Query 041061
Match_columns 283
No_of_seqs 247 out of 2271
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 03:25:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041061.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041061hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13962 PGG: Domain of unknow 99.9 1.4E-27 3.1E-32 185.6 11.0 108 118-231 1-113 (113)
2 PF13857 Ank_5: Ankyrin repeat 99.4 2E-13 4.3E-18 92.5 4.4 48 2-54 9-56 (56)
3 KOG4412 26S proteasome regulat 99.3 3.5E-13 7.6E-18 110.1 2.3 80 4-107 32-114 (226)
4 PF13637 Ank_4: Ankyrin repeat 99.3 2.5E-12 5.5E-17 86.2 4.5 48 9-61 1-48 (54)
5 KOG4412 26S proteasome regulat 99.3 2E-12 4.4E-17 105.6 4.0 100 2-106 65-179 (226)
6 PHA02741 hypothetical protein; 99.2 2.2E-11 4.7E-16 101.1 7.1 84 2-110 53-143 (169)
7 PHA02743 Viral ankyrin protein 99.1 5.5E-11 1.2E-15 98.4 5.3 81 3-108 51-137 (166)
8 PLN03192 Voltage-dependent pot 99.1 9E-11 2E-15 119.8 5.3 102 2-109 551-665 (823)
9 KOG0510 Ankyrin repeat protein 99.1 6.9E-11 1.5E-15 115.0 4.0 56 1-61 265-320 (929)
10 KOG0512 Fetal globin-inducing 99.1 1.5E-10 3.2E-15 94.2 4.6 114 2-121 90-222 (228)
11 PHA02736 Viral ankyrin protein 99.0 7E-11 1.5E-15 96.3 2.0 80 5-109 51-136 (154)
12 KOG0509 Ankyrin repeat and DHH 99.0 4.5E-10 9.7E-15 107.1 6.8 18 91-109 238-255 (600)
13 KOG0195 Integrin-linked kinase 99.0 9E-10 1.9E-14 96.2 5.9 102 3-110 28-144 (448)
14 PHA02874 ankyrin repeat protei 98.9 1.1E-09 2.3E-14 104.0 6.0 101 2-108 117-232 (434)
15 PHA02859 ankyrin repeat protei 98.9 1.4E-09 3.1E-14 93.3 5.7 102 2-109 79-202 (209)
16 PF12796 Ank_2: Ankyrin repeat 98.9 1.5E-09 3.2E-14 79.9 4.6 48 9-61 26-73 (89)
17 PHA02791 ankyrin-like protein; 98.9 2.1E-09 4.6E-14 96.4 6.3 96 8-109 60-170 (284)
18 PHA02946 ankyin-like protein; 98.9 1.7E-09 3.7E-14 103.1 6.0 53 2-59 65-117 (446)
19 KOG0510 Ankyrin repeat protein 98.9 1.2E-09 2.6E-14 106.5 4.5 99 2-104 299-415 (929)
20 PHA02874 ankyrin repeat protei 98.9 1.9E-09 4.1E-14 102.3 5.7 100 2-108 150-263 (434)
21 PHA02946 ankyin-like protein; 98.9 1.8E-09 3.8E-14 103.0 5.2 28 81-109 225-252 (446)
22 PHA02791 ankyrin-like protein; 98.9 1.9E-09 4.2E-14 96.7 4.9 97 3-107 24-136 (284)
23 PHA02878 ankyrin repeat protei 98.9 2.5E-09 5.4E-14 102.8 5.5 56 2-62 160-216 (477)
24 KOG4214 Myotrophin and similar 98.8 3E-09 6.6E-14 78.0 4.0 50 8-62 33-82 (117)
25 PHA02736 Viral ankyrin protein 98.8 4.5E-09 9.7E-14 85.6 5.3 56 2-61 84-140 (154)
26 PHA02878 ankyrin repeat protei 98.8 3.9E-09 8.5E-14 101.4 5.5 99 2-108 194-309 (477)
27 KOG4177 Ankyrin [Cell wall/mem 98.8 2.4E-09 5.2E-14 109.6 3.8 101 2-108 533-653 (1143)
28 KOG0508 Ankyrin repeat protein 98.8 1.7E-09 3.7E-14 100.0 2.1 56 2-62 143-198 (615)
29 PHA02884 ankyrin repeat protei 98.8 5.3E-09 1.2E-13 94.3 5.1 99 4-108 27-146 (300)
30 PHA02795 ankyrin-like protein; 98.8 7.5E-09 1.6E-13 97.3 5.8 53 2-59 214-266 (437)
31 PHA02989 ankyrin repeat protei 98.8 6.1E-09 1.3E-13 100.5 5.3 56 2-62 249-304 (494)
32 PHA02743 Viral ankyrin protein 98.8 1E-08 2.3E-13 84.8 5.3 55 2-60 86-141 (166)
33 KOG0515 p53-interacting protei 98.8 7.6E-09 1.6E-13 96.7 4.9 51 4-59 578-628 (752)
34 PHA02875 ankyrin repeat protei 98.7 9.8E-09 2.1E-13 96.6 5.5 48 7-59 100-147 (413)
35 PHA03095 ankyrin-like protein; 98.7 1.3E-08 2.8E-13 97.2 5.9 100 2-107 40-160 (471)
36 PHA02741 hypothetical protein; 98.7 1.6E-08 3.4E-13 83.9 5.3 55 2-60 90-145 (169)
37 PHA02798 ankyrin-like protein; 98.7 1.4E-08 3E-13 97.9 5.5 55 2-61 251-305 (489)
38 PHA02730 ankyrin-like protein; 98.7 1.3E-08 2.9E-13 100.1 5.4 50 4-58 36-88 (672)
39 PHA03100 ankyrin repeat protei 98.7 1.2E-08 2.6E-13 97.7 5.0 53 4-61 136-190 (480)
40 PHA03095 ankyrin-like protein; 98.7 1.5E-08 3.2E-13 96.8 5.2 54 3-61 216-271 (471)
41 PHA02859 ankyrin repeat protei 98.7 2.7E-08 5.8E-13 85.4 6.2 49 3-56 45-96 (209)
42 KOG0509 Ankyrin repeat and DHH 98.7 1.1E-08 2.3E-13 97.8 3.9 101 2-108 71-187 (600)
43 PHA02875 ankyrin repeat protei 98.7 1.9E-08 4.1E-13 94.7 5.5 54 3-61 29-82 (413)
44 PHA02917 ankyrin-like protein; 98.7 3.1E-08 6.7E-13 98.6 6.6 98 3-106 26-143 (661)
45 PTZ00322 6-phosphofructo-2-kin 98.7 4.6E-08 1E-12 97.7 7.6 55 2-61 108-162 (664)
46 PHA02716 CPXV016; CPX019; EVM0 98.6 3.3E-08 7.1E-13 98.9 4.7 53 3-60 491-548 (764)
47 PHA03100 ankyrin repeat protei 98.6 5.2E-08 1.1E-12 93.3 4.9 102 2-109 169-293 (480)
48 PHA02876 ankyrin repeat protei 98.6 5.5E-08 1.2E-12 97.5 5.2 101 2-108 334-451 (682)
49 PHA02716 CPXV016; CPX019; EVM0 98.6 9.4E-08 2E-12 95.7 6.1 52 3-59 170-224 (764)
50 PF00023 Ank: Ankyrin repeat H 98.5 1E-07 2.2E-12 57.0 3.9 33 8-45 1-33 (33)
51 cd00204 ANK ankyrin repeats; 98.5 1.2E-07 2.6E-12 72.5 5.3 53 4-61 2-54 (126)
52 PHA02798 ankyrin-like protein; 98.5 6E-08 1.3E-12 93.5 4.5 53 2-59 64-121 (489)
53 COG0666 Arp FOG: Ankyrin repea 98.5 1.5E-07 3.3E-12 79.3 6.3 85 3-109 100-190 (235)
54 KOG0514 Ankyrin repeat protein 98.5 7.2E-08 1.6E-12 86.8 4.2 78 7-109 338-417 (452)
55 PHA02876 ankyrin repeat protei 98.5 8.9E-08 1.9E-12 96.0 5.4 56 2-62 171-226 (682)
56 PLN03192 Voltage-dependent pot 98.5 1.1E-07 2.5E-12 97.2 5.6 59 2-60 584-668 (823)
57 PF13857 Ank_5: Ankyrin repeat 98.5 3.6E-08 7.9E-13 66.5 1.1 49 38-106 7-56 (56)
58 KOG0502 Integral membrane anky 98.5 1E-07 2.2E-12 80.6 3.8 89 2-110 153-270 (296)
59 PF13606 Ank_3: Ankyrin repeat 98.5 2E-07 4.4E-12 54.6 3.5 25 8-32 1-25 (30)
60 TIGR00870 trp transient-recept 98.4 1.4E-05 2.9E-10 81.2 17.7 48 7-59 173-220 (743)
61 KOG0505 Myosin phosphatase, re 98.4 3.6E-07 7.7E-12 85.9 5.4 81 3-108 192-273 (527)
62 PHA02795 ankyrin-like protein; 98.4 2E-07 4.3E-12 87.8 3.7 77 8-109 187-264 (437)
63 KOG0195 Integrin-linked kinase 98.4 2.2E-07 4.7E-12 81.5 3.6 53 2-59 60-112 (448)
64 PHA02884 ankyrin repeat protei 98.4 4.8E-07 1E-11 81.7 5.7 53 6-63 67-120 (300)
65 KOG4177 Ankyrin [Cell wall/mem 98.3 4.2E-07 9E-12 93.5 4.9 57 2-63 566-622 (1143)
66 KOG0514 Ankyrin repeat protein 98.3 1.4E-07 3E-12 85.0 1.2 102 2-108 261-382 (452)
67 KOG0505 Myosin phosphatase, re 98.3 3.9E-07 8.5E-12 85.6 4.2 53 3-60 67-119 (527)
68 PHA02989 ankyrin repeat protei 98.3 7.1E-07 1.5E-11 86.2 5.6 51 2-57 101-155 (494)
69 KOG3676 Ca2+-permeable cation 98.3 8.7E-07 1.9E-11 87.0 5.8 80 8-109 239-318 (782)
70 KOG0512 Fetal globin-inducing 98.3 4.6E-07 1E-11 74.1 3.1 53 3-60 124-176 (228)
71 PHA02792 ankyrin-like protein; 98.3 9.8E-07 2.1E-11 86.3 5.0 50 2-56 403-452 (631)
72 KOG0507 CASK-interacting adapt 98.2 3.5E-07 7.6E-12 89.1 1.7 101 2-108 42-157 (854)
73 PHA02792 ankyrin-like protein; 98.2 1.3E-06 2.9E-11 85.4 5.4 54 1-59 167-227 (631)
74 PF12796 Ank_2: Ankyrin repeat 98.2 1.6E-06 3.4E-11 63.6 4.4 68 13-109 1-69 (89)
75 TIGR00870 trp transient-recept 98.2 1.7E-06 3.8E-11 87.6 5.0 50 7-61 126-189 (743)
76 PHA02917 ankyrin-like protein; 98.1 3.2E-06 6.9E-11 84.4 5.7 54 2-60 445-499 (661)
77 KOG0522 Ankyrin repeat protein 98.1 3E-06 6.5E-11 79.7 5.1 55 2-61 48-102 (560)
78 PHA02730 ankyrin-like protein; 98.1 3.7E-06 7.9E-11 83.1 5.1 51 2-57 455-506 (672)
79 PF13637 Ank_4: Ankyrin repeat 97.9 8.4E-06 1.8E-10 54.2 3.3 28 2-29 27-54 (54)
80 KOG1710 MYND Zn-finger and ank 97.9 1.3E-05 2.8E-10 70.5 5.3 74 2-80 38-126 (396)
81 cd00204 ANK ankyrin repeats; 97.9 1.9E-05 4.1E-10 60.1 5.6 53 3-60 34-86 (126)
82 KOG0783 Uncharacterized conser 97.9 2.3E-06 5E-11 84.2 0.4 57 2-63 45-102 (1267)
83 KOG0782 Predicted diacylglycer 97.9 6E-06 1.3E-10 78.2 3.0 53 4-59 894-946 (1004)
84 PTZ00322 6-phosphofructo-2-kin 97.9 1.2E-05 2.6E-10 80.5 4.8 46 12-62 85-130 (664)
85 KOG0507 CASK-interacting adapt 97.8 6.5E-06 1.4E-10 80.4 1.3 77 2-83 75-165 (854)
86 COG0666 Arp FOG: Ankyrin repea 97.7 2.8E-05 6.1E-10 65.3 4.0 54 3-61 141-194 (235)
87 KOG0502 Integral membrane anky 97.7 1.1E-05 2.4E-10 68.5 1.5 54 2-60 219-272 (296)
88 KOG0508 Ankyrin repeat protein 97.7 2.7E-05 5.9E-10 72.6 4.0 56 2-63 176-231 (615)
89 KOG0818 GTPase-activating prot 97.6 9.9E-05 2.1E-09 69.2 6.2 50 7-61 165-214 (669)
90 KOG0506 Glutaminase (contains 97.6 1.9E-05 4.1E-10 73.5 1.1 56 2-61 532-587 (622)
91 KOG0705 GTPase-activating prot 97.4 0.00013 2.7E-09 69.7 3.8 52 6-62 658-709 (749)
92 KOG0818 GTPase-activating prot 97.4 0.00032 6.9E-09 65.9 6.0 88 5-116 123-218 (669)
93 KOG3676 Ca2+-permeable cation 97.1 0.00052 1.1E-08 68.0 4.4 57 2-61 266-322 (782)
94 KOG0521 Putative GTPase activa 97.1 0.00036 7.7E-09 70.6 3.1 49 7-60 654-702 (785)
95 PF13606 Ank_3: Ankyrin repeat 96.8 0.00061 1.3E-08 39.6 1.1 16 46-61 1-16 (30)
96 PF00023 Ank: Ankyrin repeat H 96.7 0.00066 1.4E-08 40.2 1.0 16 46-61 1-16 (33)
97 KOG2384 Major histocompatibili 96.5 0.0032 6.9E-08 52.5 4.2 57 2-62 5-61 (223)
98 KOG0515 p53-interacting protei 96.5 0.0018 4E-08 61.4 3.2 46 2-51 609-654 (752)
99 smart00248 ANK ankyrin repeats 96.4 0.0047 1E-07 33.5 3.3 25 8-32 1-25 (30)
100 KOG0522 Ankyrin repeat protein 96.3 0.0023 5E-08 60.7 2.5 47 12-61 23-69 (560)
101 KOG1710 MYND Zn-finger and ank 95.9 0.0087 1.9E-07 53.1 3.8 55 4-63 74-128 (396)
102 KOG4214 Myotrophin and similar 95.7 0.016 3.5E-07 43.0 4.0 46 2-52 60-105 (117)
103 KOG0520 Uncharacterized conser 95.3 0.017 3.7E-07 59.0 4.1 58 2-59 634-692 (975)
104 KOG0506 Glutaminase (contains 95.1 0.016 3.4E-07 54.6 2.8 54 4-62 501-554 (622)
105 KOG3609 Receptor-activated Ca2 95.0 0.36 7.9E-06 48.7 12.2 62 2-63 55-147 (822)
106 KOG0783 Uncharacterized conser 94.9 0.03 6.4E-07 56.2 4.1 46 7-57 84-129 (1267)
107 KOG0782 Predicted diacylglycer 94.9 0.022 4.7E-07 54.8 3.1 54 2-60 927-980 (1004)
108 KOG4369 RTK signaling protein 94.8 0.01 2.2E-07 61.2 0.7 47 9-60 757-803 (2131)
109 KOG0520 Uncharacterized conser 94.8 0.0049 1.1E-07 62.8 -1.5 24 38-61 632-655 (975)
110 KOG0521 Putative GTPase activa 93.9 0.032 6.9E-07 56.8 2.0 53 2-59 682-734 (785)
111 KOG2505 Ankyrin repeat protein 93.5 0.061 1.3E-06 51.0 3.1 45 6-55 427-471 (591)
112 KOG0705 GTPase-activating prot 93.1 0.13 2.8E-06 49.7 4.5 75 13-109 628-704 (749)
113 KOG0511 Ankyrin repeat protein 91.4 0.2 4.4E-06 46.2 3.5 46 13-63 40-85 (516)
114 KOG4369 RTK signaling protein 91.1 0.11 2.4E-06 54.0 1.6 58 2-64 1020-1077(2131)
115 KOG0511 Ankyrin repeat protein 90.4 0.38 8.2E-06 44.5 4.2 52 2-59 62-113 (516)
116 KOG4591 Uncharacterized conser 89.6 0.2 4.4E-06 42.3 1.7 51 5-56 218-269 (280)
117 KOG2384 Major histocompatibili 86.3 0.51 1.1E-05 39.7 2.2 25 38-62 3-27 (223)
118 COG4298 Uncharacterized protei 69.4 13 0.00029 26.8 4.8 50 165-233 14-63 (95)
119 KOG2505 Ankyrin repeat protein 66.0 7.5 0.00016 37.4 3.8 40 22-61 404-444 (591)
120 PF12304 BCLP: Beta-casein lik 43.8 1.3E+02 0.0029 25.2 7.2 30 164-193 37-67 (188)
121 PF06570 DUF1129: Protein of u 43.2 2E+02 0.0044 24.2 14.6 10 98-107 44-53 (206)
122 KOG2887 Membrane protein invol 42.2 2E+02 0.0044 23.9 10.3 29 241-269 139-167 (175)
123 PF11286 DUF3087: Protein of u 40.9 2.1E+02 0.0045 23.6 9.1 58 212-269 21-84 (165)
124 PRK07668 hypothetical protein; 38.8 2.8E+02 0.006 24.6 10.0 46 98-143 44-91 (254)
125 KOG3609 Receptor-activated Ca2 38.5 25 0.00053 36.1 2.6 55 7-62 23-77 (822)
126 PF04123 DUF373: Domain of unk 33.4 4E+02 0.0086 24.7 10.6 66 167-232 176-248 (344)
127 COG1914 MntH Mn2+ and Fe2+ tra 32.9 4.4E+02 0.0096 25.1 10.6 26 154-183 278-303 (416)
128 KOG4112 Signal peptidase subun 30.1 1E+02 0.0022 22.9 4.0 46 211-263 31-76 (101)
129 PF05915 DUF872: Eukaryotic pr 28.6 2.6E+02 0.0056 21.5 6.3 51 205-255 43-95 (115)
130 KOG0828 Predicted E3 ubiquitin 26.6 5.8E+02 0.013 25.0 9.3 55 211-265 330-385 (636)
131 PF10966 DUF2768: Protein of u 26.1 2.1E+02 0.0046 19.2 5.0 21 213-233 2-22 (58)
132 PF11023 DUF2614: Protein of u 25.8 3.1E+02 0.0067 21.1 6.2 17 207-223 13-29 (114)
133 PF02990 EMP70: Endomembrane p 23.8 5.5E+02 0.012 25.1 9.2 45 212-256 303-348 (521)
134 PRK10714 undecaprenyl phosphat 23.3 5.1E+02 0.011 23.4 8.4 19 213-231 235-253 (325)
135 KOG3359 Dolichyl-phosphate-man 23.1 8.4E+02 0.018 25.1 12.2 26 164-189 167-192 (723)
136 PF04148 Erv26: Transmembrane 22.6 3.3E+02 0.0071 23.4 6.4 60 210-269 9-76 (211)
137 PLN03211 ABC transporter G-25; 21.6 8.2E+02 0.018 24.8 10.1 26 163-188 478-504 (659)
138 PF10661 EssA: WXG100 protein 21.2 1.2E+02 0.0026 24.4 3.3 23 212-234 120-142 (145)
139 PF15312 JSRP: Junctional sarc 20.9 63 0.0014 22.2 1.4 23 120-142 6-30 (65)
140 PF10011 DUF2254: Predicted me 20.7 6.9E+02 0.015 23.2 9.2 19 129-147 13-31 (371)
141 PF03669 UPF0139: Uncharacteri 20.3 3.8E+02 0.0083 20.1 6.2 15 169-183 34-48 (103)
142 PRK12585 putative monovalent c 20.2 4.9E+02 0.011 22.1 6.8 10 193-202 28-37 (197)
143 PF11929 DUF3447: Domain of un 20.0 1.1E+02 0.0025 21.2 2.7 38 10-59 7-44 (76)
No 1
>PF13962 PGG: Domain of unknown function
Probab=99.95 E-value=1.4e-27 Score=185.55 Aligned_cols=108 Identities=34% Similarity=0.606 Sum_probs=95.1
Q ss_pred HhHHhhhccchhHHHHHHHHHHhhhhccCCCCCCCC----CccccCCCc-chhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 041061 118 QDWIKETSESCSILSILIATFVFAAAYTVPGGNNDK----GFPNFLDSP-MFYLFTITDVASLSLSLSSAVMFLSILTSP 192 (283)
Q Consensus 118 ~~~lk~t~~~~~vva~LIATvtFaA~~t~PGG~~~~----G~~~l~~~~-~f~~F~~~nt~a~~~S~~~~~~~~~~~~~~ 192 (283)
+||+++++|++++||+|||||||||++|||||++|| |+|++.+++ .|++|+++|++||++|+++++++++.+
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~--- 77 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL--- 77 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 478999999999999999999999999999999774 999999888 999999999999999999998876322
Q ss_pred CccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041061 193 RESSDFLDHLPRKLKIGFMLLFLSVLASMITFSASILLV 231 (283)
Q Consensus 193 ~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~af~~~~~~~ 231 (283)
+++.+..++.+.++..++++++.+|++||++|+++|
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 334444556788899999999999999999999875
No 2
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.41 E-value=2e-13 Score=92.51 Aligned_cols=48 Identities=23% Similarity=0.350 Sum_probs=31.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHH
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHV 54 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlA 54 (283)
++.+|..|+||||+||.+|+.+++++|++. +..++.+|++|+||||+|
T Consensus 9 ~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~-----g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 9 VNAQDKYGNTPLHWAARYGHSEVVRLLLQN-----GADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TT---TTS--HHHHHHHHT-HHHHHHHHHC-----T--TT---TTS--HHHH-
T ss_pred CcCcCCCCCcHHHHHHHcCcHHHHHHHHHC-----cCCCCCCcCCCCCHHHhC
Confidence 567899999999999999999999999954 467999999999999997
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.34 E-value=3.5e-13 Score=110.08 Aligned_cols=80 Identities=21% Similarity=0.201 Sum_probs=59.4
Q ss_pred cccC-CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhh
Q 041061 4 TVNQ-KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECV 82 (283)
Q Consensus 4 ~~D~-~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v 82 (283)
.+|+ +||||||+||..|+.+|+++|++. .+..+|.+|..|+||||.|+..|+.+ .|
T Consensus 32 ~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq----~nv~~ddkDdaGWtPlhia~s~g~~e-------------------vV 88 (226)
T KOG4412|consen 32 ARDDQDGRTPLHWACSFGHVEIVYFLLSQ----PNVKPDDKDDAGWTPLHIAASNGNDE-------------------VV 88 (226)
T ss_pred ccccccCCceeeeeeecCchhHHHHHHhc----CCCCCCCccccCCchhhhhhhcCcHH-------------------HH
Confidence 3444 999999999999999999999874 24568999999999999999988733 33
Q ss_pred hccccc--ccccccccccCCccccccc
Q 041061 83 KDIAPS--HYTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 83 ~~~~~~--~~~~~~n~~~G~T~~dl~~ 107 (283)
+.++.+ ...+..|+ .|+|+++++.
T Consensus 89 k~Ll~r~~advna~tn-~G~T~LHyAa 114 (226)
T KOG4412|consen 89 KELLNRSGADVNATTN-GGQTCLHYAA 114 (226)
T ss_pred HHHhcCCCCCcceecC-CCcceehhhh
Confidence 433322 23445555 6777766654
No 4
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.30 E-value=2.5e-12 Score=86.25 Aligned_cols=48 Identities=31% Similarity=0.363 Sum_probs=38.1
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 9 GQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 9 G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
|+|+||+|++.|+.+++++|++++ ..+|.+|.+|+||||+|++.|+.+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~-----~din~~d~~g~t~lh~A~~~g~~~ 48 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG-----ADINAQDEDGRTPLHYAAKNGNID 48 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT-----SGTT-B-TTS--HHHHHHHTT-HH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHccCHH
Confidence 899999999999999999999873 459999999999999999999854
No 5
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.29 E-value=2e-12 Score=105.64 Aligned_cols=100 Identities=13% Similarity=0.102 Sum_probs=75.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccccc--------------CCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGI--------------RPG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~--------------~~g 67 (283)
+|++|+.||||||+|+..|+.++|+.|+.+. +..+|.+++.|.|+||+|+..|..+..- ...
T Consensus 65 ~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~----~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~q 140 (226)
T KOG4412|consen 65 PDDKDDAGWTPLHIAASNGNDEVVKELLNRS----GADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQ 140 (226)
T ss_pred CCCccccCCchhhhhhhcCcHHHHHHHhcCC----CCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccC
Confidence 5788999999999999999999999998763 4679999999999999999777654320 133
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLF 106 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~ 106 (283)
++++-+...+..+.++.++... ..+..++ .|.||+..+
T Consensus 141 tplHRAAavGklkvie~Li~~~a~~n~qDk-~G~TpL~~a 179 (226)
T KOG4412|consen 141 TPLHRAAAVGKLKVIEYLISQGAPLNTQDK-YGFTPLHHA 179 (226)
T ss_pred chhHHHHhccchhhHHHHHhcCCCCCcccc-cCccHHHHH
Confidence 5666666666666666555433 3455666 899998765
No 6
>PHA02741 hypothetical protein; Provisional
Probab=99.23 E-value=2.2e-11 Score=101.08 Aligned_cols=84 Identities=17% Similarity=0.194 Sum_probs=61.9
Q ss_pred cccccCCCChHHHHHHHhCC----HHHHHHHHHhCCCCcccccccccC-CCCcHHHHHHhcCCcccccCCCChhhhHHHh
Q 041061 2 LSTVNQKGQTILHVAVRRRR----HDIFQFIVEKMPLYVPKWAARIDE-NGYTILHHVADMKHYEYGIRPGPVYQFQEEL 76 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~----~~iv~~Ll~~~~~~~~~~vn~~D~-~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l 76 (283)
++.+|..|+||||+|+.+|+ .+++++|++. +..+|.+|. +|+||||+|+..++.+
T Consensus 53 in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~-----gadin~~~~~~g~TpLh~A~~~~~~~--------------- 112 (169)
T PHA02741 53 LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL-----GADINAQEMLEGDTALHLAAHRRDHD--------------- 112 (169)
T ss_pred hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc-----CCCCCCCCcCCCCCHHHHHHHcCCHH---------------
Confidence 46678899999999999998 5788888875 355888885 8999999999888732
Q ss_pred hhhhhhhcccc--cccccccccccCCcccccccchh
Q 041061 77 QWFECVKDIAP--SHYTMHRDTRKNMTAGDLFNRTH 110 (283)
Q Consensus 77 ~~~~~v~~~~~--~~~~~~~n~~~G~T~~dl~~~~~ 110 (283)
.++.++. ....+.+|. +|+||.+++....
T Consensus 113 ----iv~~Ll~~~g~~~~~~n~-~g~tpL~~A~~~~ 143 (169)
T PHA02741 113 ----LAEWLCCQPGIDLHFCNA-DNKSPFELAIDNE 143 (169)
T ss_pred ----HHHHHHhCCCCCCCcCCC-CCCCHHHHHHHCC
Confidence 2333331 234456677 9999998876543
No 7
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.13 E-value=5.5e-11 Score=98.44 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=52.5
Q ss_pred ccccCCCChHHHHHHHhCCHHH---HHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccccCCCChhhhHHHhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDI---FQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYGIRPGPVYQFQEELQW 78 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~i---v~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~ 78 (283)
+.+|++|+||||+|+.+|+.++ +++|++. +..+|.+| .+|+||||+|+..++.+
T Consensus 51 ~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-----Gadin~~d~~~g~TpLh~A~~~g~~~----------------- 108 (166)
T PHA02743 51 HRYDHHGRQCTHMVAWYDRANAVMKIELLVNM-----GADINARELGTGNTLLHIAASTKNYE----------------- 108 (166)
T ss_pred hccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-----CCCCCCCCCCCCCcHHHHHHHhCCHH-----------------
Confidence 4567778888888888777554 6677664 34577777 47888888888766532
Q ss_pred hhhhhcccc--cccccccccccCCcccccccc
Q 041061 79 FECVKDIAP--SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 79 ~~~v~~~~~--~~~~~~~n~~~G~T~~dl~~~ 108 (283)
.++.++. ....+.+|. +|.||..++..
T Consensus 109 --iv~~Ll~~~gad~~~~d~-~g~tpL~~A~~ 137 (166)
T PHA02743 109 --LAEWLCRQLGVNLGAINY-QHETAYHIAYK 137 (166)
T ss_pred --HHHHHHhccCCCccCcCC-CCCCHHHHHHH
Confidence 2232321 223456666 89999887654
No 8
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.08 E-value=9e-11 Score=119.77 Aligned_cols=102 Identities=19% Similarity=0.142 Sum_probs=77.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC------------CCCh
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR------------PGPV 69 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~------------~g~a 69 (283)
+|..|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.+.. .+++
T Consensus 551 ~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-----adin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~ 625 (823)
T PLN03192 551 PDIGDSKGRTPLHIAASKGYEDCVLVLLKHA-----CNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDL 625 (823)
T ss_pred CCCCCCCCCCHHHHHHHcChHHHHHHHHhcC-----CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchH
Confidence 4778999999999999999999999999863 5689999999999999999998765321 2345
Q ss_pred hhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 70 YQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 70 l~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
+..+...+..+.++.++..+ ..+.+|+ +|.||.+++.+.
T Consensus 626 L~~Aa~~g~~~~v~~Ll~~Gadin~~d~-~G~TpLh~A~~~ 665 (823)
T PLN03192 626 LCTAAKRNDLTAMKELLKQGLNVDSEDH-QGATALQVAMAE 665 (823)
T ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHC
Confidence 65655555555566555432 3456677 899998886543
No 9
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.08 E-value=6.9e-11 Score=115.02 Aligned_cols=56 Identities=16% Similarity=0.153 Sum_probs=37.6
Q ss_pred CcccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 1 MLSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 1 ~ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
|++++|++|.||||+|+++|+.+.++.|+.. +..+|.+++|+.||||.||..|...
T Consensus 265 lv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~-----Ga~I~~kn~d~~spLH~AA~yg~~n 320 (929)
T KOG0510|consen 265 LVNDEDNDGCTPLHYAARQGGPESVDNLLGF-----GASINSKNKDEESPLHFAAIYGRIN 320 (929)
T ss_pred HhhcccccCCchHHHHHHcCChhHHHHHHHc-----CCcccccCCCCCCchHHHHHcccHH
Confidence 4667777888888888888877777777764 3445666666666666666655433
No 10
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.06 E-value=1.5e-10 Score=94.21 Aligned_cols=114 Identities=18% Similarity=0.178 Sum_probs=75.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC------------CC--
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR------------PG-- 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~------------~g-- 67 (283)
++.+|++|.||||-|+.+||.+|++.|+.. ++..+.+.++|+||||-|++-.+.++... .|
T Consensus 90 vNtrD~D~YTpLHRAaYn~h~div~~ll~~-----gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~l 164 (228)
T KOG0512|consen 90 VNTRDEDEYTPLHRAAYNGHLDIVHELLLS-----GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLL 164 (228)
T ss_pred ccccccccccHHHHHHhcCchHHHHHHHHc-----cCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccc
Confidence 678999999999999999999999999876 35688999999999999998877765421 11
Q ss_pred ChhhhHHHhhhhh-hhhccccccc--ccccccccCCcccccccch--hhhhHHhhHhHH
Q 041061 68 PVYQFQEELQWFE-CVKDIAPSHY--TMHRDTRKNMTAGDLFNRT--HEDQLKKAQDWI 121 (283)
Q Consensus 68 ~al~l~~~l~~~~-~v~~~~~~~~--~~~~n~~~G~T~~dl~~~~--~~~~~~~~~~~l 121 (283)
+++++........ .+.-++...+ ...+|+ .+.||.+++++. ..++.+..++.+
T Consensus 165 tpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn-~eeta~~iARRT~~s~~lfe~~e~~~ 222 (228)
T KOG0512|consen 165 TPLHLAAGNRNSRDTLELLLHDRYIHPGLKNN-LEETAFDIARRTSMSHYLFEIVEGCM 222 (228)
T ss_pred hhhHHhhcccchHHHHHHHhhccccChhhhcC-ccchHHHHHHHhhhhHHHHHHHHHHh
Confidence 4454443222111 1111222222 235666 789999888665 333444444333
No 11
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.04 E-value=7e-11 Score=96.29 Aligned_cols=80 Identities=15% Similarity=0.089 Sum_probs=48.1
Q ss_pred ccCCCChHHHHHHHhCCHH---HHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhh
Q 041061 5 VNQKGQTILHVAVRRRRHD---IFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFE 80 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~---iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~ 80 (283)
+|++|+||||+|+.+|+.+ ++++|++. +..+|.+| .+|+||||+|+..++. +
T Consensus 51 ~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-----gadin~~~~~~g~T~Lh~A~~~~~~-------------------~ 106 (154)
T PHA02736 51 YNRHGKQCVHIVSNPDKADPQEKLKLLMEW-----GADINGKERVFGNTPLHIAVYTQNY-------------------E 106 (154)
T ss_pred hcCCCCEEEEeecccCchhHHHHHHHHHHc-----CCCccccCCCCCCcHHHHHHHhCCH-------------------H
Confidence 4666666666666666653 45566554 34467776 3777777777766652 2
Q ss_pred hhhcccc--cccccccccccCCcccccccch
Q 041061 81 CVKDIAP--SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 81 ~v~~~~~--~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
.++.++. ....+.+|+ .|+||..++...
T Consensus 107 i~~~Ll~~~g~d~n~~~~-~g~tpL~~A~~~ 136 (154)
T PHA02736 107 LATWLCNQPGVNMEILNY-AFKTPYYVACER 136 (154)
T ss_pred HHHHHHhCCCCCCccccC-CCCCHHHHHHHc
Confidence 2333332 223456677 899998877643
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.02 E-value=4.5e-10 Score=107.08 Aligned_cols=18 Identities=22% Similarity=0.104 Sum_probs=13.4
Q ss_pred ccccccccCCcccccccch
Q 041061 91 TMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 91 ~~~~n~~~G~T~~dl~~~~ 109 (283)
.+..|. +|+||.+++++.
T Consensus 238 ~d~~~~-~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 238 LDKTNT-NGKTPFDLAQER 255 (600)
T ss_pred cccccc-CCCCHHHHHHHh
Confidence 445666 899999998665
No 13
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.96 E-value=9e-10 Score=96.25 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=72.2
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
|.-|+.|.+|||+|++.||..+++.|+.+ ++-+|..+.-.+||||+||..||.+.+.. ..+
T Consensus 28 n~gddhgfsplhwaakegh~aivemll~r-----garvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgnt 102 (448)
T KOG0195|consen 28 NVGDDHGFSPLHWAAKEGHVAIVEMLLSR-----GARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNT 102 (448)
T ss_pred ccccccCcchhhhhhhcccHHHHHHHHhc-----ccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCC
Confidence 45588999999999999999999999886 35588888888999999999998765421 224
Q ss_pred hhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccchh
Q 041061 69 VYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRTH 110 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~~ 110 (283)
+++-+--.++....+.++.. +.....|+ +|.||.|.++..-
T Consensus 103 plhyacfwgydqiaedli~~ga~v~icnk-~g~tpldkakp~l 144 (448)
T KOG0195|consen 103 PLHYACFWGYDQIAEDLISCGAAVNICNK-KGMTPLDKAKPML 144 (448)
T ss_pred chhhhhhhcHHHHHHHHHhccceeeeccc-CCCCchhhhchHH
Confidence 55444333333333333332 34567888 9999999876543
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.94 E-value=1.1e-09 Score=103.99 Aligned_cols=101 Identities=14% Similarity=0.122 Sum_probs=71.9
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 117 ~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g-----ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~ 191 (434)
T PHA02874 117 VNIKDAELKTFLHYAIKKGDLESIKMLFEYG-----ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGE 191 (434)
T ss_pred CCCCCCCCccHHHHHHHCCCHHHHHHHHhCC-----CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 3567889999999999999999999998863 4588999999999999998887654311 23
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
++++.+...+..+.++.++..+ ....++. +|.||...+..
T Consensus 192 tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~-~g~TpL~~A~~ 232 (434)
T PHA02874 192 SPLHNAAEYGDYACIKLLIDHGNHIMNKCK-NGFTPLHNAII 232 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCcCCCC-CCCCHHHHHHH
Confidence 6676666555555555544332 2334555 78888776543
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.92 E-value=1.4e-09 Score=93.31 Aligned_cols=102 Identities=10% Similarity=0.023 Sum_probs=64.4
Q ss_pred ccccc-CCCChHHHHHHHh---CCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhc--CCccccc---C-------
Q 041061 2 LSTVN-QKGQTILHVAVRR---RRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADM--KHYEYGI---R------- 65 (283)
Q Consensus 2 ie~~D-~~G~t~LH~Av~~---g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~--~~~~~~~---~------- 65 (283)
++.+| .+|+||||+|+.. ++.+++++|+++ +..+|.+|.+|.||||+|+.. ++.+.+. .
T Consensus 79 vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~-----gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~ 153 (209)
T PHA02859 79 VNFKTRDNNLSALHHYLSFNKNVEPEILKILIDS-----GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN 153 (209)
T ss_pred CCccCCCCCCCHHHHHHHhCccccHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence 45565 4899999998864 468999999986 356899999999999998754 3333221 0
Q ss_pred ----CCChhhhHHHh-hhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 66 ----PGPVYQFQEEL-QWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 66 ----~g~al~l~~~l-~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
..++++..... ...+.++-++.. ...+.+|+ .|+||.+++..+
T Consensus 154 ~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~-~g~tpl~la~~~ 202 (209)
T PHA02859 154 KDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNK-SGYNCYDLIKFR 202 (209)
T ss_pred ccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHhhh
Confidence 12445432111 122333333322 23456777 899998886543
No 16
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.91 E-value=1.5e-09 Score=79.91 Aligned_cols=48 Identities=31% Similarity=0.394 Sum_probs=42.7
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 9 GQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 9 G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENG-----ADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTT-----TCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhc-----ccccccCCCCCCHHHHHHHcCCHH
Confidence 899999999999999999999864 468999999999999999988743
No 17
>PHA02791 ankyrin-like protein; Provisional
Probab=98.90 E-value=2.1e-09 Score=96.43 Aligned_cols=96 Identities=14% Similarity=0.063 Sum_probs=63.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC-------------CC--Chhhh
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR-------------PG--PVYQF 72 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~-------------~g--~al~l 72 (283)
+|+||||+|+.+|+.+++++|++. +..+|.+|.+|+||||+|+..++.+.+.. .| +++..
T Consensus 60 d~~TpLh~Aa~~g~~eiV~lLL~~-----Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~ 134 (284)
T PHA02791 60 ENEFPLHQAATLEDTKIVKILLFS-----GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYH 134 (284)
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHH
Confidence 578999999999999999999875 34578889999999999998887654321 12 45555
Q ss_pred HHHhhhhhhhhcccccccccccccccCCcccccccch
Q 041061 73 QEELQWFECVKDIAPSHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 73 ~~~l~~~~~v~~~~~~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
+...+..+.++.++... ....+...|.||..++...
T Consensus 135 Aa~~g~~eivk~LL~~~-~~~~d~~~g~TpLh~Aa~~ 170 (284)
T PHA02791 135 AVMLNDVSIVSYFLSEI-PSTFDLAILLSCIHITIKN 170 (284)
T ss_pred HHHcCCHHHHHHHHhcC-CcccccccCccHHHHHHHc
Confidence 54444455555544321 1112211578888876544
No 18
>PHA02946 ankyin-like protein; Provisional
Probab=98.90 E-value=1.7e-09 Score=103.12 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=47.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
++.+|.+|+||||+|+++|+.+++++|+++ ++.+|.+|.+|+||||+|+..++
T Consensus 65 vn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~-----GAdin~~d~~g~TpLh~A~~~~~ 117 (446)
T PHA02946 65 PNETDDDGNYPLHIASKINNNRIVAMLLTH-----GADPNACDKQHKTPLYYLSGTDD 117 (446)
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHC-----cCCCCCCCCCCCCHHHHHHHcCC
Confidence 467899999999999999999999999986 35689999999999999987654
No 19
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.89 E-value=1.2e-09 Score=106.54 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=65.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC----------------
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---------------- 65 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---------------- 65 (283)
|+.+++++.||||.||.+|+.+.++.|++. . ..+++|+.|..|+||||+|++.||.+++..
T Consensus 299 I~~kn~d~~spLH~AA~yg~~ntv~rLL~~-~--~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~ 375 (929)
T KOG0510|consen 299 INSKNKDEESPLHFAAIYGRINTVERLLQE-S--DTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADS 375 (929)
T ss_pred ccccCCCCCCchHHHHHcccHHHHHHHHhC-c--CccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhccccccc
Confidence 467788888888888888888888888872 2 246788888888888888888888665321
Q ss_pred -CCChhhhHHHhhhhhhhhcccccc-cccccccccCCcccc
Q 041061 66 -PGPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGD 104 (283)
Q Consensus 66 -~g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~d 104 (283)
..++++.+...+....|..++..+ +...+|+ .|+++.+
T Consensus 376 dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~-~g~SA~~ 415 (929)
T KOG0510|consen 376 DGNTALHLAAKYGNTSAVQKLISHGADIGVKNK-KGKSAFD 415 (929)
T ss_pred CCchhhhHHHHhccHHHHHHHHHcCCceeeccc-ccccccc
Confidence 114555554444444454444332 3345666 7777766
No 20
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.89 E-value=1.9e-09 Score=102.29 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=71.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.+.. ..
T Consensus 150 ~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-----~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~ 224 (434)
T PHA02874 150 VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG-----AYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGF 224 (434)
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCC
Confidence 3567899999999999999999999999864 4578999999999999999988665321 22
Q ss_pred ChhhhHHHhhhhhhhhcccccccccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~~~~~~n~~~G~T~~dl~~~ 108 (283)
++++.+.... .+.++.++.....+.++. +|.||..++.+
T Consensus 225 TpL~~A~~~~-~~~i~~Ll~~~~in~~d~-~G~TpLh~A~~ 263 (434)
T PHA02874 225 TPLHNAIIHN-RSAIELLINNASINDQDI-DGSTPLHHAIN 263 (434)
T ss_pred CHHHHHHHCC-hHHHHHHHcCCCCCCcCC-CCCCHHHHHHh
Confidence 5555543221 223333333344556666 89999887654
No 21
>PHA02946 ankyin-like protein; Provisional
Probab=98.88 E-value=1.8e-09 Score=103.02 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=18.5
Q ss_pred hhhcccccccccccccccCCcccccccch
Q 041061 81 CVKDIAPSHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 81 ~v~~~~~~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
.++-+++....+.+|+ +|+||..++.+.
T Consensus 225 iv~lLl~gadin~~d~-~G~TpLh~A~~~ 252 (446)
T PHA02946 225 IINLLLPSTDVNKQNK-FGDSPLTLLIKT 252 (446)
T ss_pred HHHHHHcCCCCCCCCC-CCCCHHHHHHHh
Confidence 3333444455677787 999999886554
No 22
>PHA02791 ankyrin-like protein; Provisional
Probab=98.87 E-value=1.9e-09 Score=96.70 Aligned_cols=97 Identities=10% Similarity=0.014 Sum_probs=69.1
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+.+|.+|+||||+|+++|+.+++++|++.+ ..+|.+ +|+||||+|+..++.+.+.. ..+
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~g-----a~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~T 96 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLNAG-----ALKNLL--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNT 96 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCc-----CCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 457899999999999999999999999864 335555 47899999999888654321 237
Q ss_pred hhhhHHHhhhhhhhhcccccc-cccccccccC-Cccccccc
Q 041061 69 VYQFQEELQWFECVKDIAPSH-YTMHRDTRKN-MTAGDLFN 107 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G-~T~~dl~~ 107 (283)
+++.+...+..+.++.++... ..+.+++ +| .||..++.
T Consensus 97 pLh~Aa~~g~~eivk~Ll~~gadin~~~~-~g~~TpL~~Aa 136 (284)
T PHA02791 97 ALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAV 136 (284)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCcCccCC-CCCcHHHHHHH
Confidence 788777767666666655433 2344555 55 57876654
No 23
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.86 E-value=2.5e-09 Score=102.76 Aligned_cols=56 Identities=16% Similarity=0.239 Sum_probs=49.0
Q ss_pred cccccCC-CChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQK-GQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~-G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
++.+|.+ |+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.
T Consensus 160 in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g-----ad~n~~d~~g~tpLh~A~~~~~~~i 216 (477)
T PHA02878 160 INMKDRHKGNTALHYATENKDQRLTELLLSYG-----ANVNIPDKTNNSPLHHAVKHYNKPI 216 (477)
T ss_pred CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHHhCCHHH
Confidence 3567777 999999999999999999999864 4689999999999999999887554
No 24
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.84 E-value=3e-09 Score=78.01 Aligned_cols=50 Identities=24% Similarity=0.238 Sum_probs=45.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
.||+|||+|+.+||.+++++|+.. ++.++.+|+.|-|||--|+..||.++
T Consensus 33 ggR~plhyAAD~GQl~ilefli~i-----GA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISI-----GANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHh-----ccccCCccccCCcHHHHHHHHhhHHH
Confidence 699999999999999999999986 56799999999999999999999654
No 25
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.83 E-value=4.5e-09 Score=85.57 Aligned_cols=56 Identities=13% Similarity=0.075 Sum_probs=47.7
Q ss_pred ccccc-CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVN-QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D-~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+| .+|+||||+|+++|+.+++++|+++. +..+|.+|.+|.||||+|+..++.+
T Consensus 84 in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~----g~d~n~~~~~g~tpL~~A~~~~~~~ 140 (154)
T PHA02736 84 INGKERVFGNTPLHIAVYTQNYELATWLCNQP----GVNMEILNYAFKTPYYVACERHDAK 140 (154)
T ss_pred ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCC----CCCCccccCCCCCHHHHHHHcCCHH
Confidence 45667 48999999999999999999998742 3468999999999999999888743
No 26
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.82 E-value=3.9e-09 Score=101.37 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=68.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhc-CCccccc---------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADM-KHYEYGI---------------R 65 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~-~~~~~~~---------------~ 65 (283)
++.+|.+|+||||+|+++|+.+++++|++. +..+|.+|.+|+||||+|+.. ++.+.+. .
T Consensus 194 ~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~-----ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~ 268 (477)
T PHA02878 194 VNIPDKTNNSPLHHAVKHYNKPIVHILLEN-----GASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYIL 268 (477)
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCC
Confidence 466889999999999999999999999986 356899999999999999965 4433321 0
Q ss_pred CCChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccc
Q 041061 66 PGPVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 66 ~g~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
..++++.+ ....+.++.++.. ...+..|. +|.||.+++.+
T Consensus 269 g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~-~g~TpL~~A~~ 309 (477)
T PHA02878 269 GLTALHSS--IKSERKLKLLLEYGADINSLNS-YKLTPLSSAVK 309 (477)
T ss_pred CCCHHHHH--ccCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHH
Confidence 22555555 2222233333322 23456677 88999877643
No 27
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.81 E-value=2.4e-09 Score=109.57 Aligned_cols=101 Identities=23% Similarity=0.271 Sum_probs=74.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.++.+|.||||+||.+|+.++|++|+++ ++++|.+|+.|.||||.|+..|+.++... ..
T Consensus 533 v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~-----gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~ 607 (1143)
T KOG4177|consen 533 VDLRTGRGYTPLHVAVHYGNVDLVKFLLEH-----GADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGF 607 (1143)
T ss_pred eehhcccccchHHHHHhcCCchHHHHhhhC-----CccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCc
Confidence 577889999999999999999999999997 46799999999999999999998766421 22
Q ss_pred ChhhhHHHhhhhhhhhccccccc------ccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSHY------TMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~~------~~~~n~~~G~T~~dl~~~ 108 (283)
+++.++..++.++.++.+..... ....|. .|.+|.++.++
T Consensus 608 TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~-~g~~p~~v~e~ 653 (1143)
T KOG4177|consen 608 TPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENR-KGAVPEDVAEE 653 (1143)
T ss_pred chhHHHHHhcccchhhHHHhccCccccccchhhhh-cccChhhHHHH
Confidence 56777777766665544322111 233444 78888876543
No 28
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.80 E-value=1.7e-09 Score=100.00 Aligned_cols=56 Identities=25% Similarity=0.312 Sum_probs=49.9
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
.|..|+.|+|+||+|+.+||.+|+++|++. ++++|.++..|||+||.++..|+.+.
T Consensus 143 ~~IanrhGhTcLmIa~ykGh~~I~qyLle~-----gADvn~ks~kGNTALH~caEsG~vdi 198 (615)
T KOG0508|consen 143 PEIANRHGHTCLMIACYKGHVDIAQYLLEQ-----GADVNAKSYKGNTALHDCAESGSVDI 198 (615)
T ss_pred CcccccCCCeeEEeeeccCchHHHHHHHHh-----CCCcchhcccCchHHHhhhhcccHHH
Confidence 367899999999999999999999999986 46799999999999999999988554
No 29
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.80 E-value=5.3e-09 Score=94.31 Aligned_cols=99 Identities=10% Similarity=-0.042 Sum_probs=52.1
Q ss_pred cccCCCChH-HHHHHHhCCHHHHHHHHHhCCCCcccccccc----cCCCCcHHHHHHhcCCcccccC-------------
Q 041061 4 TVNQKGQTI-LHVAVRRRRHDIFQFIVEKMPLYVPKWAARI----DENGYTILHHVADMKHYEYGIR------------- 65 (283)
Q Consensus 4 ~~D~~G~t~-LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~----D~~GnTpLHlAa~~~~~~~~~~------------- 65 (283)
.+|++|+|+ ||.|++.|+.+++++|++++ +.+|.+ |++|.||||+|+..++.+.+..
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~G-----AdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~ 101 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKLG-----ADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAE 101 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHCC-----CCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccC
Confidence 455555553 44444445666666666543 335554 3466666666666555432210
Q ss_pred --CCChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccc
Q 041061 66 --PGPVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 66 --~g~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
..+++..+...++.+.++.++.. ...+.++. +|.||.+++.+
T Consensus 102 ~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~-~G~TpL~~A~~ 146 (300)
T PHA02884 102 EAKITPLYISVLHGCLKCLEILLSYGADINIQTN-DMVTPIELALM 146 (300)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHH
Confidence 11344444444444444444433 23455666 89999887644
No 30
>PHA02795 ankyrin-like protein; Provisional
Probab=98.78 E-value=7.5e-09 Score=97.30 Aligned_cols=53 Identities=23% Similarity=0.353 Sum_probs=47.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
++.+|.+|+||||+|+.+|+.+++++|+++ ++.+|.+|.+|+||||+|+..|+
T Consensus 214 IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~-----GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 214 INQLDAGGRTLLYRAIYAGYIDLVSWLLEN-----GANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred cCcCCCCCCCHHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHcCC
Confidence 577899999999999999999999999986 45689999999999999998875
No 31
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.78 E-value=6.1e-09 Score=100.53 Aligned_cols=56 Identities=13% Similarity=0.261 Sum_probs=50.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
++.+|.+|+||||+|+.+|+.+++++|+++ ++.+|.+|.+|+||||+|+..++.+.
T Consensus 249 vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~-----Gadin~~d~~G~TpL~~A~~~~~~~i 304 (494)
T PHA02989 249 INKKDKKGFNPLLISAKVDNYEAFNYLLKL-----GDDIYNVSKDGDTVLTYAIKHGNIDM 304 (494)
T ss_pred CCCCCCCCCCHHHHHHHhcCHHHHHHHHHc-----CCCccccCCCCCCHHHHHHHcCCHHH
Confidence 477899999999999999999999999986 45699999999999999999988654
No 32
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.76 E-value=1e-08 Score=84.76 Aligned_cols=55 Identities=16% Similarity=0.294 Sum_probs=47.2
Q ss_pred ccccc-CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 2 LSTVN-QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 2 ie~~D-~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
++.+| ..|+||||+|+.+|+.+++++|+++. +..++.+|.+|+||||+|+..++.
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~----gad~~~~d~~g~tpL~~A~~~~~~ 141 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLCRQL----GVNLGAINYQHETAYHIAYKMRDR 141 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcc----CCCccCcCCCCCCHHHHHHHcCCH
Confidence 45677 58999999999999999999998532 356889999999999999988874
No 33
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.76 E-value=7.6e-09 Score=96.72 Aligned_cols=51 Identities=29% Similarity=0.414 Sum_probs=46.2
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
.-|++|-|+||-|+-.||.+||++|++. +..+|..|.||+||||+||..++
T Consensus 578 qpNdEGITaLHNAiCaghyeIVkFLi~~-----ganVNa~DSdGWTPLHCAASCNn 628 (752)
T KOG0515|consen 578 QPNDEGITALHNAICAGHYEIVKFLIEF-----GANVNAADSDGWTPLHCAASCNN 628 (752)
T ss_pred CCCccchhHHhhhhhcchhHHHHHHHhc-----CCcccCccCCCCchhhhhhhcCc
Confidence 3578999999999999999999999986 56799999999999999997665
No 34
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.75 E-value=9.8e-09 Score=96.63 Aligned_cols=48 Identities=21% Similarity=0.314 Sum_probs=22.9
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
.+|+||||+|+..|+.+++++|++.+ ..+|.+|.+|+||||+|+..|+
T Consensus 100 ~~g~tpL~~A~~~~~~~iv~~Ll~~g-----ad~~~~~~~g~tpLh~A~~~~~ 147 (413)
T PHA02875 100 KDGMTPLHLATILKKLDIMKLLIARG-----ADPDIPNTDKFSPLHLAVMMGD 147 (413)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCC-----CCCCCCCCCCCCHHHHHHHcCC
Confidence 34455555555555555555554432 2344445555555555554444
No 35
>PHA03095 ankyrin-like protein; Provisional
Probab=98.73 E-value=1.3e-08 Score=97.16 Aligned_cols=100 Identities=14% Similarity=0.033 Sum_probs=64.5
Q ss_pred cccccCCCChHHHHHHHhC---CHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC-cccccC------------
Q 041061 2 LSTVNQKGQTILHVAVRRR---RHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH-YEYGIR------------ 65 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g---~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~-~~~~~~------------ 65 (283)
++.+|..|+||||+|+.++ +.+++++|++. +..+|.+|.+|+||||+|+..++ .+.+..
T Consensus 40 vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~-----Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~ 114 (471)
T PHA03095 40 VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEA-----GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD 114 (471)
T ss_pred cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC
Confidence 3567888899999999988 88999998876 35688888899999999998884 433210
Q ss_pred --CCChhhhHHHh--hhhhhhhccccc-ccccccccccCCccccccc
Q 041061 66 --PGPVYQFQEEL--QWFECVKDIAPS-HYTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 66 --~g~al~l~~~l--~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~ 107 (283)
..++++.+..- ...+.++.++.. ...+.+|. +|.||.+++.
T Consensus 115 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~-~g~tpL~~a~ 160 (471)
T PHA03095 115 KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDL-YGMTPLAVLL 160 (471)
T ss_pred CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHH
Confidence 22555554311 112233333322 22345566 7888876543
No 36
>PHA02741 hypothetical protein; Provisional
Probab=98.72 E-value=1.6e-08 Score=83.86 Aligned_cols=55 Identities=18% Similarity=0.254 Sum_probs=47.1
Q ss_pred cccccC-CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 2 LSTVNQ-KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 2 ie~~D~-~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
++.+|. +|+||||+|+.+++.+++++|++.. +..++.+|.+|.||||+|+..++.
T Consensus 90 in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~----g~~~~~~n~~g~tpL~~A~~~~~~ 145 (169)
T PHA02741 90 INAQEMLEGDTALHLAAHRRDHDLAEWLCCQP----GIDLHFCNADNKSPFELAIDNEDV 145 (169)
T ss_pred CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCC----CCCCCcCCCCCCCHHHHHHHCCCH
Confidence 456674 8999999999999999999998742 346889999999999999988864
No 37
>PHA02798 ankyrin-like protein; Provisional
Probab=98.72 E-value=1.4e-08 Score=97.92 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=49.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|..|+||||+||.+|+.+++++|+++ ++.+|.+|.+|+||||+|+..++.+
T Consensus 251 vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~-----GAdin~~d~~G~TpL~~A~~~~~~~ 305 (489)
T PHA02798 251 INQVDELGFNPLYYSVSHNNRKIFEYLLQL-----GGDINIITELGNTCLFTAFENESKF 305 (489)
T ss_pred CCCcCcCCccHHHHHHHcCcHHHHHHHHHc-----CCcccccCCCCCcHHHHHHHcCcHH
Confidence 467899999999999999999999999986 4569999999999999999988754
No 38
>PHA02730 ankyrin-like protein; Provisional
Probab=98.72 E-value=1.3e-08 Score=100.08 Aligned_cols=50 Identities=18% Similarity=0.284 Sum_probs=45.3
Q ss_pred cccCCCChHHHHHHHhC---CHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcC
Q 041061 4 TVNQKGQTILHVAVRRR---RHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMK 58 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g---~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~ 58 (283)
.+|.+|+||||+|+.+| +.+++++|+++ ++.+|.+|++|+||||+|+..+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~-----GAdin~kD~~G~TPLh~Aa~~~ 88 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSR-----GVERLCRNNEGLTPLGVYSKRK 88 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhC-----CCCCcccCCCCCChHHHHHHcC
Confidence 67899999999999997 59999999986 4669999999999999999866
No 39
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.71 E-value=1.2e-08 Score=97.71 Aligned_cols=53 Identities=21% Similarity=0.366 Sum_probs=31.3
Q ss_pred cccCCCChHHHHHHHhC--CHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 4 TVNQKGQTILHVAVRRR--RHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g--~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
..|.+|+||||+|+..| +.+++++|++++ ..+|.+|.+|+||||+|+..++.+
T Consensus 136 ~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g-----~din~~d~~g~tpL~~A~~~~~~~ 190 (480)
T PHA03100 136 IKNSDGENLLHLYLESNKIDLKILKLLIDKG-----VDINAKNRYGYTPLHIAVEKGNID 190 (480)
T ss_pred ccCCCCCcHHHHHHHcCCChHHHHHHHHHCC-----CCcccccCCCCCHHHHHHHhCCHH
Confidence 44556666666666666 566666665542 335666666666666666665543
No 40
>PHA03095 ankyrin-like protein; Provisional
Probab=98.70 E-value=1.5e-08 Score=96.79 Aligned_cols=54 Identities=17% Similarity=0.102 Sum_probs=28.6
Q ss_pred ccccCCCChHHHHHHHhCCH--HHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 3 STVNQKGQTILHVAVRRRRH--DIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~--~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
+.+|.+|+||||+|+.+|+. .+++.+++. +..+|.+|.+|+||||+|+..|+.+
T Consensus 216 ~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~-----g~din~~d~~g~TpLh~A~~~~~~~ 271 (471)
T PHA03095 216 AATDMLGNTPLHSMATGSSCKRSLVLPLLIA-----GISINARNRYGQTPLHYAAVFNNPR 271 (471)
T ss_pred cccCCCCCCHHHHHHhcCCchHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 34555566666666655543 344444443 2345555666666666665555443
No 41
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.70 E-value=2.7e-08 Score=85.42 Aligned_cols=49 Identities=18% Similarity=0.293 Sum_probs=31.7
Q ss_pred ccccCCCChHHHHHHHhC--CHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHh
Q 041061 3 STVNQKGQTILHVAVRRR--RHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVAD 56 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g--~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~ 56 (283)
+..|+.|+||||+|+.++ +.+++++|+++ +..+|.+| .+|.||||+|+.
T Consensus 45 n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~-----gadvn~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 45 NDCNDLYETPIFSCLEKDKVNVEILKFLIEN-----GADVNFKTRDNNLSALHHYLS 96 (209)
T ss_pred hccCccCCCHHHHHHHcCCCCHHHHHHHHHC-----CCCCCccCCCCCCCHHHHHHH
Confidence 455667777777777644 66777777765 33466665 367777777664
No 42
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.69 E-value=1.1e-08 Score=97.82 Aligned_cols=101 Identities=19% Similarity=0.152 Sum_probs=70.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCccccc---CCC----------
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYGI---RPG---------- 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~~---~~g---------- 67 (283)
++..|++|-|+||+|+.+++.+++++|++++ +.+|+.+ .-|-||||+|+++|+...+. ..|
T Consensus 71 v~~~D~~g~tlLHWAAiNNrl~v~r~li~~g-----advn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G 145 (600)
T KOG0509|consen 71 VNNPDREGVTLLHWAAINNRLDVARYLISHG-----ADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQG 145 (600)
T ss_pred CCCCCcCCccceeHHHHcCcHHHHHHHHHcC-----CCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCC
Confidence 3567889999999999999999999999874 4688888 78889999999999866532 122
Q ss_pred -ChhhhHHHhhhhhhhhcccc-cccccccccccCCcccccccc
Q 041061 68 -PVYQFQEELQWFECVKDIAP-SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 -~al~l~~~l~~~~~v~~~~~-~~~~~~~n~~~G~T~~dl~~~ 108 (283)
++++++.......-+-.++. ....+.+++ +|.||+..+..
T Consensus 146 ~~~lHla~~~~~~~~vayll~~~~d~d~~D~-~grTpLmwAay 187 (600)
T KOG0509|consen 146 LTPLHLAAQFGHTALVAYLLSKGADIDLRDN-NGRTPLMWAAY 187 (600)
T ss_pred CcHHHHHHHhCchHHHHHHHHhcccCCCcCC-CCCCHHHHHHH
Confidence 34444444333333322221 244567777 99999887654
No 43
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.69 E-value=1.9e-08 Score=94.68 Aligned_cols=54 Identities=9% Similarity=0.084 Sum_probs=38.9
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
+.++.+|.||||+|+..|+.+++++|++.+ ..++.+|.+|+||||.|+..|+.+
T Consensus 29 n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~t~L~~A~~~g~~~ 82 (413)
T PHA02875 29 NFEIYDGISPIKLAMKFRDSEAIKLLMKHG-----AIPDVKYPDIESELHDAVEEGDVK 82 (413)
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCC-----CCccccCCCcccHHHHHHHCCCHH
Confidence 455678888888888888888888888764 335566666666666666666544
No 44
>PHA02917 ankyrin-like protein; Provisional
Probab=98.67 E-value=3.1e-08 Score=98.65 Aligned_cols=98 Identities=10% Similarity=0.069 Sum_probs=67.6
Q ss_pred ccccCCCChHHHHHHHh---CCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc--------cCCC----
Q 041061 3 STVNQKGQTILHVAVRR---RRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG--------IRPG---- 67 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~---g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~--------~~~g---- 67 (283)
+.+|++|+||||+|+.. |+.+++++|++.+ +.++.+|.+|+||||.|+..|+.+.. ...|
T Consensus 26 ~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~g-----a~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~ 100 (661)
T PHA02917 26 DTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSG-----TNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNI 100 (661)
T ss_pred cccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCC-----CCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCC
Confidence 45699999999998665 7899999999863 56889999999999999998874321 1111
Q ss_pred ----ChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccc
Q 041061 68 ----PVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLF 106 (283)
Q Consensus 68 ----~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~ 106 (283)
+.+.++..-...+.++.++.. ...+.++. +|.||.+.+
T Consensus 101 ~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~-~g~T~L~~~ 143 (661)
T PHA02917 101 NDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCE-NHRSVIENY 143 (661)
T ss_pred CCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCC-CCccHHHHH
Confidence 122233333334555555533 23456666 899999854
No 45
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.67 E-value=4.6e-08 Score=97.67 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=49.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|++. +..+|.+|.+|+||||+|+..++.+
T Consensus 108 in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-----Gadvn~~d~~G~TpLh~A~~~g~~~ 162 (664)
T PTZ00322 108 PNCRDYDGRTPLHIACANGHVQVVRVLLEF-----GADPTLLDKDGKTPLELAEENGFRE 162 (664)
T ss_pred CCCcCCCCCcHHHHHHHCCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHCCcHH
Confidence 467899999999999999999999999986 3568999999999999999988754
No 46
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.61 E-value=3.3e-08 Score=98.93 Aligned_cols=53 Identities=21% Similarity=0.239 Sum_probs=46.3
Q ss_pred ccccCCCChHHHHHHHhCCH-----HHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 3 STVNQKGQTILHVAVRRRRH-----DIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~-----~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
+.+|..|+||||+|+.+|+. +++++|++. ++.+|.+|++|+||||+|+++++.
T Consensus 491 N~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~-----GADIN~~d~~G~TPLh~A~~~g~~ 548 (764)
T PHA02716 491 AVCETSGMTPLHVSIISHTNANIVMDSFVYLLSI-----QYNINIPTKNGVTPLMLTMRNNRL 548 (764)
T ss_pred cccCCCCCCHHHHHHHcCCccchhHHHHHHHHhC-----CCCCcccCCCCCCHHHHHHHcCCc
Confidence 56789999999999999987 455999986 456999999999999999998875
No 47
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.58 E-value=5.2e-08 Score=93.30 Aligned_cols=102 Identities=19% Similarity=0.047 Sum_probs=70.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCC------CcHHHHHHhcCC--ccccc---------
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENG------YTILHHVADMKH--YEYGI--------- 64 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~G------nTpLHlAa~~~~--~~~~~--------- 64 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..++..|.+| +||||.|+..++ .+.+.
T Consensus 169 in~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g-----a~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di 243 (480)
T PHA03100 169 INAKNRYGYTPLHIAVEKGNIDVIKFLLDNG-----ADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI 243 (480)
T ss_pred cccccCCCCCHHHHHHHhCCHHHHHHHHHcC-----CCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC
Confidence 3567889999999999999999999999864 4577778888 888888887776 43321
Q ss_pred -----CCCChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 65 -----RPGPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 65 -----~~g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
...++++.+...+..+.++.++..+ ..+.++. +|+||.+++.+.
T Consensus 244 n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~-~g~tpl~~A~~~ 293 (480)
T PHA03100 244 NIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNK-YGDTPLHIAILN 293 (480)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHh
Confidence 0235666655444444555444332 3456777 899998887543
No 48
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.57 E-value=5.5e-08 Score=97.52 Aligned_cols=101 Identities=16% Similarity=0.021 Sum_probs=66.1
Q ss_pred cccccCCCChHHHHHHHhC-CHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------C
Q 041061 2 LSTVNQKGQTILHVAVRRR-RHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------P 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g-~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~ 66 (283)
++.+|..|+||||+|+..+ +.+++++|++. +..+|.+|.+|+||||+|+..++.+.+.. .
T Consensus 334 in~~d~~g~TpLh~A~~~~~~~~iv~lLl~~-----gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g 408 (682)
T PHA02876 334 VNAADRLYITPLHQASTLDRNKDIVITLLEL-----GANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKI 408 (682)
T ss_pred CCCcccCCCcHHHHHHHhCCcHHHHHHHHHc-----CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCC
Confidence 4567888999999998864 67788888765 45688899999999999998887654321 2
Q ss_pred CChhhhHHHhhh-hhhhhccccc-ccccccccccCCcccccccc
Q 041061 67 GPVYQFQEELQW-FECVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 67 g~al~l~~~l~~-~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
+++++.+..... ...++.++.. ...+.+|. +|.||..++.+
T Consensus 409 ~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~-~G~TpLh~Aa~ 451 (682)
T PHA02876 409 GTALHFALCGTNPYMSVKTLIDRGANVNSKNK-DLSTPLHYACK 451 (682)
T ss_pred CchHHHHHHcCCHHHHHHHHHhCCCCCCcCCC-CCChHHHHHHH
Confidence 355555432211 1123333222 23456777 89999888754
No 49
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.55 E-value=9.4e-08 Score=95.69 Aligned_cols=52 Identities=19% Similarity=0.185 Sum_probs=44.6
Q ss_pred ccc-cCCCChHHHHHHHh--CCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 3 STV-NQKGQTILHVAVRR--RRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 3 e~~-D~~G~t~LH~Av~~--g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
+.+ |+.|+||||+|+.+ ++.+++++|+++ +..+|.+|.+|+||||+|+..++
T Consensus 170 N~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~-----GADVN~kD~~G~TPLH~Aa~~g~ 224 (764)
T PHA02716 170 NYVCKKTGYGILHAYLGNMYVDIDILEWLCNN-----GVNVNLQNNHLITPLHTYLITGN 224 (764)
T ss_pred ccccCCCCCcHHHHHHHhccCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCC
Confidence 455 88899999998754 678999999986 45699999999999999998875
No 50
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.55 E-value=1e-07 Score=57.03 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=28.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccC
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDE 45 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~ 45 (283)
+|+||||+|+++|+.+++++|++++ ..+|.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g-----a~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG-----ADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT-----SCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc-----CCCCCCCC
Confidence 6999999999999999999999964 45777774
No 51
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.55 E-value=1.2e-07 Score=72.49 Aligned_cols=53 Identities=26% Similarity=0.379 Sum_probs=45.9
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
.+|.+|+||||+|+++++.+++++|++.+. ..+.+|..|.||||.|+..++.+
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~-----~~~~~~~~g~~~l~~a~~~~~~~ 54 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGA-----DVNAKDNDGRTPLHLAAKNGHLE 54 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCC-----CCCccCCCCCcHHHHHHHcCCHH
Confidence 467899999999999999999999998643 34899999999999999887643
No 52
>PHA02798 ankyrin-like protein; Provisional
Probab=98.55 E-value=6e-08 Score=93.54 Aligned_cols=53 Identities=15% Similarity=0.145 Sum_probs=45.0
Q ss_pred cccccCCCChHHHHHHHh-----CCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 2 LSTVNQKGQTILHVAVRR-----RRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~-----g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
++.+|.+|+||||.|+.+ ++.+++++|+++ ++.+|.+|.+|+||||+|+.++.
T Consensus 64 vn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~-----GadiN~~d~~G~TpLh~a~~~~~ 121 (489)
T PHA02798 64 VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIEN-----GADINKKNSDGETPLYCLLSNGY 121 (489)
T ss_pred CCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHC-----CCCCCCCCCCcCcHHHHHHHcCC
Confidence 467889999999999875 668999999986 45699999999999999998753
No 53
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.54 E-value=1.5e-07 Score=79.31 Aligned_cols=85 Identities=21% Similarity=0.180 Sum_probs=62.5
Q ss_pred ccccCCCChHHHHHHHhCC-----HHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhh
Q 041061 3 STVNQKGQTILHVAVRRRR-----HDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQ 77 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~-----~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~ 77 (283)
+.+|.+|.|+||+|+.+++ .+++++|++.+.. ....+.+|.+|+||||+|+..++...
T Consensus 100 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~--~~~~~~~~~~g~tpl~~A~~~~~~~~--------------- 162 (235)
T COG0666 100 NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD--LDVNNLRDEDGNTPLHWAALNGDADI--------------- 162 (235)
T ss_pred ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCC--CCCccccCCCCCchhHHHHHcCchHH---------------
Confidence 6789999999999999999 9999999987430 13677889999999999999887321
Q ss_pred hhhhhhcccc-cccccccccccCCcccccccch
Q 041061 78 WFECVKDIAP-SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 78 ~~~~v~~~~~-~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
++.+++ ....+.+|. .|.|+.+.....
T Consensus 163 ----~~~ll~~~~~~~~~~~-~g~t~l~~a~~~ 190 (235)
T COG0666 163 ----VELLLEAGADPNSRNS-YGVTALDPAAKN 190 (235)
T ss_pred ----HHHHHhcCCCCccccc-CCCcchhhhccc
Confidence 111111 122344466 899998876554
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.53 E-value=7.2e-08 Score=86.81 Aligned_cols=78 Identities=29% Similarity=0.263 Sum_probs=62.2
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhcc-
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDI- 85 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~- 85 (283)
..|+|+|.+||.+|+.++++.||.- ++++|.||.||-|+|..|+..||.+. ++-+
T Consensus 338 Q~gQTALMLAVSHGr~d~vk~LLac-----gAdVNiQDdDGSTALMCA~EHGhkEi-------------------vklLL 393 (452)
T KOG0514|consen 338 QHGQTALMLAVSHGRVDMVKALLAC-----GADVNIQDDDGSTALMCAAEHGHKEI-------------------VKLLL 393 (452)
T ss_pred hhcchhhhhhhhcCcHHHHHHHHHc-----cCCCccccCCccHHHhhhhhhChHHH-------------------HHHHh
Confidence 4799999999999999999999875 56799999999999999999998432 2222
Q ss_pred -cccccccccccccCCcccccccch
Q 041061 86 -APSHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 86 -~~~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
.|.......+. ||-|++.++.+.
T Consensus 394 A~p~cd~sLtD~-DgSTAl~IAlea 417 (452)
T KOG0514|consen 394 AVPSCDISLTDV-DGSTALSIALEA 417 (452)
T ss_pred ccCcccceeecC-CCchhhhhHHhc
Confidence 23344455666 999999887654
No 55
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.53 E-value=8.9e-08 Score=95.99 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=49.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
++.+|..|+||||+|+++|+.+++++|++++ +.+|..|.+|.||||+|+..++.+.
T Consensus 171 vn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~G-----ad~n~~~~~g~t~L~~A~~~~~~~i 226 (682)
T PHA02876 171 VNAKDIYCITPIHYAAERGNAKMVNLLLSYG-----ADVNIIALDDLSVLECAVDSKNIDT 226 (682)
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCcCccCCCCCCHHHHHHHcCCHHH
Confidence 4678999999999999999999999999863 5689999999999999999887543
No 56
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.51 E-value=1.1e-07 Score=97.20 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=43.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCC--------------------------CcccccccccCCCCcHHHHHH
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPL--------------------------YVPKWAARIDENGYTILHHVA 55 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~--------------------------~~~~~vn~~D~~GnTpLHlAa 55 (283)
++.+|.+|+||||+|+.+|+.+++++|++.... ..+..+|.+|.+|+||||+|+
T Consensus 584 in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~ 663 (823)
T PLN03192 584 VHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAM 663 (823)
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 467889999999988888888888877653210 023467788888888888888
Q ss_pred hcCCc
Q 041061 56 DMKHY 60 (283)
Q Consensus 56 ~~~~~ 60 (283)
..|+.
T Consensus 664 ~~g~~ 668 (823)
T PLN03192 664 AEDHV 668 (823)
T ss_pred HCCcH
Confidence 77764
No 57
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.49 E-value=3.6e-08 Score=66.49 Aligned_cols=49 Identities=22% Similarity=0.129 Sum_probs=23.7
Q ss_pred cccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhccc-ccccccccccccCCcccccc
Q 041061 38 KWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDIA-PSHYTMHRDTRKNMTAGDLF 106 (283)
Q Consensus 38 ~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~-~~~~~~~~n~~~G~T~~dl~ 106 (283)
..+|.+|.+|+||||+|++.|+.++ ++.++ .....+.+|+ +|+||.+++
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~-------------------v~~Ll~~g~d~~~~d~-~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEV-------------------VRLLLQNGADPNAKDK-DGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHH-------------------HHHHHHCT--TT---T-TS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHH-------------------HHHHHHCcCCCCCCcC-CCCCHHHhC
Confidence 5789999999999999999988432 22222 2234567888 999998753
No 58
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.49 E-value=1e-07 Score=80.64 Aligned_cols=89 Identities=20% Similarity=0.113 Sum_probs=61.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCC----------------------------cccccccccCCCCcHHHH
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLY----------------------------VPKWAARIDENGYTILHH 53 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~----------------------------~~~~vn~~D~~GnTpLHl 53 (283)
+|..|+.|.|||.||+.+||..+|++|++++.++ .+.++|.-|-+|-|||-+
T Consensus 153 VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLly 232 (296)
T KOG0502|consen 153 VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLY 232 (296)
T ss_pred ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeee
Confidence 6788999999999999999999999999876531 123456666666666666
Q ss_pred HHhcCCcccccCCCChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccchh
Q 041061 54 VADMKHYEYGIRPGPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRTH 110 (283)
Q Consensus 54 Aa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~~ 110 (283)
|++.+| .+.++.++.++ +.....+ .|.++.|++-...
T Consensus 233 Avrgnh-------------------vkcve~Ll~sGAd~t~e~d-sGy~~mdlAValG 270 (296)
T KOG0502|consen 233 AVRGNH-------------------VKCVESLLNSGADVTQEDD-SGYWIMDLAVALG 270 (296)
T ss_pred eecCCh-------------------HHHHHHHHhcCCCcccccc-cCCcHHHHHHHhh
Confidence 665555 44455555443 3444555 7888888775544
No 59
>PF13606 Ank_3: Ankyrin repeat
Probab=98.46 E-value=2e-07 Score=54.56 Aligned_cols=25 Identities=28% Similarity=0.510 Sum_probs=23.5
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhC
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKM 32 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~ 32 (283)
+|+||||+|+++|+.|++++|++++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 5999999999999999999999874
No 60
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.41 E-value=1.4e-05 Score=81.17 Aligned_cols=48 Identities=23% Similarity=0.259 Sum_probs=43.0
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
..|+||||+|+..|+.+++++|+++ ++++|.+|+.||||||+|+..+.
T Consensus 173 ~~g~tpL~~Aa~~~~~~iv~lLl~~-----gadin~~d~~g~T~Lh~A~~~~~ 220 (743)
T TIGR00870 173 YHGESPLNAAACLGSPSIVALLSED-----PADILTADSLGNTLLHLLVMENE 220 (743)
T ss_pred cccccHHHHHHHhCCHHHHHHHhcC-----CcchhhHhhhhhHHHHHHHhhhh
Confidence 4699999999999999999999886 35689999999999999998763
No 61
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.40 E-value=3.6e-07 Score=85.94 Aligned_cols=81 Identities=17% Similarity=0.164 Sum_probs=61.3
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECV 82 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v 82 (283)
+..+.+|.|.||+|+.+|..++.++|++.+ ..++.+|.||+||||.||.-|+.+. +
T Consensus 192 d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag-----~~~~~~D~dgWtPlHAAA~Wg~~~~----------~--------- 247 (527)
T KOG0505|consen 192 DARHARGATALHVAAANGYTEVAALLLQAG-----YSVNIKDYDGWTPLHAAAHWGQEDA----------C--------- 247 (527)
T ss_pred cccccccchHHHHHHhhhHHHHHHHHHHhc-----cCcccccccCCCcccHHHHhhhHhH----------H---------
Confidence 456677999999999999999999999864 5689999999999999998776321 1
Q ss_pred hcccc-cccccccccccCCcccccccc
Q 041061 83 KDIAP-SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 83 ~~~~~-~~~~~~~n~~~G~T~~dl~~~ 108 (283)
+.++. ....+.++. .|+||.|++.+
T Consensus 248 elL~~~ga~~d~~t~-~g~~p~dv~de 273 (527)
T KOG0505|consen 248 ELLVEHGADMDAKTK-MGETPLDVADE 273 (527)
T ss_pred HHHHHhhcccchhhh-cCCCCccchhh
Confidence 11111 122345555 89999998876
No 62
>PHA02795 ankyrin-like protein; Provisional
Probab=98.40 E-value=2e-07 Score=87.84 Aligned_cols=77 Identities=12% Similarity=0.002 Sum_probs=52.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhcccc
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDIAP 87 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~~ 87 (283)
.|.+++|.|.++++.+++++|+++ ++.+|.+|.+|+||||+|+..|+.+ .++.++.
T Consensus 187 ~~~t~l~~a~~~~~~eIve~LIs~-----GADIN~kD~~G~TpLh~Aa~~g~~e-------------------iVelLL~ 242 (437)
T PHA02795 187 IQYTRGFLVDEPTVLEIYKLCIPY-----IEDINQLDAGGRTLLYRAIYAGYID-------------------LVSWLLE 242 (437)
T ss_pred hccchhHHHHhcCHHHHHHHHHhC-----cCCcCcCCCCCCCHHHHHHHcCCHH-------------------HHHHHHH
Confidence 356666777777777777777664 4568999999999999999888733 2222222
Q ss_pred c-ccccccccccCCcccccccch
Q 041061 88 S-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 88 ~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
. ...+.++. +|.||..++.+.
T Consensus 243 ~GAdIN~~d~-~G~TpLh~Aa~~ 264 (437)
T PHA02795 243 NGANVNAVMS-NGYTCLDVAVDR 264 (437)
T ss_pred CCCCCCCcCC-CCCCHHHHHHHc
Confidence 2 23456777 899999887554
No 63
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.39 E-value=2.2e-07 Score=81.52 Aligned_cols=53 Identities=25% Similarity=0.283 Sum_probs=46.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
+|..|....||||+|+.+||.+||+.|++. .+++|+.++.||||||+|+.-|.
T Consensus 60 vn~tnmgddtplhlaaahghrdivqkll~~-----kadvnavnehgntplhyacfwgy 112 (448)
T KOG0195|consen 60 VNSTNMGDDTPLHLAAAHGHRDIVQKLLSR-----KADVNAVNEHGNTPLHYACFWGY 112 (448)
T ss_pred cccccCCCCcchhhhhhcccHHHHHHHHHH-----hcccchhhccCCCchhhhhhhcH
Confidence 455667778999999999999999999986 45799999999999999998775
No 64
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.38 E-value=4.8e-07 Score=81.70 Aligned_cols=53 Identities=13% Similarity=-0.017 Sum_probs=46.0
Q ss_pred cCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccc
Q 041061 6 NQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 6 D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~ 63 (283)
|+.|+||||+|+++|+.+++++|+++ ++.+|.+| ..|+||||+|+..++.+.+
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~-----GADVN~~~~~~g~TpLh~Aa~~~~~eiv 120 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRY-----GADVNRYAEEAKITPLYISVLHGCLKCL 120 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc-----CCCcCcccCCCCCCHHHHHHHcCCHHHH
Confidence 56899999999999999999999986 45689864 6899999999998887654
No 65
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.35 E-value=4.2e-07 Score=93.49 Aligned_cols=57 Identities=21% Similarity=0.300 Sum_probs=51.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
++.+|+.|+||||.||.+|+.+|+++|+++ ++.+|..|.+|+||||.|+..|+.+..
T Consensus 566 v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~-----GA~vna~d~~g~TpL~iA~~lg~~~~~ 622 (1143)
T KOG4177|consen 566 VNAKDKLGYTPLHQAAQQGHNDIAELLLKH-----GASVNAADLDGFTPLHIAVRLGYLSVV 622 (1143)
T ss_pred ccccCCCCCChhhHHHHcChHHHHHHHHHc-----CCCCCcccccCcchhHHHHHhcccchh
Confidence 567899999999999999999999999997 467999999999999999999986643
No 66
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.34 E-value=1.4e-07 Score=85.00 Aligned_cols=102 Identities=17% Similarity=0.113 Sum_probs=71.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcC--Ccc---ccc------------
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMK--HYE---YGI------------ 64 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~--~~~---~~~------------ 64 (283)
+|..|.+|+|+|||||.+.+.++|+.||+.+. -.+|.+++-|.||..||+... ... .+.
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgv----C~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKA 336 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGV----CDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKA 336 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCc----ccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhh
Confidence 57889999999999999999999999998754 468999999999999998432 111 110
Q ss_pred -C-CCChhhhHHHhhhhhhhhcccc-cccccccccccCCcccccccc
Q 041061 65 -R-PGPVYQFQEELQWFECVKDIAP-SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 65 -~-~g~al~l~~~l~~~~~v~~~~~-~~~~~~~n~~~G~T~~dl~~~ 108 (283)
. ..++|-++-.-+..+.||.++. .+..+..++ +|-|++..+.|
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDd-DGSTALMCA~E 382 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDD-DGSTALMCAAE 382 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccC-CccHHHhhhhh
Confidence 0 1245555544455555665543 334566666 78887776654
No 67
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.34 E-value=3.9e-07 Score=85.64 Aligned_cols=53 Identities=28% Similarity=0.357 Sum_probs=48.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
+..|.+|.|+||-||.-.+.+++++|+++ ++.+|++|++||||||-|+..+|.
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e~-----ga~Vn~~d~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVEN-----GANVNAQDNEGWTPLHAAASCGYL 119 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHHh-----cCCccccccccCCcchhhcccccH
Confidence 45788999999999999999999999987 467999999999999999988874
No 68
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.32 E-value=7.1e-07 Score=86.23 Aligned_cols=51 Identities=16% Similarity=0.283 Sum_probs=32.1
Q ss_pred cccccCCCChHHHHHHHh---CCHHHHHHHHHhCCCCccccc-ccccCCCCcHHHHHHhc
Q 041061 2 LSTVNQKGQTILHVAVRR---RRHDIFQFIVEKMPLYVPKWA-ARIDENGYTILHHVADM 57 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~---g~~~iv~~Ll~~~~~~~~~~v-n~~D~~GnTpLHlAa~~ 57 (283)
++.+|.+|+||||.|+.. |+.+++++|++++ +.+ +.+|.+|+||||+|+..
T Consensus 101 in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G-----adin~~~d~~g~tpLh~a~~~ 155 (494)
T PHA02989 101 INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG-----INVNDVKNSRGYNLLHMYLES 155 (494)
T ss_pred CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC-----CCcccccCCCCCCHHHHHHHh
Confidence 355666777777766654 4567777776652 345 56677777777776543
No 69
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.30 E-value=8.7e-07 Score=87.04 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=57.9
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhcccc
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDIAP 87 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~~ 87 (283)
-|+.||-+||--+|+|++++|+++ ++++|+||.+|||.||.-+..-. .+| ++.+.+...
T Consensus 239 fGEyPLSfAAC~nq~eivrlLl~~-----gAd~~aqDS~GNTVLH~lVi~~~----------~~M------y~~~L~~ga 297 (782)
T KOG3676|consen 239 FGEYPLSFAACTNQPEIVRLLLAH-----GADPNAQDSNGNTVLHMLVIHFV----------TEM------YDLALELGA 297 (782)
T ss_pred eccCchHHHHHcCCHHHHHHHHhc-----CCCCCccccCCChHHHHHHHHHH----------HHH------HHHHHhcCC
Confidence 488999999999999999999986 56799999999999999986421 122 222221111
Q ss_pred cccccccccccCCcccccccch
Q 041061 88 SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 88 ~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
......+|+ +|.||..++...
T Consensus 298 ~~l~~v~N~-qgLTPLtLAakl 318 (782)
T KOG3676|consen 298 NALEHVRNN-QGLTPLTLAAKL 318 (782)
T ss_pred Ccccccccc-CCCChHHHHHHh
Confidence 122346777 999999887654
No 70
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.29 E-value=4.6e-07 Score=74.07 Aligned_cols=53 Identities=17% Similarity=0.142 Sum_probs=47.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
+.+.+.||||||-||+.++.+++.+|++. ++++|++.+.-.||||+|+...+.
T Consensus 124 ~a~T~~GWTPLhSAckWnN~~va~~LLqh-----gaDVnA~t~g~ltpLhlaa~~rn~ 176 (228)
T KOG0512|consen 124 EAKTNEGWTPLHSACKWNNFEVAGRLLQH-----GADVNAQTKGLLTPLHLAAGNRNS 176 (228)
T ss_pred ccccccCccchhhhhcccchhHHHHHHhc-----cCcccccccccchhhHHhhcccch
Confidence 56788999999999999999999999986 467999999999999999976654
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=98.26 E-value=9.8e-07 Score=86.34 Aligned_cols=50 Identities=10% Similarity=0.241 Sum_probs=38.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHh
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVAD 56 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~ 56 (283)
++.+|+.|+||||+|+.+++.+++++|+++ ++.+|.+|.+|+||||+|+.
T Consensus 403 IN~kD~~G~TPLh~Aa~~~n~eivelLLs~-----GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 403 INKIDKHGRSILYYCIESHSVSLVEWLIDN-----GADINITTKYGSTCIGICVI 452 (631)
T ss_pred cccccccCcchHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHH
Confidence 456777888888888888888888888775 34578888888888888764
No 72
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.25 E-value=3.5e-07 Score=89.08 Aligned_cols=101 Identities=20% Similarity=0.149 Sum_probs=71.0
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
+|..|-+|.|+||.||.+||.+++++|++. +.+++..|.+|.+|||+|+..|+.+.++. ..
T Consensus 42 ~n~qd~~gfTalhha~Lng~~~is~llle~-----ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~ 116 (854)
T KOG0507|consen 42 HNLQDYSGFTLLHHAVLNGQNQISKLLLDY-----EALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENE 116 (854)
T ss_pred ccccCccchhHHHHHHhcCchHHHHHHhcc-----hhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCc
Confidence 467788999999999999999999999875 46788899999999999999998665421 12
Q ss_pred ChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
+.++....-..++.+..++.. ...-.+|+ +++|+.|++.+
T Consensus 117 tplhlaaqhgh~dvv~~Ll~~~adp~i~nn-s~~t~ldlA~q 157 (854)
T KOG0507|consen 117 TPLHLAAQHGHLEVVFYLLKKNADPFIRNN-SKETVLDLASR 157 (854)
T ss_pred CccchhhhhcchHHHHHHHhcCCCccccCc-ccccHHHHHHH
Confidence 344444333444444433322 22345676 78888887654
No 73
>PHA02792 ankyrin-like protein; Provisional
Probab=98.23 E-value=1.3e-06 Score=85.40 Aligned_cols=54 Identities=17% Similarity=0.137 Sum_probs=48.6
Q ss_pred CcccccCCCChHHHHHHHhC-------CHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 1 MLSTVNQKGQTILHVAVRRR-------RHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 1 ~ie~~D~~G~t~LH~Av~~g-------~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
|++..|+.|+||||+|+.++ +.|++++|+.++ +.+|.+|+.|.||||+|+...+
T Consensus 167 ~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g-----~~~~~~d~~g~t~l~~~~~~~~ 227 (631)
T PHA02792 167 TTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHE-----KEMRYYTYREHTTLYYYVDKCD 227 (631)
T ss_pred ccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCC-----CCcCccCCCCChHHHHHHHccc
Confidence 46788999999999999999 899999999974 4589999999999999998773
No 74
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.23 E-value=1.6e-06 Score=63.61 Aligned_cols=68 Identities=26% Similarity=0.271 Sum_probs=47.0
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhccccc-ccc
Q 041061 13 LHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDIAPS-HYT 91 (283)
Q Consensus 13 LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~~~-~~~ 91 (283)
||+|+++|+.+++++|++... .++. |+||||+|+..|+.+. ++.++.. ...
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~-----~~~~----~~~~l~~A~~~~~~~~-------------------~~~Ll~~g~~~ 52 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGA-----DINL----GNTALHYAAENGNLEI-------------------VKLLLENGADI 52 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTS-----TTTS----SSBHHHHHHHTTTHHH-------------------HHHHHHTTTCT
T ss_pred CHHHHHcCCHHHHHHHHHCcC-----CCCC----CCCHHHHHHHcCCHHH-------------------HHHHHHhcccc
Confidence 899999999999999998632 2333 9999999999887432 2222221 123
Q ss_pred cccccccCCcccccccch
Q 041061 92 MHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 92 ~~~n~~~G~T~~dl~~~~ 109 (283)
+.++. +|.||...+.+.
T Consensus 53 ~~~~~-~g~t~L~~A~~~ 69 (89)
T PF12796_consen 53 NSQDK-NGNTALHYAAEN 69 (89)
T ss_dssp T-BST-TSSBHHHHHHHT
T ss_pred cccCC-CCCCHHHHHHHc
Confidence 44555 899998876543
No 75
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.17 E-value=1.7e-06 Score=87.61 Aligned_cols=50 Identities=22% Similarity=0.271 Sum_probs=41.0
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc--------------CCCCcHHHHHHhcCCcc
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID--------------ENGYTILHHVADMKHYE 61 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D--------------~~GnTpLHlAa~~~~~~ 61 (283)
..|+||||+|+.+|+.+++++|++++. .+|.++ ..|.||||+|+..++.+
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GA-----dv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~ 189 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGA-----SVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPS 189 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCC-----CCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHH
Confidence 579999999999999999999998753 344332 36999999999888744
No 76
>PHA02917 ankyrin-like protein; Provisional
Probab=98.13 E-value=3.2e-06 Score=84.38 Aligned_cols=54 Identities=22% Similarity=0.456 Sum_probs=47.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHh-cCCc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVAD-MKHY 60 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~-~~~~ 60 (283)
++.+|..|+||||+|+.+++.+++++|++. +..+|.+|.+|+||||+|+. .++.
T Consensus 445 IN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~-----GAdin~~d~~G~T~L~~A~~~~~~~ 499 (661)
T PHA02917 445 INMIDKRGETLLHKAVRYNKQSLVSLLLES-----GSDVNIRSNNGYTCIAIAINESRNI 499 (661)
T ss_pred CCCCCCCCcCHHHHHHHcCCHHHHHHHHHC-----cCCCCCCCCCCCCHHHHHHHhCCCH
Confidence 477899999999999999999999999986 45699999999999999995 4443
No 77
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.12 E-value=3e-06 Score=79.75 Aligned_cols=55 Identities=18% Similarity=0.277 Sum_probs=49.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
|+.+|..|+||||+||.-|+.+.++.|+..+ +.+..+|++|++|||.|+..|+..
T Consensus 48 id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~-----Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 48 IDRRDPPGRTPLHLAVRLGHVEAARILLSAG-----ADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred eccccCCCCccHHHHHHhcCHHHHHHHHhcC-----CCccccccccccHHHHHHHcCCHH
Confidence 5788999999999999999999999999864 458899999999999999998754
No 78
>PHA02730 ankyrin-like protein; Provisional
Probab=98.09 E-value=3.7e-06 Score=83.10 Aligned_cols=51 Identities=12% Similarity=0.077 Sum_probs=45.9
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccC-CCCcHHHHHHhc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDE-NGYTILHHVADM 57 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~-~GnTpLHlAa~~ 57 (283)
++.+|..|+||||+|+..++.+++++|++. ++.+|.+|+ .|+||||.|+..
T Consensus 455 INakD~~G~TPLh~Aa~~~~~eive~LI~~-----GAdIN~~d~~~g~TaL~~Aa~~ 506 (672)
T PHA02730 455 IDMIDNENKTLLYYAVDVNNIQFARRLLEY-----GASVNTTSRSIINTAIQKSSYR 506 (672)
T ss_pred hhccCCCCCCHHHHHHHhCCHHHHHHHHHC-----CCCCCCCCCcCCcCHHHHHHHh
Confidence 578899999999999999999999999986 456999997 599999999974
No 79
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.95 E-value=8.4e-06 Score=54.23 Aligned_cols=28 Identities=29% Similarity=0.579 Sum_probs=21.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHH
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIV 29 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll 29 (283)
++.+|++|+||||+|+++|+.+++++|+
T Consensus 27 in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 27 INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 4678999999999999999999999985
No 80
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=97.95 E-value=1.3e-05 Score=70.47 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=58.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccc-cccCCCCcHHHHHHhcCCcccc--------------cCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAA-RIDENGYTILHHVADMKHYEYG--------------IRP 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn-~~D~~GnTpLHlAa~~~~~~~~--------------~~~ 66 (283)
++.+|.+|.++|-.|+..|+.+.+++|++. ++++| .+|..|.||||.||-.|+.++- .+.
T Consensus 38 vn~~D~sGMs~LahAaykGnl~~v~lll~~-----gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvg 112 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLTLVELLLEL-----GADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVG 112 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHHHHHHHHHh-----CCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchh
Confidence 478899999999999999999999999986 34576 5789999999999999885431 123
Q ss_pred CChhhhHHHhhhhh
Q 041061 67 GPVYQFQEELQWFE 80 (283)
Q Consensus 67 g~al~l~~~l~~~~ 80 (283)
.++-+|+.-.+..+
T Consensus 113 rTAaqmAAFVG~H~ 126 (396)
T KOG1710|consen 113 RTAAQMAAFVGHHE 126 (396)
T ss_pred hhHHHHHHHhcchH
Confidence 46777776555444
No 81
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=97.93 E-value=1.9e-05 Score=60.06 Aligned_cols=53 Identities=26% Similarity=0.360 Sum_probs=46.7
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
+..|..|.|+||+|+..++.+++++|++.+ ..++..|.+|.||+|.|+..++.
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~-----~~~~~~~~~~~~~l~~a~~~~~~ 86 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKG-----ADVNARDKDGNTPLHLAARNGNL 86 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHHcCcH
Confidence 467889999999999999999999999864 35788899999999999988763
No 82
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.93 E-value=2.3e-06 Score=84.17 Aligned_cols=57 Identities=23% Similarity=0.381 Sum_probs=51.0
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~ 63 (283)
++.+|.-|||+||+|+..++.++++.|++++ ..++.|| +.|.||||-|...|+.++.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhG-----idv~vqD~ESG~taLHRaiyyG~idca 102 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHG-----IDVFVQDEESGYTALHRAIYYGNIDCA 102 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcC-----ceeeeccccccchHhhHhhhhchHHHH
Confidence 4678999999999999999999999999973 5688898 5899999999999997764
No 83
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.92 E-value=6e-06 Score=78.24 Aligned_cols=53 Identities=25% Similarity=0.389 Sum_probs=47.5
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
.++.+-++.||+|++.|+.+||+|++++++ ..++++.|+.|.|+||-|+..++
T Consensus 894 ~~~~~~~sllh~a~~tg~~eivkyildh~p---~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 894 IQGPDHCSLLHYAAKTGNGEIVKYILDHGP---SELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred eeCcchhhHHHHHHhcCChHHHHHHHhcCC---HHHHHHHhhhhhHHHHHHHHhcc
Confidence 356778999999999999999999999876 57899999999999999997765
No 84
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=97.89 E-value=1.2e-05 Score=80.54 Aligned_cols=46 Identities=15% Similarity=-0.025 Sum_probs=40.5
Q ss_pred HHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 12 ILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 12 ~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
.||.|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..|+.+.
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~G-----adin~~d~~G~TpLh~Aa~~g~~ei 130 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGG-----ADPNCRDYDGRTPLHIACANGHVQV 130 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCcHHHHHHHCCCHHH
Confidence 488999999999999999863 4689999999999999999998543
No 85
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.81 E-value=6.5e-06 Score=80.44 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=62.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccccc--------------CCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGI--------------RPG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~--------------~~g 67 (283)
++..|.+|.+|||+|+.+|+.++++.++... +.+|.+..+|.||||+||..+|.+++. ..+
T Consensus 75 ldl~d~kg~~plhlaaw~g~~e~vkmll~q~-----d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~ 149 (854)
T KOG0507|consen 75 LDLCDTKGILPLHLAAWNGNLEIVKMLLLQT-----DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKE 149 (854)
T ss_pred hhhhhccCcceEEehhhcCcchHHHHHHhcc-----cCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccc
Confidence 4667899999999999999999999998763 468999999999999999999987642 135
Q ss_pred ChhhhHHHhhhhhhhh
Q 041061 68 PVYQFQEELQWFECVK 83 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~ 83 (283)
+.++++.+++..+.+.
T Consensus 150 t~ldlA~qfgr~~Vvq 165 (854)
T KOG0507|consen 150 TVLDLASRFGRAEVVQ 165 (854)
T ss_pred cHHHHHHHhhhhHHHH
Confidence 7788877766655443
No 86
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=97.75 E-value=2.8e-05 Score=65.31 Aligned_cols=54 Identities=24% Similarity=0.239 Sum_probs=47.5
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
+.+|.+|+||||+|+.+|+.+++++|++.+ ..++..|..|.|+||.|+..++.+
T Consensus 141 ~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~-----~~~~~~~~~g~t~l~~a~~~~~~~ 194 (235)
T COG0666 141 NLRDEDGNTPLHWAALNGDADIVELLLEAG-----ADPNSRNSYGVTALDPAAKNGRIE 194 (235)
T ss_pred cccCCCCCchhHHHHHcCchHHHHHHHhcC-----CCCcccccCCCcchhhhcccchHH
Confidence 456999999999999999999999999874 457888999999999999888743
No 87
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=97.74 E-value=1.1e-05 Score=68.47 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=49.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
+|..|-+|-|||-+||+.||.++++.|++. +++++..|..|++++.+|+..|..
T Consensus 219 VNvyDwNGgTpLlyAvrgnhvkcve~Ll~s-----GAd~t~e~dsGy~~mdlAValGyr 272 (296)
T KOG0502|consen 219 VNVYDWNGGTPLLYAVRGNHVKCVESLLNS-----GADVTQEDDSGYWIMDLAVALGYR 272 (296)
T ss_pred cceeccCCCceeeeeecCChHHHHHHHHhc-----CCCcccccccCCcHHHHHHHhhhH
Confidence 577899999999999999999999999987 467999999999999999998863
No 88
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.74 E-value=2.7e-05 Score=72.65 Aligned_cols=56 Identities=25% Similarity=0.289 Sum_probs=48.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
++.++.+|+|+||.|++.|+.|++++|++++. .=.+|..|-|||-.|+..|+.+.+
T Consensus 176 vn~ks~kGNTALH~caEsG~vdivq~Ll~~ga------~i~~d~~GmtPL~~Aa~tG~~~iV 231 (615)
T KOG0508|consen 176 VNAKSYKGNTALHDCAESGSVDIVQLLLKHGA------KIDVDGHGMTPLLLAAVTGHTDIV 231 (615)
T ss_pred cchhcccCchHHHhhhhcccHHHHHHHHhCCc------eeeecCCCCchHHHHhhhcchHHH
Confidence 46788999999999999999999999998743 336889999999999999986654
No 89
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.64 E-value=9.9e-05 Score=69.19 Aligned_cols=50 Identities=24% Similarity=0.197 Sum_probs=44.0
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++|.||||+|++.|+..-+++|.-. +++++.+|.+|.||+.+|-..||.+
T Consensus 165 ekg~TpLHvAAk~Gq~~Q~ElL~vY-----GAD~~a~d~~GmtP~~~AR~~gH~~ 214 (669)
T KOG0818|consen 165 EKGNTPLHVAAKAGQILQAELLAVY-----GADPGAQDSSGMTPVDYARQGGHHE 214 (669)
T ss_pred ccCCchhHHHHhccchhhhhHHhhc-----cCCCCCCCCCCCcHHHHHHhcCchH
Confidence 5799999999999999999998654 5679999999999999999888853
No 90
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.61 E-value=1.9e-05 Score=73.53 Aligned_cols=56 Identities=27% Similarity=0.329 Sum_probs=47.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|-+.+|+||+|+..|+.+++++|++. ++...+.+|.-|+|||.-|...+|.+
T Consensus 532 ~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~----~kv~~~~kDRw~rtPlDdA~~F~h~~ 587 (622)
T KOG0506|consen 532 LETKDYDDRTALHVAAAEGHVEVVKFLLNA----CKVDPDPKDRWGRTPLDDAKHFKHKE 587 (622)
T ss_pred ccccccccchhheeecccCceeHHHHHHHH----HcCCCChhhccCCCcchHhHhcCcHH
Confidence 467788999999999999999999999887 34568899999999999999888754
No 91
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.41 E-value=0.00013 Score=69.66 Aligned_cols=52 Identities=23% Similarity=0.212 Sum_probs=45.0
Q ss_pred cCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 6 NQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 6 D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
+.+|+|+||+|++.|+....++|+.. +.++-..|.+|+|+|.+|-..|..++
T Consensus 658 ~~~grt~LHLa~~~gnVvl~QLLiWy-----g~dv~~rda~g~t~l~yar~a~sqec 709 (749)
T KOG0705|consen 658 EGDGRTALHLAARKGNVVLAQLLIWY-----GVDVMARDAHGRTALFYARQAGSQEC 709 (749)
T ss_pred CCCCcchhhhhhhhcchhHHHHHHHh-----CccceecccCCchhhhhHhhcccHHH
Confidence 57899999999999999999999865 45688999999999999988776443
No 92
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.38 E-value=0.00032 Score=65.89 Aligned_cols=88 Identities=23% Similarity=0.187 Sum_probs=61.0
Q ss_pred ccCCCChH------HHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccccCCCChhhhHHHhh
Q 041061 5 VNQKGQTI------LHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYGIRPGPVYQFQEELQ 77 (283)
Q Consensus 5 ~D~~G~t~------LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~ 77 (283)
+|++|.+. ||-.|+.|+.+..-.|+.. ++..|-.| ..|+||||.|++.|+.. |.|+.
T Consensus 123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~l-----GA~~N~~hpekg~TpLHvAAk~Gq~~-----------Q~ElL 186 (669)
T KOG0818|consen 123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSL-----GAQANFFHPEKGNTPLHVAAKAGQIL-----------QAELL 186 (669)
T ss_pred CCcchhhHHHHHHHHHHHhhcccHHHHHHHHHc-----ccccCCCCcccCCchhHHHHhccchh-----------hhhHH
Confidence 57777665 9999999999887666664 45678777 68999999999998742 22221
Q ss_pred hhhhhhcccccccccccccccCCcccccccch-hhhhHHh
Q 041061 78 WFECVKDIAPSHYTMHRDTRKNMTAGDLFNRT-HEDQLKK 116 (283)
Q Consensus 78 ~~~~v~~~~~~~~~~~~n~~~G~T~~dl~~~~-~~~~~~~ 116 (283)
. +-.+.....|. +|.||.+++++. |.++.++
T Consensus 187 ~-------vYGAD~~a~d~-~GmtP~~~AR~~gH~~laeR 218 (669)
T KOG0818|consen 187 A-------VYGADPGAQDS-SGMTPVDYARQGGHHELAER 218 (669)
T ss_pred h-------hccCCCCCCCC-CCCcHHHHHHhcCchHHHHH
Confidence 1 11223455666 999999998764 4444443
No 93
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.10 E-value=0.00052 Score=68.01 Aligned_cols=57 Identities=19% Similarity=0.262 Sum_probs=49.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+|+||..|.+-..++.+++++.+. ..+...++++|-|||-+||+.|..+
T Consensus 266 ~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga---~~l~~v~N~qgLTPLtLAaklGk~e 322 (782)
T KOG3676|consen 266 PNAQDSNGNTVLHMLVIHFVTEMYDLALELGA---NALEHVRNNQGLTPLTLAAKLGKKE 322 (782)
T ss_pred CCccccCCChHHHHHHHHHHHHHHHHHHhcCC---CccccccccCCCChHHHHHHhhhHH
Confidence 46789999999999999999999999998765 2567889999999999999988743
No 94
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.08 E-value=0.00036 Score=70.61 Aligned_cols=49 Identities=27% Similarity=0.355 Sum_probs=44.4
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
..|.|+||.|+.++...+.++|++++ +.+|+.|..|+||||.+...|+.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~g-----a~vn~~d~~g~~plh~~~~~g~~ 702 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNG-----ADVNALDSKGRTPLHHATASGHT 702 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcC-----CcchhhhccCCCcchhhhhhccc
Confidence 46899999999999999999999874 45999999999999999998874
No 95
>PF13606 Ank_3: Ankyrin repeat
Probab=96.76 E-value=0.00061 Score=39.63 Aligned_cols=16 Identities=44% Similarity=0.435 Sum_probs=14.1
Q ss_pred CCCcHHHHHHhcCCcc
Q 041061 46 NGYTILHHVADMKHYE 61 (283)
Q Consensus 46 ~GnTpLHlAa~~~~~~ 61 (283)
+|+||||+|+..|+.+
T Consensus 1 ~G~T~Lh~A~~~g~~e 16 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIE 16 (30)
T ss_pred CCCCHHHHHHHhCCHH
Confidence 6999999999999854
No 96
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=96.71 E-value=0.00066 Score=40.18 Aligned_cols=16 Identities=38% Similarity=0.445 Sum_probs=14.0
Q ss_pred CCCcHHHHHHhcCCcc
Q 041061 46 NGYTILHHVADMKHYE 61 (283)
Q Consensus 46 ~GnTpLHlAa~~~~~~ 61 (283)
+|+||||+|+..++.+
T Consensus 1 dG~TpLh~A~~~~~~~ 16 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPD 16 (33)
T ss_dssp TSBBHHHHHHHTTCHH
T ss_pred CcccHHHHHHHHHHHH
Confidence 6999999999998754
No 97
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=96.54 E-value=0.0032 Score=52.53 Aligned_cols=57 Identities=11% Similarity=0.152 Sum_probs=50.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
||.+|.-|||+|..|+..|+.+++.+|+.++. +.+-..|..|++++.+|-+.|+...
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~----a~vgv~d~ssldaaqlaek~g~~~f 61 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGV----AFVGVTDESSLDAAQLAEKGGAQAF 61 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCc----ccccccccccchHHHHHHhcChHHH
Confidence 68899999999999999999999999998742 5678899999999999999887543
No 98
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=96.53 E-value=0.0018 Score=61.41 Aligned_cols=46 Identities=20% Similarity=0.107 Sum_probs=37.1
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHH
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTIL 51 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpL 51 (283)
+|..|++||||||+|+.+++.-+++.|++.+. +..-..=.|+.|+.
T Consensus 609 VNa~DSdGWTPLHCAASCNnv~~ckqLVe~Ga----avfAsTlSDmeTa~ 654 (752)
T KOG0515|consen 609 VNAADSDGWTPLHCAASCNNVPMCKQLVESGA----AVFASTLSDMETAA 654 (752)
T ss_pred ccCccCCCCchhhhhhhcCchHHHHHHHhccc----eEEeeecccccchh
Confidence 57889999999999999999999999999754 33444556777764
No 99
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.42 E-value=0.0047 Score=33.52 Aligned_cols=25 Identities=24% Similarity=0.498 Sum_probs=22.7
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhC
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKM 32 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~ 32 (283)
+|.|++|+|+..++.+++++|++.+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4899999999999999999998763
No 100
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.33 E-value=0.0023 Score=60.74 Aligned_cols=47 Identities=30% Similarity=0.234 Sum_probs=36.4
Q ss_pred HHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 12 ILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 12 ~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++|+++-....+-.+..+... ....++.+|..|+||||+|+..|+..
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~---~~~~id~~D~~g~TpLhlAV~Lg~~~ 69 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAK---VSLVIDRRDPPGRTPLHLAVRLGHVE 69 (560)
T ss_pred ccchhhhccchhhHHHHHhhh---hhceeccccCCCCccHHHHHHhcCHH
Confidence 499999888766665544432 24578999999999999999999854
No 101
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=95.89 E-value=0.0087 Score=53.07 Aligned_cols=55 Identities=16% Similarity=0.084 Sum_probs=47.2
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
.++..+.||||+|+..|+.++.++|++.+ .-....+.-|.|+-.+||..||.+++
T Consensus 74 ~qhg~~YTpLmFAALSGn~dvcrllldaG-----a~~~~vNsvgrTAaqmAAFVG~H~CV 128 (396)
T KOG1710|consen 74 KQHGTLYTPLMFAALSGNQDVCRLLLDAG-----ARMYLVNSVGRTAAQMAAFVGHHECV 128 (396)
T ss_pred ccccccccHHHHHHHcCCchHHHHHHhcc-----CccccccchhhhHHHHHHHhcchHHH
Confidence 45778999999999999999999999864 34566778899999999999997765
No 102
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=95.73 E-value=0.016 Score=43.00 Aligned_cols=46 Identities=15% Similarity=0.209 Sum_probs=36.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHH
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILH 52 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLH 52 (283)
|+.+|+-|-|||--|+-.||.++|++|++++.+ -...-.+|.+.+.
T Consensus 60 i~~kDKygITPLLsAvwEGH~~cVklLL~~GAd-----rt~~~PdG~~~~e 105 (117)
T KOG4214|consen 60 IQDKDKYGITPLLSAVWEGHRDCVKLLLQNGAD-----RTIHAPDGTALIE 105 (117)
T ss_pred cCCccccCCcHHHHHHHHhhHHHHHHHHHcCcc-----cceeCCCchhHHh
Confidence 578899999999999999999999999997643 3344556665553
No 103
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.34 E-value=0.017 Score=59.01 Aligned_cols=58 Identities=19% Similarity=0.107 Sum_probs=38.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCC-cccccccccCCCCcHHHHHHhcCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLY-VPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~-~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
++.+|.+||||||+|+.+|+.+++..|++-+..+ ..-..+..+-.|.|+--+|..+|+
T Consensus 634 i~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~ 692 (975)
T KOG0520|consen 634 IDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGH 692 (975)
T ss_pred cccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccc
Confidence 4667888888888888888888887776543321 112234455667888877777666
No 104
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=95.11 E-value=0.016 Score=54.61 Aligned_cols=54 Identities=15% Similarity=0.019 Sum_probs=44.4
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
.+++++...+.+|++.|....++.+.-. +.+++.+|.|..|+||.||..|+.+.
T Consensus 501 ~~~~~~~i~~~~aa~~GD~~alrRf~l~-----g~D~~~~DyD~RTaLHvAAaEG~v~v 554 (622)
T KOG0506|consen 501 PRENDTVINVMYAAKNGDLSALRRFALQ-----GMDLETKDYDDRTALHVAAAEGHVEV 554 (622)
T ss_pred cccccchhhhhhhhhcCCHHHHHHHHHh-----cccccccccccchhheeecccCceeH
Confidence 3567788999999999999988766433 35689999999999999999998543
No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.03 E-value=0.36 Score=48.69 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=44.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCC---------------ccccccc----------------ccCCCCcH
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLY---------------VPKWAAR----------------IDENGYTI 50 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~---------------~~~~vn~----------------~D~~GnTp 50 (283)
+|-+|.-|+++||+|+.+.+.++.++|+++.... .+.+++. .-..+-||
T Consensus 55 inc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditP 134 (822)
T KOG3609|consen 55 INCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITP 134 (822)
T ss_pred hhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccH
Confidence 5678899999999999999999999998864110 0011111 12346799
Q ss_pred HHHHHhcCCcccc
Q 041061 51 LHHVADMKHYEYG 63 (283)
Q Consensus 51 LHlAa~~~~~~~~ 63 (283)
|-+||..++++++
T Consensus 135 liLAAh~NnyEil 147 (822)
T KOG3609|consen 135 LMLAAHLNNFEIL 147 (822)
T ss_pred HHHHHHhcchHHH
Confidence 9999999887754
No 106
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=94.86 E-value=0.03 Score=56.22 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=41.3
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhc
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADM 57 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~ 57 (283)
+.|+||||-|..+|+.|++.+|++++ +.+..+|++|-.||.+-.+-
T Consensus 84 ESG~taLHRaiyyG~idca~lLL~~g-----~SL~i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 84 ESGYTALHRAIYYGNIDCASLLLSKG-----RSLRIKDKEGLSPLQFLSRV 129 (1267)
T ss_pred cccchHhhHhhhhchHHHHHHHHhcC-----CceEEecccCCCHHHHHhhc
Confidence 47999999999999999999999874 56889999999999998863
No 107
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=94.85 E-value=0.022 Score=54.78 Aligned_cols=54 Identities=22% Similarity=0.308 Sum_probs=47.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
++..|+.|+|+||-|+-.|+..+.++|++. ++.+...|.+|+||-.-|-+.++.
T Consensus 927 ld~~de~get~lhkaa~~~~r~vc~~lvda-----gasl~ktd~kg~tp~eraqqa~d~ 980 (1004)
T KOG0782|consen 927 LDMADETGETALHKAACQRNRAVCQLLVDA-----GASLRKTDSKGKTPQERAQQAGDP 980 (1004)
T ss_pred HHHHhhhhhHHHHHHHHhcchHHHHHHHhc-----chhheecccCCCChHHHHHhcCCc
Confidence 467789999999999999999999999885 456889999999999999887764
No 108
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=94.81 E-value=0.01 Score=61.23 Aligned_cols=47 Identities=19% Similarity=0.181 Sum_probs=25.9
Q ss_pred CChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 9 GQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 9 G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
=.|+|-.||..||.|++++|+.+ ++.+..+|+.|.+||-+|+-.||.
T Consensus 757 ~~t~LT~acaggh~e~vellv~r-----ganiehrdkkgf~plImaatagh~ 803 (2131)
T KOG4369|consen 757 IKTNLTSACAGGHREEVELLVVR-----GANIEHRDKKGFVPLIMAATAGHI 803 (2131)
T ss_pred ccccccccccCccHHHHHHHHHh-----cccccccccccchhhhhhcccCch
Confidence 34555566666666666665554 233455556666666555555553
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=94.78 E-value=0.0049 Score=62.80 Aligned_cols=24 Identities=29% Similarity=0.166 Sum_probs=20.7
Q ss_pred cccccccCCCCcHHHHHHhcCCcc
Q 041061 38 KWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 38 ~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
..++-+|.+|+||||+|+..|+.+
T Consensus 632 ~ai~i~D~~G~tpL~wAa~~G~e~ 655 (975)
T KOG0520|consen 632 VAIDIRDRNGWTPLHWAAFRGREK 655 (975)
T ss_pred cccccccCCCCcccchHhhcCHHH
Confidence 457899999999999999999754
No 110
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=93.88 E-value=0.032 Score=56.79 Aligned_cols=53 Identities=19% Similarity=0.269 Sum_probs=47.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
+|.+|..|+||||.+...|+......++++ ++..+.-|.+|.+||+.|....+
T Consensus 682 vn~~d~~g~~plh~~~~~g~~~~~~~ll~~-----~a~~~a~~~~~~~~l~~a~~~~~ 734 (785)
T KOG0521|consen 682 VNALDSKGRTPLHHATASGHTSIACLLLKR-----GADPNAFDPDGKLPLDIAMEAAN 734 (785)
T ss_pred chhhhccCCCcchhhhhhcccchhhhhccc-----cccccccCccCcchhhHHhhhcc
Confidence 578899999999999999999999999886 45689999999999999986654
No 111
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=93.51 E-value=0.061 Score=51.03 Aligned_cols=45 Identities=20% Similarity=0.159 Sum_probs=39.1
Q ss_pred cCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHH
Q 041061 6 NQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVA 55 (283)
Q Consensus 6 D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa 55 (283)
|.---|+||+|+.+|..+++.++|+++ .+...+|..|.||..+++
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Leeg-----~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEEG-----CDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHhc-----CCchhcccCCCCcccccc
Confidence 344579999999999999999999874 457899999999999988
No 112
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=93.06 E-value=0.13 Score=49.74 Aligned_cols=75 Identities=20% Similarity=0.163 Sum_probs=49.1
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCcccccc--cccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhccccccc
Q 041061 13 LHVAVRRRRHDIFQFIVEKMPLYVPKWAA--RIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDIAPSHY 90 (283)
Q Consensus 13 LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn--~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~~~~~ 90 (283)
|--|+.......+.+|+.++. ...+| ..|.+|.|+||||+..|+.. +..-+.|+.. +
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~---~~e~~~t~~~~~grt~LHLa~~~gnVv----------l~QLLiWyg~--------d 686 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGS---REEVNETCGEGDGRTALHLAARKGNVV----------LAQLLIWYGV--------D 686 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccC---chhhhccccCCCCcchhhhhhhhcchh----------HHHHHHHhCc--------c
Confidence 445666666777777877653 22344 35778899999999998742 2334567753 2
Q ss_pred ccccccccCCcccccccch
Q 041061 91 TMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 91 ~~~~n~~~G~T~~dl~~~~ 109 (283)
...++. +|.|++-.+++.
T Consensus 687 v~~rda-~g~t~l~yar~a 704 (749)
T KOG0705|consen 687 VMARDA-HGRTALFYARQA 704 (749)
T ss_pred ceeccc-CCchhhhhHhhc
Confidence 345666 899987665443
No 113
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=91.35 E-value=0.2 Score=46.15 Aligned_cols=46 Identities=20% Similarity=0.104 Sum_probs=34.8
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 13 LHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 13 LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
|-.|++.|..+.+++|++. +..+|++|...+.||.+|.-.||..++
T Consensus 40 lceacR~GD~d~v~~LVet-----gvnVN~vD~fD~spL~lAsLcGHe~vv 85 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVET-----GVNVNAVDRFDSSPLYLASLCGHEDVV 85 (516)
T ss_pred HHHHhhcccHHHHHHHHHh-----CCCcchhhcccccHHHHHHHcCcHHHH
Confidence 6678888888888888775 345788888888888888888875543
No 114
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=91.06 E-value=0.11 Score=53.98 Aligned_cols=58 Identities=17% Similarity=0.106 Sum_probs=51.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGI 64 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~ 64 (283)
++.+|++|.|+|-+|+..|+...+..|+++ ..+.+.+|+.-+|++.-|.++||++++.
T Consensus 1020 v~v~NkkG~T~Lwla~~Gg~lss~~il~~~-----~ad~d~qdnr~~S~~maafRKgh~~iVk 1077 (2131)
T KOG4369|consen 1020 VRVPNKKGCTVLWLASAGGALSSCPILVSS-----VADADQQDNRTNSRTMAAFRKGHFAIVK 1077 (2131)
T ss_pred eecccCCCCcccchhccCCccccchHHhhc-----ccChhhhhcccccccHHHHHhchhheec
Confidence 467899999999999999999999999886 4568999999999999999999988763
No 115
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=90.37 E-value=0.38 Score=44.47 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=38.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
+|.+|+-..+||.+|+.+||.+++++|++++. ++..-.-+|.- -|+++-+..
T Consensus 62 VN~vD~fD~spL~lAsLcGHe~vvklLLenGA-----iC~rdtf~G~R-C~YgaLnd~ 113 (516)
T KOG0511|consen 62 VNAVDRFDSSPLYLASLCGHEDVVKLLLENGA-----ICSRDTFDGDR-CHYGALNDR 113 (516)
T ss_pred cchhhcccccHHHHHHHcCcHHHHHHHHHcCC-----cccccccCcch-hhhhhhhHH
Confidence 68899999999999999999999999999854 33333345544 355554443
No 116
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=89.58 E-value=0.2 Score=42.28 Aligned_cols=51 Identities=24% Similarity=0.332 Sum_probs=41.7
Q ss_pred ccCCCChHHHHHHHhCCHHHHHH-HHHhCCCCcccccccccCCCCcHHHHHHh
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQF-IVEKMPLYVPKWAARIDENGYTILHHVAD 56 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~-Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~ 56 (283)
.|.+-++|||-|++-++.+++-+ +++... .....+|..|.+|..+|.+|-.
T Consensus 218 Id~kTe~~LHk~iki~REDVl~LYfie~da-kiP~~LNd~D~nG~~ALdiAL~ 269 (280)
T KOG4591|consen 218 IDGKTENPLHKAIKIEREDVLFLYFIEMDA-KIPGILNDADHNGALALDIALC 269 (280)
T ss_pred HcCCCcchhHHhhhccccceeeehhhhccc-cccccccccCCCchHHHHHHHH
Confidence 47788999999999999999854 555433 3567899999999999999974
No 117
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=86.27 E-value=0.51 Score=39.66 Aligned_cols=25 Identities=24% Similarity=0.040 Sum_probs=21.8
Q ss_pred cccccccCCCCcHHHHHHhcCCccc
Q 041061 38 KWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 38 ~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
..+|.+|..|+|||..|+..|+.+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~ea 27 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEA 27 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhH
Confidence 4589999999999999999887654
No 118
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.41 E-value=13 Score=26.85 Aligned_cols=50 Identities=14% Similarity=0.032 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 041061 165 YLFTITDVASLSLSLSSAVMFLSILTSPRESSDFLDHLPRKLKIGFMLLFLSVLASMITFSASILLVAR 233 (283)
Q Consensus 165 ~~F~~~nt~a~~~S~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~s~~~m~~af~~~~~~~~~ 233 (283)
.+++++|..||..|.+.+.+ +++..|...+ . + +..+|.+.|.+|+...+.
T Consensus 14 pawi~f~waafg~s~~m~~~--gi~~lPVD~w-----~-K-----------Gy~~MG~lfltgSt~tL~ 63 (95)
T COG4298 14 PAWIMFNWAAFGASYFMLGL--GIWLLPVDLW-----T-K-----------GYWAMGILFLTGSTVTLV 63 (95)
T ss_pred chhHhHHHHHHHHHHHHHHH--HhheechHHH-----H-H-----------HHHHHHHHHHhcchhhhh
Confidence 45677888999999876543 6665554221 1 1 334567778888766664
No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=66.01 E-value=7.5 Score=37.42 Aligned_cols=40 Identities=18% Similarity=0.018 Sum_probs=22.2
Q ss_pred HHHHHHHHHhCCC-CcccccccccCCCCcHHHHHHhcCCcc
Q 041061 22 HDIFQFIVEKMPL-YVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 22 ~~iv~~Ll~~~~~-~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++-+++|.++... ++.--....|.---|+||+|+..|..+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k 444 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARK 444 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHH
Confidence 4555666544321 011112234555689999999888643
No 120
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=43.77 E-value=1.3e+02 Score=25.15 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=21.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH-HHhcCCC
Q 041061 164 FYLFTITDVASLSLSLSSAVMFL-SILTSPR 193 (283)
Q Consensus 164 f~~F~~~nt~a~~~S~~~~~~~~-~~~~~~~ 193 (283)
=.-|.++|.+|..+.+.++..-+ .|..|++
T Consensus 37 ~~eY~vsNiisv~Sgll~I~~GI~AIvlSrn 67 (188)
T PF12304_consen 37 TLEYAVSNIISVTSGLLSIICGIVAIVLSRN 67 (188)
T ss_pred eehhhHHHHHHHHHHHHHHHHhHHHHhhhcc
Confidence 35678999999999888876644 4556654
No 121
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=43.21 E-value=2e+02 Score=24.23 Aligned_cols=10 Identities=50% Similarity=0.614 Sum_probs=8.0
Q ss_pred cCCccccccc
Q 041061 98 KNMTAGDLFN 107 (283)
Q Consensus 98 ~G~T~~dl~~ 107 (283)
+|+|++|+|-
T Consensus 44 ~G~tA~~lfG 53 (206)
T PF06570_consen 44 KGKTARQLFG 53 (206)
T ss_pred CCCcHHHHcC
Confidence 7888888876
No 122
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.19 E-value=2e+02 Score=23.89 Aligned_cols=29 Identities=17% Similarity=0.195 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 041061 241 ALYAAAILPVILLALIALPLYGNFEKGLN 269 (283)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (283)
+..++.++.++-|.+.++|.=.+-...+.
T Consensus 139 lf~ilq~laliwYslSyiP~g~~gv~~~~ 167 (175)
T KOG2887|consen 139 LFCILQVLALIWYSLSYIPFGRSGVSKLS 167 (175)
T ss_pred HHHHHHHHHHHHHHHHhCcchhhHHHHHH
Confidence 45556666677888888887544444333
No 123
>PF11286 DUF3087: Protein of unknown function (DUF3087); InterPro: IPR021438 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=40.92 E-value=2.1e+02 Score=23.63 Aligned_cols=58 Identities=12% Similarity=0.153 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCchHH--HHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 041061 212 LLFLSVLASMITFSASILLVARL----GERWTV--ALYAAAILPVILLALIALPLYGNFEKGLN 269 (283)
Q Consensus 212 ~l~~s~~~m~~af~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (283)
.+..++.....+|.++....+|. +.+|-. ++.++...-.++.-+-.-|++.+..|.|.
T Consensus 21 ~~v~~lai~sl~~s~llI~lFg~~~~~nf~~NllGVil~~~~~~~~l~~~k~~p~m~Ev~YvW~ 84 (165)
T PF11286_consen 21 ACVASLAILSLAFSQLLIALFGGESGGNFHWNLLGVILGLLLTSALLRQLKTHPFMTEVYYVWQ 84 (165)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCceeeeHHHHHHHHHHHHHHHHHHccChHHHHHHHHHH
Confidence 34445555667787877777765 335644 33333332222334555577777766553
No 124
>PRK07668 hypothetical protein; Validated
Probab=38.83 E-value=2.8e+02 Score=24.57 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=25.3
Q ss_pred cCCcccccccchhhhhHHhhHh-HHhhh-ccchhHHHHHHHHHHhhhh
Q 041061 98 KNMTAGDLFNRTHEDQLKKAQD-WIKET-SESCSILSILIATFVFAAA 143 (283)
Q Consensus 98 ~G~T~~dl~~~~~~~~~~~~~~-~lk~t-~~~~~vva~LIATvtFaA~ 143 (283)
+|+|++|++.+.-++..+|..+ ..++. .+-..+..+.++.++|-+-
T Consensus 44 ~GkTA~~IfG~sPk~yA~EL~~~~~~~~~~~~~~l~~~ii~~l~~~~i 91 (254)
T PRK07668 44 DGKTVEDIFGDSPKEYANELVKEMEVDRKENIKLILFIIIGILSFWII 91 (254)
T ss_pred cCCcHHHHhCCCHHHHHHHHhcccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 7899999987654443333222 11111 2333456677777766664
No 125
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=38.51 E-value=25 Score=36.08 Aligned_cols=55 Identities=16% Similarity=0.087 Sum_probs=44.3
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
..+.--.-.|+++|+.-.|+-.++.... ..-.+|.+|--|.++||+|..+.+.+.
T Consensus 23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~-~~lninc~d~lGr~al~iai~nenle~ 77 (822)
T KOG3609|consen 23 NEGEKGFLLAHENGDVPLVAKALEYKAV-SKLNINCRDPLGRLALHIAIDNENLEL 77 (822)
T ss_pred chhhHHHHHHHHcCChHHHHHHHHhccc-cccchhccChHhhhceecccccccHHH
Confidence 4556667889999999999988886553 334689999999999999998887654
No 126
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=33.40 E-value=4e+02 Score=24.75 Aligned_cols=66 Identities=15% Similarity=0.230 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhhHH-------HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041061 167 FTITDVASLSLSLSSAVMFLSILTSPRESSDFLDHLPRKL-------KIGFMLLFLSVLASMITFSASILLVA 232 (283)
Q Consensus 167 F~~~nt~a~~~S~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------~~~~~~l~~s~~~m~~af~~~~~~~~ 232 (283)
+.+.|..+......+.++-+..+..++..+++...+.++. .+.+..-.+|+..++++...|...+.
T Consensus 176 ~~l~~~~~~a~~~i~~~iG~yll~kGfgld~~~~~~~~~~~~~l~~g~it~ityvva~~l~iig~i~g~~~~~ 248 (344)
T PF04123_consen 176 LALLGYPAYALGIILLLIGLYLLYKGFGLDDYLREWLERFRESLYEGRITFITYVVALLLIIIGIIYGYLTLW 248 (344)
T ss_pred HHHHcchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhccccccceeehHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444433333334555666666555555555 44455555566666666666655444
No 127
>COG1914 MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]
Probab=32.91 E-value=4.4e+02 Score=25.12 Aligned_cols=26 Identities=38% Similarity=0.404 Sum_probs=13.5
Q ss_pred CccccCCCcchhhHHHHHHHHHHHHHHHHH
Q 041061 154 GFPNFLDSPMFYLFTITDVASLSLSLSSAV 183 (283)
Q Consensus 154 G~~~l~~~~~f~~F~~~nt~a~~~S~~~~~ 183 (283)
..|.+. +.++.+|.+. .+.+++++++
T Consensus 278 l~~~~G-~~~~~lF~v~---llasg~~s~~ 303 (416)
T COG1914 278 LAPLLG-SAAFVLFGVA---LLAAGLSSTV 303 (416)
T ss_pred hhhhhh-hHHHHHHHHH---HHHhHHHHHH
Confidence 344444 6667777665 3444444443
No 128
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.12 E-value=1e+02 Score=22.89 Aligned_cols=46 Identities=20% Similarity=0.296 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhHHH
Q 041061 211 MLLFLSVLASMITFSASILLVARLGERWTVALYAAAILPVILLALIALPLYGN 263 (283)
Q Consensus 211 ~~l~~s~~~m~~af~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (283)
++++.++.+.+..|.+- ..+|...++...|.-.++..+-.+|+|+.
T Consensus 31 ilti~aiVg~i~Gf~~Q-------qls~tvy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 31 ILTIGAIVGFIYGFAQQ-------QLSVTVYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCCchhhhc
Confidence 45555655555555443 34666666666666555666777787764
No 129
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=28.58 E-value=2.6e+02 Score=21.51 Aligned_cols=51 Identities=12% Similarity=0.233 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCchHH-HHHHHHHHHHHHHHH
Q 041061 205 KLKIGFMLLFLSVLASMITFSASI-LLVARLGERWTV-ALYAAAILPVILLAL 255 (283)
Q Consensus 205 ~l~~~~~~l~~s~~~m~~af~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 255 (283)
.+.+|..++.++...++++..... .+--.....|.. ++.+++++|-.....
T Consensus 43 ~I~la~~Lli~G~~li~~g~l~~~~~i~~~~~~~~~llilG~L~fIPG~Y~~~ 95 (115)
T PF05915_consen 43 SIALAVFLLIFGTVLIIIGLLLFFGHIDGDRDRGWALLILGILCFIPGFYHTR 95 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHHHHHHHHHhccHHHHH
Confidence 344555555555444443322211 111112234554 667777777544443
No 130
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=26.61 E-value=5.8e+02 Score=25.04 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchHH-HHHHHHHHHHHHHHHHHHHhHHHHH
Q 041061 211 MLLFLSVLASMITFSASILLVARLGERWTV-ALYAAAILPVILLALIALPLYGNFE 265 (283)
Q Consensus 211 ~~l~~s~~~m~~af~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (283)
.++.+|+.+.+=++.+-.+++......-.- +.++.+|.-+++|.+..++.+.++.
T Consensus 330 Sf~~i~mqa~mD~~Lall~lta~~vve~lylpfvtaAF~~fV~~siFemRYLlsI~ 385 (636)
T KOG0828|consen 330 SFLTIAMQAGMDAYLALLFLTANAVVESLYLPFVTAAFFKFVVFSIFEMRYLLSIW 385 (636)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 377888888888888888877642222122 4556666666677777777666643
No 131
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=26.13 E-value=2.1e+02 Score=19.24 Aligned_cols=21 Identities=24% Similarity=0.301 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 041061 213 LFLSVLASMITFSASILLVAR 233 (283)
Q Consensus 213 l~~s~~~m~~af~~~~~~~~~ 233 (283)
||+|..+|..=|.+.....+.
T Consensus 2 MWiS~~~iglMfisv~~i~~s 22 (58)
T PF10966_consen 2 MWISFGAIGLMFISVILIYFS 22 (58)
T ss_pred cchHHHHHHHHHHHHHHHHHH
Confidence 567777777777666555553
No 132
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=25.79 E-value=3.1e+02 Score=21.08 Aligned_cols=17 Identities=18% Similarity=0.491 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 041061 207 KIGFMLLFLSVLASMIT 223 (283)
Q Consensus 207 ~~~~~~l~~s~~~m~~a 223 (283)
.||+.++++++.-|.+.
T Consensus 13 ~~al~lif~g~~vmy~g 29 (114)
T PF11023_consen 13 TFALSLIFIGMIVMYIG 29 (114)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 36777777777777654
No 133
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=23.82 E-value=5.5e+02 Score=25.14 Aligned_cols=45 Identities=13% Similarity=0.440 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHH-HHHHHHHHHHHHHHHH
Q 041061 212 LLFLSVLASMITFSASILLVARLGERWTV-ALYAAAILPVILLALI 256 (283)
Q Consensus 212 ~l~~s~~~m~~af~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 256 (283)
++...+.+.+.+|.++-....=...+|.. .+.....+|..+|.+.
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~~lt~~~~P~~~~~~~ 348 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGKKWKKNSILTSLLFPGILFSIF 348 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCCceeehhhHHHHHHHHHHHHHH
Confidence 45556677777886655444434568876 6667777776555443
No 134
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=23.30 E-value=5.1e+02 Score=23.43 Aligned_cols=19 Identities=32% Similarity=0.473 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 041061 213 LFLSVLASMITFSASILLV 231 (283)
Q Consensus 213 l~~s~~~m~~af~~~~~~~ 231 (283)
.++++...++++..+++.+
T Consensus 235 ~~~g~~~~~~~~~~~~~~~ 253 (325)
T PRK10714 235 SLLGSIIAIGGFSLAVLLV 253 (325)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555544
No 135
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=23.11 E-value=8.4e+02 Score=25.13 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=18.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Q 041061 164 FYLFTITDVASLSLSLSSAVMFLSIL 189 (283)
Q Consensus 164 f~~F~~~nt~a~~~S~~~~~~~~~~~ 189 (283)
-.-|++-|++-+++.++++..++.+-
T Consensus 167 ~sr~ILLDs~Llff~~~~~y~~~r~~ 192 (723)
T KOG3359|consen 167 LSRFILLDSMLLFFMAAAVYCFVRFY 192 (723)
T ss_pred hhhHHHHhHHHHHHHHHHHHHHHHHH
Confidence 45688889998888877776655443
No 136
>PF04148 Erv26: Transmembrane adaptor Erv26; InterPro: IPR007277 Erv26 is an integral membrane protein that is packed into COPII vesicles and cycles between the ER and Golgi compartments. It directs pro-alkaline phosphatase into endoplasmic reticulum-derived COPII transport vesicles [].
Probab=22.64 E-value=3.3e+02 Score=23.44 Aligned_cols=60 Identities=13% Similarity=0.229 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh---cCCC----chHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 041061 210 FMLLFLSVLASMITFSASILLVA---RLGE----RWTV-ALYAAAILPVILLALIALPLYGNFEKGLN 269 (283)
Q Consensus 210 ~~~l~~s~~~m~~af~~~~~~~~---~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (283)
.....+....+.++.++|+|-.. .++. +... .|+....+-++++..=.+|++..+..-..
T Consensus 9 ~~g~~~~~~f~tlsiAsGLyYlsElVEEht~~akril~~~I~~ii~~~vlL~~~D~~P~~~~l~si~s 76 (211)
T PF04148_consen 9 YLGTVLGFVFLTLSIASGLYYLSELVEEHTVLAKRILKRLIYFIIALHVLLLLFDGFPFWLTLFSIFS 76 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 33455666677777888887754 1121 2222 56666666666667777887665544433
No 137
>PLN03211 ABC transporter G-25; Provisional
Probab=21.55 E-value=8.2e+02 Score=24.77 Aligned_cols=26 Identities=12% Similarity=0.285 Sum_probs=13.6
Q ss_pred chhhHHHHHHHHHH-HHHHHHHHHHHH
Q 041061 163 MFYLFTITDVASLS-LSLSSAVMFLSI 188 (283)
Q Consensus 163 ~f~~F~~~nt~a~~-~S~~~~~~~~~~ 188 (283)
.-..|.++.+++-. ..+...++|..+
T Consensus 478 ~~~~Y~la~~l~elP~~~~~~~if~~i 504 (659)
T PLN03211 478 TLSSYFMARIVGDLPMELILPTIFLTV 504 (659)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45567777777754 333333344444
No 138
>PF10661 EssA: WXG100 protein secretion system (Wss), protein EssA; InterPro: IPR018920 The Wss (WXG100 protein secretion system) in Staphylococcus aureus seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) []. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus in conjunction with YukC and YukAB. Proteins homologous to EssA, YukC, EsaA and YukD were absent from mycobacteria []. Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This highly divergent protein family consists largely of a central region of highly polar low-complexity sequence containing occasional LF motifs in weak repeats about 17 residues in length, flanked by hydrophobic N- and C-terminal regions.
Probab=21.21 E-value=1.2e+02 Score=24.41 Aligned_cols=23 Identities=22% Similarity=0.377 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q 041061 212 LLFLSVLASMITFSASILLVARL 234 (283)
Q Consensus 212 ~l~~s~~~m~~af~~~~~~~~~~ 234 (283)
.+++++++++++.+.|+|.+++.
T Consensus 120 ~i~~~i~g~ll~i~~giy~~~r~ 142 (145)
T PF10661_consen 120 TILLSIGGILLAICGGIYVVLRK 142 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788899999999999864
No 139
>PF15312 JSRP: Junctional sarcoplasmic reticulum protein
Probab=20.89 E-value=63 Score=22.25 Aligned_cols=23 Identities=30% Similarity=0.472 Sum_probs=16.1
Q ss_pred HHhhhccchhHHHHHHH--HHHhhh
Q 041061 120 WIKETSESCSILSILIA--TFVFAA 142 (283)
Q Consensus 120 ~lk~t~~~~~vva~LIA--TvtFaA 142 (283)
|-.-+-|-|+++|.+|| +.+||-
T Consensus 6 W~~lTLNkCLvlAslValL~s~fq~ 30 (65)
T PF15312_consen 6 WGDLTLNKCLVLASLVALLGSGFQL 30 (65)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHH
Confidence 33446678999999998 455553
No 140
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=20.65 E-value=6.9e+02 Score=23.22 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=10.5
Q ss_pred hHHHHHHHHHHhhhhccCC
Q 041061 129 SILSILIATFVFAAAYTVP 147 (283)
Q Consensus 129 ~vva~LIATvtFaA~~t~P 147 (283)
.++|++.+.++...--..|
T Consensus 13 ~~~av~la~~~~~ld~~~~ 31 (371)
T PF10011_consen 13 AVLAVVLAFLTPYLDRLLP 31 (371)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 4455555555555555555
No 141
>PF03669 UPF0139: Uncharacterised protein family (UPF0139); InterPro: IPR005351 This is a small family of proteins of unknown function which appear to be related to the hypothetical protein CG10674 from Drosophila melanogaster (Fruit fly)(Q9VRJ8 from SWISSPROT).
Probab=20.34 E-value=3.8e+02 Score=20.13 Aligned_cols=15 Identities=7% Similarity=0.188 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHH
Q 041061 169 ITDVASLSLSLSSAV 183 (283)
Q Consensus 169 ~~nt~a~~~S~~~~~ 183 (283)
+.+++|+++++.+++
T Consensus 34 y~~~L~~~~~m~gl~ 48 (103)
T PF03669_consen 34 YMSFLGMIFSMAGLM 48 (103)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345566666665543
No 142
>PRK12585 putative monovalent cation/H+ antiporter subunit G; Reviewed
Probab=20.19 E-value=4.9e+02 Score=22.05 Aligned_cols=10 Identities=10% Similarity=0.016 Sum_probs=5.9
Q ss_pred Cccchhhhhh
Q 041061 193 RESSDFLDHL 202 (283)
Q Consensus 193 ~~~~~~~~~l 202 (283)
.++.|++.++
T Consensus 28 lRfPD~YtRL 37 (197)
T PRK12585 28 IRLPDVYTRT 37 (197)
T ss_pred HhcCcHHHHh
Confidence 3566776544
No 143
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=20.02 E-value=1.1e+02 Score=21.17 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=27.7
Q ss_pred ChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 10 QTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 10 ~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
...+..|+..|+.||++.+++... .| +..+..|...-+
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~~---------~~---~~~l~~AI~~H~ 44 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKNK---------PD---NDCLEYAIKSHN 44 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhc---------cH---HHHHHHHHHHhh
Confidence 467899999999999999976422 11 455778876544
Done!