~~TGD~~~~~~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~ 513 (526)
.+.+|+|||.|+.-++|.+.+.||.|++||.+|.|+...||+.++..+|.|.++.+....+...++.++|||+.+.+.+.
T Consensus 452 ~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~ 531 (1032)
T KOG1178|consen 452 KARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS 531 (1032)
T ss_pred hhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc
Confidence 34589999999999999999999999999999999999999999999999999999999998889999999998876543
Q ss_pred -CHHHHHHHHHhcC
Q 041055 514 -TEDQVMQFVTSQL 526 (526)
Q Consensus 514 -~~~~l~~~l~~~l 526 (526)
...+|++|++++|
T Consensus 532 ~~~~~i~~~l~~~L 545 (1032)
T KOG1178|consen 532 VLIRDIRNYLKKEL 545 (1032)
T ss_pred hhHHHHHHhhcccc
Confidence 4578999888764
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=1e-25 Score=205.50 Aligned_cols=210 Identities=15% Similarity=0.109 Sum_probs=158.0
Q ss_pred CCCCCCCCceEEEeC-C---CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccC
Q 041055 59 PHPDLAESRVALIDS-A---THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPA 134 (526)
Q Consensus 59 ~~~~~~~~~~a~~~~-~---~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 134 (526)
++.+| +++|++.. + +++++||+||.+++.++|++|.+.+|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 6 ~~~~p--~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~ 83 (227)
T TIGR03089 6 LAADP--ASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLA 83 (227)
T ss_pred hhhCC--CCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeC
Confidence 44555 78998742 2 245799999999999999999852599999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEcchhHHHhhcCCCCEEEEc-----C--C-CCCCCcchHHHHhhhcCCCCCCCCCCCC
Q 041055 135 NSINTESEIVKQVRDSGAKLIISASEELQKLTKVNVPIIVTS-----R--D-QSNNKSVSVEELIECCDAADELPGCQLT 206 (526)
Q Consensus 135 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~i~~~-----~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (526)
+ ++++++++++++....+... ..++.+. . . .....+.++.+....... ...+.+...
T Consensus 84 n-------------~s~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 148 (227)
T TIGR03089 84 G-------------DPDADVVVTGPDRLAAAAGS-GEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD-QFAPYEPPD 148 (227)
T ss_pred C-------------CCCCCEEEeCcchhhhcccC-CceEEEeccccccCCCCCCCCcccchhhhhhccCC-CCCCCCCCC
Confidence 6 67899999998876665422 2233321 1 0 112233344443332111 111111345
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecCC
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQRF 286 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~ 286 (526)
++|++.++||||+ +|+++.... ...+ +.++|+++ .+|++|++|+...++.++..|++++++++|
T Consensus 149 ~~D~a~l~yTsg~---------~~~~~~~~~----~~~~--l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rF 212 (227)
T TIGR03089 149 ATAPALVAGGGEW---------TGAELVAAA----RAAG--LPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHP 212 (227)
T ss_pred CCcceeeeccccc---------cHHHHHHHH----hhcC--CCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCC
Confidence 6899999999985 566655443 2223 67899999 999999999988899999999999999999
Q ss_pred CHHHHHHHHHhcCcc
Q 041055 287 DLQAMIEAIKTYQVN 301 (526)
Q Consensus 287 ~~~~~~~~i~~~~~t 301 (526)
++..+++.|+++|+|
T Consensus 213 d~~~~l~~i~~~~vT 227 (227)
T TIGR03089 213 DPARLDQIAETERVT 227 (227)
T ss_pred CHHHHHHHHHhhcCC
Confidence 999999999999987
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.78 E-value=1.4e-17 Score=170.49 Aligned_cols=417 Identities=14% Similarity=0.200 Sum_probs=284.5
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--CchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNS--LLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
..+||..+..++.++|+.-+.+-|+.++|+|.++...+ .|+++..++|..+|.+++|+++..+.+++..+++....++
T Consensus 123 ~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~ 202 (1363)
T KOG3628|consen 123 TSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERV 202 (1363)
T ss_pred eeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccce
Confidence 57999999999999999444448999999999998776 8999999999999999999999999999999999999999
Q ss_pred EEEcchhHHHhhcCCCCEEEEcCCCCCCCcchHHHHhhhcC----CCCCCCCCCCCCCCEEEEEcCCCCCCCchHHHhhh
Q 041055 155 IISASEELQKLTKVNVPIIVTSRDQSNNKSVSVEELIECCD----AADELPGCQLTQDDTAAILYSSGTTGTSKGVILTH 230 (526)
Q Consensus 155 ii~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~sh 230 (526)
+++.............+. .......|....+... .....| ...-. .++|-||++++|.--|++++|
T Consensus 203 ~l~t~a~~r~~~~~~~~~-------s~~k~v~~w~t~~~k~~~~~~k~~~P--~~~~~-~~~i~~t~s~l~~~~g~V~~~ 272 (1363)
T KOG3628|consen 203 ALTTEAGERAFINDNSPV-------SLAKAVAWWKTNDFKGNYTKDKIKKP--RMQLP-YGYIEFTRSPLGNLIGVVYKH 272 (1363)
T ss_pred EeehhhhHHHhhhccCcc-------cHHHHHHhhhcccccceeehhhccCC--ceeee-eEEEEEeccchhceeeeEeec
Confidence 999877655543222110 0000000100000000 001111 12222 889999999999999999999
Q ss_pred HHHHHHHHHHhh-----------hh-------cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEecC---CCHH
Q 041055 231 ANFISIMQLLRW-----------TV-------DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQR---FDLQ 289 (526)
Q Consensus 231 ~~l~~~~~~~~~-----------~~-------~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~ 289 (526)
+ ++.+.+.+.. .+ .+.....+.++.........|+++.++.+++.|.+.+..++ ..+.
T Consensus 273 ~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG 351 (1363)
T KOG3628|consen 273 K-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPG 351 (1363)
T ss_pred c-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCc
Confidence 8 5554433211 11 01234567777777777888888889999999999998876 6778
Q ss_pred HHHHHHHhcCccEeecccHHHHHHHhh------------ccCCCCCCCceEEEEecCCCCHHHHHHHHHhC----CCCce
Q 041055 290 AMIEAIKTYQVNNIPLVPPVILGLVKY------------CKDSSYLTSLRRVGSGAAPLSKELADEFRAKF----PWVEL 353 (526)
Q Consensus 290 ~~~~~i~~~~~t~~~~~P~~~~~l~~~------------~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~----~~~~l 353 (526)
.+.+++.+++++++..-...+.+.... .....+++++|.+++.-..++.+..+-..+++ +...+
T Consensus 352 ~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~ 431 (1363)
T KOG3628|consen 352 LIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNV 431 (1363)
T ss_pred chhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCc
Confidence 899999999999988765444443322 01235789999999999999998877666554 11111
Q ss_pred eec-----------------cccccccceeecccCc---------------------------ccccCCCCcccccCCC-
Q 041055 354 RQG-----------------YGLTESCGATTFMVSP---------------------------KQARARSGSCGALSPT- 388 (526)
Q Consensus 354 ~~~-----------------yG~tE~~~~~~~~~~~---------------------------~~~~~~~~~~G~~~~~- 388 (526)
... =+++|.+......+.. .........+|+..||
T Consensus 432 ~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~ 511 (1363)
T KOG3628|consen 432 KVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGD 511 (1363)
T ss_pred ceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccc
Confidence 111 2233443322211110 0000012335665554
Q ss_pred cEEEEEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccC------------CCCeeeccceEEEcCCCcEEEEc
Q 041055 389 FYAKVVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFD------------EDGWLKTGDLCYFDGEGFLYIVD 456 (526)
Q Consensus 389 ~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~------------~~~~~~TGD~~~~~~~G~l~~~G 456 (526)
+.+.++++++...|.++++|||||.++++..+||.-+..|...|. ...|.|||-+|++.+ |.+|++|
T Consensus 512 ~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~-gki~vl~ 590 (1363)
T KOG3628|consen 512 ATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHN-GKIYVLG 590 (1363)
T ss_pred eEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeeeC-CeEEEEE
Confidence 566778889999999999999999999999999988777777761 224899999999985 5566666
Q ss_pred cccceEE-ecCeeeChHH----------HHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCC
Q 041055 457 RIKELIK-HNGYQVAPAE----------LEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGS 511 (526)
Q Consensus 457 R~~d~ik-~~G~~v~~~e----------IE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~ 511 (526)
-.+|++. +.|.+.+..+ |+.+.+..+.|-++.++- .|+.+..++-+|..
T Consensus 591 ~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~------~E~~~Vv~~esP~a 650 (1363)
T KOG3628|consen 591 LKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE------DEHIVVVVLESPDA 650 (1363)
T ss_pred echhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee------cceEEEEEEeCcch
Confidence 5555554 6787776555 445566678888888885 35555555555543
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.76 E-value=1.1e-16 Score=158.30 Aligned_cols=244 Identities=16% Similarity=0.102 Sum_probs=158.7
Q ss_pred EEEEEcCCCCCCCchHHHhhhHHHHHHHH-HHhhhhcccCCCCcEEEEe--CChhHHHHHHHHHHhhcccCcEEEEec-C
Q 041055 210 TAAILYSSGTTGTSKGVILTHANFISIMQ-LLRWTVDVTHAQNDIFLCM--IPMFHIYGLAFFATGLFCCGVTIVVMQ-R 285 (526)
Q Consensus 210 ~a~i~~TSGTTG~PK~v~~sh~~l~~~~~-~~~~~~~~~~~~~~~~l~~--~p~~~~~g~~~~~~~~l~~G~~~v~~~-~ 285 (526)
-..+..||||||.|-.+..+......... ........+...++++... .+. +.+.. +... ...+-..+ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly~~---~~~~---~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLYQS---VNNR---WISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHHHH---HHhc---cceeeecCCC
Confidence 34567799999999999888876543322 2222222223444444333 221 22221 1111 11111121 1
Q ss_pred CCHHHHHHHHHhcCccEeecccHHHHHHHhhccC-CCCCCCceEEEEecCCCCHHHHHHHHHhCCCCceeeccccccccc
Q 041055 286 FDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKD-SSYLTSLRRVGSGAAPLSKELADEFRAKFPWVELRQGYGLTESCG 364 (526)
Q Consensus 286 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~~yG~tE~~~ 364 (526)
.+.+.+++.|++++|+++.+.|+.+..|++...+ ..+ .+++.++++||.++++..+.+++.| ++++++.||+|| +.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GF 250 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hh
Confidence 4689999999999999999999999999987332 223 4799999999999999999999999 799999999999 54
Q ss_pred eeecccCcccccCCCCcccccCCCcEEE--EEeCCCCccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccc
Q 041055 365 ATTFMVSPKQARARSGSCGALSPTFYAK--VVDTETRLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGD 442 (526)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~--ivd~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD 442 (526)
++..|. .+.+..-...+.++ ++|++ ++ ++.+|++-.- ..+ +=--|+|||
T Consensus 251 la~eC~--------~g~lHl~ed~~~vE~~ivD~~-~~-------~~~ViT~L~n------------~~~-PlIRYrtGD 301 (430)
T TIGR02304 251 LASTCR--------CGTLHLNEDLVHIEKQYLDEH-KR-------FVPIITDFTR------------TTQ-PIVRYRLND 301 (430)
T ss_pred eEEecC--------CCCEEEccccEEEEeeEECCC-Cc-------eEEEEecCCC------------ccc-eEEeeeCCC
Confidence 443332 22233333445566 78854 32 3456765211 000 111399999
Q ss_pred eEEEcCC----Cc----E-EEEccccceEEe---cCe--eeChHHHHHHHh-cCCCcccEEEEee
Q 041055 443 LCYFDGE----GF----L-YIVDRIKELIKH---NGY--QVAPAELEAVLL-SHPNILDAAVIPL 492 (526)
Q Consensus 443 ~~~~~~~----G~----l-~~~GR~~d~ik~---~G~--~v~~~eIE~~l~-~~~~v~~~~vv~~ 492 (526)
++.+.++ |. + .|.||.+|++++ +|. .|+|..++.++. ..+.|.+..++..
T Consensus 302 ~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~ 366 (430)
T TIGR02304 302 ILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT 366 (430)
T ss_pred EEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc
Confidence 9988544 32 3 388999999985 454 459999998744 5789999998864
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.65 E-value=7.1e-16 Score=148.92 Aligned_cols=85 Identities=25% Similarity=0.284 Sum_probs=79.1
Q ss_pred CCCeeeccceEEE-cCCCcEEEEccccceEEecC---eeeChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC
Q 041055 434 EDGWLKTGDLCYF-DGEGFLYIVDRIKELIKHNG---YQVAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 434 ~~~~~~TGD~~~~-~~~G~l~~~GR~~d~ik~~G---~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
.+|||+|||+|++ |+||+|+|.||.| +| ++|+|. ||++|.+||+|.+|+|++++++..|+.++|||++.+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 6899999999998 7999999999998 78 799999 999999999999999999999999999999999873
Q ss_pred CCCCCHHHHHHHHHhcC
Q 041055 510 GSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 510 ~~~~~~~~l~~~l~~~l 526 (526)
..+.++++++|+++|
T Consensus 281 --~~~~~el~~~l~~~L 295 (365)
T PRK09188 281 --PADEKSLRARLAGAK 295 (365)
T ss_pred --CCCHHHHHHHHHhhc
Confidence 467789999999886
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.34 E-value=1.7e-10 Score=111.76 Aligned_cols=231 Identities=18% Similarity=0.192 Sum_probs=140.8
Q ss_pred CCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcc--cCCCCc-EEEEeCChhH---HHHH-HHHHHhhcccC
Q 041055 205 LTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDV--THAQND-IFLCMIPMFH---IYGL-AFFATGLFCCG 277 (526)
Q Consensus 205 ~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~--~~~~~~-~~l~~~p~~~---~~g~-~~~~~~~l~~G 277 (526)
..++++..++.||||||.|--+.+.+..+..+...+...+.. ...... .++...|-.. ..+. ..........+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 345667788889999999866666666565554443333221 112222 2222233211 1111 11222333455
Q ss_pred cEEEEe-cCCCHHHHHHHHH----hcCccEeecccHHHHHHHhh-c--cCCCCCC-CceEEEEec------CCCC-HHHH
Q 041055 278 VTIVVM-QRFDLQAMIEAIK----TYQVNNIPLVPPVILGLVKY-C--KDSSYLT-SLRRVGSGA------APLS-KELA 341 (526)
Q Consensus 278 ~~~v~~-~~~~~~~~~~~i~----~~~~t~~~~~P~~~~~l~~~-~--~~~~~l~-~lr~v~~gG------~~l~-~~~~ 341 (526)
....+- ..++.+.+++.+. +.++..++++|.++..++.. . .....|+ ..+.+..|| +.++ +++.
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 553332 2467777776664 45788899999888877765 2 2233444 456666666 4575 5888
Q ss_pred HHHHHhCCC---CceeeccccccccceeecccCcccccCCCCcccccCCCcEEEEEeCCCCccCCCCCcceEEEeccccc
Q 041055 342 DEFRAKFPW---VELRQGYGLTESCGATTFMVSPKQARARSGSCGALSPTFYAKVVDTETRLALPPYQRGELWLKSPTIM 418 (526)
Q Consensus 342 ~~~~~~~~~---~~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gel~v~~~~~~ 418 (526)
+.+.+.|+- ..+++.|||||.......+.. +. ...|-. +.|.|+++.++++.|++|-|-+-.+...
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~--------~~--~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~ 314 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGH--------GH--FHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT 314 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCC--------Cc--ccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc
Confidence 888888832 379999999998654443211 11 123333 7777999999999999999988775432
Q ss_pred cccCCCHHHHhcccCCCCeeeccceEEEcCC--------CcEEEEccccc
Q 041055 419 RGYFGNEEATAAAFDEDGWLKTGDLCYFDGE--------GFLYIVDRIKE 460 (526)
Q Consensus 419 ~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~--------G~l~~~GR~~d 460 (526)
. .-+..-|.|+|.+..+ .++.++||.+.
T Consensus 315 -s-------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 315 -S-------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred -C-------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 1 2344779999988654 26999999875
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.75 E-value=2.8e-08 Score=102.05 Aligned_cols=177 Identities=15% Similarity=0.189 Sum_probs=102.1
Q ss_pred CCCceEEEEecCCCCHHHHHHHHHhCCCCc-eeeccccccccceeecccCcccccCCCCcccccCCC-cEEEEEeCCC--
Q 041055 323 LTSLRRVGSGAAPLSKELADEFRAKFPWVE-LRQGYGLTESCGATTFMVSPKQARARSGSCGALSPT-FYAKVVDTET-- 398 (526)
Q Consensus 323 l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~-l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~ivd~~~-- 398 (526)
.++|+.|.+.+..-...-.+.+++.+|++. +...|++||+.. ..+... ....+.+.++ .-.+.++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i--~i~~~~------~~~~~~l~~~~~ffEFip~~~~~ 337 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFI--GIPLDP------EDPGYVLAPDSGFFEFIPVDEDE 337 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEE--EEES-C------CC--EEE-TTSSEEEEEE-STT-
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEE--EEecCC------CCCceEeecCCeEEEEEeccCCc
Confidence 578997666555555566788888888755 447899999633 332211 1112222322 2455555433
Q ss_pred ------C-----ccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcC--CC--cEEEEccccceEE
Q 041055 399 ------R-----LALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDG--EG--FLYIVDRIKELIK 463 (526)
Q Consensus 399 ------~-----~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~--~G--~l~~~GR~~d~ik 463 (526)
. ..+..|+.-||+|++.+ |.|+ |+.||++++.. ++ .+.|+||.+.++.
T Consensus 338 ~~~~~~~~~l~~~ele~G~~YelviTt~~---GLyR--------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~ 400 (528)
T PF03321_consen 338 QNPSEQPKTLLLHELEVGEEYELVITTNS---GLYR--------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLS 400 (528)
T ss_dssp ------SSSEEGGG--TT-EEEEEEESTT---S-SS--------------EEECEEEEEEEEETTEEEEEEEEETTEEE-
T ss_pred ccccCCCceecHHHhcCCCeEEEEEeccc---ceee--------------eecCCEEEEeeccCCCcEEEEeccCCceee
Confidence 1 24667888899998742 3332 99999999853 34 6999999999999
Q ss_pred ecCeeeChHHHHHHHhcC-----CCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhc
Q 041055 464 HNGYQVAPAELEAVLLSH-----PNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQ 525 (526)
Q Consensus 464 ~~G~~v~~~eIE~~l~~~-----~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~ 525 (526)
+.|++++-.+|++++.+. -.+.+.++...........-+.++.+... ..+.+++.+.|-+.
T Consensus 401 l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~~~~~~~~~~lD~~ 466 (528)
T PF03321_consen 401 LFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-PDDLEELAKALDES 466 (528)
T ss_dssp SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--HHHHHHHHHHHHHC
T ss_pred cceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC-chHHHHHHHHHHHH
Confidence 999999999999998886 34677777765322333455666666644 22334555555443
No 134
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.47 E-value=2.9e-07 Score=67.53 Aligned_cols=48 Identities=35% Similarity=0.616 Sum_probs=44.7
Q ss_pred HHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhcC
Q 041055 473 ELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTSQL 526 (526)
Q Consensus 473 eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~~l 526 (526)
|||++|.+||+|.+|+|++++++..|+.++|||++ +.++|+++++++|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l 48 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKL 48 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhC
Confidence 79999999999999999999999999999999998 4589999999875
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.31 E-value=9.2e-05 Score=76.62 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=84.6
Q ss_pred CCC---ceEEEEecCCCCHHHHHHHHHhCCCC-ceeeccccccccceeecccCcccccCCCCccccc--CCCcEEEEEeC
Q 041055 323 LTS---LRRVGSGAAPLSKELADEFRAKFPWV-ELRQGYGLTESCGATTFMVSPKQARARSGSCGAL--SPTFYAKVVDT 396 (526)
Q Consensus 323 l~~---lr~v~~gG~~l~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~ivd~ 396 (526)
.++ +.+++.||.. .-...++..+|+. .+...|++||+.. ..+..+... +...+.. ..+.-.+.++.
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~--gi~~~~~~~---p~~~~~~l~~~~~ffEFiP~ 372 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYF--GINLNPMCK---PSEVSYTIMPNMAYFEFLPH 372 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEE--EeecCCCCC---CCCcceEecCCcEEEEeeec
Confidence 456 5556666644 5557777777665 4568999999643 222111100 1111211 22455566632
Q ss_pred CC-------------CccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCC----CcEEEEcccc
Q 041055 397 ET-------------RLALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGE----GFLYIVDRIK 459 (526)
Q Consensus 397 ~~-------------~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~----G~l~~~GR~~ 459 (526)
+. -..|..|+.=||+|++-+ |.| -|+.||++++..- -.+.|+||.+
T Consensus 373 ~~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~---GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR~~ 435 (597)
T PLN02249 373 NHDGDGALDETSLVELADVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFKFIRRKN 435 (597)
T ss_pred ccCCcccCCCCcEecHHHcCCCCeEEEEEEccc---cee--------------EeecCCEEEEeeccCCCcEEEEEccCC
Confidence 11 123557777899998621 222 1999999998532 3689999999
Q ss_pred ceEEecCeeeChHHHHHHHhc
Q 041055 460 ELIKHNGYQVAPAELEAVLLS 480 (526)
Q Consensus 460 d~ik~~G~~v~~~eIE~~l~~ 480 (526)
.++.+.|++++-.+++.++.+
T Consensus 436 ~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 436 VLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred cceecccccCCHHHHHHHHHH
Confidence 999999999999999998877
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=98.23 E-value=0.00025 Score=72.90 Aligned_cols=139 Identities=12% Similarity=0.090 Sum_probs=89.0
Q ss_pred CCCceEEEEecCCCCHHHHHHHHHhCCCCceee-ccccccccceeecccCcccccCCCCcccccCCCc-EEEEEeCCCC-
Q 041055 323 LTSLRRVGSGAAPLSKELADEFRAKFPWVELRQ-GYGLTESCGATTFMVSPKQARARSGSCGALSPTF-YAKVVDTETR- 399 (526)
Q Consensus 323 l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~- 399 (526)
.++++.|.+.-..-...-...++..++++++.. .|++||+...+-..+.... ....+...|+. ..+.++.+++
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~p----~~~sy~L~p~~~yFEFip~~~~~ 367 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSDP----SDVSYTLLPNMAYFEFLPVDKNN 367 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCCc----cCCceeecCCcEEEEEeecCCCc
Confidence 467787776555555666677877777877664 8999997433322111000 11223334433 3344532221
Q ss_pred ----------------------------ccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEc----
Q 041055 400 ----------------------------LALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFD---- 447 (526)
Q Consensus 400 ----------------------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~---- 447 (526)
..+..|+.=||+|+.-+ |.+ -||.||+.++.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---GLY--------------RYrlGDvv~V~GF~n 430 (606)
T PLN02247 368 GEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---GLY--------------RYRVGDILMVTGFYN 430 (606)
T ss_pred ccccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecC
Confidence 13567778899998621 111 29999998884
Q ss_pred CCCcEEEEccccceEEecCeeeChHHHHHHHhcCC
Q 041055 448 GEGFLYIVDRIKELIKHNGYQVAPAELEAVLLSHP 482 (526)
Q Consensus 448 ~~G~l~~~GR~~d~ik~~G~~v~~~eIE~~l~~~~ 482 (526)
..-.+.|++|.+.+..+.|++.+-.++-.++.+..
T Consensus 431 ~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a~ 465 (606)
T PLN02247 431 NAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAK 465 (606)
T ss_pred CCceEEEEecCCceeecccccCCHHHHHHHHHHHH
Confidence 33469999999999999999999999988877743
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=98.10 E-value=0.0013 Score=67.66 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=87.0
Q ss_pred CCCceEEEEecCCCCHHHHHHHHHhCCCCcee-eccccccccceeecccCcccccCCCCcccccCCCc-EEEEEeCCC--
Q 041055 323 LTSLRRVGSGAAPLSKELADEFRAKFPWVELR-QGYGLTESCGATTFMVSPKQARARSGSCGALSPTF-YAKVVDTET-- 398 (526)
Q Consensus 323 l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l~-~~yG~tE~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~-- 398 (526)
.++++.|.+....-...-...++..++++++. ..|++||+...+-..+.... ....+...|+. ..+.++.+.
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~p----~~~sy~L~p~~~yFEFip~~~~~ 378 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKP----SEVSYTLIPTMAYFEFLPVHRNN 378 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCCCCc----ccceeeecCCcEEEEEeeccCcc
Confidence 46778776655555566667777777777655 57999997433322111000 11222333433 234443111
Q ss_pred C----------------------ccCCCCCcceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEc----CCCcE
Q 041055 399 R----------------------LALPPYQRGELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFD----GEGFL 452 (526)
Q Consensus 399 ~----------------------~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~----~~G~l 452 (526)
+ ..+..|+.=||+|+.-+ |.+ -||.||+.++. ..-.+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---GLy--------------RYrlGDvv~V~Gf~n~~P~~ 441 (612)
T PLN02620 379 GVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---GLY--------------RYRVGDVLRVAGFKNKAPQF 441 (612)
T ss_pred cccccccccccccccccCccccHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCCCceE
Confidence 1 12567788899998621 212 29999998884 33469
Q ss_pred EEEccccceEEecCeeeChHHHHHHHhcC
Q 041055 453 YIVDRIKELIKHNGYQVAPAELEAVLLSH 481 (526)
Q Consensus 453 ~~~GR~~d~ik~~G~~v~~~eIE~~l~~~ 481 (526)
.|++|.+-+..+.|++.+-.++-.++.+.
T Consensus 442 ~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 442 SFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred EEEeecCceeecccccCCHHHHHHHHHHH
Confidence 99999999999999999999988876664
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=96.37 E-value=0.009 Score=46.21 Aligned_cols=46 Identities=20% Similarity=0.272 Sum_probs=35.2
Q ss_pred CeeeChHHHHHHHhcCCCcc-cEEEEeeeCCCCCceEEEEEEeCCCCC
Q 041055 466 GYQVAPAELEAVLLSHPNIL-DAAVIPLEDEEAGQIPMAYVVRAAGSQ 512 (526)
Q Consensus 466 G~~v~~~eIE~~l~~~~~v~-~~~vv~~~~~~~~~~~~a~vv~~~~~~ 512 (526)
|.+|+|.+||++|.++|++. +..++.... ...+.+...|...++..
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~-~~~D~l~v~vE~~~~~~ 47 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTRE-GGLDELTVRVELRPGFS 47 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEE-TTEEEEEEEEEESTTCC
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcC-CCCcEEEEEEEECCccC
Confidence 78999999999999999999 666664444 35577777888887653
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.31 E-value=0.39 Score=47.61 Aligned_cols=87 Identities=24% Similarity=0.247 Sum_probs=72.7
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC--chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL--LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
-+|+.|....+..+|+.|.. .|..+||+|..+..-+. .-+...+|+.++|++++|+.+ -..+.-..++++.++.+|
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~tvI 186 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPTVI 186 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCcEE
Confidence 48999999999999999998 89999999998876221 116788999999999999988 355667789999999999
Q ss_pred EEcchhHHHhh
Q 041055 156 ISASEELQKLT 166 (526)
Q Consensus 156 i~~~~~~~~~~ 166 (526)
.+.++.+-.+.
T Consensus 187 ~~tps~~l~la 197 (438)
T COG1541 187 AATPSYLLYLA 197 (438)
T ss_pred EEChHHHHHHH
Confidence 99988665543
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=86.55 E-value=7 Score=39.88 Aligned_cols=81 Identities=16% Similarity=0.215 Sum_probs=61.5
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCch--HHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLY--PSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
.+|..++...+...+..+.. .|+.++|++.++.+.+... ....+++...|+.++|... .+....++++.++..+
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~-~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVS-QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eecHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 47999999888888888876 8999999999988765432 3445788899998877653 2345678888999988
Q ss_pred EEcchhH
Q 041055 156 ISASEEL 162 (526)
Q Consensus 156 i~~~~~~ 162 (526)
+..+..+
T Consensus 181 ~~~ps~l 187 (445)
T TIGR03335 181 VASVFKL 187 (445)
T ss_pred EECHHHH
Confidence 7765543
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=86.19 E-value=6.4 Score=39.78 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=65.1
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC--chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL--LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
.+|..++......++..+.. .|+++||++......+. ......+++...|+.++++++.. .+.+...+++.++.++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 46788887777777777766 89999999887665443 22334577889999999887654 5788899999999999
Q ss_pred EEcchhHHHh
Q 041055 156 ISASEELQKL 165 (526)
Q Consensus 156 i~~~~~~~~~ 165 (526)
+..+..+..+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9988766554
No 142
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=75.71 E-value=18 Score=29.90 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=40.0
Q ss_pred EEEEeCCh-hHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeeccc
Q 041055 253 IFLCMIPM-FHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 253 ~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
+++...+- .|..|........-..|..++... ...++.+.+.+.+++++.+.++-
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 34444433 777887555555566788888875 46789999999999999887653
No 143
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=69.08 E-value=83 Score=27.88 Aligned_cols=91 Identities=16% Similarity=0.224 Sum_probs=55.3
Q ss_pred CcEEEEeCC-hhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHH------HHHHHhhccCCCC
Q 041055 251 NDIFLCMIP-MFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPV------ILGLVKYCKDSSY 322 (526)
Q Consensus 251 ~~~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~~ 322 (526)
+.+++.+.+ =.|..|........-..|-.++... ...++.+.+.+++++++.+.++-+. +..+.+...+...
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~ 164 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY 164 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC
Confidence 344444444 2788887555455555788888664 5678999999999999988765322 2223222222111
Q ss_pred CCCceEEEEecCCCCHHHHH
Q 041055 323 LTSLRRVGSGAAPLSKELAD 342 (526)
Q Consensus 323 l~~lr~v~~gG~~l~~~~~~ 342 (526)
.+.++ +++||.++.+++.+
T Consensus 165 ~~~v~-i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 165 RDSVK-FMVGGAPVTQDWAD 183 (197)
T ss_pred CCCCE-EEEEChhcCHHHHH
Confidence 12333 77899888865433
No 144
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=66.81 E-value=38 Score=35.00 Aligned_cols=84 Identities=12% Similarity=0.129 Sum_probs=63.7
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCch-HHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLY-PSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|++.+...+..... . .+++++|++...++-...+ ....++++..|+..+..+.. +.+.+...+++.++..++
T Consensus 186 ~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 186 VLSHRNLFLHSLAVCA---W-LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EeehHHHHHHHHHHHH---h-hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 5789988866665544 3 6889999999887754332 33445588899988877664 889999999999999999
Q ss_pred EcchhHHHhh
Q 041055 157 SASEELQKLT 166 (526)
Q Consensus 157 ~~~~~~~~~~ 166 (526)
+.+..+..+.
T Consensus 261 ~~p~~~~~l~ 270 (521)
T PRK06187 261 AVPTIWQMLL 270 (521)
T ss_pred chHHHHHHHH
Confidence 9887766554
No 145
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=60.07 E-value=43 Score=34.58 Aligned_cols=84 Identities=19% Similarity=0.205 Sum_probs=63.2
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC--chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL--LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
.+|+..+...+..+. ..+++++++++...++-.. .+...+++++..|+.+++. +....+.+...+++.++.++
T Consensus 185 ~~s~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 185 MLTHRQLLSNAADWA----EYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEecHHHHHHHHHHH----HhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 578888876554433 2367899999988877543 3345678999999988775 56788999999999999999
Q ss_pred EEcchhHHHhh
Q 041055 156 ISASEELQKLT 166 (526)
Q Consensus 156 i~~~~~~~~~~ 166 (526)
...+..+..+.
T Consensus 260 ~~~p~~~~~l~ 270 (513)
T PRK07656 260 PGPPTMYNSLL 270 (513)
T ss_pred echHHHHHHHH
Confidence 88877666553
No 146
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=58.08 E-value=59 Score=32.46 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc-ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD-VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.|+.+|++. -....+|+..+...+..+...+. .+.++++++....+... .+...+++++..|+..+..+
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~--~~~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSI--EFVVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSH--HHHHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccc--eeeeeecccccccccccccc
Confidence 567788776 12235678888777666554442 24678888877777643 23356778888899888875
Q ss_pred -CCCHHHHHHHHHhcCccEeec
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPL 305 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~ 305 (526)
....+.+...+++.+++.++.
T Consensus 78 ~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHHHHHHTESEEEE
T ss_pred cccccccccccccccceeEEEE
Confidence 678899999999999999996
No 147
>PRK08315 AMP-binding domain protein; Validated
Probab=56.05 E-value=65 Score=33.77 Aligned_cols=84 Identities=11% Similarity=0.044 Sum_probs=61.6
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCC--CCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPN--SLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
-.+|...+...+..+. ...+++++|++...++- ...++..+++++..|+..+.......+..+...+++.++.+
T Consensus 217 v~~s~~~l~~~~~~~~----~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~ 292 (559)
T PRK08315 217 ATLTHRNILNNGYFIG----EAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTA 292 (559)
T ss_pred EEeeHHHHHHHHHHHH----HhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeE
Confidence 3578888765555433 33688999999887765 34455667888899988875555677888999999999999
Q ss_pred EEEcchhHHH
Q 041055 155 IISASEELQK 164 (526)
Q Consensus 155 ii~~~~~~~~ 164 (526)
++..+..+..
T Consensus 293 ~~~~P~~~~~ 302 (559)
T PRK08315 293 LYGVPTMFIA 302 (559)
T ss_pred EecchHHHHH
Confidence 9887765443
No 148
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=55.96 E-value=1e+02 Score=31.32 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=72.5
Q ss_pred HHHhhhHHHHHHHHHHhhh-hcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccE
Q 041055 225 GVILTHANFISIMQLLRWT-VDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNN 302 (526)
Q Consensus 225 ~v~~sh~~l~~~~~~~~~~-~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 302 (526)
++..|.+.+...+..++.. +.+++.++|++..+.|.+.-+- .+.+++-..|..++... .+....+.=.|++.++..
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~--l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~ 152 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWV--LCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKA 152 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHH--HHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEE
Confidence 4567888888777665533 3557899999999988654333 44556666777777664 456677777889999999
Q ss_pred eecccHHH-----HHHHhh----------ccCCCCCCCceEEEEec
Q 041055 303 IPLVPPVI-----LGLVKY----------CKDSSYLTSLRRVGSGA 333 (526)
Q Consensus 303 ~~~~P~~~-----~~l~~~----------~~~~~~l~~lr~v~~gG 333 (526)
++..|.+. +.|.+. ..+...++.++.++..+
T Consensus 153 l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 153 LFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred EEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecC
Confidence 98877542 223222 11245678889888776
No 149
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=55.30 E-value=1.1e+02 Score=27.58 Aligned_cols=90 Identities=16% Similarity=0.166 Sum_probs=58.0
Q ss_pred CcEEEEeCC-hhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHH---HHHH---HhhccCCCC
Q 041055 251 NDIFLCMIP-MFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPV---ILGL---VKYCKDSSY 322 (526)
Q Consensus 251 ~~~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~---~~~l---~~~~~~~~~ 322 (526)
+.+++.+.+ =.|..|........-..|..++... ...++.+.+.+++++++.+.++-.+ ...+ ++...+. .
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~-~ 167 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR-G 167 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc-C
Confidence 445555554 3777777555555556788888875 5789999999999999988765322 2222 2221111 2
Q ss_pred CCCceEEEEecCCCCHHHHHH
Q 041055 323 LTSLRRVGSGAAPLSKELADE 343 (526)
Q Consensus 323 l~~lr~v~~gG~~l~~~~~~~ 343 (526)
+ .++ +++||.+++++..+.
T Consensus 168 ~-~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 168 I-KIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred C-CCe-EEEEChhcCHHHHhh
Confidence 2 343 677889999887665
No 150
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=54.53 E-value=32 Score=31.33 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=42.9
Q ss_pred cCCCCCCEEEEECCCCC--chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCC
Q 041055 99 LGVRKGDVVFVLAPNSL--LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGA 152 (526)
Q Consensus 99 ~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 152 (526)
+|+.++|++. .+|-.- -....+++++..|+..+.+ +.+.++++...+++.++
T Consensus 173 ~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 173 AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 7899999999 887654 3345689999999998888 68999999999988765
No 151
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=53.89 E-value=1.3e+02 Score=28.30 Aligned_cols=96 Identities=11% Similarity=0.049 Sum_probs=61.1
Q ss_pred CCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCC----CHHHHHHHHHhc
Q 041055 75 THERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSIN----TESEIVKQVRDS 150 (526)
Q Consensus 75 ~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~ 150 (526)
.+..+-.+.+. |+..+|+.|++ . |..|.+++.+....... .+...|..+..++-.. ..+++..++++.
T Consensus 8 a~~~iG~GHv~-Rcl~LA~~l~~-~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~ 79 (279)
T TIGR03590 8 ASSEIGLGHVM-RCLTLARALHA-Q----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEE 79 (279)
T ss_pred CCccccccHHH-HHHHHHHHHHH-C----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhc
Confidence 35566666664 57779999965 3 55677777766555443 2357777666664322 245788899999
Q ss_pred CCeEEEEcchh-----HHHhhcCCCCEEEEcCC
Q 041055 151 GAKLIISASEE-----LQKLTKVNVPIIVTSRD 178 (526)
Q Consensus 151 ~~~~ii~~~~~-----~~~~~~~~~~~i~~~~~ 178 (526)
+++++++|.-. ...++....+++++++.
T Consensus 80 ~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 80 KFDILIVDHYGLDADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecC
Confidence 99999998632 23333445566666643
No 152
>PRK07529 AMP-binding domain protein; Validated
Probab=53.00 E-value=74 Score=34.14 Aligned_cols=98 Identities=10% Similarity=0.091 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCC-CCCCCchHHHhhhHHHHHHHHHHhhhhc-ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 206 TQDDTAAILYSS-GTTGTSKGVILTHANFISIMQLLRWTVD-VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 206 ~~~~~a~i~~TS-GTTG~PK~v~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
.++.+|++.+.. +..+ +...+|.+.+...+..+...+. .+..+++++...+|...-+ ...+++++..|..+.+.
T Consensus 38 ~p~~~Al~~~~~~~~~~--~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~ 113 (632)
T PRK07529 38 HPDAPALSFLLDADPLD--RPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPIN 113 (632)
T ss_pred CCCCceEEeecccCCCC--CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCC
Confidence 456677765533 2222 2356788888877766655442 3577899999988864432 24566777778544344
Q ss_pred cCCCHHHHHHHHHhcCccEeeccc
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
+...++.+...+++.++..++...
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEeC
Confidence 567899999999999999988753
No 153
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=52.17 E-value=1.8e+02 Score=30.37 Aligned_cols=85 Identities=16% Similarity=0.126 Sum_probs=61.0
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--CchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNS--LLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
-.+|++.+...+.... .. .++.++|++..++|-. .-+...++..+..|+..+.......++.+...+++.++.+
T Consensus 201 V~~th~~l~~~~~~~~---~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~ 276 (539)
T PRK06334 201 VPLTHANLLANQRACL---KF-FSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTF 276 (539)
T ss_pred EEEcHHHHHHHHHHHH---Hh-cCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcE
Confidence 3689988876544332 23 6788899988887643 2233345677888888776555577889999999999999
Q ss_pred EEEcchhHHHh
Q 041055 155 IISASEELQKL 165 (526)
Q Consensus 155 ii~~~~~~~~~ 165 (526)
+...+..+..+
T Consensus 277 ~~~~P~~~~~l 287 (539)
T PRK06334 277 LGSTPVFFDYI 287 (539)
T ss_pred EEecHHHHHHH
Confidence 99888766554
No 154
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=51.42 E-value=1.8e+02 Score=25.86 Aligned_cols=89 Identities=19% Similarity=0.321 Sum_probs=53.5
Q ss_pred CcEEEEeCC-hhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeeccc---HHHHHH---HhhccCCCC
Q 041055 251 NDIFLCMIP-MFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVP---PVILGL---VKYCKDSSY 322 (526)
Q Consensus 251 ~~~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P---~~~~~l---~~~~~~~~~ 322 (526)
+.+++.+.+ =.|..|........-..|..++... ..+++.+.+.+++++++.+.++- ..+..+ .+...+...
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL 162 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC
Confidence 344555554 3777777444444445788887654 56889999999999999886653 222222 222222211
Q ss_pred CCCceEEEEecCCCCHHH
Q 041055 323 LTSLRRVGSGAAPLSKEL 340 (526)
Q Consensus 323 l~~lr~v~~gG~~l~~~~ 340 (526)
...+ .+++||.+++++.
T Consensus 163 ~~~~-~i~vGG~~~~~~~ 179 (201)
T cd02070 163 RDKV-KVMVGGAPVNQEF 179 (201)
T ss_pred CcCC-eEEEECCcCCHHH
Confidence 1233 3677888888753
No 155
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=51.37 E-value=2.5e+02 Score=30.97 Aligned_cols=119 Identities=14% Similarity=0.167 Sum_probs=76.7
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc----ccCCCC-----------cEEEEeCChhHHHHHHHHH
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD----VTHAQN-----------DIFLCMIPMFHIYGLAFFA 270 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~----~~~~~~-----------~~~l~~~p~~~~~g~~~~~ 270 (526)
.++.+|++....|. + -..+|.+.+...+..+...+. .+..++ |++...++-..- +....
T Consensus 74 ~p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e--w~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN--WLVAD 147 (746)
T ss_pred cCCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH--HHHHH
Confidence 35667765432221 1 124688887777666554443 246666 777777764322 22455
Q ss_pred HhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEec
Q 041055 271 TGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGA 333 (526)
Q Consensus 271 ~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG 333 (526)
++++..|+..+.+ +.+.++.+...+++-++.++++.+..+..+.+.. ..++.++.+++-+
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~---~~~~~l~~ii~~~ 208 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK---NELPHLKKLIILD 208 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh---ccCCCceEEEEEC
Confidence 6777788877766 5789999999999999999998777776665432 2355677666543
No 156
>PRK09274 peptide synthase; Provisional
Probab=51.07 E-value=1.2e+02 Score=31.63 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCCCC-CCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 206 TQDDTAAILYSSGTT-GTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTT-G~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
.++.++++....++. ...+...+|...+...+..+...+ ..+..+++++...++...- +...+++++..|+..+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~--~~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE--FFALTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH--HHHHHHHHHHcCeEEEEc
Confidence 345566554332221 222333578888887776655544 2347789999888875433 335677888899988877
Q ss_pred c-CCCHHHHHHHHHhcCccEeeccc
Q 041055 284 Q-RFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 284 ~-~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
+ ....+.+...+++.++..++..+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 5 56788888999999998888754
No 157
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=48.98 E-value=45 Score=28.91 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=30.5
Q ss_pred hHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHh
Q 041055 471 PAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTS 524 (526)
Q Consensus 471 ~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~ 524 (526)
...|+..+.+.|+|.+|.|+...+ +..||+-+ ... ....+++++.+++
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~----~a~Vav~~-~~~-~~~~~~i~~~V~~ 124 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDD----NAYVAVDL-DFN-RFNTKKIKKKVEK 124 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECC----EEEEEEEe-ccc-ccchhHHHHHHHH
Confidence 356888999999999999998655 34455544 321 2333445554444
No 158
>PRK12583 acyl-CoA synthetase; Provisional
Probab=48.67 E-value=1.1e+02 Score=31.89 Aligned_cols=83 Identities=14% Similarity=0.138 Sum_probs=60.8
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCC--CCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPN--SLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
.+|+..+...+..+.. ..+++++|++....+- ....+..+++++..|+.++..........+...+++.++..+
T Consensus 220 ~~s~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 220 TLSHHNILNNGYFVAE----SLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EeeHHHHHHHHHHHHH----HhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 6788888655554332 3678899999877654 345566778888899888754555678888899999999999
Q ss_pred EEcchhHHH
Q 041055 156 ISASEELQK 164 (526)
Q Consensus 156 i~~~~~~~~ 164 (526)
+..+..+..
T Consensus 296 ~~~P~~~~~ 304 (558)
T PRK12583 296 YGVPTMFIA 304 (558)
T ss_pred eccHHHHHH
Confidence 887765433
No 159
>PLN03052 acetate--CoA ligase; Provisional
Probab=48.56 E-value=1.3e+02 Score=33.13 Aligned_cols=100 Identities=15% Similarity=0.159 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM- 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 283 (526)
.++.+|++.-..+..+.+ ...+|...+...+..+...+ ..+..++|++...+|..-- ....+++++..|+..+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e--~via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH--AVIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH--HHHHHHHHHHcCCEEEeeC
Confidence 356677654332221211 13478888887776665544 2357899999999986432 225567788888888776
Q ss_pred cCCCHHHHHHHHHhcCccEeecccH
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVPP 308 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P~ 308 (526)
+.+..+.+...++..++..++....
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCc
Confidence 5789999999999999999887654
No 160
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=48.08 E-value=1.4e+02 Score=29.47 Aligned_cols=86 Identities=17% Similarity=0.111 Sum_probs=64.9
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCC--HHHHHHHHHhcCCe
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINT--ESEIVKQVRDSGAK 153 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~ 153 (526)
..+|...+...+..+.. . .+++++|++....+-... .+..+++.+..|+..+..+.... .+.+..++++.++.
T Consensus 138 v~~s~~~~~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t 213 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLAR---R-YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVT 213 (408)
T ss_pred EEeccHHHHHHHHHHHH---h-cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCce
Confidence 35788888766665554 2 677889999888776644 45567888888988777765554 78899999999999
Q ss_pred EEEEcchhHHHhh
Q 041055 154 LIISASEELQKLT 166 (526)
Q Consensus 154 ~ii~~~~~~~~~~ 166 (526)
.+++.+..+..+.
T Consensus 214 ~l~~~p~~~~~l~ 226 (408)
T TIGR01733 214 VLNLTPSLLALLA 226 (408)
T ss_pred EEEeCHHHHHHHH
Confidence 9999888776654
No 161
>PRK06188 acyl-CoA synthetase; Validated
Probab=47.08 E-value=1.3e+02 Score=31.30 Aligned_cols=83 Identities=8% Similarity=0.014 Sum_probs=62.6
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIIS 157 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 157 (526)
.+|+..+...+.... ..++++.++++...++-...+...+++.+..|+..+..+. ..++.+...+++.++.++..
T Consensus 187 ~~s~~~l~~~~~~~~----~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 187 MGTHRSIATMAQIQL----AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeehHHHHHHHHHHH----hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEe
Confidence 578887766554322 3367889999998888776565667788888988777754 66888999999999999988
Q ss_pred cchhHHHh
Q 041055 158 ASEELQKL 165 (526)
Q Consensus 158 ~~~~~~~~ 165 (526)
.+..+..+
T Consensus 262 ~P~~l~~l 269 (524)
T PRK06188 262 VPTMIYAL 269 (524)
T ss_pred hHHHHHHH
Confidence 87766554
No 162
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=46.17 E-value=54 Score=27.84 Aligned_cols=48 Identities=15% Similarity=0.124 Sum_probs=29.4
Q ss_pred HHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC-CCHHHHHHHHHh
Q 041055 472 AELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ-LTEDQVMQFVTS 524 (526)
Q Consensus 472 ~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~-~~~~~l~~~l~~ 524 (526)
..|...+.+.|+|.+|.++...+ ...+++ .+..+.+ ...+++++.+.+
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg~----~A~Vgv-~~~~~~~~~~~~~iK~~Va~ 105 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITGN----YAYVGV-DLTNGLEGSVTDELKEKVAE 105 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEECC----EEEEEE-EcCCCcchhhHHHHHHHHHH
Confidence 45788889999999999997654 344444 3333322 223555555544
No 163
>PRK07788 acyl-CoA synthetase; Validated
Probab=44.32 E-value=1.4e+02 Score=31.17 Aligned_cols=85 Identities=14% Similarity=0.044 Sum_probs=62.9
Q ss_pred HhhhHHHHHHHHHHhhhhc-ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTVD-VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|.+.+...+..+...+. .+..+++++...++-.- .+...+++++..|+..+..+ ....+.+...+++.+++.++
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 151 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR--GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALV 151 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEE
Confidence 4788888776666554442 34678999888876533 33356788889999998885 57888999999999999998
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
..+.....+
T Consensus 152 ~~~~~~~~~ 160 (549)
T PRK07788 152 YDDEFTDLL 160 (549)
T ss_pred ECchhHHHH
Confidence 877665544
No 164
>PRK06839 acyl-CoA synthetase; Validated
Probab=43.41 E-value=2.1e+02 Score=29.27 Aligned_cols=97 Identities=8% Similarity=-0.045 Sum_probs=69.2
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc--ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD--VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~--~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
.|+.++++. + ...+|+..+...+..+...+. .+..+++++...++-... +...+++++..|+..+..
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~ 83 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPL 83 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEec
Confidence 356666653 1 346788888877777665542 346788888887776533 335677888899988877
Q ss_pred c-CCCHHHHHHHHHhcCccEeecccHHHHHH
Q 041055 284 Q-RFDLQAMIEAIKTYQVNNIPLVPPVILGL 313 (526)
Q Consensus 284 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 313 (526)
+ ..+.+.+...+++.+++.++..+.....+
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 84 NIRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred CcccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 5 46888899999999999998877665443
No 165
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=43.12 E-value=67 Score=26.54 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=31.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCC---CCchHHHHHHHHHcCCE
Q 041055 89 RSLASGLYHALGVRKGDVVFVLAPN---SLLYPSICLAIFSLGAI 130 (526)
Q Consensus 89 ~~lA~~L~~~~gl~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~ 130 (526)
+.++..|.+ +|+.+++.|.+++.. +.....+++.+..+|.-
T Consensus 81 ~~~~~~~~~-~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEA-KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHH-cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 457777877 999999999999975 55666677777778853
No 166
>PLN03051 acyl-activating enzyme; Provisional
Probab=43.07 E-value=1.5e+02 Score=30.55 Aligned_cols=84 Identities=19% Similarity=0.145 Sum_probs=59.2
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|...+...+... ... +++.++|++...++-... ....+++++..|+..+........+.+...+++.++.++.
T Consensus 138 ~~sh~~~~~~~~~~---~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 138 PWTHLSPLRCASDG---WAH-MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEccchHHHHHHHH---HHh-cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 57877765543322 223 678899988776664422 2345778889999888776545678899999999999999
Q ss_pred EcchhHHHh
Q 041055 157 SASEELQKL 165 (526)
Q Consensus 157 ~~~~~~~~~ 165 (526)
..+..+..+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 887766554
No 167
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=42.98 E-value=1.1e+02 Score=30.34 Aligned_cols=65 Identities=23% Similarity=0.226 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCC-----CCHHHHHHHHHhcCCeEEEE
Q 041055 88 IRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSI-----NTESEIVKQVRDSGAKLIIS 157 (526)
Q Consensus 88 ~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 157 (526)
+..+.-.|+. +++++||-|.+ .+.-|+...=+++..|+.+|.++-+ .+++.++..+... .|.|+.
T Consensus 59 T~AL~laL~a-l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLA-LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHh-cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 4556666766 89999996554 4677899999999999999988643 5788888888775 566554
No 168
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=42.97 E-value=1.4e+02 Score=32.08 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM- 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 283 (526)
.++.+|++..... .+ ....+|.+.+...+..+...+ ..+..++|++...++...- ....+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~~-~~--~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGDD-PG--DSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPE--AAVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecC
Confidence 4677777643211 01 234578888887776665544 2347789999888875433 225567888889888876
Q ss_pred cCCCHHHHHHHHHhcCccEeecccH
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVPP 308 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P~ 308 (526)
+.+..+.+...++..++..++....
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcCc
Confidence 4678899999999999999987543
No 169
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=42.51 E-value=93 Score=31.24 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=59.7
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|++.+...+...+. .++++++|++...++-..- .+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 130 ~~s~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 130 PHTFRNHYASAVGSKE----NLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEehHHHHHHHHHHHh----hcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 6899988776665543 2678999999887765322 233567888999988877543 4888899999999998
Q ss_pred EcchhHHHh
Q 041055 157 SASEELQKL 165 (526)
Q Consensus 157 ~~~~~~~~~ 165 (526)
..+..+..+
T Consensus 203 ~~P~~l~~l 211 (436)
T TIGR01923 203 LVPTQLNRL 211 (436)
T ss_pred eHHHHHHHH
Confidence 887766554
No 170
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=41.77 E-value=1.6e+02 Score=30.39 Aligned_cols=85 Identities=16% Similarity=0.147 Sum_probs=64.0
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
..+|...+...+...... ++++++|++...++-... .+..+++++..|+..+.. +....+.+...+++.++.++
T Consensus 179 v~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY----LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGL 253 (515)
T ss_pred EEEecHHHHHHHHHHHHH----hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceE
Confidence 457888887666654432 567899999988876543 245678889999988866 45678899999999999999
Q ss_pred EEcchhHHHhh
Q 041055 156 ISASEELQKLT 166 (526)
Q Consensus 156 i~~~~~~~~~~ 166 (526)
...+..+..+.
T Consensus 254 ~~~P~~~~~l~ 264 (515)
T TIGR03098 254 AAVPPLWAQLA 264 (515)
T ss_pred ecChHHHHHHH
Confidence 98887665543
No 171
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=41.71 E-value=1.7e+02 Score=31.25 Aligned_cols=98 Identities=14% Similarity=0.089 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM- 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 283 (526)
.++.+|++.... .+|. ...+|.+.+...+..+...+ ..+..++|++...+|...- ....+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPE--AAIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCCEEeccC
Confidence 456777664322 1222 23478888877766655444 2357889999998886433 235677888889888766
Q ss_pred cCCCHHHHHHHHHhcCccEeecccH
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVPP 308 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P~ 308 (526)
+.+.++.+...++..++..++....
T Consensus 145 ~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 5688999999999999999887654
No 172
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=41.28 E-value=97 Score=27.29 Aligned_cols=55 Identities=31% Similarity=0.468 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 84 LHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 84 l~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
..+|.+.+++++.++++++++|+..++... |.-++|+ ++....++-++++|...+
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEeh
Confidence 356788888898888999999977776654 4445555 456777788888887654
No 173
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=41.02 E-value=1.7e+02 Score=30.59 Aligned_cols=97 Identities=12% Similarity=0.164 Sum_probs=66.8
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.++.+|++..-.+ .++...+|...+...+..+...+ ..+..+++++...++...-+ ...+++++..|+..+...
T Consensus 37 ~p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 37 CPDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPLM 111 (547)
T ss_pred CCCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEeccc
Confidence 3566776653322 22334678888887766655544 23467899998888754433 356778889999888764
Q ss_pred -CCCHHHHHHHHHhcCccEeeccc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
....+.+...++..+++.++...
T Consensus 112 ~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 112 PIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred cccCHHHHHHHHHhcCceEEEEec
Confidence 56788899999999998887654
No 174
>PRK08316 acyl-CoA synthetase; Validated
Probab=40.81 E-value=2.6e+02 Score=28.79 Aligned_cols=87 Identities=9% Similarity=-0.007 Sum_probs=62.1
Q ss_pred HHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEe
Q 041055 226 VILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 226 v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 303 (526)
..+|...+...+..+...+ ..+..+++++....+...- +...+++++..|+..+... .++.+.+...+++.++..+
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~i 112 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA--YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAF 112 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEE
Confidence 4567777776665554433 2246788888888775443 3356778888998888775 5688899999999999999
Q ss_pred ecccHHHHHHH
Q 041055 304 PLVPPVILGLV 314 (526)
Q Consensus 304 ~~~P~~~~~l~ 314 (526)
+........+.
T Consensus 113 i~~~~~~~~~~ 123 (523)
T PRK08316 113 LVDPALAPTAE 123 (523)
T ss_pred EEccchHHHHH
Confidence 88876655543
No 175
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.81 E-value=1.8e+02 Score=30.55 Aligned_cols=83 Identities=10% Similarity=0.098 Sum_probs=62.1
Q ss_pred HhhhHHHHHHHHHHhhhhc--ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEe
Q 041055 227 ILTHANFISIMQLLRWTVD--VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~--~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 303 (526)
.+|+..+...+..+...+. .+..+++++...++...- +...+++++..|+..+... .+..+.+...+++.++..+
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~--~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQ--YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 5788888887777766553 257789999888876433 2255778888999888774 5688899999999999998
Q ss_pred ecccHHHH
Q 041055 304 PLVPPVIL 311 (526)
Q Consensus 304 ~~~P~~~~ 311 (526)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87655443
No 176
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=40.72 E-value=2.3e+02 Score=25.61 Aligned_cols=86 Identities=16% Similarity=0.222 Sum_probs=51.2
Q ss_pred ChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHHHHHHHhh-----ccCCCCCCCceEEEEe
Q 041055 259 PMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPVILGLVKY-----CKDSSYLTSLRRVGSG 332 (526)
Q Consensus 259 p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-----~~~~~~l~~lr~v~~g 332 (526)
.=.|..|-.......-..|-.++-.. ...++.+.+..+++|++.+.++-.+-..+... ..+...++.--.+.+|
T Consensus 114 GDvHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vG 193 (227)
T COG5012 114 GDVHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVG 193 (227)
T ss_pred ccHHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeec
Confidence 44677776333222333466666553 56789999999999999987764432222211 1122333333456779
Q ss_pred cCCCCHHHHHHH
Q 041055 333 AAPLSKELADEF 344 (526)
Q Consensus 333 G~~l~~~~~~~~ 344 (526)
|+|++.++.+++
T Consensus 194 GApvtq~~a~~i 205 (227)
T COG5012 194 GAPVTQDWADKI 205 (227)
T ss_pred CccccHHHHHHh
Confidence 999997765544
No 177
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=40.63 E-value=2.3e+02 Score=30.45 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-c
Q 041055 207 QDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-Q 284 (526)
Q Consensus 207 ~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~ 284 (526)
++.+|++.... .|. ...+|.+.+...+..+...+ ..+..++|++...+|...- ....+++++..|+..+.. +
T Consensus 98 ~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 98 DDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPE--TVVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCcEEEeeCC
Confidence 46677654322 121 23478888887766655444 2347889999998886432 235677888889887776 4
Q ss_pred CCCHHHHHHHHHhcCccEeecccH
Q 041055 285 RFDLQAMIEAIKTYQVNNIPLVPP 308 (526)
Q Consensus 285 ~~~~~~~~~~i~~~~~t~~~~~P~ 308 (526)
.+..+.+...++..++..++....
T Consensus 172 ~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 DFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCHHHHHHHHHHcCCcEEEEccc
Confidence 678899999999999998887653
No 178
>PRK05850 acyl-CoA synthetase; Validated
Probab=40.52 E-value=2.1e+02 Score=30.19 Aligned_cols=104 Identities=12% Similarity=0.076 Sum_probs=68.5
Q ss_pred CCCCEEEEEcC-CC-CCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 206 TQDDTAAILYS-SG-TTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 206 ~~~~~a~i~~T-SG-TTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
.++.++++... ++ ..|. ...+|+..+...+..+...+.-...++|++...++... .+...+++++..|+.++..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGL--EYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEec
Confidence 45667665432 11 1222 23578888877666655444321146888888887543 3335678888999999888
Q ss_pred cC----CCHHHHHHHHHhcCccEeecccHHHHHH
Q 041055 284 QR----FDLQAMIEAIKTYQVNNIPLVPPVILGL 313 (526)
Q Consensus 284 ~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l 313 (526)
+. ...+.+...++..++..++..+.....+
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 53 3567899999999999999887665554
No 179
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=40.11 E-value=3.1e+02 Score=28.79 Aligned_cols=84 Identities=15% Similarity=0.121 Sum_probs=60.4
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC-chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL-LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|...+...+.... .. +++.++|++..+.|-.- .-+...++.+..|+..+.. +.+....+...+++.++.++.
T Consensus 191 ~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 265 (563)
T PLN02860 191 TISHSALIVQSLAKI---AI-VGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMI 265 (563)
T ss_pred EeehHHHHHHHHHHH---hh-cCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEE
Confidence 578887765544432 23 67899999888777432 2234567788888877665 467888999999999999999
Q ss_pred EcchhHHHhh
Q 041055 157 SASEELQKLT 166 (526)
Q Consensus 157 ~~~~~~~~~~ 166 (526)
..+..+..+.
T Consensus 266 ~~P~~~~~l~ 275 (563)
T PLN02860 266 TVPAMMADLI 275 (563)
T ss_pred eChHHHHHHH
Confidence 8887666543
No 180
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=40.06 E-value=64 Score=31.77 Aligned_cols=65 Identities=25% Similarity=0.258 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCC-----CCHHHHHHHHHhcCCeEEEE
Q 041055 88 IRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSI-----NTESEIVKQVRDSGAKLIIS 157 (526)
Q Consensus 88 ~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 157 (526)
...+--.|.. +|+++||.|.+- ..-+....-|+..+|+.++.++.. ..++.+...++.-. ++|+.
T Consensus 50 t~Al~~al~~-l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 50 TSALHLALRA-LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHHHH-TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred hHHHHHHHHh-cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 3445556766 899999999885 456777888999999999887644 46888888876544 55544
No 181
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=40.06 E-value=1.4e+02 Score=31.36 Aligned_cols=84 Identities=10% Similarity=0.126 Sum_probs=61.5
Q ss_pred HhhhHHHHHHHHHHhhhh--cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEe
Q 041055 227 ILTHANFISIMQLLRWTV--DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~--~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 303 (526)
.+|+..+...+..+...+ ..+..+++++...++... .+...+++++..|+..+.. +.+..+.+...+++.+++.+
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~v 127 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCL--QYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVL 127 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEE
Confidence 468888877766666544 235778898888877543 2335677888899998866 45788999999999999998
Q ss_pred ecccHHHHH
Q 041055 304 PLVPPVILG 312 (526)
Q Consensus 304 ~~~P~~~~~ 312 (526)
+........
T Consensus 128 i~~~~~~~~ 136 (560)
T PRK08751 128 VVIDNFGTT 136 (560)
T ss_pred EEcchhHHH
Confidence 887655443
No 182
>PLN02565 cysteine synthase
Probab=39.80 E-value=1.9e+02 Score=28.03 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=49.4
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
.| +.+|....+....+-.-+...++|..+|..++.+-|...+......++..+++++++++
T Consensus 60 ~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 60 KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred cCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 45 47786655666677777778888999999888877877888889999999999999875
No 183
>PLN02574 4-coumarate--CoA ligase-like
Probab=39.42 E-value=2.5e+02 Score=29.47 Aligned_cols=99 Identities=17% Similarity=0.173 Sum_probs=67.1
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc--ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD--VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~--~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~ 283 (526)
.++.++++... +|. .+|...+...+..+...+. .+..++|++....+-.. .+...+++++..|+..+..
T Consensus 52 ~~~~~a~~~~~---~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALIDSS---TGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEECC---CCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCc
Confidence 34566666422 221 3677777766666555442 34778999988887543 2335567888899988877
Q ss_pred c-CCCHHHHHHHHHhcCccEeecccHHHHHH
Q 041055 284 Q-RFDLQAMIEAIKTYQVNNIPLVPPVILGL 313 (526)
Q Consensus 284 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 313 (526)
+ ....+.+...++..++..++..+.....+
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 5 56788899999999998888776654443
No 184
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=39.41 E-value=3.4e+02 Score=27.98 Aligned_cols=100 Identities=14% Similarity=0.023 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM- 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 283 (526)
.++.+|++.-.. .+.. -.+|...+...+..+...+ ..+..+++++....+...-+- ..+++++..|+..+..
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcC
Confidence 456677654321 1111 2367777766666555433 234678898888877644332 4567888889888876
Q ss_pred cCCCHHHHHHHHHhcCccEeecccHHHH
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVPPVIL 311 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 311 (526)
+.+..+.+...++..+++.++..+....
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchhH
Confidence 4578899999999999999988776543
No 185
>PLN02736 long-chain acyl-CoA synthetase
Probab=39.40 E-value=3e+02 Score=29.63 Aligned_cols=101 Identities=10% Similarity=-0.031 Sum_probs=70.5
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|.+.+...+..+...+ ..+..++|++...++...-+- ...++++..|+.++.. +.++++.+...+++.+++.++
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 368888877766655443 335788999988877544322 4566778888888866 567899999999999999999
Q ss_pred cccHHHHHHHhhccCCCCCCCceEEEEe
Q 041055 305 LVPPVILGLVKYCKDSSYLTSLRRVGSG 332 (526)
Q Consensus 305 ~~P~~~~~l~~~~~~~~~l~~lr~v~~g 332 (526)
..+..+..+..... .++.++.++..
T Consensus 156 ~~~~~~~~~~~~~~---~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS---EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh---cCCCceEEEEE
Confidence 98877665544311 23456665544
No 186
>PLN03102 acyl-activating enzyme; Provisional
Probab=39.32 E-value=1.6e+02 Score=31.20 Aligned_cols=83 Identities=10% Similarity=0.081 Sum_probs=61.3
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|.+.+...+..+...+ ..++.++|++...+|..- .+...+++++..|+.++... ..+.+.+...++..+++.++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii 116 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILF 116 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEE
Confidence 478888877766655444 234778999988888533 33356778888998888774 57899999999999999998
Q ss_pred cccHHHH
Q 041055 305 LVPPVIL 311 (526)
Q Consensus 305 ~~P~~~~ 311 (526)
..+....
T Consensus 117 ~~~~~~~ 123 (579)
T PLN03102 117 VDRSFEP 123 (579)
T ss_pred EChhhHH
Confidence 8765443
No 187
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=39.07 E-value=1.6e+02 Score=31.01 Aligned_cols=85 Identities=13% Similarity=0.072 Sum_probs=61.3
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc--hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL--YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLI 155 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 155 (526)
.+|...+...+... ... ++++++|++....+-... ....+++.+..|+..+.......++.+...+++.++.++
T Consensus 224 ~~s~~~l~~~~~~~---~~~-~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 224 LHVHNAMLQHYQTG---KYV-LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEecHHHHHHHHHH---HHh-cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 57888776544332 223 678889987665544322 244577888999988777767889999999999999999
Q ss_pred EEcchhHHHhh
Q 041055 156 ISASEELQKLT 166 (526)
Q Consensus 156 i~~~~~~~~~~ 166 (526)
...+..+..+.
T Consensus 300 ~~~P~~~~~l~ 310 (570)
T PRK04319 300 YTAPTAIRMLM 310 (570)
T ss_pred EeCHHHHHHHH
Confidence 98887766553
No 188
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=38.95 E-value=4.2e+02 Score=27.66 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=68.4
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcc-cCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDV-THAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.++.++++...-+. .+|++.+...+..+...+.- +..++|++...++...- +...+++++..|+..+...
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e--~~~~~~a~~~~Gav~vpln 94 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPE--FLIAFLAALRAGAVAVPLN 94 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCEEEeecC
Confidence 45566665543332 78889888887776655532 35689998888886543 3356778888999999886
Q ss_pred C-CCHHHHHHHHHhcCccEeecccH
Q 041055 285 R-FDLQAMIEAIKTYQVNNIPLVPP 308 (526)
Q Consensus 285 ~-~~~~~~~~~i~~~~~t~~~~~P~ 308 (526)
. .....+...++..++..++....
T Consensus 95 ~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 95 PRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred cccCHHHHHHHHHhcCCeEEEEccc
Confidence 4 57889999999999999988877
No 189
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=38.88 E-value=1.1e+02 Score=30.35 Aligned_cols=62 Identities=21% Similarity=0.214 Sum_probs=40.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCC-----CCHHHHHHHHHhcCCeEEEE
Q 041055 91 LASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSI-----NTESEIVKQVRDSGAKLIIS 157 (526)
Q Consensus 91 lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 157 (526)
+...+.. +++++||.|.+-. +.|.....++...|+.++.++.. ...+.+...++. +.++|+.
T Consensus 59 L~~~l~a-l~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 59 LEMAALL-LDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHHHHH-cCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 3334444 6789999888743 45666677778889887776543 355667666643 5666654
No 190
>PLN02246 4-coumarate--CoA ligase
Probab=38.80 E-value=1.3e+02 Score=31.46 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=61.9
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc--hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL--YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
-.+|...+...+.....+....+++.++|++....+-... +...+++.+..|+.++..+. ...+++...+++.++.+
T Consensus 197 v~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~ 275 (537)
T PLN02246 197 VMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPK-FEIGALLELIQRHKVTI 275 (537)
T ss_pred EEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCC-CCHHHHHHHHHHhCceE
Confidence 3578888876655544433323678899999887765322 23446778889998888754 67888999999999998
Q ss_pred EEEcchhHHHh
Q 041055 155 IISASEELQKL 165 (526)
Q Consensus 155 ii~~~~~~~~~ 165 (526)
+...+..+..+
T Consensus 276 ~~~~p~~~~~l 286 (537)
T PLN02246 276 APFVPPIVLAI 286 (537)
T ss_pred EEcchHHHHHH
Confidence 88777655443
No 191
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=38.60 E-value=1.5e+02 Score=24.39 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccHH------HHHHHhhccCCCCCCCceEEEEec
Q 041055 261 FHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPPV------ILGLVKYCKDSSYLTSLRRVGSGA 333 (526)
Q Consensus 261 ~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~~l~~lr~v~~gG 333 (526)
.|..|........-..|..++... ..+++.+.+..++++++.+.++--+ +..+.+.. +...+...+ +++||
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l-~~~gl~~~~-vivGG 90 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKC-DEAGLEGIL-LYVGG 90 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHH-HHCCCCCCE-EEecC
Confidence 566666333333445677777775 4688999999999999987654311 33333321 223344443 77788
Q ss_pred CC-CCHHHHH----HHHHhCCCCceeeccccc
Q 041055 334 AP-LSKELAD----EFRAKFPWVELRQGYGLT 360 (526)
Q Consensus 334 ~~-l~~~~~~----~~~~~~~~~~l~~~yG~t 360 (526)
.+ ++++-.+ ++++. + +-..||..
T Consensus 91 ~~vi~~~d~~~~~~~l~~~--G--v~~vF~pg 118 (134)
T TIGR01501 91 NLVVGKQDFPDVEKRFKEM--G--FDRVFAPG 118 (134)
T ss_pred CcCcChhhhHHHHHHHHHc--C--CCEEECcC
Confidence 64 4554433 34433 3 44556544
No 192
>PLN02654 acetate-CoA ligase
Probab=38.31 E-value=1.2e+02 Score=32.75 Aligned_cols=80 Identities=16% Similarity=0.181 Sum_probs=61.1
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|.+.+...+..+...+ ..+.+++|++...+|..- .....+++++..|+..+.. +.+..+.+...++..++..++
T Consensus 120 ~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~--e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 120 SLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 478888887776665544 335789999999988643 2335677888889888766 578999999999999999998
Q ss_pred cccH
Q 041055 305 LVPP 308 (526)
Q Consensus 305 ~~P~ 308 (526)
....
T Consensus 198 ~~~~ 201 (666)
T PLN02654 198 TCNA 201 (666)
T ss_pred EcCc
Confidence 7654
No 193
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=38.29 E-value=1.3e+02 Score=20.42 Aligned_cols=46 Identities=11% Similarity=0.138 Sum_probs=30.5
Q ss_pred hHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHh
Q 041055 471 PAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTS 524 (526)
Q Consensus 471 ~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~ 524 (526)
...|++.|.+.|+|.++.+=.. .+ .+-|...+.. .+.++|.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~----~~---~v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLE----TK---TVTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETT----TT---EEEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECC----CC---EEEEEEecCC-CCHHHHHHHHHH
Confidence 3579999999999988766321 12 2334444443 677888888764
No 194
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.99 E-value=1.9e+02 Score=30.49 Aligned_cols=85 Identities=8% Similarity=-0.015 Sum_probs=62.7
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|+..+...+..+...+ ..+..++|++....+...- ....+++++..|+..+.. +.+..+.+...+++.++..++
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 134 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAI 134 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEE
Confidence 468888877766655444 2346788999888875433 335677888899988876 467899999999999999998
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
........+
T Consensus 135 ~~~~~~~~~ 143 (573)
T PRK05605 135 VWDKVAPTV 143 (573)
T ss_pred echhhHHHH
Confidence 877655444
No 195
>PRK05857 acyl-CoA synthetase; Validated
Probab=37.94 E-value=2.3e+02 Score=29.50 Aligned_cols=95 Identities=11% Similarity=0.009 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.|+.++++.. .|. ..+|.+.+...+..+...+ ..+..+++++...++...-+ ...+++++..|+..+..+
T Consensus 27 ~p~~~a~~~~-~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 27 QPEAIALRRC-DGT------SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCCcEEEeec-CCC------ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecC
Confidence 4566666533 221 3478888887776665544 23467889888888754432 256778888999888775
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHH
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPV 309 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~ 309 (526)
.++.+.+...++..++..++..+..
T Consensus 98 ~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred ccCCHHHHHHHHHhcCCceEEEeccc
Confidence 5688889999999998888876643
No 196
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=37.72 E-value=4.4e+02 Score=27.65 Aligned_cols=80 Identities=20% Similarity=0.143 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECC--CCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchhHH
Q 041055 86 RSIRSLASGLYHALGVRKGDVVFVLAP--NSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEELQ 163 (526)
Q Consensus 86 ~~~~~lA~~L~~~~gl~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 163 (526)
.+.-+.|.++....|+++.|+|-+.+| .+.-.++-+.+|+..|+++| +...+++..+-.-..+.++.++-.-.+...
T Consensus 265 ~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QYIGElcR 343 (649)
T KOG1179|consen 265 LRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQYIGELCR 343 (649)
T ss_pred HHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeehHHHHHH
Confidence 345556664444589999999999987 46778888999999999866 567899999999999999999877766555
Q ss_pred Hhh
Q 041055 164 KLT 166 (526)
Q Consensus 164 ~~~ 166 (526)
-+.
T Consensus 344 YLl 346 (649)
T KOG1179|consen 344 YLL 346 (649)
T ss_pred HHH
Confidence 443
No 197
>PRK13388 acyl-CoA synthetase; Provisional
Probab=36.85 E-value=2.5e+02 Score=29.38 Aligned_cols=83 Identities=7% Similarity=-0.053 Sum_probs=58.9
Q ss_pred HhhhHHHHHHHHHHhhhhc-ccC-CCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEe
Q 041055 227 ILTHANFISIMQLLRWTVD-VTH-AQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~-~~~-~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 303 (526)
.+|+..+...+..+...+. .+. .+++++...++...- ....+++++..|+..+..+ .+..+.+...+++.+++.+
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~--~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~ 103 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE--MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLL 103 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH--HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEE
Confidence 5688888776666554442 235 578888887775332 2256778888999888774 5678899999999999998
Q ss_pred ecccHHHH
Q 041055 304 PLVPPVIL 311 (526)
Q Consensus 304 ~~~P~~~~ 311 (526)
+.......
T Consensus 104 i~~~~~~~ 111 (540)
T PRK13388 104 VTDAEHRP 111 (540)
T ss_pred EEChhhhH
Confidence 87665443
No 198
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=36.73 E-value=15 Score=17.56 Aligned_cols=9 Identities=56% Similarity=1.173 Sum_probs=6.8
Q ss_pred ccccccccc
Q 041055 356 GYGLTESCG 364 (526)
Q Consensus 356 ~yG~tE~~~ 364 (526)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 589988754
No 199
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=36.43 E-value=3.6e+02 Score=28.58 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=63.3
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHH----HHHHHHHcCC--EEccCCC------CCCHHHHHH
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPS----ICLAIFSLGA--ILSPANS------INTESEIVK 145 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~----~~lA~~~~G~--~~v~l~~------~~~~~~l~~ 145 (526)
.....++.+.+.+++..+.+ +++|.|+..-..+-+. ++.+.-++|+ +...++. .++.+.+..
T Consensus 49 P~~l~~m~~a~~ri~~ai~~------~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~ 122 (575)
T PRK11070 49 WQQLSGIEKAVELLYNALRE------GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQ 122 (575)
T ss_pred hHHhhCHHHHHHHHHHHHHC------CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHH
Confidence 35577888888888877755 7899999988876543 3455667787 2222322 466777777
Q ss_pred HHHhcCCeEEEEcch------hHHHhhcCCCCEEEEcCCC
Q 041055 146 QVRDSGAKLIISASE------ELQKLTKVNVPIIVTSRDQ 179 (526)
Q Consensus 146 ~l~~~~~~~ii~~~~------~~~~~~~~~~~~i~~~~~~ 179 (526)
+.+ .+++++|+.+- ....+...++.+|+++.+.
T Consensus 123 ~~~-~~~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDHH~ 161 (575)
T PRK11070 123 AHA-RGAQLIVTVDNGISSHAGVAHAHALGIPVLVTDHHL 161 (575)
T ss_pred HHh-cCCCEEEEEcCCcCCHHHHHHHHHCCCCEEEECCCC
Confidence 665 47788887542 2333456788899988663
No 200
>PRK07798 acyl-CoA synthetase; Validated
Probab=36.29 E-value=2.7e+02 Score=28.73 Aligned_cols=85 Identities=11% Similarity=-0.073 Sum_probs=59.2
Q ss_pred HhhhHHHHHHHHHHhhhhc-ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTVD-VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+. .+..+++++...++... ......++++..|+..+..+ ....+.+...+++.++..++
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 4777777766666554442 24677888877776432 23355678888899888774 56788999999999999888
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
........+
T Consensus 106 ~~~~~~~~~ 114 (533)
T PRK07798 106 YEREFAPRV 114 (533)
T ss_pred EchhhHHHH
Confidence 776554443
No 201
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=36.27 E-value=2.5e+02 Score=28.72 Aligned_cols=70 Identities=13% Similarity=0.200 Sum_probs=46.5
Q ss_pred ceeCHHHHHHHHHHH--------------HHHHHHhcCCCCCCEEEEECCCCCchHHHHHH-HHHcCCEEccC-------
Q 041055 77 ERVTYAQLHRSIRSL--------------ASGLYHALGVRKGDVVFVLAPNSLLYPSICLA-IFSLGAILSPA------- 134 (526)
Q Consensus 77 ~~~Ty~el~~~~~~l--------------A~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l------- 134 (526)
..-||.+|.+.+..+ |..|...+++++||.| .+..++...-+ +...|++++-+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 455888998887644 4444444789999965 34445555555 78888877633
Q ss_pred -------CCCCCHHHHHHHHHhcC
Q 041055 135 -------NSINTESEIVKQVRDSG 151 (526)
Q Consensus 135 -------~~~~~~~~l~~~l~~~~ 151 (526)
.-.+..+.+...++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 33467888988887543
No 202
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=36.01 E-value=1.9e+02 Score=29.45 Aligned_cols=84 Identities=21% Similarity=0.188 Sum_probs=60.7
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|++.+...+... ... ++++++|++...++-... .+..+++.+..|+..+..+ .....++...+++.++.++.
T Consensus 160 ~~s~~~~~~~~~~~---~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 160 IQTYGNHWWSAVGS---ALN-LGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEecHHHHHHHHHH---HHh-cCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 57888776544322 223 688999999998875322 2334577788898877665 57789999999999999999
Q ss_pred EcchhHHHhh
Q 041055 157 SASEELQKLT 166 (526)
Q Consensus 157 ~~~~~~~~~~ 166 (526)
..+..+..+.
T Consensus 235 ~~P~~~~~l~ 244 (483)
T PRK03640 235 VVSTMLQRLL 244 (483)
T ss_pred eHHHHHHHHH
Confidence 8887666543
No 203
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=35.80 E-value=1.4e+02 Score=29.48 Aligned_cols=55 Identities=20% Similarity=0.209 Sum_probs=37.1
Q ss_pred cCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCC-----CCHHHHHHHHHhcCCeEEEE
Q 041055 99 LGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSI-----NTESEIVKQVRDSGAKLIIS 157 (526)
Q Consensus 99 ~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 157 (526)
+++++||.|.+-.+ .|.....++...|+.++.++.. ...+++...+.. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 67889998877544 4555566778889887776532 457777777654 5666653
No 204
>COG4451 RbcS Ribulose bisphosphate carboxylase small subunit [Energy production and conversion]
Probab=35.52 E-value=1.6e+02 Score=23.46 Aligned_cols=41 Identities=24% Similarity=0.345 Sum_probs=30.3
Q ss_pred ChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCC
Q 041055 470 APAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQ 512 (526)
Q Consensus 470 ~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~ 512 (526)
-..|+|+.+.+||+ .=.-++|. |+....+++-|||-+|+..
T Consensus 69 vlaele~Cr~dhp~-eYIRliGf-Dp~gkrrv~sfIVhRPng~ 109 (127)
T COG4451 69 VLAELEACRADHPG-EYIRLIGF-DPKGKRRVVSFIVHRPNGN 109 (127)
T ss_pred HHHHHHHHHHhCCC-CeEEEEEe-cCCCceEEEEEEEECCCCC
Confidence 35899999999996 34446666 4445678889999998743
No 205
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=35.12 E-value=2.4e+02 Score=29.47 Aligned_cols=86 Identities=9% Similarity=-0.022 Sum_probs=63.6
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++....+...-+ ...+++++..|+..+... ....+.+...+++.+++.++
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~ 123 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLV 123 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEE
Confidence 578888877766655544 23467888888887754433 356788888999888774 57889999999999999999
Q ss_pred cccHHHHHHH
Q 041055 305 LVPPVILGLV 314 (526)
Q Consensus 305 ~~P~~~~~l~ 314 (526)
........+.
T Consensus 124 ~~~~~~~~~~ 133 (542)
T PRK06155 124 VEAALLAALE 133 (542)
T ss_pred EChhhHHHHH
Confidence 8876665543
No 206
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=34.71 E-value=1e+02 Score=31.53 Aligned_cols=56 Identities=20% Similarity=0.248 Sum_probs=41.6
Q ss_pred CCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec----CCCHHHHHHHHHhcCccEeecccH
Q 041055 248 HAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ----RFDLQAMIEAIKTYQVNNIPLVPP 308 (526)
Q Consensus 248 ~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~ 308 (526)
..++|.++.--|-++..-. . .-..|..++-.+ ..+++.+-+.++.+++..++++|+
T Consensus 176 ~~pGd~v~vE~PtY~~~~~---~--~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ---A--LEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH---H--HHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 4689999998887775433 2 223466666553 578999999999999999999996
No 207
>PRK13383 acyl-CoA synthetase; Provisional
Probab=34.51 E-value=2e+02 Score=29.72 Aligned_cols=85 Identities=12% Similarity=0.070 Sum_probs=60.6
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++...++..- .....+++++..|+..+..+ .+..+.+...+++.++..++
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii 137 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVV 137 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEE
Confidence 467777776666655444 224678898888776433 23355677888899888775 56889999999999999999
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
..+.....+
T Consensus 138 ~~~~~~~~~ 146 (516)
T PRK13383 138 ADNEFAERI 146 (516)
T ss_pred EchhHHHHH
Confidence 877665544
No 208
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=34.37 E-value=2.5e+02 Score=26.66 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=45.6
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcch
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASE 160 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 160 (526)
.| +.+|++| +....+-.-..+.++|.+.|.-+..+-|...+......++..++++++++..
T Consensus 51 ~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 51 RGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred cCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 45 4677776 5556666667777888889988777766655566688899999999998764
No 209
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=34.32 E-value=1.5e+02 Score=31.64 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM- 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 283 (526)
.++.+|++.. +..+|. .-.+|.+.+...+..+...+ ..+..++|++...+|..- .....+++++..|+..+..
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~--e~v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIA--EAVFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEEecC
Confidence 3456665542 222221 12468888887776665544 235789999999988643 2335677888888887766
Q ss_pred cCCCHHHHHHHHHhcCccEeeccc
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
+.+..+.+...++..++..++...
T Consensus 140 ~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHHHHhcCceEEEECC
Confidence 567889999999999999888754
No 210
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=34.29 E-value=3.2e+02 Score=28.92 Aligned_cols=97 Identities=7% Similarity=0.040 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.++.++++.- .-.+|+..+...+..+...+ ..+..+++++...++-..- +...+++++..|+..+..+
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~--~v~~~lA~~~~G~~~v~l~ 118 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPE--YLAAWLGLAKLGAVVALLN 118 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecC
Confidence 3566666541 13478888877666654443 2346788988888775432 3356778888998888774
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHHHH
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVILGL 313 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 313 (526)
....+.+...+++.+++.++........+
T Consensus 119 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 119 TQQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 56788899999999999998776554433
No 211
>PRK07638 acyl-CoA synthetase; Validated
Probab=34.17 E-value=2.6e+02 Score=28.59 Aligned_cols=84 Identities=7% Similarity=0.099 Sum_probs=60.7
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|.+.+...+...+ .. .+++++|++....+-... ++..++..+..|+..+.. +...++++...+++.++.++.
T Consensus 162 ~~s~~~~~~~~~~~~---~~-~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 162 LRAQQSWLHSFDCNV---HD-FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEecHHHHHHHHHHH---Hh-cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 577777765554333 23 678999998877654432 345666778889887765 567889999999999999999
Q ss_pred EcchhHHHhh
Q 041055 157 SASEELQKLT 166 (526)
Q Consensus 157 ~~~~~~~~~~ 166 (526)
..+..+..+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 9887766554
No 212
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=34.14 E-value=2.5e+02 Score=29.36 Aligned_cols=97 Identities=10% Similarity=0.077 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.++.++++.... | ..+|+..+...+..+...+ ..+..+++++...++-..-+ ...+++++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY--GIVALGIMAAGGVFSGAN 111 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEeccCC
Confidence 456666653222 2 3578888877766655444 23467889888887754432 245678888999888664
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHH
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVIL 311 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~ 311 (526)
....+.+...+++.++..++..+..+.
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 467788999999999988877655443
No 213
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=33.78 E-value=93 Score=22.33 Aligned_cols=51 Identities=18% Similarity=0.406 Sum_probs=38.1
Q ss_pred HHHHHHHHhcCccEeecccHHHHHHHhhccCCCCCCCceEEEEecCCCCHHHHHHHHHhCCCCce
Q 041055 289 QAMIEAIKTYQVNNIPLVPPVILGLVKYCKDSSYLTSLRRVGSGAAPLSKELADEFRAKFPWVEL 353 (526)
Q Consensus 289 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~l 353 (526)
..+++.+.+++++.+. +..+-.++-..+.+.......+.+.++++||+..+
T Consensus 19 ~~i~~~l~~~~v~ii~--------------K~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIA--------------KDTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEE--------------EecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 5688888899988776 23334467777777777778888999999987654
No 214
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.36 E-value=3.7e+02 Score=28.73 Aligned_cols=83 Identities=11% Similarity=0.045 Sum_probs=57.6
Q ss_pred HhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCC---HHHHHHHHHhcCccE
Q 041055 227 ILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFD---LQAMIEAIKTYQVNN 302 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~---~~~~~~~i~~~~~t~ 302 (526)
.+|.+.+...+..+...+.-...++|++...++-.. .+...+++++..|+.++.. +... .+.+...++..++..
T Consensus 55 ~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 55 DLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNL--DYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred EeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCh--HHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 468888877766665554322578899888887643 3335667888899888765 3222 467888899999998
Q ss_pred eecccHHHH
Q 041055 303 IPLVPPVIL 311 (526)
Q Consensus 303 ~~~~P~~~~ 311 (526)
++.......
T Consensus 133 vi~~~~~~~ 141 (631)
T PRK07769 133 ILTTTDSAE 141 (631)
T ss_pred EEEChHHHH
Confidence 888765543
No 215
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=33.19 E-value=4.1e+02 Score=28.94 Aligned_cols=102 Identities=13% Similarity=0.123 Sum_probs=70.9
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|.+.+...+..+...+ ..+..+++++...++-..- +....++++..|+..+.. +.+.++.+...++..++..++
T Consensus 106 ~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 106 WITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 467887777766655443 3357789988887765332 224566788888888866 567899999999999999999
Q ss_pred cccHHHHHHHhhccCCCCCCCceEEEEec
Q 041055 305 LVPPVILGLVKYCKDSSYLTSLRRVGSGA 333 (526)
Q Consensus 305 ~~P~~~~~l~~~~~~~~~l~~lr~v~~gG 333 (526)
.....+..+.+.. ..++.++.+++-+
T Consensus 184 ~~~~~~~~l~~~~---~~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDIS---SQLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHh---hccCCceEEEEEC
Confidence 8877776665432 2234566665544
No 216
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=32.96 E-value=34 Score=21.99 Aligned_cols=23 Identities=22% Similarity=0.433 Sum_probs=20.1
Q ss_pred eEEEEecCCCCHHHHHHHHHhCC
Q 041055 327 RRVGSGAAPLSKELADEFRAKFP 349 (526)
Q Consensus 327 r~v~~gG~~l~~~~~~~~~~~~~ 349 (526)
+.+.++|.|++.+..+.++..|+
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~ 44 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFG 44 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHh
Confidence 66889999999999999988873
No 217
>PRK07514 malonyl-CoA synthase; Validated
Probab=32.53 E-value=2.9e+02 Score=28.33 Aligned_cols=85 Identities=9% Similarity=-0.009 Sum_probs=61.0
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++....+... .....+++++..|+..+..+ ......+...++..+++.++
T Consensus 28 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 28 RYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 567777766665554443 234678999888877543 33356778888999888775 56788999999999999988
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 877655443
No 218
>PLN02614 long-chain acyl-CoA synthetase
Probab=32.50 E-value=2.6e+02 Score=30.25 Aligned_cols=85 Identities=13% Similarity=-0.060 Sum_probs=62.2
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|+..+...+..+...+ ..+..++|++...++...- +....++++..|+..+... .+..+.+...+++.++..++
T Consensus 79 ~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 79 WQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE--WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 357888877766655544 2357889999888875443 2255678888898888764 67889999999999999999
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
.....+..+
T Consensus 157 ~~~~~~~~~ 165 (666)
T PLN02614 157 VEEKKISEL 165 (666)
T ss_pred ECHHHHHHH
Confidence 876655444
No 219
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=32.36 E-value=1.2e+02 Score=21.33 Aligned_cols=46 Identities=15% Similarity=0.168 Sum_probs=30.7
Q ss_pred eChHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCCCCCCCHHHHHHHHHh
Q 041055 469 VAPAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAAGSQLTEDQVMQFVTS 524 (526)
Q Consensus 469 v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~l~~~l~~ 524 (526)
-...++.+.|.++|+|.+|..+.-.. -.++.+..+ +.+++.+++.+
T Consensus 10 ~~~~~~~~~l~~~p~V~~~~~vtG~~-----d~~~~v~~~-----d~~~l~~~i~~ 55 (74)
T PF01037_consen 10 DAYDEFAEALAEIPEVVECYSVTGEY-----DLILKVRAR-----DMEELEEFIRE 55 (74)
T ss_dssp THHHHHHHHHHTSTTEEEEEEESSSS-----SEEEEEEES-----SHHHHHHHHHH
T ss_pred chHHHHHHHHHcCCCEEEEEEEeCCC-----CEEEEEEEC-----CHHHHHHHHHH
Confidence 34578899999999999999885322 244444432 34667777554
No 220
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=32.20 E-value=1.3e+02 Score=29.68 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=45.9
Q ss_pred EECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcchh
Q 041055 109 VLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASEE 161 (526)
Q Consensus 109 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 161 (526)
+++.-+-....+.+++.++|..+..+-|..++....+.+++.++.+++.....
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 44555667788999999999999999999999999999999999999987653
No 221
>PRK08308 acyl-CoA synthetase; Validated
Probab=32.20 E-value=2.3e+02 Score=28.19 Aligned_cols=84 Identities=14% Similarity=0.174 Sum_probs=60.8
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC--chHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL--LYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
-.+|++.+...+..+.. . +++..+|++...++-.- .++..++.++..|+..+... ...++.+...+++.++.+
T Consensus 119 v~~s~~~l~~~~~~~~~---~-~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~ 193 (414)
T PRK08308 119 IRRSWTEIDREIEAYNE---A-LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHI 193 (414)
T ss_pred EEEehHhHHHHHHHHHH---h-hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeE
Confidence 35899888766655443 2 56788898887776543 33456788889998877664 456788888999999999
Q ss_pred EEEcchhHHHh
Q 041055 155 IISASEELQKL 165 (526)
Q Consensus 155 ii~~~~~~~~~ 165 (526)
++..+..+..+
T Consensus 194 ~~~~P~~~~~l 204 (414)
T PRK08308 194 LYAVPLMLHIL 204 (414)
T ss_pred EEcCHHHHHHH
Confidence 88877666544
No 222
>PRK11761 cysM cysteine synthase B; Provisional
Probab=31.48 E-value=2.5e+02 Score=26.68 Aligned_cols=89 Identities=15% Similarity=0.098 Sum_probs=56.7
Q ss_pred ceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHH
Q 041055 67 RVALIDSATHERVTYAQLHRSIRSLASGLYHALG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVK 145 (526)
Q Consensus 67 ~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 145 (526)
++-+.....+.+=||+.- -+..+...+.+ .| +.+|+.|.. ...+-.-..+.++|...|.-+..+-|...+.....
T Consensus 28 ~i~~K~E~~nptGS~K~R--~a~~~~~~a~~-~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 103 (296)
T PRK11761 28 TILAKLEGNNPAGSVKDR--PALSMIVQAEK-RGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRA 103 (296)
T ss_pred EEEEEEcccCCCCCchhH--HHHHHHHHHHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 344443222334466652 22223333334 45 467776544 55566677777888899987777766666677888
Q ss_pred HHHhcCCeEEEEcc
Q 041055 146 QVRDSGAKLIISAS 159 (526)
Q Consensus 146 ~l~~~~~~~ii~~~ 159 (526)
.++..+++++++..
T Consensus 104 ~~~~~GA~v~~~~~ 117 (296)
T PRK11761 104 AMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCEEEEeCC
Confidence 99999999999985
No 223
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=31.44 E-value=2.7e+02 Score=29.67 Aligned_cols=102 Identities=11% Similarity=0.035 Sum_probs=67.8
Q ss_pred CCCEEEEEcC--CCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-
Q 041055 207 QDDTAAILYS--SGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM- 283 (526)
Q Consensus 207 ~~~~a~i~~T--SGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 283 (526)
++.++++... .+++|. ...+|...+...+..+...+.-...++|++...++... .+...+++++..|+..+..
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~--e~~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGI--DYVAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCCh--hHHHHHHHHHHcCceeEecC
Confidence 4666765421 112232 23478888887776665555333578999988888654 3335677888999988866
Q ss_pred cC-CC--HHHHHHHHHhcCccEeecccHHHHH
Q 041055 284 QR-FD--LQAMIEAIKTYQVNNIPLVPPVILG 312 (526)
Q Consensus 284 ~~-~~--~~~~~~~i~~~~~t~~~~~P~~~~~ 312 (526)
+. .. .+.+...++..++..++..+..+..
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 32 22 6788899999999999887665543
No 224
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=31.41 E-value=68 Score=23.40 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=34.0
Q ss_pred HHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCE
Q 041055 92 ASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAI 130 (526)
Q Consensus 92 A~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 130 (526)
..+|.+..|++.|+.++.+.....|.+..+=+++++.-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV 41 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADV 41 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhce
Confidence 456777789999999999999999999999999998744
No 225
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=30.94 E-value=3.7e+02 Score=31.27 Aligned_cols=100 Identities=13% Similarity=0.025 Sum_probs=70.2
Q ss_pred CCCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhcccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 205 LTQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVDVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 205 ~~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
..++.++++.. .| -.+|.+.+...+..+...+.-...++|++...+|...-+- ...++++..|+..+..+
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~--~~~la~~~~G~v~v~l~ 696 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGA--LANLALLLAGKVPVNLN 696 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHH--HHHHHHHHcCCEEEEeC
Confidence 35677777532 12 1478888877766655554323578899988887654332 45678888999887764
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHHHHH
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVILGLV 314 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 314 (526)
....+++...+++.+++.++..+.....+.
T Consensus 697 ~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 697 YTASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CCcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 567899999999999999998877665553
No 226
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.69 E-value=2.7e+02 Score=28.96 Aligned_cols=86 Identities=5% Similarity=-0.021 Sum_probs=62.0
Q ss_pred HhhhHHHHHHHHHHhhhhc-c-cCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEe
Q 041055 227 ILTHANFISIMQLLRWTVD-V-THAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~-~-~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 303 (526)
.+|+..+...+..+...+. . +..+++++...++... .+...+++++..|+..+... ....+.+...+++.+++.+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 3677777766655544432 2 4678898888877543 33366788888999888774 5688899999999999999
Q ss_pred ecccHHHHHHH
Q 041055 304 PLVPPVILGLV 314 (526)
Q Consensus 304 ~~~P~~~~~l~ 314 (526)
+..+.....+.
T Consensus 113 i~~~~~~~~~~ 123 (546)
T PRK08314 113 IVGSELAPKVA 123 (546)
T ss_pred EEccchhhhHH
Confidence 88776655443
No 227
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=30.68 E-value=3.8e+02 Score=28.86 Aligned_cols=79 Identities=10% Similarity=0.036 Sum_probs=59.7
Q ss_pred HhhhHHHHHHHHHHhhhhc-ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTVD-VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|.+.+...+..+...+. .+..++|++...+|...-+- ..+++++..|+..+.. +.+..+.+...+++.++..++
T Consensus 114 ~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~--~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 114 PVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAV--VAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 4788888877766665542 35789999999998754322 5567788888887766 467899999999999999888
Q ss_pred ccc
Q 041055 305 LVP 307 (526)
Q Consensus 305 ~~P 307 (526)
...
T Consensus 192 ~~~ 194 (652)
T TIGR01217 192 TVD 194 (652)
T ss_pred Ecc
Confidence 754
No 228
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=30.45 E-value=2.4e+02 Score=30.35 Aligned_cols=80 Identities=15% Similarity=0.108 Sum_probs=61.3
Q ss_pred HHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEe
Q 041055 226 VILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 226 v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 303 (526)
..+|.+.+...+..+...+ ..+..++|++...+|..--+- ..++++...|+..+.. +.+..+.+...++..+++.+
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL--IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 3578888887777766554 345789999999998644322 4567788888887766 57899999999999999999
Q ss_pred eccc
Q 041055 304 PLVP 307 (526)
Q Consensus 304 ~~~P 307 (526)
+...
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 8764
No 229
>PRK09088 acyl-CoA synthetase; Validated
Probab=30.43 E-value=3.7e+02 Score=27.40 Aligned_cols=93 Identities=11% Similarity=0.006 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc-ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD-VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.++.++++....| ..+|...+...+..+...+. .+..+++++...++...- +...+++++..|+..+..+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW--LVALHFACARVGAIYVPLN 78 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEEeeC
Confidence 4556665543333 24688888776665554432 246778888888775443 2245678888898888774
Q ss_pred -CCCHHHHHHHHHhcCccEeeccc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
....+.+...+++.+++.++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcc
Confidence 56888999999999999887654
No 230
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=30.28 E-value=2e+02 Score=21.70 Aligned_cols=66 Identities=18% Similarity=0.129 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCC---------CCCCEEEEEC-CCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHH
Q 041055 81 YAQLHRSIRSLASGLYHALGV---------RKGDVVFVLA-PNSLLYPSICLAIFSLGAILSPANSINTESEIVKQV 147 (526)
Q Consensus 81 y~el~~~~~~lA~~L~~~~gl---------~~gd~V~i~~-~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 147 (526)
..+.-+|..++...+.+ .|. ++=|.|.|+- |+......+.+++...|.+-.-.-+.++.+++..++
T Consensus 15 ~~~~~~R~~a~~~~~e~-~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 15 IKDSPDRAEAVRALIEA-LGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred HhhcHHHHHHHHHHHHH-cCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 33445555655555554 663 4457788775 544555667788999997766667778888887765
No 231
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=30.08 E-value=2.2e+02 Score=29.91 Aligned_cols=81 Identities=11% Similarity=0.103 Sum_probs=59.7
Q ss_pred HhhhHHHHHHHHHHhhhhc--ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEe
Q 041055 227 ILTHANFISIMQLLRWTVD--VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~--~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 303 (526)
.+|...+...+..+...+. .+..++|++...++... .+...+++++..|+..+... .+..+.+...+++.++..+
T Consensus 49 ~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~--e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 49 TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVL--QYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 5788888777766665553 24678999988877543 33356778888998888664 5678899999999999988
Q ss_pred ecccHH
Q 041055 304 PLVPPV 309 (526)
Q Consensus 304 ~~~P~~ 309 (526)
+..+..
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 232
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=30.03 E-value=2.6e+02 Score=27.66 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=47.7
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
.| +++|....+....+-.-+.+.++|...|.-+..+-|.....+-...++..++++++++.
T Consensus 104 ~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 104 KNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 45 67785555556677777888889999998877777776777778999999999999864
No 233
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=29.85 E-value=1.9e+02 Score=20.06 Aligned_cols=34 Identities=26% Similarity=0.549 Sum_probs=26.2
Q ss_pred ceEEEeccccccccCCCHHHHhcccCCCCeeeccceEEEcCCCcEEEEc
Q 041055 408 GELWLKSPTIMRGYFGNEEATAAAFDEDGWLKTGDLCYFDGEGFLYIVD 456 (526)
Q Consensus 408 Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~~TGD~~~~~~~G~l~~~G 456 (526)
|.+|++-.+- ..|-|+..||-..+...+.+++-+
T Consensus 25 G~vWlT~~g~---------------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGD---------------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCC---------------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 8899985331 157799999999998888887755
No 234
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=29.75 E-value=2.5e+02 Score=29.32 Aligned_cols=98 Identities=11% Similarity=-0.022 Sum_probs=69.8
Q ss_pred EEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhhc--ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCC
Q 041055 210 TAAILYSSGTTGTSKGVILTHANFISIMQLLRWTVD--VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRF 286 (526)
Q Consensus 210 ~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~--~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~ 286 (526)
...++|-+-.++. -.+|.+.+......+...+. .+. ++|++..++|..--.- ..++++...|+..... +.|
T Consensus 26 ~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~--~a~LA~~riGAI~~~vf~~f 99 (528)
T COG0365 26 DTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAV--IALLATARIGAIPAVVSPGL 99 (528)
T ss_pred ceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHH--HHHHHHHHcCCEEeecccCC
Confidence 3445555444343 46788888887777666663 234 8999999999755433 4567777888765544 679
Q ss_pred CHHHHHHHHHhcCccEeecccHHHHHH
Q 041055 287 DLQAMIEAIKTYQVNNIPLVPPVILGL 313 (526)
Q Consensus 287 ~~~~~~~~i~~~~~t~~~~~P~~~~~l 313 (526)
.++.+...+.+.++..++.....++..
T Consensus 100 ~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 100 SAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CHHHHHHHHHccCCCEEEEeccccccc
Confidence 999999999999999999776665544
No 235
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=29.55 E-value=2.5e+02 Score=33.51 Aligned_cols=99 Identities=13% Similarity=0.081 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.|+.+|++...+...+......+|++.+...+..+...+ ..+..+++++...++-..- +...+++++..|+..+..+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~--~i~~~lA~l~~G~~~vpld 326 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVD--LVVAVMGVLKAGATFSVID 326 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHH--HHHHHHHHHhhCcEEeccC
Confidence 567777765332110111133578888887777666544 2346788988888875433 3356788899999988775
Q ss_pred -CCCHHHHHHHHHhcCccEeecc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLV 306 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~ 306 (526)
...++.+...++..++..++..
T Consensus 327 p~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 327 PAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCCcHHHHHHHHHhcCCCEEEEe
Confidence 4667788888888888877654
No 236
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=29.42 E-value=1e+02 Score=17.16 Aligned_cols=18 Identities=22% Similarity=0.534 Sum_probs=14.4
Q ss_pred EcCCCcEEEEccccceEE
Q 041055 446 FDGEGFLYIVDRIKELIK 463 (526)
Q Consensus 446 ~~~~G~l~~~GR~~d~ik 463 (526)
++++|.+|+.++....|+
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 358899999998877765
No 237
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.38 E-value=1.7e+02 Score=30.47 Aligned_cols=86 Identities=12% Similarity=0.032 Sum_probs=58.6
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|...+...+ .+..+....++.++|++..+.+-.-. ....+++++..|+..+...+....+.+...+++.++..+.
T Consensus 195 ~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~ 272 (539)
T PRK07008 195 LYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSA 272 (539)
T ss_pred EEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEE
Confidence 56766654322 22233333678899998877664322 2333467788998887766777889999999999999988
Q ss_pred EcchhHHHh
Q 041055 157 SASEELQKL 165 (526)
Q Consensus 157 ~~~~~~~~~ 165 (526)
..+..+..+
T Consensus 273 ~~P~~~~~l 281 (539)
T PRK07008 273 GVPTVWLGL 281 (539)
T ss_pred echHHHHHH
Confidence 877766544
No 238
>PRK13391 acyl-CoA synthetase; Provisional
Probab=29.26 E-value=5.6e+02 Score=26.31 Aligned_cols=98 Identities=11% Similarity=0.028 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.|+.++++...++ -.+|...+...+..+...+ ..+..+++++....+...-+ ...+++++..|+.++..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccc
Confidence 4566776655443 1367777766655554433 22467788888777754432 245678888999888774
Q ss_pred -CCCHHHHHHHHHhcCccEeecccHHHHH
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVPPVILG 312 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 312 (526)
..+...+...++..++..++..+.....
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 5678899999999999988887765443
No 239
>PF00101 RuBisCO_small: Ribulose bisphosphate carboxylase, small chain; InterPro: IPR000894 RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) is a bifunctional enzyme that catalyses both the carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP) [], thus fixing carbon dioxide as the first step of the Calvin cycle. RuBisCO is the major protein in the stroma of chloroplasts, and in higher plants exists as a complex of 8 large and 8 small subunits. The function of the small subunit is unknown []. While the large subunit is coded for by a single gene, the small subunit is coded for by several different genes, which are distributed in a tissue specific manner. They are transcriptionally regulated by light receptor phytochrome [], which results in RuBisCO being more abundant during the day when it is required. The RuBisCo small subunit consists of a central four-stranded beta-sheet, with two helices packed against it [].; PDB: 1BWV_W 1IWA_P 3AXM_X 1WDD_S 3AXK_T 1IR2_K 1RBL_N 1UZH_J 1RSC_P 1UW9_C ....
Probab=29.24 E-value=1.7e+02 Score=22.67 Aligned_cols=37 Identities=27% Similarity=0.435 Sum_probs=28.7
Q ss_pred hHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC
Q 041055 471 PAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 471 ~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
..|||+.+.+||+ .-+-++|+... ...+.+.+|+-+|
T Consensus 62 l~el~~c~~~~p~-~yVRlig~D~~-~q~r~~~~iVqRP 98 (99)
T PF00101_consen 62 LAELEACLAEHPG-EYVRLIGFDNK-RQRRVLEFIVQRP 98 (99)
T ss_dssp HHHHHHHHHHSTT-SEEEEEEEETT-TTEEEEEEEEEGG
T ss_pred HHHHHHHHHhCCC-ceEEEEEEcCc-ccEEEEEEEEECC
Confidence 4789999999997 55667787654 4678889998776
No 240
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=29.14 E-value=3.2e+02 Score=25.96 Aligned_cols=61 Identities=23% Similarity=0.264 Sum_probs=45.6
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcch
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASE 160 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 160 (526)
.| +.+|+.| +....+-.-..+.++|...|.-+..+-|...+......++..++++++++.+
T Consensus 52 ~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 52 RGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred cCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 45 3677766 4566666777777888899988777767665566778899999999998754
No 241
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=28.90 E-value=3.5e+02 Score=28.36 Aligned_cols=90 Identities=12% Similarity=0.082 Sum_probs=68.3
Q ss_pred HHHhhhHHHHHHHHHHhhhhc---ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCc
Q 041055 225 GVILTHANFISIMQLLRWTVD---VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQV 300 (526)
Q Consensus 225 ~v~~sh~~l~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~ 300 (526)
+..+|++.+...+..++..+. ++..++|++....|...-+. ...+++...|+.+... +.++...+...++.-++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~ 120 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKP 120 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCcccCHHHHHHHHHhcCC
Confidence 667888888877666655543 23678999999999755444 4566778888887766 46799999999999999
Q ss_pred cEeecccHHHHHHHhh
Q 041055 301 NNIPLVPPVILGLVKY 316 (526)
Q Consensus 301 t~~~~~P~~~~~l~~~ 316 (526)
..++.....+..+...
T Consensus 121 kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 121 KLIFVDEDFYDKISEA 136 (537)
T ss_pred eEEEEcCchHHHHHHH
Confidence 9999988777766544
No 242
>PRK07470 acyl-CoA synthetase; Validated
Probab=28.84 E-value=4.8e+02 Score=26.97 Aligned_cols=86 Identities=20% Similarity=0.113 Sum_probs=55.1
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccC-CCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPA-NSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|.+.+...+......+. .+..++|++..+++-...+-...+..+..|+..+.+ ....+.+.+...+++.++.++.
T Consensus 182 ~~s~~~l~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 182 VLTHGQMAFVITNHLADLM--PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEehhhHHHHHHHHHHHhc--cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 5788777543332111111 267788988888876544333333344556554443 3457888999999999999999
Q ss_pred EcchhHHHh
Q 041055 157 SASEELQKL 165 (526)
Q Consensus 157 ~~~~~~~~~ 165 (526)
..+..+..+
T Consensus 260 ~~P~~~~~l 268 (528)
T PRK07470 260 TVPTILKML 268 (528)
T ss_pred chHHHHHHH
Confidence 888777654
No 243
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=28.30 E-value=2.3e+02 Score=30.23 Aligned_cols=97 Identities=16% Similarity=0.107 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM- 283 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~- 283 (526)
.++.+|++.. +..+|. .-.+|.+.+...+..+...+ ..+..++|++...+|..-- ....+++++..|+..+..
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAE--AAFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH--HHHHHHHHHHhCcEEEeeC
Confidence 3566665542 222222 12468888877666655444 2357889999999886432 225567888888887766
Q ss_pred cCCCHHHHHHHHHhcCccEeeccc
Q 041055 284 QRFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 284 ~~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
+.+..+.+...++..++..++...
T Consensus 141 ~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcc
Confidence 567889999999999999888754
No 244
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=28.09 E-value=4.5e+02 Score=24.32 Aligned_cols=69 Identities=13% Similarity=0.177 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhcC-CCCCCEEEEECCCCCchHHHHHHHHHc------C--CEEccCCCCC---CHHHHHHHHHhcCCeEE
Q 041055 88 IRSLASGLYHALG-VRKGDVVFVLAPNSLLYPSICLAIFSL------G--AILSPANSIN---TESEIVKQVRDSGAKLI 155 (526)
Q Consensus 88 ~~~lA~~L~~~~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~i 155 (526)
.+++.+.+.+ .+ +.+|++|++...-+.+..+++..+... + ..++-++... ..+.+..+.+..+..+.
T Consensus 13 ~~~v~~~i~~-~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 13 RRQVGQAIAD-FNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHH-cCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3445556665 55 678999999999999998887766442 2 3444555432 33434455555555544
Q ss_pred EE
Q 041055 156 IS 157 (526)
Q Consensus 156 i~ 157 (526)
+.
T Consensus 92 v~ 93 (258)
T PRK10696 92 IE 93 (258)
T ss_pred EE
Confidence 43
No 245
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=27.74 E-value=3.5e+02 Score=28.13 Aligned_cols=78 Identities=9% Similarity=0.012 Sum_probs=56.9
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++...+|... .....+++++..|+..+..+ .+..+.+...++..++..++
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC--EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 468888877666655443 235778999988887543 33356788889999888764 56788888999999988877
Q ss_pred cc
Q 041055 305 LV 306 (526)
Q Consensus 305 ~~ 306 (526)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 64
No 246
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=27.33 E-value=3.3e+02 Score=28.06 Aligned_cols=84 Identities=8% Similarity=0.009 Sum_probs=59.1
Q ss_pred hhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeec
Q 041055 228 LTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPL 305 (526)
Q Consensus 228 ~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 305 (526)
+|...+...+..+...+ ..+..+++++....+... .+...+++++..|+..+... ....+.+...+++.+++.++.
T Consensus 12 ~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 12 RSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDF--AFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred ecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 56666665555544433 234678999888877533 33356778888899888774 568899999999999999987
Q ss_pred ccHHHHHH
Q 041055 306 VPPVILGL 313 (526)
Q Consensus 306 ~P~~~~~l 313 (526)
.......+
T Consensus 90 ~~~~~~~~ 97 (509)
T PRK12406 90 HADLLHGL 97 (509)
T ss_pred ccchhhhh
Confidence 76655544
No 247
>PRK08162 acyl-CoA synthetase; Validated
Probab=27.26 E-value=2.9e+02 Score=28.77 Aligned_cols=85 Identities=11% Similarity=0.071 Sum_probs=62.3
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++...++-.. .+...+++++..|+..+... ..+.+.+...++..+++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~--~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIP--AMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCch--HHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 378888877766655444 224678999988887644 33356778888898887764 57889999999999999998
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
..+.....+
T Consensus 121 ~~~~~~~~~ 129 (545)
T PRK08162 121 VDTEFAEVA 129 (545)
T ss_pred EccchhhHH
Confidence 877665443
No 248
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=27.22 E-value=3.1e+02 Score=28.19 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=61.0
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc--hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL--YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
-.+|+..+...+... .....+++++|++....+-... +...+++.+..|+..+..+.......+...+++.++.+
T Consensus 179 v~~s~~~~~~~~~~~---~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~ 255 (508)
T TIGR02262 179 VVHTHSNPYWTAELY---ARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTI 255 (508)
T ss_pred EEEechhHHHHHHHH---hHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcE
Confidence 357888776654432 2233689999998877765443 33456677888988877776678889999999999999
Q ss_pred EEEcchhHHH
Q 041055 155 IISASEELQK 164 (526)
Q Consensus 155 ii~~~~~~~~ 164 (526)
+...+.....
T Consensus 256 ~~~~P~~~~~ 265 (508)
T TIGR02262 256 FYGVPTLYAA 265 (508)
T ss_pred EecchHHHHH
Confidence 9888765443
No 249
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=26.82 E-value=1.1e+02 Score=23.96 Aligned_cols=39 Identities=23% Similarity=0.225 Sum_probs=29.5
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCC
Q 041055 90 SLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGA 129 (526)
Q Consensus 90 ~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 129 (526)
.+...+.. +|+.+++.|.+++.++.....+.+.+..+|.
T Consensus 65 ~~~~~~~~-~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 65 ELRALFAA-LGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHH-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 45555655 8888999999999888777777777777775
No 250
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=26.68 E-value=2.2e+02 Score=22.71 Aligned_cols=84 Identities=17% Similarity=0.114 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeecccH---H---HHHHHhhccCCCCCCCceEEEEec
Q 041055 261 FHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPLVPP---V---ILGLVKYCKDSSYLTSLRRVGSGA 333 (526)
Q Consensus 261 ~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~---~---~~~l~~~~~~~~~l~~lr~v~~gG 333 (526)
.|..|........-..|-.++... ...++.+.+.+.+.+++++.+.-. . +..+++... ......++ ++.||
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~-~~~~~~i~-i~~GG 88 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLR-ELGAGDIL-VVGGG 88 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHH-hcCCCCCE-EEEEC
Confidence 566776444444555677777775 457889999999999998877532 2 222222211 12223344 55666
Q ss_pred CCCCHHHHHHHHHh
Q 041055 334 APLSKELADEFRAK 347 (526)
Q Consensus 334 ~~l~~~~~~~~~~~ 347 (526)
.. +++..+++.+.
T Consensus 89 ~~-~~~~~~~~~~~ 101 (122)
T cd02071 89 II-PPEDYELLKEM 101 (122)
T ss_pred CC-CHHHHHHHHHC
Confidence 54 45555555554
No 251
>PRK13390 acyl-CoA synthetase; Provisional
Probab=26.59 E-value=5.5e+02 Score=26.27 Aligned_cols=93 Identities=11% Similarity=0.029 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCCCCCCCchHHHhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec
Q 041055 206 TQDDTAAILYSSGTTGTSKGVILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ 284 (526)
Q Consensus 206 ~~~~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~ 284 (526)
.|+.++++... +| ..+|...+...+..+...+ ..+..++|++....+...- ....+++++..|+..+...
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~--~~~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPE--ALVVLWAALRSGLYITAIN 80 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEeccc
Confidence 45666665432 22 2478888877766655544 2346788988887775443 3356778888898887664
Q ss_pred -CCCHHHHHHHHHhcCccEeeccc
Q 041055 285 -RFDLQAMIEAIKTYQVNNIPLVP 307 (526)
Q Consensus 285 -~~~~~~~~~~i~~~~~t~~~~~P 307 (526)
.+.++.+...++..++..+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~ 104 (501)
T PRK13390 81 HHLTAPEADYIVGDSGARVLVASA 104 (501)
T ss_pred cCCCHHHHHHHHHhcCCcEEEEcc
Confidence 56788888899888888877654
No 252
>PRK06164 acyl-CoA synthetase; Validated
Probab=26.49 E-value=3.2e+02 Score=28.41 Aligned_cols=84 Identities=20% Similarity=0.207 Sum_probs=61.8
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|...+...+..++.. +++.+++++...+|-.-. .+..+++++..|+..+.. +......+...+++.++.+++
T Consensus 200 ~~s~~~l~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~~~ 274 (540)
T PRK06164 200 LHRQATLLRHARAIARA----YGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PVFDAARTARALRRHRVTHTF 274 (540)
T ss_pred EEehHHHHHHHHHHHHh----cCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeeec
Confidence 57888887666554433 577899999988876422 244578888888887765 456788899999999999998
Q ss_pred EcchhHHHhh
Q 041055 157 SASEELQKLT 166 (526)
Q Consensus 157 ~~~~~~~~~~ 166 (526)
..+..+..+.
T Consensus 275 ~~p~~l~~l~ 284 (540)
T PRK06164 275 GNDEMLRRIL 284 (540)
T ss_pred CCHHHHHHHH
Confidence 8877665543
No 253
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=26.20 E-value=2.9e+02 Score=26.39 Aligned_cols=60 Identities=20% Similarity=0.214 Sum_probs=45.0
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
.| +++|+.| |=...+---+...+.|...|.-++.+-|..-..+.+.+|+..++.++++..
T Consensus 56 ~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 35 8899843 333334445666677778898888877777777889999999999999987
No 254
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=25.66 E-value=1e+02 Score=24.56 Aligned_cols=17 Identities=6% Similarity=0.055 Sum_probs=13.6
Q ss_pred CcccccCCCcEEEEEeC
Q 041055 380 GSCGALSPTFYAKVVDT 396 (526)
Q Consensus 380 ~~~G~~~~~~~~~ivd~ 396 (526)
-..|+|.+++++.+..-
T Consensus 18 ta~GkPAagv~V~L~rl 34 (124)
T COG2351 18 TASGKPAAGVKVELYRL 34 (124)
T ss_pred cccCCcCCCCEEEEEEe
Confidence 46899999999988553
No 255
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=25.55 E-value=2e+02 Score=25.08 Aligned_cols=48 Identities=15% Similarity=0.010 Sum_probs=34.2
Q ss_pred CceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHH
Q 041055 76 HERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIF 125 (526)
Q Consensus 76 ~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~ 125 (526)
...+||.|+.+.+.++|..+.+.++. .+.+.+...++...++..+|-.
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~~~~--~~~viV~i~~gg~~~A~~La~~ 61 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITADLAD--ENPLVLCVMGGGLVFTGQLLPR 61 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHHcCC--CCeEEEEECCCcHHHHHHHHHH
Confidence 45689999999999999999874332 2345566666666666666543
No 256
>PRK05852 acyl-CoA synthetase; Validated
Probab=25.44 E-value=5.3e+02 Score=26.71 Aligned_cols=85 Identities=16% Similarity=0.141 Sum_probs=60.5
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC--chHHHHHHHHHcCCEEcc-CCCCCCHHHHHHHHHhcCCeE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL--LYPSICLAIFSLGAILSP-ANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 154 (526)
.+|...+...+..+.. .++++++|++..+.+... .+...+++++..|...+. -...++...+...+++.++..
T Consensus 195 ~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 195 PWTHANIASSVRAIIT----GYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EecHHHHHHHHHHHHH----HhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 5788888766655443 257889998888776543 345567777777776443 334567888899999999999
Q ss_pred EEEcchhHHHhh
Q 041055 155 IISASEELQKLT 166 (526)
Q Consensus 155 ii~~~~~~~~~~ 166 (526)
++..+..+..+.
T Consensus 271 ~~~~P~~~~~l~ 282 (534)
T PRK05852 271 YTAVPTIHQILL 282 (534)
T ss_pred EEcChHHHHHHH
Confidence 988877665543
No 257
>PRK13382 acyl-CoA synthetase; Provisional
Probab=25.33 E-value=4.5e+02 Score=27.32 Aligned_cols=82 Identities=12% Similarity=0.045 Sum_probs=59.1
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++...++...- +...+++++..|+.++... ....+.+...+++.+++.++
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 145 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVI 145 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEE
Confidence 467777776666655544 2346788988888875433 3366788889999988775 46778899999999999888
Q ss_pred cccHHH
Q 041055 305 LVPPVI 310 (526)
Q Consensus 305 ~~P~~~ 310 (526)
......
T Consensus 146 ~~~~~~ 151 (537)
T PRK13382 146 YDEEFS 151 (537)
T ss_pred EchhhH
Confidence 765443
No 258
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=25.22 E-value=3.2e+02 Score=26.97 Aligned_cols=64 Identities=20% Similarity=0.219 Sum_probs=41.6
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCC-----CCCHHHHHHHHHh---cCCeEEE
Q 041055 89 RSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANS-----INTESEIVKQVRD---SGAKLII 156 (526)
Q Consensus 89 ~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~ii 156 (526)
..+...+.. +++++||.|.+-.+. +....-++...|+.++.++. ....+.+...+++ -+.++++
T Consensus 55 ~al~~~l~a-l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 55 SALHIACLA-LGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHHHHH-cCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 344445555 678999997776543 45555667788987766543 2467888888864 3556665
No 259
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=25.20 E-value=67 Score=21.79 Aligned_cols=19 Identities=26% Similarity=0.557 Sum_probs=14.1
Q ss_pred ccceEEEcCCCcEEEEccc
Q 041055 440 TGDLCYFDGEGFLYIVDRI 458 (526)
Q Consensus 440 TGD~~~~~~~G~l~~~GR~ 458 (526)
-|.+.+.++||.+.+.|+.
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4567788888888888864
No 260
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=25.14 E-value=1.5e+02 Score=22.69 Aligned_cols=51 Identities=10% Similarity=0.023 Sum_probs=34.4
Q ss_pred eeCHHHHHHH----HHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCC
Q 041055 78 RVTYAQLHRS----IRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGA 129 (526)
Q Consensus 78 ~~Ty~el~~~----~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 129 (526)
.+.+.++.+. ...+...+.. +++.+++.|.+++.++.....+...+..+|.
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 91 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGF-PKPSKDKELIFYCKAGVRSKAAAELARSLGY 91 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcc-cCCCCCCeEEEECCCcHHHHHHHHHHHHcCC
Confidence 3455555432 2345555654 6777888999999998777777777777775
No 261
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=25.03 E-value=2.5e+02 Score=27.78 Aligned_cols=63 Identities=27% Similarity=0.253 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCC-----CCHHHHHHHHHhcCCeEEE
Q 041055 89 RSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSI-----NTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 89 ~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 156 (526)
..+...|.. +++++||.|.+-. +.|.....++...|+.++.++.. ...+.+...+.. +.++|+
T Consensus 59 ~al~lal~a-l~~~~Gd~Viv~~---~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMA-LGIGPGDEVITPS---LTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHH-cCCCCCCEEEECC---CcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 344445555 7789999877644 34555566777889887766432 356777777653 456665
No 262
>PLN03013 cysteine synthase
Probab=25.01 E-value=3.6e+02 Score=27.30 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=49.0
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcch
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASE 160 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 160 (526)
.| +++|....+....+-.-+...++|...|.-+..+-|.....+....++..++++++++..
T Consensus 168 ~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 168 KGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred cCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 45 578866566667777777888889999988777777777788889999999999998753
No 263
>PLN00011 cysteine synthase
Probab=24.71 E-value=4.5e+02 Score=25.40 Aligned_cols=58 Identities=12% Similarity=0.016 Sum_probs=45.0
Q ss_pred CCCC-CEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 101 VRKG-DVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 101 l~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
+.+| +.|. ....+-.-..+.++|..+|.-+..+-|...+.....+++..++.+++++.
T Consensus 65 ~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 65 ITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred CCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 6677 5554 46667777788889999998877776666667888899999999999875
No 264
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.67 E-value=4.9e+02 Score=26.65 Aligned_cols=84 Identities=5% Similarity=-0.025 Sum_probs=58.2
Q ss_pred hhhHHHHHHHHHHhhhhc-ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEeec
Q 041055 228 LTHANFISIMQLLRWTVD-VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIPL 305 (526)
Q Consensus 228 ~sh~~l~~~~~~~~~~~~-~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 305 (526)
+|...+...+......+. .+..+++++....+...-+ ...+++++..|+..+..+ .+....+...+++.+++.++.
T Consensus 12 ~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 12 VTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 566666655555443332 2367889888887754322 255778888999888775 567888999999999999888
Q ss_pred ccHHHHHH
Q 041055 306 VPPVILGL 313 (526)
Q Consensus 306 ~P~~~~~l 313 (526)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 77655444
No 265
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=24.66 E-value=4e+02 Score=31.52 Aligned_cols=85 Identities=15% Similarity=0.067 Sum_probs=62.6
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchH-HHHHHHHHcCCEEccCCC--CCCHHHHHHHHHhcCCe
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYP-SICLAIFSLGAILSPANS--INTESEIVKQVRDSGAK 153 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~--~~~~~~l~~~l~~~~~~ 153 (526)
-.+|.+.+....... .+..+++++|++....+-+.+.- .-+++.+..|+..+..++ ...++.+...+++.++.
T Consensus 616 V~~~h~~l~~~~~~~----~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt 691 (1296)
T PRK10252 616 VMVGQTAIVNRLLWM----QNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVT 691 (1296)
T ss_pred EEeccHHHHHHHHHH----HHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCe
Confidence 357887776554433 33378899999999888776553 346778889998887665 34678899999999999
Q ss_pred EEEEcchhHHHh
Q 041055 154 LIISASEELQKL 165 (526)
Q Consensus 154 ~ii~~~~~~~~~ 165 (526)
++...+..+..+
T Consensus 692 ~~~~~Ps~l~~l 703 (1296)
T PRK10252 692 TTHFVPSMLAAF 703 (1296)
T ss_pred EEEeCHHHHHHH
Confidence 998877765543
No 266
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=24.36 E-value=3.7e+02 Score=28.05 Aligned_cols=82 Identities=12% Similarity=0.147 Sum_probs=59.7
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|+..+...+..+...+ ..+..+++++...++...-+ ...+++++..|+..+... ....+.+...+++.+++.++
T Consensus 48 ~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 48 AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY--PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 578888887766655543 23467889888887754322 245678888999988774 56788999999999999988
Q ss_pred cccHHH
Q 041055 305 LVPPVI 310 (526)
Q Consensus 305 ~~P~~~ 310 (526)
......
T Consensus 126 ~~~~~~ 131 (557)
T PRK07059 126 VLENFA 131 (557)
T ss_pred EchhhH
Confidence 766543
No 267
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=24.12 E-value=2.8e+02 Score=28.16 Aligned_cols=56 Identities=21% Similarity=0.214 Sum_probs=37.0
Q ss_pred cCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCC-----CCHHHHHHHHHhcCCeEEEEc
Q 041055 99 LGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSI-----NTESEIVKQVRDSGAKLIISA 158 (526)
Q Consensus 99 ~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 158 (526)
.++++||.|.+-. +.|.....++...|+.+++++.. ...+.+...+.. +.++|++.
T Consensus 106 ~~~~pGd~VIv~~---~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVA---AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 3789999887654 44566667777889887766432 356777776643 55666653
No 268
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.90 E-value=2.9e+02 Score=20.15 Aligned_cols=67 Identities=15% Similarity=0.279 Sum_probs=49.2
Q ss_pred ceeCHHHHHHHHHHHHH---HHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCe
Q 041055 77 ERVTYAQLHRSIRSLAS---GLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAK 153 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~---~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 153 (526)
...||+||.+.-+.+++ +|.+ ..++..|-++|+-=++... .-++.++...+.+++...+++.+++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k-~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~ 75 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAK-VDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAE 75 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcc-cccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCch
Confidence 35799998888776654 3433 5678889999987665432 2346677888999999999999887
Q ss_pred EE
Q 041055 154 LI 155 (526)
Q Consensus 154 ~i 155 (526)
+=
T Consensus 76 in 77 (88)
T COG4009 76 IN 77 (88)
T ss_pred hc
Confidence 64
No 269
>PRK07867 acyl-CoA synthetase; Validated
Probab=23.43 E-value=4.1e+02 Score=27.66 Aligned_cols=83 Identities=6% Similarity=-0.061 Sum_probs=58.8
Q ss_pred HhhhHHHHHHHHHHhhhhcc--cCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEe
Q 041055 227 ILTHANFISIMQLLRWTVDV--THAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~~--~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 303 (526)
.+|...+...+..+...+.- +..+++++...++... .....+++++..|+.++..+ ....+.+...+++.++..+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 46777777766665555432 2456777777776432 33356778888999998774 5688899999999999998
Q ss_pred ecccHHHH
Q 041055 304 PLVPPVIL 311 (526)
Q Consensus 304 ~~~P~~~~ 311 (526)
+.......
T Consensus 106 i~~~~~~~ 113 (529)
T PRK07867 106 LTESAHAE 113 (529)
T ss_pred EECHhHHH
Confidence 88765554
No 270
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.39 E-value=4.3e+02 Score=27.78 Aligned_cols=85 Identities=15% Similarity=0.096 Sum_probs=58.9
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCch-HHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLY-PSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLII 156 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 156 (526)
.+|...+...+..+. .. +.+++.+++++...+|-.-.+ ....++.+..|+..+...+...++.+...+++.++.+++
T Consensus 200 ~~s~~~l~~~~~~~~-~~-~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 200 VYSHRSLYLQSLSLR-TT-DSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEcHHHHHHHHHhh-hh-hhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 577777755443322 12 226788999998887754332 334577788888877666667889999999999999998
Q ss_pred EcchhHHH
Q 041055 157 SASEELQK 164 (526)
Q Consensus 157 ~~~~~~~~ 164 (526)
..+..+..
T Consensus 278 ~~P~~~~~ 285 (576)
T PRK05620 278 GVPTLWIQ 285 (576)
T ss_pred ecCHHHHH
Confidence 77665543
No 271
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=23.38 E-value=4.4e+02 Score=28.77 Aligned_cols=82 Identities=13% Similarity=0.025 Sum_probs=56.5
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCC--CCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPN--SLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKL 154 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 154 (526)
-.+|.+.+...+..+.. ..++.++|++...+|- ...+...+++.+..|+..+..+.......+...+++.++..
T Consensus 383 v~~sh~~l~~~~~~~~~----~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~ 458 (718)
T PRK08043 383 VVHSHKSLLANVEQIKT----IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTV 458 (718)
T ss_pred EEEcHHHHHHHHHHHHH----hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeE
Confidence 36898888766654432 2678999999888775 23445567888889998876654344556667788888887
Q ss_pred EEEcchhH
Q 041055 155 IISASEEL 162 (526)
Q Consensus 155 ii~~~~~~ 162 (526)
+...+..+
T Consensus 459 ~~~~p~~~ 466 (718)
T PRK08043 459 LFGTSTFL 466 (718)
T ss_pred EEchHHHH
Confidence 77655433
No 272
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=23.02 E-value=5.6e+02 Score=25.95 Aligned_cols=56 Identities=7% Similarity=0.096 Sum_probs=29.3
Q ss_pred CCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHH----HHHHHHHhcCCeEEEEcc
Q 041055 103 KGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTES----EIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 103 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~----~l~~~l~~~~~~~ii~~~ 159 (526)
.|.+|+|+...+.-+-++-+-. .+|..++.+....... .+...+.......++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L~-elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFVL-ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHHH-HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 4778888886443332222222 5787765444333322 333445555566666554
No 273
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.84 E-value=3.5e+02 Score=28.26 Aligned_cols=81 Identities=11% Similarity=0.197 Sum_probs=58.9
Q ss_pred HhhhHHHHHHHHHHhhhhc--ccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEe
Q 041055 227 ILTHANFISIMQLLRWTVD--VTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNI 303 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~~--~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~ 303 (526)
.+|...+...+..+...+. .+..+++++....+-. ..+...+++++..|+..+..+ ....+.+...+++.+++.+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNL--LQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 5678877777666665552 3567888888877643 233356678888999888774 5678899999999999998
Q ss_pred ecccHH
Q 041055 304 PLVPPV 309 (526)
Q Consensus 304 ~~~P~~ 309 (526)
...+..
T Consensus 126 i~~~~~ 131 (560)
T PRK08974 126 VIVSNF 131 (560)
T ss_pred EEeccc
Confidence 876644
No 274
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=22.81 E-value=1.4e+02 Score=26.28 Aligned_cols=32 Identities=25% Similarity=0.408 Sum_probs=27.0
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFV 109 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i 109 (526)
.-+||.++++.+..+|..+.+ -|.+|.-.|++
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~-s~~~PDvIiai 36 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRA-SGFKPDVIVAI 36 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHH-cCCCCCEEEEE
Confidence 468999999999999999987 78888655555
No 275
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=22.65 E-value=4.9e+02 Score=26.56 Aligned_cols=84 Identities=12% Similarity=0.099 Sum_probs=59.5
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCc-hHHHHHHHHHcCCEEccCCCC--CCHHHHHHHHHhcCCe
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLL-YPSICLAIFSLGAILSPANSI--NTESEIVKQVRDSGAK 153 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~ 153 (526)
-.+|.+.+...+..+ ....++..++++....+-... .+..+++++..|+..+..++. .....+...+...++.
T Consensus 159 v~~s~~~~~~~~~~~----~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~ 234 (502)
T TIGR01734 159 VQISHDNLVSFTNWM----LADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLN 234 (502)
T ss_pred EEEecHHHHHHHHHH----HHhCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCe
Confidence 367888886555433 233678888888877665432 355678899999998877654 4567888888899998
Q ss_pred EEEEcchhHHH
Q 041055 154 LIISASEELQK 164 (526)
Q Consensus 154 ~ii~~~~~~~~ 164 (526)
.+...+.....
T Consensus 235 ~~~~~p~~~~~ 245 (502)
T TIGR01734 235 VWVSTPSFVDM 245 (502)
T ss_pred EEEEChhHHHH
Confidence 88877765543
No 276
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=22.56 E-value=2.1e+02 Score=22.67 Aligned_cols=49 Identities=10% Similarity=0.069 Sum_probs=34.6
Q ss_pred ceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC
Q 041055 67 RVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL 115 (526)
Q Consensus 67 ~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~ 115 (526)
..|++.-......|=.+-.+.+.+++..|.+.+|+.+++....+..+..
T Consensus 57 p~a~v~i~~~g~~~~e~k~~l~~~i~~~l~~~lgi~~~rv~I~f~~~~~ 105 (116)
T PTZ00397 57 GCCFVRVTSIGGISRSNNSSIAAAITKILASHLKVKSERVYIEFKDCSA 105 (116)
T ss_pred ceEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEECCh
Confidence 4555542222345778888889999999999899998877666655543
No 277
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=22.19 E-value=5.2e+02 Score=26.24 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=24.9
Q ss_pred CCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCC-C---HHHHHHHHHh
Q 041055 103 KGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSIN-T---ESEIVKQVRD 149 (526)
Q Consensus 103 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~---~~~l~~~l~~ 149 (526)
.|.+|+|+......+-++-+-. .+|..++.+-... . .+++..+++.
T Consensus 302 ~gkrv~i~g~~~~~~~la~~L~-elGm~v~~~~~~~~~~~~~~~~~~~l~~ 351 (435)
T cd01974 302 HGKKFALYGDPDFLIGLTSFLL-ELGMEPVHVLTGNGGKRFEKEMQALLDA 351 (435)
T ss_pred CCCEEEEEcChHHHHHHHHHHH-HCCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 4789999886544333333333 7887774432211 1 3445555554
No 278
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=22.09 E-value=5.6e+02 Score=24.25 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=45.1
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
.| +.+|+.|.- ...+-.-..+.++|.+.|.-+..+-|...+......++..++++++++.
T Consensus 53 ~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 53 RGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred cCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 35 467776644 5666667777788889998877776766666777889999999998875
No 279
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=22.02 E-value=3e+02 Score=20.07 Aligned_cols=15 Identities=13% Similarity=0.242 Sum_probs=12.2
Q ss_pred cccCCCcEEEEEeCC
Q 041055 383 GALSPTFYAKVVDTE 397 (526)
Q Consensus 383 G~~~~~~~~~ivd~~ 397 (526)
|+|.+++++++++.+
T Consensus 8 ~~P~~~~~V~L~e~d 22 (80)
T PF01060_consen 8 GKPAKNVKVKLWEDD 22 (80)
T ss_pred CccCCCCEEEEEECC
Confidence 568899999999854
No 280
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=21.87 E-value=2.8e+02 Score=24.10 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=19.6
Q ss_pred eeCHHHHHHHHHHHHHHHHHhc
Q 041055 78 RVTYAQLHRSIRSLASGLYHAL 99 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~ 99 (526)
-+|.+|+.+++.++|..+.+.+
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~ 29 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERY 29 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999998744
No 281
>PLN02479 acetate-CoA ligase
Probab=21.66 E-value=5.6e+02 Score=26.85 Aligned_cols=83 Identities=8% Similarity=0.054 Sum_probs=60.3
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..++|++....+..- .+...+++++..|+..+..+ .+..+.+...+++.++..++
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii 122 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP--AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVM 122 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH--HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEE
Confidence 467777777666655444 234788999988887533 23355678888898887774 56888999999999999998
Q ss_pred cccHHHH
Q 041055 305 LVPPVIL 311 (526)
Q Consensus 305 ~~P~~~~ 311 (526)
..+..+.
T Consensus 123 ~~~~~~~ 129 (567)
T PLN02479 123 VDQEFFT 129 (567)
T ss_pred Echhhhh
Confidence 8766543
No 282
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=21.62 E-value=1.3e+02 Score=28.31 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=40.1
Q ss_pred eeCHHHHHHH-----HHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCE
Q 041055 78 RVTYAQLHRS-----IRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAI 130 (526)
Q Consensus 78 ~~Ty~el~~~-----~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 130 (526)
.+.|.++... ...+...|.+ .|+.+++.|.++|.++.....+++++..+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFG-RGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667776531 3556666665 89999999999999999998888888888863
No 283
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=21.60 E-value=2e+02 Score=27.71 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=52.3
Q ss_pred eeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEE
Q 041055 78 RVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIIS 157 (526)
Q Consensus 78 ~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 157 (526)
.=|+++- .....+..... .|..+++.|.... .+-.-..+.++|.+.|.-++.+-|..........++..+++++++
T Consensus 28 tGS~K~R-~a~~~l~~a~~--~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~ 103 (316)
T cd06448 28 SGSFKIR-GIGHLCQKSAK--QGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVH 103 (316)
T ss_pred cCChHHH-HHHHHHHHHHH--hhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEE
Confidence 4456542 22333333332 3434456655544 456667777889999988887777767778889999999999998
Q ss_pred cch
Q 041055 158 ASE 160 (526)
Q Consensus 158 ~~~ 160 (526)
...
T Consensus 104 ~~~ 106 (316)
T cd06448 104 GKV 106 (316)
T ss_pred CCc
Confidence 754
No 284
>PRK06178 acyl-CoA synthetase; Validated
Probab=21.49 E-value=5e+02 Score=27.18 Aligned_cols=86 Identities=9% Similarity=0.075 Sum_probs=61.7
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++...++...- +...+++++..|+..+... ......+...+++.++..++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii 135 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLL 135 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH--HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEE
Confidence 468888777666655443 2346788888887775442 2255677888898887664 56788999999999999999
Q ss_pred cccHHHHHHH
Q 041055 305 LVPPVILGLV 314 (526)
Q Consensus 305 ~~P~~~~~l~ 314 (526)
..+.....+.
T Consensus 136 ~~~~~~~~l~ 145 (567)
T PRK06178 136 ALDQLAPVVE 145 (567)
T ss_pred EccchHHHHH
Confidence 8887665543
No 285
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=21.49 E-value=3.3e+02 Score=25.08 Aligned_cols=96 Identities=16% Similarity=0.251 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCE-EccCCCCCCHH---HHHHHHHhcCCeEEE
Q 041055 81 YAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAI-LSPANSINTES---EIVKQVRDSGAKLII 156 (526)
Q Consensus 81 y~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~-~v~l~~~~~~~---~l~~~l~~~~~~~ii 156 (526)
++++.++.+.+...+.+.+.--++ +..+...+...|+.-.++.-..+.. ..+ .-..++. ++...+++.+.++||
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~l~~~ik~~~v~~i~ 204 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKLPG-RPVVVYHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAELIKLIKENKVKCIF 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSG-GEEEEEESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHHHHHHHHHTT-SEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcccC-CeEEEEChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHHHHHHhhhcCCcEEE
Confidence 334444444444444432221122 6777788899999888877766655 112 2223444 455666888999999
Q ss_pred EcchhHH----Hh-hcCCCCEEEEcCC
Q 041055 157 SASEELQ----KL-TKVNVPIIVTSRD 178 (526)
Q Consensus 157 ~~~~~~~----~~-~~~~~~~i~~~~~ 178 (526)
+++..-. .+ ...+.+++.++.-
T Consensus 205 ~e~~~~~~~~~~la~~~g~~vv~ld~l 231 (256)
T PF01297_consen 205 TEPQFSSKLAEALAKETGVKVVYLDPL 231 (256)
T ss_dssp EETTS-THHHHHHHHCCT-EEEESSTT
T ss_pred ecCCCChHHHHHHHHHcCCcEEEeCCC
Confidence 9865433 23 2456666665543
No 286
>PRK10595 SOS cell division inhibitor; Provisional
Probab=21.40 E-value=2.6e+02 Score=23.90 Aligned_cols=55 Identities=13% Similarity=-0.080 Sum_probs=37.1
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCCCchHHHHHHHHHcCCEEccC--CC-CCCHHHHHHH
Q 041055 91 LASGLYHALGVRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPA--NS-INTESEIVKQ 146 (526)
Q Consensus 91 lA~~L~~~~gl~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~-~~~~~~l~~~ 146 (526)
.+.+|.+ .|+..+..+.|...+..+.+-++-=|++.|.+-+.+ -| ....++++++
T Consensus 69 ~~~~L~~-~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRL 126 (164)
T PRK10595 69 SREWLQA-SGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARL 126 (164)
T ss_pred CHHHHHH-cCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHH
Confidence 3557766 898887777777777788888888888888543332 24 5555554433
No 287
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=21.27 E-value=5e+02 Score=27.00 Aligned_cols=84 Identities=13% Similarity=0.096 Sum_probs=60.3
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchH---HHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCe
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYP---SICLAIFSLGAILSPANSINTESEIVKQVRDSGAK 153 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~---~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 153 (526)
-.+|...+...+..... . +++.++|++...+|-.-.+- ..+++++..|+..+... ......+...+++.++.
T Consensus 200 V~~s~~~l~~~~~~~~~---~-~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t 274 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---I-CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-DPSATLCFPLIEKHQVN 274 (536)
T ss_pred EEEehHHHHHHHHHHHH---h-cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-CCCHHHHHHHHHHhCCc
Confidence 35788888776665432 2 67899999988877653332 24688888998877653 45677788889999999
Q ss_pred EEEEcchhHHHh
Q 041055 154 LIISASEELQKL 165 (526)
Q Consensus 154 ~ii~~~~~~~~~ 165 (526)
++...+..+..+
T Consensus 275 ~~~~~p~~~~~l 286 (536)
T PRK10946 275 VTALVPPAVSLW 286 (536)
T ss_pred EEEeChHHHHHH
Confidence 988877665544
No 288
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=21.22 E-value=6.3e+02 Score=27.27 Aligned_cols=86 Identities=12% Similarity=-0.014 Sum_probs=63.1
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|++.+...+..+...+ ..+..++|++...++-..-+ ....++++..|+..+.. +.+..+.+...+++.+++.++
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 478888887777766554 23578899988888754332 25567888889888876 467889999999999999998
Q ss_pred cccHHHHHHH
Q 041055 305 LVPPVILGLV 314 (526)
Q Consensus 305 ~~P~~~~~l~ 314 (526)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8766554443
No 289
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=20.96 E-value=4.3e+02 Score=27.50 Aligned_cols=85 Identities=9% Similarity=-0.147 Sum_probs=59.7
Q ss_pred HhhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEec-CCCHHHHHHHHHhcCccEee
Q 041055 227 ILTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVMQ-RFDLQAMIEAIKTYQVNNIP 304 (526)
Q Consensus 227 ~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 304 (526)
.+|...+...+..+...+ ..+..+++++...++...-+- ..+++++..|+..+..+ ....+.+...++..++..++
T Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL--EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH--HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 467888877666655444 234678898888776543322 45667788898888764 56789999999999999988
Q ss_pred cccHHHHHH
Q 041055 305 LVPPVILGL 313 (526)
Q Consensus 305 ~~P~~~~~l 313 (526)
........+
T Consensus 117 ~~~~~~~~~ 125 (542)
T PRK06018 117 TDLTFVPIL 125 (542)
T ss_pred EccccHHHH
Confidence 766544433
No 290
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=20.87 E-value=1.2e+02 Score=22.48 Aligned_cols=49 Identities=29% Similarity=0.347 Sum_probs=29.1
Q ss_pred ceEEEeCCCCceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCC
Q 041055 67 RVALIDSATHERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSL 115 (526)
Q Consensus 67 ~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~ 115 (526)
+..++.-..+..-|-.+=.+-.+.++..|.++.|+.+.|....+..|..
T Consensus 28 ~~v~I~It~~~gRs~e~K~~ly~~l~~~L~~~~gi~p~Dv~I~l~e~~~ 76 (82)
T PF14552_consen 28 DFVIIQITSGAGRSTEQKKALYRALAERLAEKLGIRPEDVMIVLVENPR 76 (82)
T ss_dssp T-EEEEEEECS---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEEE-G
T ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEECCc
Confidence 3444432223445677777778889999987799999999888877764
No 291
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=20.70 E-value=1e+03 Score=25.64 Aligned_cols=101 Identities=7% Similarity=-0.096 Sum_probs=67.2
Q ss_pred hhhHHHHHHHHHHhhhh-cccCCCCcEEEEeCChhHHHHHHHHHHhhcccCcEEEEe-cCCCHHHHHHHHHhcCccEeec
Q 041055 228 LTHANFISIMQLLRWTV-DVTHAQNDIFLCMIPMFHIYGLAFFATGLFCCGVTIVVM-QRFDLQAMIEAIKTYQVNNIPL 305 (526)
Q Consensus 228 ~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~ 305 (526)
+|.+.+...+..+...+ ..+..++|++...++...- .....++++..|+..+.. +...++.+...++..+++.++.
T Consensus 77 ~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~ 154 (660)
T PLN02430 77 KTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFV 154 (660)
T ss_pred EEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEE
Confidence 57888877776655544 2357889988877775332 224567788888888766 4678899999999999999998
Q ss_pred ccHHHHHHHhhccCCCCCCCceEEEEe
Q 041055 306 VPPVILGLVKYCKDSSYLTSLRRVGSG 332 (526)
Q Consensus 306 ~P~~~~~l~~~~~~~~~l~~lr~v~~g 332 (526)
....+..+++.. ....+.++.++.-
T Consensus 155 ~~~~~~~~~~~~--~~~~~~l~~ii~~ 179 (660)
T PLN02430 155 QDKKIKELLEPD--CKSAKRLKAIVSF 179 (660)
T ss_pred CHHHHHHHHhhh--cccCCCceEEEEE
Confidence 765544444321 1123456655543
No 292
>cd00307 RuBisCO_small_like Ribulose bisphosphate carboxylase/oxygenase (Rubisco), small subunit and related proteins. Rubisco is a bifunctional enzyme catalyzes the initial steps of two opposing metabolic pathways: photosynthetic carbon fixation and the competing process of photorespiration. Rubisco Form I, present in plants and green algae, is composed of eight large and eight small subunits. The nearly identical small subunits are encoded by a family of nuclear genes. After translation, the small subunits are translocated across the chloroplast membrane, where an N-terminal signal peptide is cleaved off. While the large subunits contain the catalytic activities, it has been shown that the small subunits are important for catalysis by enhancing the catalytic rate through inducing conformational changes in the large subunits. This superfamily also contains specific proteins from cyanobacteria. CcmM plays a role in a CO2 concentrating mechanism, which cyanobacteria need to to overcome t
Probab=20.48 E-value=3.4e+02 Score=20.26 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=27.4
Q ss_pred hHHHHHHHhcCCCcccEEEEeeeCCCCCceEEEEEEeCC
Q 041055 471 PAELEAVLLSHPNILDAAVIPLEDEEAGQIPMAYVVRAA 509 (526)
Q Consensus 471 ~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~a~vv~~~ 509 (526)
..|||+.+.+||+ .=+-++|... ....+.+.||+-+|
T Consensus 48 l~el~~c~~~~p~-~YVRlig~D~-~~q~~~~~fIv~RP 84 (84)
T cd00307 48 LAALEACLAEHPG-EYVRLIGIDP-KAKRRVLEIIIQRP 84 (84)
T ss_pred HHHHHHHHHHCCC-CeEEEEEEeC-CccEEEEEEEeeCc
Confidence 4689999999997 5556777654 36677888888664
No 293
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=20.44 E-value=4.4e+02 Score=24.48 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=49.4
Q ss_pred CCEEEEECCCCCchHHHHHHHHHcCCE---EccCCCCCCHHHHHHHHHhcCCeEEEEcch--------hHHHhhcCCCCE
Q 041055 104 GDVVFVLAPNSLLYPSICLAIFSLGAI---LSPANSINTESEIVKQVRDSGAKLIISASE--------ELQKLTKVNVPI 172 (526)
Q Consensus 104 gd~V~i~~~n~~~~~~~~lA~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~--------~~~~~~~~~~~~ 172 (526)
+.++.+-.-...+.+- .|..+|.. .+.+.+-++.+.=..++++.+++++++-.+ .+....+.++++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~v 226 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINV 226 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcE
Confidence 3444444333334333 67777764 566677778888889999999999999653 223334679999
Q ss_pred EEEcCCC
Q 041055 173 IVTSRDQ 179 (526)
Q Consensus 173 i~~~~~~ 179 (526)
+++..+.
T Consensus 227 ivI~RP~ 233 (256)
T TIGR00715 227 IRIARPQ 233 (256)
T ss_pred EEEeCCC
Confidence 9998764
No 294
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=20.20 E-value=5.7e+02 Score=26.42 Aligned_cols=84 Identities=13% Similarity=0.075 Sum_probs=59.0
Q ss_pred ceeCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCCchH--H-HHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCe
Q 041055 77 ERVTYAQLHRSIRSLASGLYHALGVRKGDVVFVLAPNSLLYP--S-ICLAIFSLGAILSPANSINTESEIVKQVRDSGAK 153 (526)
Q Consensus 77 ~~~Ty~el~~~~~~lA~~L~~~~gl~~gd~V~i~~~n~~~~~--~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 153 (526)
-.+|...+...+.... .. .++.++|++...+|-.-.+- . ..++++..|+..+... ...+..+...+++.++.
T Consensus 201 v~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t 275 (527)
T TIGR02275 201 IPRTHNDYYYSVRRSV---EI-CWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAP-DPSPTDCFPLIERHKVT 275 (527)
T ss_pred eeeehHHHHHHHHHHH---hh-cCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECC-CCCHHHHHHHHHHhCCe
Confidence 3578888766655433 23 67889999988877553332 2 3677888898876644 45677888899999999
Q ss_pred EEEEcchhHHHh
Q 041055 154 LIISASEELQKL 165 (526)
Q Consensus 154 ~ii~~~~~~~~~ 165 (526)
++...+..+..+
T Consensus 276 ~~~~~p~~~~~l 287 (527)
T TIGR02275 276 VTALVPPAVALW 287 (527)
T ss_pred EEEecHHHHHHH
Confidence 998887766543
No 295
>PRK10717 cysteine synthase A; Provisional
Probab=20.16 E-value=5.3e+02 Score=24.94 Aligned_cols=60 Identities=15% Similarity=0.152 Sum_probs=44.7
Q ss_pred cC-CCCCCEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcc
Q 041055 99 LG-VRKGDVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISAS 159 (526)
Q Consensus 99 ~g-l~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 159 (526)
.| +++|+.|.- ...+-.-..+.++|.++|.-+..+-|...+......++..++++++++.
T Consensus 58 ~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 58 RGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred cCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 45 466766544 6666667777788889998777766666667778899999999998875
No 296
>PRK06381 threonine synthase; Validated
Probab=20.01 E-value=2.7e+02 Score=26.80 Aligned_cols=55 Identities=15% Similarity=0.049 Sum_probs=41.3
Q ss_pred CEEEEECCCCCchHHHHHHHHHcCCEEccCCCCCCHHHHHHHHHhcCCeEEEEcch
Q 041055 105 DVVFVLAPNSLLYPSICLAIFSLGAILSPANSINTESEIVKQVRDSGAKLIISASE 160 (526)
Q Consensus 105 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 160 (526)
+.| +....+-.-..+.++|...|.-+..+-|...+......++..+++++++..+
T Consensus 64 ~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~ 118 (319)
T PRK06381 64 SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK 118 (319)
T ss_pred CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC
Confidence 344 4456676777778899999987777666555566677899999999999864
Done!