BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041061
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana
GN=At3g12360 PE=2 SV=1
Length = 590
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 111/248 (44%), Gaps = 35/248 (14%)
Query: 11 TILHVAVRRRRHDIFQFIVE-------------KMPLYVPKWAARIDENGYTILHHVADM 57
T LHVA R++R +I + ++ K L + + +E+ Y + +
Sbjct: 302 TALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEGLPLSEESSY-----IKEC 356
Query: 58 KHYEYGIRPGPVYQFQEELQWF--ECVKDIAPSHYTMHRDTRKNMTAGDLFNRTHEDQLK 115
+R + Q ++EL+ + D+ H + + R N ++ +L+
Sbjct: 357 LARSGALRANELNQPRDELRSTVTQIKNDV---HIQLEQTKRTNKNVHNI-----SKELR 408
Query: 116 KA-QDWIKETSESCSILSILIATFVFAAAYTVPGGNNDKGFPNFLDSPMFYLFTITDVAS 174
K ++ I + S +++++L AT FAA +TVPGG+N+ G + F +F I + +
Sbjct: 409 KLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALA 468
Query: 175 LSLSLSSAVMFLSILTSPRESSDFLDHLPRKLKIGFMLLFLSVLASMITFSASILLVARL 234
L SL+ V+ ++++ ++ R +++ L++L+ + + + F AS +V
Sbjct: 469 LFTSLAVVVVQITLVRGETKAE------KRVVEVINKLMWLASMCTSVAFLASSYIVVGR 522
Query: 235 GERWTVAL 242
W L
Sbjct: 523 KNEWAAEL 530
>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana
GN=At5g02620 PE=1 SV=1
Length = 524
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 39/208 (18%)
Query: 1 MLSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60
++++ + KG T LH+AVR+ R +I Q +++ Y ++++G T L +
Sbjct: 219 LINSADNKGNTPLHIAVRKNRAEIVQTVLK----YCEVSRVAVNKSGETALDIAEKTGLH 274
Query: 61 EY-------------GIRPG-PVYQFQEELQWFECVKDIAPSHYTM----HRDTRKNMTA 102
E I+P V + E V +I +T R R+
Sbjct: 275 EIVPLLQKIGMQNARSIKPAEKVEPSGSSRKLKETVSEIGHEVHTQLEQTGRTRREIQGI 334
Query: 103 GDLFNRTHEDQLKKAQDWIKETSESCSILSILIATFVFAAAYTVPGGNNDK--------- 153
N+ H + L A + S ++++ILIAT FAA + VPG D
Sbjct: 335 AKRVNKMHTEGLNNAIN-------STTLVAILIATVAFAAIFNVPGQYTDDPKDVPPGYS 387
Query: 154 -GFPNFLDSPMFYLFTITDVASLSLSLS 180
G P F +F + D +L +SL+
Sbjct: 388 LGEARAAPRPEFLIFVVFDSFALFISLA 415
>sp|Q5SBP4|AZIS_OCIBA Alpha-zingiberene synthase OS=Ocimum basilicum GN=ZIS PE=1 SV=1
Length = 541
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 76 LQWFECVKDIAPSHYTMHRDTRKNMTAGDLFNRTHEDQLKKAQDWIKETS--ESCSILSI 133
+Q++EC D P+ + + ++ T++++LK+ W +ET E S
Sbjct: 207 IQFYECGSDANPTLVELAK------LDFNMVQATYQEELKRLSRWYEETGLQEKLSFARH 260
Query: 134 LIATFVFAAAYTVPGGNNDKGFPNFLDSPMFYLFTITDVASLSLSLSSAVMFLSILTSPR 193
+A + +P G+ G + + Y+ + D+ + +L + I+ R
Sbjct: 261 RLAEAFLWSMGIIPEGHFGYGRMHLMKIGA-YITLLDDIYDVYGTLEELQVLTEII--ER 317
Query: 194 ESSDFLDHLPRKLKIGFMLLFLSV--LASMITFSASILLVARLGERW 238
+ LD LP ++I F+ +F S LA I I +++ L W
Sbjct: 318 WDINLLDQLPEYMQIFFLYMFNSTNELAYEILRDQGINVISNLKGLW 364
>sp|O27564|MTHK_METTH Calcium-gated potassium channel MthK OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=mthK PE=1 SV=1
Length = 336
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 201 HLPRKLKIGFMLLFLSVLASMITFSASILLVARLGERWTVALY 243
HLPR LK+ + L VLA +I +A + GE WTV+LY
Sbjct: 11 HLPRVLKVPATRILLLVLAVIIYGTAGFHFIE--GESWTVSLY 51
>sp|Q80UP3|DGKZ_MOUSE Diacylglycerol kinase zeta OS=Mus musculus GN=Dgkz PE=1 SV=2
Length = 929
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 6 NQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVA 55
+QK +T+LH AV ++ +++++ P P+ ++ENG T LH A
Sbjct: 821 DQKSRTLLHHAVSTGSKEVVRYLLDHAP---PEILDAVEENGETCLHQAA 867
>sp|O34830|YKOS_BACSU Uncharacterized membrane protein YkoS OS=Bacillus subtilis (strain
168) GN=ykoS PE=4 SV=1
Length = 564
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 165 YLFTITDVASLSLSLSSAVMFLSILTSPRESSDFLDHLPRKLKIGFMLLFLSVLASMITF 224
YLF V + LSL A F I P++ FL FL L ++F
Sbjct: 308 YLFLC--VLNYGLSLWYAFWFNKIWAVPKQKFAFLAEFNFA-----RFHFLRPLVIYVSF 360
Query: 225 SASILLVARLGERWTVALYAAAILPVILLA 254
+ ++ L+ R+G+ W +YAA +++LA
Sbjct: 361 ALALYLIWRMGKGWKWLVYAAVAAQLMVLA 390
>sp|Q09103|DGK2_DROME Eye-specific diacylglycerol kinase OS=Drosophila melanogaster GN=rdgA
PE=2 SV=2
Length = 1457
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61
L +VN+ GQT LH A + DI ++I+ + A + E G T LH A+ +
Sbjct: 1347 LQSVNKNGQTALHFACKYNHRDIVKYIIASATRRLINMADK--ELGQTALHIAAEQNRRD 1404
>sp|Q13574|DGKZ_HUMAN Diacylglycerol kinase zeta OS=Homo sapiens GN=DGKZ PE=1 SV=3
Length = 1117
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 6 NQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVA 55
+++ +T+LH AV D+ +++++ P P+ ++ENG T LH A
Sbjct: 1009 DEQSRTLLHHAVSTGSKDVVRYLLDHAP---PEILDAVEENGETCLHQAA 1055
>sp|O75762|TRPA1_HUMAN Transient receptor potential cation channel subfamily A member 1
OS=Homo sapiens GN=TRPA1 PE=2 SV=3
Length = 1119
Score = 31.2 bits (69), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 1 MLSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVA 55
+L+ + G T LH+A + + Q +++K L++ D NG+T LHH +
Sbjct: 474 LLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLS------DHNGWTALHHAS 522
>sp|Q6RI86|TRPA1_RAT Transient receptor potential cation channel subfamily A member 1
OS=Rattus norvegicus GN=Trpa1 PE=2 SV=1
Length = 1125
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 1 MLSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVA 55
+L+ + G T LH+A + + Q +++K L++ D NG+T LHH +
Sbjct: 475 LLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLS------DHNGWTALHHAS 523
>sp|Q8BLA8|TRPA1_MOUSE Transient receptor potential cation channel subfamily A member 1
OS=Mus musculus GN=Trpa1 PE=1 SV=1
Length = 1125
Score = 31.2 bits (69), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 1 MLSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVA 55
+L+ + G T LH+A + + Q +++K L++ D NG+T LHH +
Sbjct: 475 LLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLS------DHNGWTALHHAS 523
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,125,527
Number of Sequences: 539616
Number of extensions: 3946417
Number of successful extensions: 13402
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 13382
Number of HSP's gapped (non-prelim): 42
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)