Query 041061
Match_columns 283
No_of_seqs 247 out of 2271
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 05:07:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.4 1.2E-13 4.1E-18 113.3 6.1 102 2-109 30-146 (169)
2 3aaa_C Myotrophin, protein V-1 99.4 4.1E-13 1.4E-17 103.2 6.1 80 3-107 34-114 (123)
3 3c5r_A BARD-1, BRCA1-associate 99.4 5.2E-13 1.8E-17 104.5 6.5 100 4-109 5-119 (137)
4 3twr_A Tankyrase-2; ankyrin re 99.4 1.4E-12 4.9E-17 105.0 7.9 103 3-111 36-153 (165)
5 1n0q_A 3ANK, 3 ankyrin repeats 99.3 7.9E-13 2.7E-17 96.7 5.3 77 8-109 1-78 (93)
6 4b93_B Ankyrin repeat domain-c 99.3 1.3E-12 4.5E-17 114.8 6.7 99 5-109 115-228 (269)
7 3f6q_A Integrin-linked protein 99.3 2.4E-12 8.1E-17 105.3 7.8 103 2-110 32-149 (179)
8 1bd8_A P19INK4D CDK4/6 inhibit 99.3 1.3E-12 4.4E-17 104.1 5.6 100 3-109 30-143 (156)
9 1n0q_A 3ANK, 3 ankyrin repeats 99.3 3.3E-12 1.1E-16 93.3 5.6 55 2-61 28-82 (93)
10 2jab_A H10-2-G3; HER2, darpin, 99.3 4E-12 1.4E-16 99.5 6.0 82 3-109 41-123 (136)
11 3deo_A Signal recognition part 99.3 4.3E-12 1.5E-16 104.5 5.4 82 3-109 70-153 (183)
12 3v31_A Ankyrin repeat family A 99.3 9E-12 3.1E-16 100.4 7.2 102 2-109 29-145 (167)
13 3v30_A DNA-binding protein rfx 99.2 6E-12 2.1E-16 102.0 6.1 102 2-109 29-145 (172)
14 1d9s_A Cyclin-dependent kinase 99.2 4E-12 1.4E-16 99.5 4.5 101 2-109 5-121 (136)
15 1oy3_D Transcription factor in 99.2 5.7E-12 1.9E-16 109.4 5.8 104 2-111 151-270 (282)
16 2y1l_E Darpin-8.4; hydrolase-i 99.2 8.7E-12 3E-16 101.1 6.1 102 2-109 40-156 (169)
17 2dzn_A Probable 26S proteasome 99.2 1.4E-11 4.9E-16 103.8 7.7 100 3-108 101-217 (228)
18 1ihb_A P18-INK4C(INK6), cyclin 99.2 8.3E-12 2.9E-16 99.9 5.9 100 3-109 32-147 (162)
19 1awc_B Protein (GA binding pro 99.2 8.9E-12 3.1E-16 99.2 5.9 99 5-109 30-143 (153)
20 1dcq_A PYK2-associated protein 99.2 8.2E-12 2.8E-16 110.3 6.2 83 2-109 162-248 (278)
21 2zgd_A 3 repeat synthetic anky 99.2 6.6E-12 2.2E-16 94.9 4.7 82 3-109 18-100 (110)
22 2rfm_A Putative ankyrin repeat 99.2 1.6E-11 5.5E-16 101.3 7.1 54 3-61 29-82 (192)
23 3t8k_A Uncharacterized protein 99.2 1.1E-11 3.7E-16 103.1 5.9 102 3-110 31-165 (186)
24 2l6b_A NR1C; ankyrin, consensu 99.2 1.3E-11 4.6E-16 93.4 5.6 81 4-109 4-85 (115)
25 1s70_B 130 kDa myosin-binding 99.2 3.3E-11 1.1E-15 105.9 8.4 85 5-114 195-280 (299)
26 4gpm_A Engineered protein OR26 99.2 1.6E-11 5.4E-16 100.6 5.7 92 11-108 6-112 (169)
27 3utm_A Tankyrase-1; tankyrase, 99.2 1.6E-11 5.3E-16 109.7 6.2 88 3-115 241-329 (351)
28 4hbd_A KN motif and ankyrin re 99.2 1.7E-11 5.9E-16 107.7 6.2 82 3-109 177-260 (276)
29 3ehr_A Osteoclast-stimulating 99.2 1.4E-11 5E-16 104.1 5.3 101 3-109 67-183 (222)
30 1ycs_B 53BP2, P53BP2; ankyrin 99.2 2E-11 7E-16 104.7 6.0 52 3-59 64-115 (239)
31 3ui2_A Signal recognition part 99.2 1.9E-11 6.6E-16 105.5 5.8 82 2-108 70-153 (244)
32 2vge_A RELA-associated inhibit 99.2 5.8E-11 2E-15 101.7 8.7 97 5-106 17-128 (229)
33 3b7b_A Euchromatic histone-lys 99.2 4.6E-11 1.6E-15 101.4 7.8 102 3-110 105-221 (237)
34 3aji_A 26S proteasome non-ATPa 99.2 3.6E-11 1.2E-15 101.6 6.4 54 3-61 67-120 (231)
35 1yyh_A HN1;, notch 1, ankyrin 99.1 2.4E-11 8.1E-16 104.9 5.2 53 3-59 84-136 (253)
36 2rfm_A Putative ankyrin repeat 99.1 2.1E-11 7.1E-16 100.7 4.5 101 2-108 61-176 (192)
37 2rfa_A Transient receptor pote 99.1 3.8E-11 1.3E-15 101.7 6.2 106 2-108 30-163 (232)
38 3hra_A Ankyrin repeat family p 99.1 2.9E-11 9.9E-16 100.0 5.3 100 2-107 32-148 (201)
39 1sw6_A Regulatory protein SWI6 99.1 2.6E-11 8.8E-16 109.1 5.3 53 2-59 123-176 (327)
40 1k1a_A B-cell lymphoma 3-encod 99.1 2.9E-11 9.9E-16 102.6 5.0 105 1-107 1-124 (241)
41 3v30_A DNA-binding protein rfx 99.1 3.5E-11 1.2E-15 97.4 5.2 79 2-85 62-154 (172)
42 1bi7_B P16INK4A, MTS1, multipl 99.1 6.1E-11 2.1E-15 94.8 6.4 95 3-104 39-149 (156)
43 1n0r_A 4ANK, 4 ankyrin repeats 99.1 5.2E-11 1.8E-15 90.6 5.7 96 8-109 1-111 (126)
44 1oy3_D Transcription factor in 99.1 4.1E-11 1.4E-15 104.0 5.7 59 1-61 1-59 (282)
45 2rfa_A Transient receptor pote 99.1 4.2E-11 1.4E-15 101.4 5.5 53 4-61 116-168 (232)
46 2zgd_A 3 repeat synthetic anky 99.1 5.2E-11 1.8E-15 89.9 5.4 55 2-61 50-104 (110)
47 1k1a_A B-cell lymphoma 3-encod 99.1 1E-10 3.4E-15 99.3 7.7 101 3-109 110-226 (241)
48 2f8y_A Notch homolog 1, transl 99.1 9.1E-11 3.1E-15 98.6 6.4 54 3-60 52-105 (223)
49 1ikn_D Protein (I-kappa-B-alph 99.1 1.6E-10 5.4E-15 98.3 7.9 107 2-109 71-194 (236)
50 2xai_A ASB-9, ankyrin repeat a 99.1 6.5E-11 2.2E-15 102.7 5.5 101 2-108 29-143 (261)
51 2l6b_A NR1C; ankyrin, consensu 99.1 4.7E-11 1.6E-15 90.3 3.8 54 2-60 35-88 (115)
52 2xai_A ASB-9, ankyrin repeat a 99.1 1.4E-10 4.7E-15 100.6 6.8 95 8-108 100-208 (261)
53 3d9h_A CDNA FLJ77766, highly s 99.1 9.9E-11 3.4E-15 103.1 5.8 99 3-107 53-165 (285)
54 1n11_A Ankyrin; clathrin, BAND 99.1 1.6E-10 5.3E-15 107.3 6.8 101 3-109 272-387 (437)
55 2etb_A Transient receptor pote 99.1 1.3E-10 4.4E-15 100.1 5.7 80 4-108 85-181 (256)
56 3jxi_A Vanilloid receptor-rela 99.1 9.3E-11 3.2E-15 101.1 4.8 81 3-108 87-185 (260)
57 3aji_A 26S proteasome non-ATPa 99.0 1.7E-10 5.7E-15 97.5 5.9 101 2-108 33-148 (231)
58 3hra_A Ankyrin repeat family p 99.0 1.5E-10 5.1E-15 95.7 5.5 103 2-109 65-188 (201)
59 2b0o_E UPLC1; arfgap, structur 99.0 1.3E-10 4.4E-15 103.8 5.3 80 5-109 186-269 (301)
60 3c5r_A BARD-1, BRCA1-associate 99.0 1.5E-10 5.2E-15 90.2 5.2 56 2-62 36-91 (137)
61 3aaa_C Myotrophin, protein V-1 99.0 1.6E-10 5.6E-15 88.5 5.0 79 5-108 3-82 (123)
62 1sw6_A Regulatory protein SWI6 99.0 1.8E-10 6.2E-15 103.6 6.1 87 2-108 194-325 (327)
63 3ehr_A Osteoclast-stimulating 99.0 8.5E-11 2.9E-15 99.3 3.7 56 2-61 99-154 (222)
64 3ljn_A Hypothetical protein; a 99.0 1.7E-10 5.7E-15 104.6 5.9 101 3-109 132-254 (364)
65 1awc_B Protein (GA binding pro 99.0 1.8E-10 6.2E-15 91.5 5.3 94 8-108 1-109 (153)
66 3utm_A Tankyrase-1; tankyrase, 99.0 2E-10 6.7E-15 102.5 6.0 101 2-108 51-166 (351)
67 1bi7_B P16INK4A, MTS1, multipl 99.0 5.9E-11 2E-15 94.9 2.4 100 3-109 6-121 (156)
68 3b7b_A Euchromatic histone-lys 99.0 2.2E-10 7.5E-15 97.1 6.0 100 2-107 4-119 (237)
69 1yyh_A HN1;, notch 1, ankyrin 99.0 2E-10 6.8E-15 99.0 5.8 100 3-108 51-166 (253)
70 3d9h_A CDNA FLJ77766, highly s 99.0 1.6E-10 5.5E-15 101.8 5.3 102 2-109 85-200 (285)
71 2etb_A Transient receptor pote 99.0 1.4E-10 4.9E-15 99.8 4.7 49 8-58 135-183 (256)
72 3lvq_E ARF-GAP with SH3 domain 99.0 1.7E-10 5.8E-15 109.8 5.7 52 6-62 168-222 (497)
73 2pnn_A Transient receptor pote 99.0 2E-10 7E-15 99.9 5.7 79 5-108 97-193 (273)
74 4b93_B Ankyrin repeat domain-c 99.0 1.6E-10 5.6E-15 101.3 5.1 100 2-107 79-193 (269)
75 1s70_B 130 kDa myosin-binding 99.0 2.4E-10 8.3E-15 100.3 6.2 96 8-109 39-149 (299)
76 2jab_A H10-2-G3; HER2, darpin, 99.0 2.5E-10 8.6E-15 89.1 5.6 55 2-61 73-127 (136)
77 3t8k_A Uncharacterized protein 99.0 9.2E-11 3.2E-15 97.4 3.2 93 8-108 5-124 (186)
78 1d9s_A Cyclin-dependent kinase 99.0 2.4E-10 8.3E-15 89.2 5.4 55 2-62 38-93 (136)
79 3jxi_A Vanilloid receptor-rela 99.0 1.7E-10 5.8E-15 99.5 4.9 51 7-59 138-188 (260)
80 1dcq_A PYK2-associated protein 99.0 2.3E-10 8E-15 100.9 5.6 55 2-61 198-252 (278)
81 4hbd_A KN motif and ankyrin re 99.0 1.4E-10 4.9E-15 101.8 3.6 102 2-108 104-225 (276)
82 2dzn_A Probable 26S proteasome 99.0 3.4E-10 1.2E-14 95.2 5.6 56 4-62 31-87 (228)
83 2b0o_E UPLC1; arfgap, structur 99.0 3.1E-10 1.1E-14 101.3 5.6 54 2-60 219-272 (301)
84 2y1l_E Darpin-8.4; hydrolase-i 99.0 4.7E-10 1.6E-14 90.7 6.2 57 2-63 73-129 (169)
85 1bd8_A P19INK4D CDK4/6 inhibit 99.0 2.8E-10 9.6E-15 90.4 4.4 95 8-108 1-110 (156)
86 3f6q_A Integrin-linked protein 99.0 4E-10 1.4E-14 91.9 5.4 57 2-63 65-121 (179)
87 3jue_A Arfgap with coiled-coil 99.0 3.9E-10 1.4E-14 103.6 5.9 82 3-109 227-311 (368)
88 1ikn_D Protein (I-kappa-B-alph 99.0 4.5E-10 1.6E-14 95.4 5.9 101 2-108 110-228 (236)
89 3twr_A Tankyrase-2; ankyrin re 99.0 4.7E-10 1.6E-14 90.0 5.6 56 2-62 68-123 (165)
90 2pnn_A Transient receptor pote 99.0 3.2E-10 1.1E-14 98.6 4.8 51 7-59 146-196 (273)
91 3v31_A Ankyrin repeat family A 99.0 6.5E-10 2.2E-14 89.4 6.2 57 2-63 62-118 (167)
92 3kea_A K1L; tropism, ANK repea 99.0 2.4E-10 8.2E-15 100.7 3.5 52 4-60 90-142 (285)
93 2fo1_E LIN-12 protein; beta-ba 99.0 8.7E-10 3E-14 100.8 7.2 82 2-108 159-244 (373)
94 1ihb_A P18-INK4C(INK6), cyclin 98.9 7.5E-10 2.6E-14 88.3 5.8 78 2-84 63-155 (162)
95 3kea_A K1L; tropism, ANK repea 98.9 4.9E-10 1.7E-14 98.7 5.1 99 2-108 24-138 (285)
96 2f8y_A Notch homolog 1, transl 98.9 7.6E-10 2.6E-14 92.9 6.1 103 2-110 85-202 (223)
97 2fo1_E LIN-12 protein; beta-ba 98.9 4.2E-10 1.4E-14 102.9 4.7 82 4-109 274-356 (373)
98 3deo_A Signal recognition part 98.9 1.1E-09 3.7E-14 89.9 6.7 54 2-60 102-156 (183)
99 3ljn_A Hypothetical protein; a 98.9 2.8E-10 9.6E-15 103.1 3.4 78 3-85 14-103 (364)
100 1n0r_A 4ANK, 4 ankyrin repeats 98.9 9.3E-10 3.2E-14 83.6 5.6 77 2-83 28-118 (126)
101 4g8k_A 2-5A-dependent ribonucl 98.9 6.9E-10 2.4E-14 99.5 5.1 57 2-62 232-288 (337)
102 1n11_A Ankyrin; clathrin, BAND 98.9 8.2E-10 2.8E-14 102.4 5.7 54 3-61 8-61 (437)
103 1wdy_A 2-5A-dependent ribonucl 98.9 1.5E-09 5E-14 93.8 6.0 101 4-109 143-263 (285)
104 3jue_A Arfgap with coiled-coil 98.9 1.3E-09 4.3E-14 100.2 5.8 55 2-61 261-315 (368)
105 2vge_A RELA-associated inhibit 98.9 1.5E-09 5.2E-14 92.7 4.8 55 2-61 47-101 (229)
106 3eu9_A Huntingtin-interacting 98.9 3.2E-09 1.1E-13 89.4 6.7 101 3-109 103-220 (240)
107 3lvq_E ARF-GAP with SH3 domain 98.9 1.4E-09 4.7E-14 103.5 4.8 57 2-63 200-256 (497)
108 1wdy_A 2-5A-dependent ribonucl 98.8 2.5E-09 8.5E-14 92.3 6.0 53 6-63 36-88 (285)
109 3ui2_A Signal recognition part 98.8 6.9E-09 2.4E-13 89.3 7.2 70 3-80 104-174 (244)
110 4g8k_A 2-5A-dependent ribonucl 98.8 5.9E-09 2E-13 93.3 5.8 101 4-109 163-283 (337)
111 1ycs_B 53BP2, P53BP2; ankyrin 98.8 1.3E-08 4.4E-13 87.1 7.5 55 2-61 96-153 (239)
112 3eu9_A Huntingtin-interacting 98.7 5.6E-09 1.9E-13 87.9 4.5 101 2-108 2-118 (240)
113 2aja_A Ankyrin repeat family p 98.4 2E-08 6.9E-13 92.4 -2.3 100 5-107 88-206 (376)
114 2aja_A Ankyrin repeat family p 98.1 3E-07 1E-11 84.5 0.2 58 3-63 122-179 (376)
115 4dve_A Biotin transporter BIOY 30.5 1.5E+02 0.005 24.0 6.9 21 129-149 24-44 (198)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.43 E-value=1.2e-13 Score=113.33 Aligned_cols=102 Identities=23% Similarity=0.214 Sum_probs=60.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+..++.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.+.. ..
T Consensus 30 vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g-----ad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~ 104 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAENGHKEVVKLLISKG-----ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGR 104 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-----cchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCC
Confidence 3456666666666666666666666666542 3466666666666666666665443210 12
Q ss_pred ChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 68 PVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
+++..+...+..+.++.++.. ...+.+|+ +|+||.+++.+.
T Consensus 105 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~-~G~TpL~~A~~~ 146 (169)
T 4gpm_A 105 TPLHHAAENGHKEVVKLLISKGADVNTSDS-DGRTPLDLAREH 146 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHHHHHHc
Confidence 455555444444555544433 23456777 999999887554
No 2
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.38 E-value=4.1e-13 Score=103.23 Aligned_cols=80 Identities=20% Similarity=0.200 Sum_probs=45.8
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECV 82 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v 82 (283)
+.+|.+|+||||+|+.+|+.+++++|+++ +..+|.+|.+|+||||+|+..++ .+.+
T Consensus 34 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~d~~g~tpL~~A~~~~~-------------------~~~v 89 (123)
T 3aaa_C 34 NRTLEGGRKPLHYAADCGQLEILEFLLLK-----GADINAPDKHHITPLLSAVYEGH-------------------VSCV 89 (123)
T ss_dssp TSCCTTSSCHHHHHHHTTCHHHHHHHHTT-----TCCTTCCCTTSCCHHHHHHHHTC-------------------HHHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHc-----CCCCCcCCCCCCCHHHHHHHcCC-------------------HHHH
Confidence 44555666666666666666666666554 23355666666666666665554 3333
Q ss_pred hccccc-ccccccccccCCccccccc
Q 041061 83 KDIAPS-HYTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 83 ~~~~~~-~~~~~~n~~~G~T~~dl~~ 107 (283)
+.++.. ...+.+|. +|.||.+++.
T Consensus 90 ~~Ll~~ga~~~~~~~-~g~t~l~~A~ 114 (123)
T 3aaa_C 90 KLLLSKGADKTVKGP-DGLTAFEATD 114 (123)
T ss_dssp HHHHHTTCCTTCCCT-TSCCHHHHCC
T ss_pred HHHHHcCCCCCCcCC-CCCCHHHHhC
Confidence 333222 23456677 8999988874
No 3
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.38 E-value=5.2e-13 Score=104.48 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=75.7
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCCh
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPV 69 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~a 69 (283)
.+|.+|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+.+.. ..++
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNG-----SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 46889999999999999999999999863 4588999999999999999888664321 2367
Q ss_pred hhhHHHhhhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 70 YQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 70 l~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
++.+...+..+.++.++.. ...+.+|. +|.||.+++.+.
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~ 119 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNI-FGLRPVDYTDDE 119 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCGGGGCCCH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHhhc
Confidence 7776666656656555433 23456777 999999998654
No 4
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.35 E-value=1.4e-12 Score=104.98 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=77.7
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+..|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 110 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-----ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT 110 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHhcC-----CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCC
Confidence 567888999999999999999999999863 4589999999999999999888665321 236
Q ss_pred hhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccchhh
Q 041061 69 VYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRTHE 111 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~~~ 111 (283)
+++.+...+..+.++.++... ..+.+|. +|+||.+++.+.+.
T Consensus 111 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~a~~~~~ 153 (165)
T 3twr_A 111 PLHEAAAKGKYEICKLLLQHGADPTKKNR-DGNTPLDLVKDGDT 153 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCTGGGSCTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCChhHhHhcCCh
Confidence 777766666566565555432 3456677 99999999876443
No 5
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.34 E-value=7.9e-13 Score=96.74 Aligned_cols=77 Identities=29% Similarity=0.308 Sum_probs=57.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhcccc
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDIAP 87 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~~ 87 (283)
+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+. ++.++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~n~~d~~g~t~L~~A~~~~~~~~-------------------v~~Ll~ 56 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLAARNGHLEV-------------------VKLLLE 56 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHH-------------------HHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHcCCHHH-------------------HHHHHH
Confidence 5899999999999999999999863 4689999999999999999887432 111111
Q ss_pred -cccccccccccCCcccccccch
Q 041061 88 -SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 88 -~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
....+.+|. +|.||.+++.+.
T Consensus 57 ~ga~~~~~d~-~g~t~l~~A~~~ 78 (93)
T 1n0q_A 57 AGADVNAKDK-NGRTPLHLAARN 78 (93)
T ss_dssp TTCCTTCCCT-TSCCHHHHHHHT
T ss_pred cCCCCCccCC-CCCCHHHHHHHc
Confidence 123455677 899998876543
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.33 E-value=1.3e-12 Score=114.76 Aligned_cols=99 Identities=14% Similarity=0.048 Sum_probs=49.3
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChh
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVY 70 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al 70 (283)
+|.+|+||+|+|+..++.+++++|++.+ ..+|.+|.+|+||||+|+..|+.+.+.. ..+++
T Consensus 115 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-----~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~L 189 (269)
T 4b93_B 115 RNADQAVPLHLACQQGHFQVVKCLLDSN-----AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTAL 189 (269)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHH
T ss_pred cCCCCCCccccccccChHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHH
Confidence 4444555555555555555555554432 2344455555555555554444333210 12334
Q ss_pred hhHHHhhhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 71 QFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 71 ~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
..+...+..+.++.++.. ...+.+|+ +|+||.+++.+.
T Consensus 190 h~A~~~g~~~~v~~Ll~~Gad~~~~d~-~G~TpL~~A~~~ 228 (269)
T 4b93_B 190 HEAVIEKHVFVVELLLLHGASVQVLNK-RQRTAVDCAEQN 228 (269)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCSGGGSCTT
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHhC
Confidence 443333334444444432 24567787 999999998653
No 7
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.33 E-value=2.4e-12 Score=105.30 Aligned_cols=103 Identities=14% Similarity=0.100 Sum_probs=78.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 106 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACREGRSAVVEMLIMRG-----ARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGN 106 (179)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 4678899999999999999999999999863 4589999999999999999988665321 23
Q ss_pred ChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccchh
Q 041061 68 PVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRTH 110 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~~ 110 (283)
++++.+...+..+.++.++.. ...+.+|. +|+||.+++.+..
T Consensus 107 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 107 VPLHYACFWGQDQVAEDLVANGALVSICNK-YGEMPVDKAKAPL 149 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSBCCT-TSCCGGGGSCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCcchhcc-CCCCcHHHHHHHH
Confidence 677777666656656555433 23456777 9999999986543
No 8
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.32 E-value=1.3e-12 Score=104.13 Aligned_cols=100 Identities=16% Similarity=0.094 Sum_probs=58.7
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+.+|.+|+||||+ +.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+.+.. ..+
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELLKQG-----ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL 103 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCC
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCc
Confidence 4456666677776 6666666666666642 3456666666677766666665443210 124
Q ss_pred hhhhHHHhhhhhhhhcccccccccccccccCCcccccccch
Q 041061 69 VYQFQEELQWFECVKDIAPSHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
+++.+...+..+.++.++.....+.+|. +|.||.+++.+.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-~g~t~l~~A~~~ 143 (156)
T 1bd8_A 104 PIHLAVQEGHTAVVSFLAAESDLHRRDA-RGLTPLELALQR 143 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHTTSCTTCCCT-TSCCHHHHHHHS
T ss_pred HHHHHHHhChHHHHHHHHhccCCCCcCC-CCCCHHHHHHHc
Confidence 5555444444444554444344556676 899998877543
No 9
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.28 E-value=3.3e-12 Score=93.33 Aligned_cols=55 Identities=29% Similarity=0.409 Sum_probs=49.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+
T Consensus 28 ~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~t~l~~A~~~~~~~ 82 (93)
T 1n0q_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLAARNGHLE 82 (93)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHHHcCCHH
Confidence 4678999999999999999999999999874 468999999999999999988744
No 10
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.27 E-value=4e-12 Score=99.45 Aligned_cols=82 Identities=21% Similarity=0.188 Sum_probs=44.6
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECV 82 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v 82 (283)
+.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++ .+.+
T Consensus 41 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~d~~g~t~L~~A~~~~~-------------------~~~v 96 (136)
T 2jab_A 41 NAKDEYGLTPLYLATAHGHLEIVEVLLKNG-----ADVNAVDAIGFTPLHLAAFIGH-------------------LEIA 96 (136)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHHTC-------------------HHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcCCCCCCCHHHHHHHcCC-------------------HHHH
Confidence 344555555555555555555555555542 2355555555555555555554 2333
Q ss_pred hccccc-ccccccccccCCcccccccch
Q 041061 83 KDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 83 ~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
+.++.. ...+.+|. +|.||.+++.+.
T Consensus 97 ~~Ll~~g~~~~~~~~-~g~tpl~~A~~~ 123 (136)
T 2jab_A 97 EVLLKHGADVNAQDK-FGKTAFDISIGN 123 (136)
T ss_dssp HHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHcCCCCcCcCC-CCCCHHHHHHHC
Confidence 333222 22345666 899998887543
No 11
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.25 E-value=4.3e-12 Score=104.46 Aligned_cols=82 Identities=21% Similarity=0.208 Sum_probs=50.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFEC 81 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~ 81 (283)
+.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+| .+|+||||+|+..++.+ .
T Consensus 70 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~~g~tpL~~A~~~~~~~-------------------~ 125 (183)
T 3deo_A 70 DAVDENGRTALLFVAGLGSDKCVRLLAEAG-----ADLDHRDMRGGLTALHMAAGYVRPE-------------------V 125 (183)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCSSSSCCHHHHHHHTTCHH-------------------H
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcCCCCCCCCHHHHHHhcCcHH-------------------H
Confidence 456666777777777777777777776652 3466666 66777777777666532 2
Q ss_pred hhccccc-ccccccccccCCcccccccch
Q 041061 82 VKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 82 v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
++.++.. ...+.+|. +|.||.+++.+.
T Consensus 126 v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 153 (183)
T 3deo_A 126 VEALVELGADIEVEDE-RGLTALELAREI 153 (183)
T ss_dssp HHHHHHHTCCTTCCCT-TSCCHHHHHHHH
T ss_pred HHHHHHcCCCCcCCCC-CCCCHHHHHHHh
Confidence 2222221 23455677 899998887553
No 12
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.25 E-value=9e-12 Score=100.44 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=75.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 103 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-----ADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG 103 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSC
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCC
Confidence 4678899999999999999999999999863 4578899999999999999888665321 23
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
++++.+...+..+.++.++... ....++. +|.||.+++.+.
T Consensus 104 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 145 (167)
T 3v31_A 104 TPLLYAVHGNHVKCVKMLLESGADPTIETD-SGYNSMDLAVAL 145 (167)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 6677666555555555554332 3345666 899998887654
No 13
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.25 E-value=6e-12 Score=101.97 Aligned_cols=102 Identities=13% Similarity=0.041 Sum_probs=77.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 103 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWG-----ADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGG 103 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 4677999999999999999999999999874 4589999999999999999988665321 23
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
++++.+...+..+.++.++..+ ..+.++. +|.||.+++.+.
T Consensus 104 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~ 145 (172)
T 3v30_A 104 TPLLYAVRGNHVKCVEALLARGADLTTEAD-SGYTPMDLAVAL 145 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHHHHHHh
Confidence 6677766655555565554332 3455666 899999887654
No 14
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.24 E-value=4e-12 Score=99.46 Aligned_cols=101 Identities=8% Similarity=-0.014 Sum_probs=75.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccccc-------------CC--
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGI-------------RP-- 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~-------------~~-- 66 (283)
++.+|.+|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+. ++.+.+. ..
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g 78 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAG-----ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATL 78 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTT
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcC-----CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCC
Confidence 5778999999999999999999999999873 4589999999999999999 8765432 12
Q ss_pred CChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 67 GPVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
.++++.+...+..+.++.++.. ...+.++. +|.||.+++.+.
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 121 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGARLDVCDA-WGRLPVDLAEEQ 121 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS-SSSCHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHc
Confidence 3667766665555555555433 23456666 899998876543
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.24 E-value=5.7e-12 Score=109.44 Aligned_cols=104 Identities=13% Similarity=0.020 Sum_probs=65.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccC-CCCcHHHHHHhcCCcccccC--------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDE-NGYTILHHVADMKHYEYGIR--------------P 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~-~GnTpLHlAa~~~~~~~~~~--------------~ 66 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|. +|+||||+|+..++.+.+.. .
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 225 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAG-----ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG 225 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Confidence 4667889999999999999999999999874 45888885 49999999999888665421 2
Q ss_pred CChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccchhh
Q 041061 67 GPVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRTHE 111 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~~~ 111 (283)
.++++.+...+..+.++.++.. ...+.+|+ +|.||.+.+.+...
T Consensus 226 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 226 RTPLGSALLRPNPILARLLRAHGAPEPEDGG-DKLSPCSSSGSDSD 270 (282)
T ss_dssp CCHHHHHHTSSCHHHHHHHHHTTCCCCCCC----------------
T ss_pred CCHHHHHHHcCCcHHHHHHHHcCCCcCcCCC-cccccccccCCccc
Confidence 3677776655555555554433 23566777 89999998876543
No 16
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.23 E-value=8.7e-12 Score=101.06 Aligned_cols=102 Identities=19% Similarity=0.132 Sum_probs=72.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 114 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNG-----ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGH 114 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 3567889999999999999999999999863 4588899999999999999888654321 23
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
++++.+...+..+.++.++... ..+.+|. +|.||.+++.+.
T Consensus 115 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 156 (169)
T 2y1l_E 115 TPLHLAAMFGHLEIVEVLLKNGADVNAQDK-FGKTAFDISIDN 156 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHh
Confidence 5666665555455555444322 2345566 788888776543
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.23 E-value=1.4e-11 Score=103.79 Aligned_cols=100 Identities=17% Similarity=0.092 Sum_probs=57.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC---------------CC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---------------PG 67 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---------------~g 67 (283)
+.+|.+|+||||+|+.+|+.+++++|+++ +..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 101 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~ 175 (228)
T 2dzn_A 101 NKITNQGVTCLHLAVGKKWFEVSQFLIEN-----GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW 175 (228)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSC
T ss_pred ccCCcCCCCHHHHHHHcCCHhHHHHHHHc-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCC
Confidence 34556666666666666666666666654 23466677777777777776665443210 12
Q ss_pred ChhhhHHHhhhhhhhhccc-c-cccccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIA-P-SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~-~-~~~~~~~n~~~G~T~~dl~~~ 108 (283)
++++.+...+..+.++.++ . ....+.+|+ +|+||.+++.+
T Consensus 176 t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~-~g~t~l~~A~~ 217 (228)
T 2dzn_A 176 TPLFHALAEGHGDAAVLLVEKYGAEYDLVDN-KGAKAEDVALN 217 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHCCCSCCBCT-TSCBGGGGCSS
T ss_pred CHHHHHHHcCCHHHHHHHHHhcCCCCCccCC-CCCcHHHHHHH
Confidence 4555554444444455444 2 223455666 77888777654
No 18
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.23 E-value=8.3e-12 Score=99.88 Aligned_cols=100 Identities=18% Similarity=0.146 Sum_probs=54.6
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+.+|.+|+||||+|+. |+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 105 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLLRG-----ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL 105 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 4456666666666666 6666666666542 3356666666666666666665443210 124
Q ss_pred hhhhHHHhhhhhhhhccccccc--ccccccccCCcccccccch
Q 041061 69 VYQFQEELQWFECVKDIAPSHY--TMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~~--~~~~n~~~G~T~~dl~~~~ 109 (283)
+++.+...+..+.++.++.... .+.++. +|.||.+++.+.
T Consensus 106 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~g~t~l~~A~~~ 147 (162)
T 1ihb_A 106 PLHLAAKEGHLRVVEFLVKHTASNVGHRNH-KGDTACDLARLY 147 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHccCCCCCCcCC-CCCcHHHHHHHc
Confidence 4444433333444444433222 245666 889998876543
No 19
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.23 E-value=8.9e-12 Score=99.22 Aligned_cols=99 Identities=15% Similarity=0.019 Sum_probs=68.3
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChh
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVY 70 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al 70 (283)
.|..|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+.+.. ..+++
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 104 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAG-----VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTAL 104 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTT-----CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 5778999999999999999999998763 4578899999999999998887654311 22556
Q ss_pred hhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 71 QFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 71 ~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
+.+...+..+.++.++..+ ..+.+|. +|.||.+++.+.
T Consensus 105 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~ 143 (153)
T 1awc_B 105 HWATEHNHQEVVELLIKYGADVHTQSK-FCKTAFDISIDN 143 (153)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccCC-CCCCHHHHHHHc
Confidence 6555444444444443322 2345566 788887776543
No 20
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.23 E-value=8.2e-12 Score=110.29 Aligned_cols=83 Identities=23% Similarity=0.231 Sum_probs=65.5
Q ss_pred cccccCCCChHHHHHHHh---CCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhh
Q 041061 2 LSTVNQKGQTILHVAVRR---RRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQW 78 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~---g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~ 78 (283)
++..|+.|+||||+|+.+ |+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-----a~in~~d~~g~TpLh~A~~~g~~~~---------------- 220 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-----GNLDKQTGKGSTALHYCCLTDNAEC---------------- 220 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-----SCTTCCCTTCCCHHHHHHHTTCHHH----------------
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCC-----CCccccCCCCCCHHHHHHHcCCHHH----------------
Confidence 456689999999999999 8999999999974 5699999999999999999887432
Q ss_pred hhhhhcccc-cccccccccccCCcccccccch
Q 041061 79 FECVKDIAP-SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 79 ~~~v~~~~~-~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
++.++. ....+.+|+ +|+||.+++.+.
T Consensus 221 ---v~~Ll~~gad~~~~d~-~g~tpL~~A~~~ 248 (278)
T 1dcq_A 221 ---LKLLLRGKASIEIANE-SGETPLDIAKRL 248 (278)
T ss_dssp ---HHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred ---HHHHHHcCCCCCCccC-CCCCHHHHHHHc
Confidence 222221 123456777 999999987654
No 21
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.22 E-value=6.6e-12 Score=94.93 Aligned_cols=82 Identities=26% Similarity=0.150 Sum_probs=60.5
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECV 82 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v 82 (283)
...|.+|+|+||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+. +
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~i~~~d~~g~tpLh~A~~~~~~~~-------------------v 73 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANG-----ADVAAKDKNGSTPLHLAARNGHLEV-------------------V 73 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHH-------------------H
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHHHcCCHHH-------------------H
Confidence 467899999999999999999999999863 4689999999999999999887432 1
Q ss_pred hcccc-cccccccccccCCcccccccch
Q 041061 83 KDIAP-SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 83 ~~~~~-~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
+.++. ....+.+|. +|.||.+++.+.
T Consensus 74 ~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 100 (110)
T 2zgd_A 74 KLLLEAGADVXAQDK-FGKTAFDISIDN 100 (110)
T ss_dssp HHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred HHHHHcCCCcccccc-CCCcHHHHHHHc
Confidence 21111 123455666 899998887543
No 22
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.22 E-value=1.6e-11 Score=101.32 Aligned_cols=54 Identities=19% Similarity=0.104 Sum_probs=32.5
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
+.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~-----~~~~~~~~~g~t~L~~A~~~~~~~ 82 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENF-----DKLEDKDIEGSTALIWAVKNNRLG 82 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHH-----CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-----cccccccccCccHHHHHHHcCCHH
Confidence 455666666666666666666666666542 235556666666666666655544
No 23
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.21 E-value=1.1e-11 Score=103.11 Aligned_cols=102 Identities=15% Similarity=0.071 Sum_probs=64.4
Q ss_pred cccc-CCCChHHHHHHHhCC----HHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc------cc---C---
Q 041061 3 STVN-QKGQTILHVAVRRRR----HDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY------GI---R--- 65 (283)
Q Consensus 3 e~~D-~~G~t~LH~Av~~g~----~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~------~~---~--- 65 (283)
+.+| ..|+||||+|+.+|+ .+++++|+++ +..+|.+|.+|+||||+|+..++.+. +. .
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-----Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Ga 105 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINK-----GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA 105 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-----TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-----CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCC
Confidence 3444 668888888888774 8888888886 34588888888888888887765321 10 0
Q ss_pred --------CC-ChhhhHHHhh-----hhhhhhcccc--cccccccccccCCcccccccchh
Q 041061 66 --------PG-PVYQFQEELQ-----WFECVKDIAP--SHYTMHRDTRKNMTAGDLFNRTH 110 (283)
Q Consensus 66 --------~g-~al~l~~~l~-----~~~~v~~~~~--~~~~~~~n~~~G~T~~dl~~~~~ 110 (283)
.. ++++.+.... ..+.++.++. ....+.+|+ +|+||.+++.+..
T Consensus 106 din~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~-~G~TpL~~A~~~~ 165 (186)
T 3t8k_A 106 DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDK-WGLTALEFVKRCQ 165 (186)
T ss_dssp CSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCT-TSCCHHHHHHTTT
T ss_pred CCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCC-CCCCHHHHHHHcC
Confidence 22 4444433211 1122333333 345677888 9999999987654
No 24
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.20 E-value=1.3e-11 Score=93.39 Aligned_cols=81 Identities=22% Similarity=0.179 Sum_probs=62.0
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhh
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVK 83 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~ 83 (283)
.+|++|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+. ++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~d~~g~t~L~~A~~~~~~~~-------------------~~ 59 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG-----ADVNARSKDGNTPLHLAAKNGHAEI-------------------VK 59 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT-----CCSSCCCSSSCCTTHHHHTTTCHHH-------------------HH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCcHHH-------------------HH
Confidence 47999999999999999999999998863 4589999999999999998887432 22
Q ss_pred ccccc-ccccccccccCCcccccccch
Q 041061 84 DIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 84 ~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
.++.. ...+.++. +|.||.+++...
T Consensus 60 ~Ll~~g~~~~~~d~-~g~tpl~~A~~~ 85 (115)
T 2l6b_A 60 LLLAKGADVNARSK-DGNTPEHLAKKN 85 (115)
T ss_dssp HHTTTTCCTTCCCT-TCCCTTHHHHTT
T ss_pred HHHHcCCCCcccCC-CCCCHHHHHHHC
Confidence 22211 22345666 899998876543
No 25
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.19 E-value=3.3e-11 Score=105.86 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=65.7
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhc
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKD 84 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~ 84 (283)
.|..|+||||+|+.+|+.+++++|++. +..+|.+|.+|+||||+|+..|+.+. ++.
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----g~d~~~~d~~g~tpL~~A~~~~~~~~-------------------v~~ 250 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQA-----RYDVNIKDYDGWTPLHAAAHWGKEEA-------------------CRI 250 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTT-----TCCTTCCCTTCCCHHHHHHHTTCHHH-------------------HHH
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHc-----CCCCCCcCCCCCcHHHHHHhcCCHHH-------------------HHH
Confidence 567899999999999999999999986 35689999999999999999887432 122
Q ss_pred cccc-ccccccccccCCcccccccchhhhhH
Q 041061 85 IAPS-HYTMHRDTRKNMTAGDLFNRTHEDQL 114 (283)
Q Consensus 85 ~~~~-~~~~~~n~~~G~T~~dl~~~~~~~~~ 114 (283)
++.. ...+.+|. +|+||.+++.+...+..
T Consensus 251 Ll~~gad~~~~d~-~g~t~l~~A~~~~~~~l 280 (299)
T 1s70_B 251 LVENLCDMEAVNK-VGQTAFDVADEDILGYL 280 (299)
T ss_dssp HHHTTCCTTCCCT-TSCCTTTSCCSGGGHHH
T ss_pred HHHcCCCCCCcCC-CCCCHHHHHHHHHHHHH
Confidence 2211 23456777 99999999977554433
No 26
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.19 E-value=1.6e-11 Score=100.58 Aligned_cols=92 Identities=21% Similarity=0.088 Sum_probs=70.0
Q ss_pred hHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChhhhHHHh
Q 041061 11 TILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVYQFQEEL 76 (283)
Q Consensus 11 t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al~l~~~l 76 (283)
+.|+.||++|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+++..+...
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~G-----advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENG-----ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHc
Confidence 4799999999999999999874 5699999999999999999888654321 23677777666
Q ss_pred hhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 77 QWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 77 ~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
+..+.++.++... ..+.++. +|.||..++.+
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~-~G~TpLh~A~~ 112 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDS-DGRTPLHHAAE 112 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCHHHHHHHHHCcCCCCCCCC-CCCCHHHHHHH
Confidence 6666666655432 3566777 89999877644
No 27
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.19 E-value=1.6e-11 Score=109.73 Aligned_cols=88 Identities=22% Similarity=0.227 Sum_probs=53.9
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECV 82 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v 82 (283)
+.+|.+|+||||+|+++|+.+++++|+++ +..+|.+|.+|+||||+|+..++ .+.+
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----ga~~n~~d~~g~t~L~~A~~~~~-------------------~~~v 296 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHNDVMEVLHKH-----GAKMNALDSLGQTALHRAALAGH-------------------LQTC 296 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHHTC-------------------HHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHcCc-------------------HHHH
Confidence 44566666666666666666666666654 23466666666666666666665 3333
Q ss_pred hccccc-ccccccccccCCcccccccchhhhhHH
Q 041061 83 KDIAPS-HYTMHRDTRKNMTAGDLFNRTHEDQLK 115 (283)
Q Consensus 83 ~~~~~~-~~~~~~n~~~G~T~~dl~~~~~~~~~~ 115 (283)
+.++.. .....+|+ +|.||.++..+...+...
T Consensus 297 ~~Ll~~gad~~~~~~-~g~tal~~a~~~~~~~l~ 329 (351)
T 3utm_A 297 RLLLSYGSDPSIISL-QGFTAAQMGNEAVQQILS 329 (351)
T ss_dssp HHHHHTTCCTTCCCT-TSCCHHHHSCHHHHHHHH
T ss_pred HHHHHcCCCCCCcCC-CCCChhhhhhHHHHHHHH
Confidence 333322 23456777 999999998665444443
No 28
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.19 E-value=1.7e-11 Score=107.67 Aligned_cols=82 Identities=23% Similarity=0.161 Sum_probs=62.3
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECV 82 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v 82 (283)
+..|.+|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..|+.+ .+
T Consensus 177 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-----ad~n~~d~~G~TpLh~A~~~g~~~-------------------iv 232 (276)
T 4hbd_A 177 AKASQAGQTALMLAVSHGRVDVVKALLACE-----ADVNVQDDDGSTALMCACEHGHKE-------------------IA 232 (276)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHH-------------------HH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhCC-----CCCCCCCCCCCCHHHHHHHCCCHH-------------------HH
Confidence 456778999999999999999999998863 458899999999999999888743 23
Q ss_pred hcccc--cccccccccccCCcccccccch
Q 041061 83 KDIAP--SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 83 ~~~~~--~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
+.++. ....+.+|+ +|.||.+++.+.
T Consensus 233 ~~Ll~~~gad~~~~d~-~g~TpL~~A~~~ 260 (276)
T 4hbd_A 233 GLLLAVPSCDISLTDR-DGSTALMVALDA 260 (276)
T ss_dssp HHHHTSTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred HHHHhcCCCCCcCcCC-CCCCHHHHHHHc
Confidence 33332 223456777 999999887654
No 29
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.18 E-value=1.4e-11 Score=104.06 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=69.3
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccccc----C-----------CC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGI----R-----------PG 67 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~----~-----------~g 67 (283)
+..|.+|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+.+. . ..
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~ 141 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNR-----VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGD 141 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSC
T ss_pred cccccccccccccccccCcHHHHHHHHhCC-----CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCC
Confidence 456777888888888888888888888753 447788888888888888877755421 0 12
Q ss_pred ChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 68 PVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
+++..+...+..+.++.++.. ...+.+|. +|.||.+++.+.
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~ 183 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKGARTDLRNI-EKKLAFDMATNA 183 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSCCCCT-TSCCHHHHCCSH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCHHHHhcch
Confidence 566666555555555555433 23456777 999999987653
No 30
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.18 E-value=2e-11 Score=104.70 Aligned_cols=52 Identities=33% Similarity=0.395 Sum_probs=36.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
+.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++
T Consensus 64 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 64 SLPNDEGITALHNAVCAGHTEIVKFLVQFG-----VNVNAADSDGWTPLHCAASCNN 115 (239)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHHHcCC
Confidence 456677777777777777777777777653 3467777777777777776665
No 31
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.17 E-value=1.9e-11 Score=105.46 Aligned_cols=82 Identities=21% Similarity=0.218 Sum_probs=51.9
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhh
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFE 80 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~ 80 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+| .+|+||||+|+..++.+
T Consensus 70 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~~g~t~L~~A~~~g~~~------------------- 125 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAG-----ADLDHRDMRGGLTALHMAAGYVRPE------------------- 125 (244)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCSSSCCCHHHHHHHTTCHH-------------------
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCcCCCCCCCCHHHHHHHcCCHH-------------------
Confidence 3556677777777777777777777777653 3466666 66777777777766632
Q ss_pred hhhccccc-ccccccccccCCcccccccc
Q 041061 81 CVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 81 ~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
.++.++.. ...+.+|+ +|.||.+++.+
T Consensus 126 ~v~~Ll~~ga~~~~~d~-~g~t~l~~A~~ 153 (244)
T 3ui2_A 126 VVEALVELGADIEVEDE-RGLTALELARE 153 (244)
T ss_dssp HHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCC-CCCcHHHHHHH
Confidence 23322222 23445666 89999887754
No 32
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.17 E-value=5.8e-11 Score=101.66 Aligned_cols=97 Identities=13% Similarity=0.004 Sum_probs=51.6
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChh
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVY 70 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al 70 (283)
.+.+|.|+||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+++
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpL 91 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKEM-----NDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPL 91 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHHS-----SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhcC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 3445556666666666666666666542 2355566666666666666555443210 12444
Q ss_pred hhHHHhhhhhhhhcccccc-cccccccccCCcccccc
Q 041061 71 QFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLF 106 (283)
Q Consensus 71 ~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~ 106 (283)
..+...+..+.++.++... ..+.+++.+|.||.+++
T Consensus 92 h~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 92 HCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 4444444444444444332 23334322899999987
No 33
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.17 E-value=4.6e-11 Score=101.35 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=60.6
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+..|..|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+
T Consensus 105 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 179 (237)
T 3b7b_A 105 NCQDDGGWTPMIWATEYKHVDLVKLLLSKG-----SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDS 179 (237)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 345566666666666666666666666642 3466777777777777777666543210 235
Q ss_pred hhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccchh
Q 041061 69 VYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRTH 110 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~~ 110 (283)
+++.+...+..+.++.++..+ ....+|+ +|+||.+++.+..
T Consensus 180 ~L~~A~~~~~~~~v~~Ll~~gad~~~~d~-~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 180 PLHIAARENRYDCVVLFLSRDSDVTLKNK-EGETPLQCASLNS 221 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHSCTTC
T ss_pred HHHHHHHhCCHhHHHHHHHcCCCCCccCC-CCCCHHHHHHHHH
Confidence 666655544444444444332 3445666 8888888776543
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.15 E-value=3.6e-11 Score=101.62 Aligned_cols=54 Identities=24% Similarity=0.335 Sum_probs=32.0
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
+.+|..|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+
T Consensus 67 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~ 120 (231)
T 3aji_A 67 NDKDDAGWSPLHIAASAGXDEIVKALLVKG-----AHVNAVNQNGCTPLHYAASKNRHE 120 (231)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCcCCCCCCHHHHHHHcCHHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCCHH
Confidence 445666666666666666666666666542 235555566666666665555443
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.15 E-value=2.4e-11 Score=104.88 Aligned_cols=53 Identities=23% Similarity=0.256 Sum_probs=27.6
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
+.+|.+|+||||+|+.+|+.+++++|++++. ..++.+|.+|+||||+|+..++
T Consensus 84 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~~~ 136 (253)
T 1yyh_A 84 NIQDNMGRTPLHAAVSADAQGVFQILIRNRA----TDLDARMHDGTTPLILAARLAV 136 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT----SCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCccccCCCCCcHHHHHHHcCh
Confidence 3455566666666666666666666655432 1344444444444444444444
No 36
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.15 E-value=2.1e-11 Score=100.65 Aligned_cols=101 Identities=21% Similarity=0.072 Sum_probs=70.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 135 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKG-----SNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGE 135 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCC
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 4667899999999999999999999999874 4589999999999999999988654310 22
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
++++.+...+..+.++.++..+ ..+.+|. +|.||.+++..
T Consensus 136 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~ 176 (192)
T 2rfm_A 136 TPLIVASKYGRSEIVKKLLELGADISARDL-TGLTAEASARI 176 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHH
Confidence 5555555444444444443321 2334454 66666666543
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.14 E-value=3.8e-11 Score=101.66 Aligned_cols=106 Identities=16% Similarity=0.043 Sum_probs=70.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccccc-----------------
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGI----------------- 64 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~----------------- 64 (283)
++.+|.+|+||||+|+.+|+.+++++|++++.+......+.+|.+|+||||+|+..++.+.+.
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 109 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSV 109 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcc
Confidence 456788899999999999999999999887543112223677889999999999888765431
Q ss_pred ----------CCCChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccc
Q 041061 65 ----------RPGPVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 65 ----------~~g~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
...+++..+...+..+.++.++.. ...+.+|. +|.||.+++..
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~A~~ 163 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDS-LGNTVLHILIL 163 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHT
T ss_pred eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHH
Confidence 022556665555555555544432 23445566 78888777644
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.14 E-value=2.9e-11 Score=100.01 Aligned_cols=100 Identities=14% Similarity=0.005 Sum_probs=69.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC---------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---------------P 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---------------~ 66 (283)
++.+|.+|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. .
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g 106 (201)
T 3hra_A 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRG-----ADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYG 106 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCC
Confidence 4667889999999999999999999999863 4588899999999999998887654310 1
Q ss_pred CChhhhHHHhhhhhhhhcccccc--cccccccccCCccccccc
Q 041061 67 GPVYQFQEELQWFECVKDIAPSH--YTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~~~~~~--~~~~~n~~~G~T~~dl~~ 107 (283)
.+++..+...+..+.++.++... ..+.++. +|.||..++.
T Consensus 107 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-~g~t~L~~A~ 148 (201)
T 3hra_A 107 GNALIPAAEKGHIDNVKLLLEDGREDIDFQND-FGYTALIEAV 148 (201)
T ss_dssp CCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT-TSCCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC-CCCCHHHHHH
Confidence 24555554444444444444322 2345555 7777776654
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.14 E-value=2.6e-11 Score=109.14 Aligned_cols=53 Identities=19% Similarity=0.189 Sum_probs=48.0
Q ss_pred ccc-ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 2 LST-VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 2 ie~-~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
++. +|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..|+
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G-----ad~n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHG-----SNRLYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTBCCTTCCCHHHHHHHSSH
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHhcc
Confidence 345 7999999999999999999999999974 5689999999999999999876
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.13 E-value=2.9e-11 Score=102.64 Aligned_cols=105 Identities=16% Similarity=0.064 Sum_probs=65.7
Q ss_pred CcccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------C
Q 041061 1 MLSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------P 66 (283)
Q Consensus 1 ~ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~ 66 (283)
|++.+|++|+||||+|+++|+.+++++|++.... .+..+|.+|.+|+||||+|+..|+.+.+.. .
T Consensus 1 l~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 79 (241)
T 1k1a_A 1 MATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHG 79 (241)
T ss_dssp ------CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 6788999999999999999999999999872100 135689999999999999999998654321 1
Q ss_pred CChhhhHHHhhhhhhhhcccccc-----cccccccccCCccccccc
Q 041061 67 GPVYQFQEELQWFECVKDIAPSH-----YTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~~~~~~-----~~~~~n~~~G~T~~dl~~ 107 (283)
.+++..+...+..+.++.++... ..+..+. +|.||...+.
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t~L~~A~ 124 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY-DGLTALHVAV 124 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT-TSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc-CCCcHHHHHH
Confidence 24555554444444443333221 2334444 6777766543
No 41
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.13 E-value=3.5e-11 Score=97.39 Aligned_cols=79 Identities=16% Similarity=0.062 Sum_probs=60.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 136 (172)
T 3v30_A 62 PHILAKERESALSLASTGGYTDIVGLLLERD-----VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGY 136 (172)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred chhhcccCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 3567899999999999999999999999863 4589999999999999999988665321 23
Q ss_pred ChhhhHHHhhhhhhhhcc
Q 041061 68 PVYQFQEELQWFECVKDI 85 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~ 85 (283)
++++.+...+..+.++.+
T Consensus 137 t~l~~A~~~~~~~~~~~L 154 (172)
T 3v30_A 137 TPMDLAVALGYRKVQQVI 154 (172)
T ss_dssp CHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHhCcHHHHHHH
Confidence 667766655555544433
No 42
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.13 E-value=6.1e-11 Score=94.84 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=41.9
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCc-HHHHHHhcCCcccccC--------------CC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYT-ILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnT-pLHlAa~~~~~~~~~~--------------~g 67 (283)
+.+|.+|+||||+|+ +|+.+++++|+++ +..+|.+|.+|+| |||+|+..++.+.+.. ..
T Consensus 39 ~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-----g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 112 (156)
T 1bi7_B 39 NAPNSYGRRPIQVMM-MGSARVAELLLLH-----GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGR 112 (156)
T ss_dssp TCCCSSSCCTTTSSC-TTCHHHHHHHHTT-----TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCC
T ss_pred CCCCCCCCCHHHHHH-cCCHHHHHHHHHc-----CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCC
Confidence 445566666666653 5666666666654 2345666666666 6666666555443210 12
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGD 104 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~d 104 (283)
++++.+...+..+.++.++..+ ....+|. .|.||.+
T Consensus 113 tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~~~ 149 (156)
T 1bi7_B 113 LPVDLAEELGHRDVARYLRAAAGGTRGSNH-ARIDAAE 149 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred CHHHHHHHhCHHHHHHHHHHcCCCCCccCc-CcCcccc
Confidence 4455444444444454444332 2345555 6777654
No 43
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.13 E-value=5.2e-11 Score=90.62 Aligned_cols=96 Identities=24% Similarity=0.223 Sum_probs=46.9
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChhhhH
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVYQFQ 73 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al~l~ 73 (283)
+|+||||+|+++|+.+++++|++++ ..++.+|.+|+||||+|+..++.+.+.. ..+++..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC-----CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHH
Confidence 3555555555555555555555542 2345555555555555555554332210 11333333
Q ss_pred HHhhhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 74 EELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 74 ~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
...+..+.++.++.. .....+|. +|.||.+++.+.
T Consensus 76 ~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 111 (126)
T 1n0r_A 76 ARNGHLEVVKLLLEAGADVNAKDK-NGRTPLHLAARN 111 (126)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred HHcChHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHc
Confidence 332223333333222 12345566 889998876543
No 44
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.13 E-value=4.1e-11 Score=103.96 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=51.4
Q ss_pred CcccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 1 MLSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 1 ~ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
+++.+|++|+||||+|+++|+.+++++|++.+.. ...+|.+|.+|+||||+|+..|+.+
T Consensus 1 i~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~~~g~t~L~~A~~~g~~~ 59 (282)
T 1oy3_D 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAG--HEYLDLQNDLGQTALHLAAILGEAS 59 (282)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTT--SGGGGCCCTTSCCHHHHHHHHTCHH
T ss_pred CCCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC--cccccccCCCCCCHHHHHHHcCCHH
Confidence 4688999999999999999999999999987442 2348999999999999999998844
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.12 E-value=4.2e-11 Score=101.43 Aligned_cols=53 Identities=19% Similarity=0.158 Sum_probs=46.9
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
..|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+
T Consensus 116 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 116 NLIYYGEHPLSFAACVGSEEIVRLLIEHG-----ADIRAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp CSCCCCSSHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHTCSCHH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHcCChH
Confidence 34668999999999999999999999863 568999999999999999988743
No 46
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.12 E-value=5.2e-11 Score=89.89 Aligned_cols=55 Identities=20% Similarity=0.275 Sum_probs=49.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+
T Consensus 50 i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~~~~~ 104 (110)
T 2zgd_A 50 VAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-----ADVXAQDKFGKTAFDISIDNGNED 104 (110)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccccCCCcHHHHHHHcCCHH
Confidence 4678999999999999999999999999873 458999999999999999988743
No 47
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.12 E-value=1e-10 Score=99.27 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=58.0
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
+..|.+|+||||+|+.+|+.+++++|++.+ ..++.+| .+|+||||+|+..++.+.+.. ..
T Consensus 110 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 184 (241)
T 1k1a_A 110 EARNYDGLTALHVAVNTECQETVQLLLERG-----ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGS 184 (241)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred cccCcCCCcHHHHHHHcCCHHHHHHHHHcC-----CCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 344566666666666666666666666542 3456666 667777777776666443210 22
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
++++.+...+..+.++.++..+ ..+.+|. +|+||.+++.+.
T Consensus 185 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~ 226 (241)
T 1k1a_A 185 SALHSASGRGLLPLVRTLVRSGADSSLKNC-HNDTPLMVARSR 226 (241)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCTTTTCSSH
T ss_pred CHHHHHHHcCCHHHHHHHHhcCCCCCCcCC-CCCCHHHHHHhc
Confidence 5555555444444444444322 2345666 788888887654
No 48
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.10 E-value=9.1e-11 Score=98.57 Aligned_cols=54 Identities=22% Similarity=0.235 Sum_probs=28.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
+.+|.+|+||||+|+.+|+.+++++|+++.. ..++.+|.+|+||||+|+..++.
T Consensus 52 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~ 105 (223)
T 2f8y_A 52 NIQDNMGRTPLHAAVSADAQGVFQILIRNRA----TDLDARMHDGTTPLILAARLAVE 105 (223)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTT----SCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCCcHHHHHHHhCcH
Confidence 3445556666666666666666666655422 13444555555555555554443
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.09 E-value=1.6e-10 Score=98.29 Aligned_cols=107 Identities=13% Similarity=0.008 Sum_probs=78.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCC-CcccccccccCCCCcHHHHHHhcCCccccc---------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPL-YVPKWAARIDENGYTILHHVADMKHYEYGI---------------R 65 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~-~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~---------------~ 65 (283)
++.+|.+|+||||+|+.+|+.+++++|++.+.. .....++.+|.+|+||||+|+..++.+.+. .
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 150 (236)
T 1ikn_D 71 PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCN 150 (236)
T ss_dssp SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 467889999999999999999999999987542 123457888999999999999888865431 1
Q ss_pred CCChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 66 PGPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 66 ~g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
..++++.+...+..+.++.++..+ ..+.+|. +|.||.+++.+.
T Consensus 151 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~tpl~~A~~~ 194 (236)
T 1ikn_D 151 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTY-QGYSPYQLTWGR 194 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCT-TCCCGGGGCTTS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccC-CCCCHHHHHHcc
Confidence 236777776666666666555432 3456677 899999988654
No 50
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.09 E-value=6.5e-11 Score=102.67 Aligned_cols=101 Identities=11% Similarity=0.018 Sum_probs=67.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC-------------CCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR-------------PGP 68 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~-------------~g~ 68 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t 103 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHG-----AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS 103 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 4567888888888888888888888888763 4578888888888888888887654321 225
Q ss_pred hhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 69 VYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
++..+...+..+.++.++... ..+.++. +|.||..++.+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 143 (261)
T 2xai_A 104 PIHEAARRGHVECVNSLIAYGGNIDHKIS-HLGTPLYLACE 143 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCcCCC-CCCCHHHHHHH
Confidence 555555444444444443322 2344555 77888766543
No 51
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.09 E-value=4.7e-11 Score=90.30 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=48.4
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
++.+|.+|+||||+|+.+|+.+++++|+++ +..+|.+|.+|+||||+|+..++.
T Consensus 35 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~d~~g~tpl~~A~~~~~~ 88 (115)
T 2l6b_A 35 VNARSKDGNTPLHLAAKNGHAEIVKLLLAK-----GADVNARSKDGNTPEHLAKKNGHH 88 (115)
T ss_dssp SSCCCSSSCCTTHHHHTTTCHHHHHHHTTT-----TCCTTCCCTTCCCTTHHHHTTTCH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHHCCCH
Confidence 467899999999999999999999999886 346899999999999999988874
No 52
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.08 E-value=1.4e-10 Score=100.59 Aligned_cols=95 Identities=9% Similarity=-0.068 Sum_probs=57.3
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC-------------CCChhhhHH
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR-------------PGPVYQFQE 74 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~-------------~g~al~l~~ 74 (283)
+|+||||+|+.+|+.+++++|+++ +..+|.+|.+|+||||+|+..++.+.+.. ..++++.+.
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~ 174 (261)
T 2xai_A 100 DLASPIHEAARRGHVECVNSLIAY-----GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVA 174 (261)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHc-----CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHH
Confidence 344445555555555555554443 34577788888888888888777554321 236666665
Q ss_pred Hhhhhhhhhccccc-ccccccccccCCcccccccc
Q 041061 75 ELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 75 ~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
.....+.++.++.. ...+.+|+ +|+||.+++.+
T Consensus 175 ~~~~~~~v~~Ll~~gad~~~~d~-~g~tpl~~A~~ 208 (261)
T 2xai_A 175 RTASEELACLLMDFGADTQAKNA-EGKRPVELVPP 208 (261)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCT-TSCCGGGGSCT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCC-CCCChhhhccc
Confidence 55555555544433 23456777 89999998864
No 53
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.07 E-value=9.9e-11 Score=103.10 Aligned_cols=99 Identities=8% Similarity=-0.076 Sum_probs=65.6
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+..|.+|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..|+.+.+.. ..+
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t 127 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQG-----WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHT 127 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTT-----CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCC
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCC
Confidence 457889999999999999999999999863 4588999999999999999888654311 124
Q ss_pred hhhhHHHhhhhhhhhcccccccccccccccCCccccccc
Q 041061 69 VYQFQEELQWFECVKDIAPSHYTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~~~~~~n~~~G~T~~dl~~ 107 (283)
++..+...+..+.++.++........++ +|.||..++.
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~ 165 (285)
T 3d9h_A 128 PLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAA 165 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHH
Confidence 5555544444444444333222112233 5666655543
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.06 E-value=1.6e-10 Score=107.29 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=59.7
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+..|.+|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+
T Consensus 272 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t 346 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGHVPVADVLIKHG-----VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYS 346 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-----ccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCC
Confidence 344566666666666666666666666552 3467777777777777777776554311 225
Q ss_pred hhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 69 VYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
+++.+...+..+.++.++..+ ..+.+|. +|+||.+++.+.
T Consensus 347 ~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~-~g~t~l~~A~~~ 387 (437)
T 1n11_A 347 PLHQAAQQGHTDIVTLLLKNGASPNEVSS-DGTTPLAIAKRL 387 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCS-SSCCHHHHHHHT
T ss_pred HHHHHHHCChHHHHHHHHHCcCCCCCCCC-CCCCHHHHHHHc
Confidence 666655555555555444322 3345566 788888776544
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.06 E-value=1.3e-10 Score=100.12 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=61.3
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCC-------------CCcHHHHHHhcCCcccccCCCChh
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDEN-------------GYTILHHVADMKHYEYGIRPGPVY 70 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~-------------GnTpLHlAa~~~~~~~~~~~g~al 70 (283)
..|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+ |+||||+|+..++.+.
T Consensus 85 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~-------- 151 (256)
T 2etb_A 85 DEFYQGHSALHIAIEKRSLQCVKLLVENG-----ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDV-------- 151 (256)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHH--------
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcccccccccccccccccCCCCHHHHHHHcCCHHH--------
Confidence 45678999999999999999999999974 457888876 9999999999887432
Q ss_pred hhHHHhhhhhhhhcccc----cccccccccccCCcccccccc
Q 041061 71 QFQEELQWFECVKDIAP----SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 71 ~l~~~l~~~~~v~~~~~----~~~~~~~n~~~G~T~~dl~~~ 108 (283)
++.++. ....+.++. +|.||..++..
T Consensus 152 -----------v~~Ll~~~~~ga~~n~~d~-~g~TpLh~A~~ 181 (256)
T 2etb_A 152 -----------VTYLLENPHQPASLEATDS-LGNTVLHALVM 181 (256)
T ss_dssp -----------HHHHHHCSSCCCCTTCCCT-TSCCHHHHHHH
T ss_pred -----------HHHHHhccccCCCcCccCC-CCCCHHHHHHH
Confidence 222222 223456777 99999987754
No 56
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.06 E-value=9.3e-11 Score=101.11 Aligned_cols=81 Identities=22% Similarity=0.172 Sum_probs=62.0
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc--------------CCCCcHHHHHHhcCCcccccCCCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID--------------ENGYTILHHVADMKHYEYGIRPGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D--------------~~GnTpLHlAa~~~~~~~~~~~g~ 68 (283)
+..|.+|+||||+|+.+|+.+++++|++++ ..+|.+| .+|+||||+|+..|+.+.
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~------ 155 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKG-----ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI------ 155 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHH------
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCC-----CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHH------
Confidence 345669999999999999999999999974 4578887 689999999999887432
Q ss_pred hhhhHHHhhhhhhhhcccc----cccccccccccCCcccccccc
Q 041061 69 VYQFQEELQWFECVKDIAP----SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~----~~~~~~~n~~~G~T~~dl~~~ 108 (283)
++.++. ....+.+|. +|.||..++.+
T Consensus 156 -------------v~~Ll~~~~~ga~~~~~d~-~g~TpLh~A~~ 185 (260)
T 3jxi_A 156 -------------VHYLTENGHKQADLRRQDS-RGNTVLHALVA 185 (260)
T ss_dssp -------------HHHHHHCSSCCCCTTCCCT-TSCCHHHHHHH
T ss_pred -------------HHHHHhccccCCCCcccCC-CCCcHHHHHHH
Confidence 222222 223456777 99999988764
No 57
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.05 E-value=1.7e-10 Score=97.51 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=72.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++..|.+|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 107 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLG-----VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGC 107 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC-----CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCC
Confidence 3567899999999999999999999999863 4588999999999999999988665321 23
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
+++..+......+.++.++... ..+.++. +|.||...+.+
T Consensus 108 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 148 (231)
T 3aji_A 108 TPLHYAASKNRHEIAVMLLEGGANPDAKDH-YDATAMHRAAA 148 (231)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHH
Confidence 5666665555455444443322 2344555 78888766543
No 58
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.05 E-value=1.5e-10 Score=95.69 Aligned_cols=103 Identities=16% Similarity=0.072 Sum_probs=70.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC---------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---------------P 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---------------~ 66 (283)
++.+|..|+||||+|+.+|+.+++++|+++. +..++.+|.+|+||||+|+..++.+.+.. .
T Consensus 65 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 140 (201)
T 3hra_A 65 INLQNSISDSPYLYAGAQGRTEILAYMLKHA----TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG 140 (201)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS----CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTS
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc----CcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCC
Confidence 3567888999999999999999999998653 34678889999999999998887654321 2
Q ss_pred CChhhhHHHhhh-----hhhhhccccc-ccccccccccCCcccccccch
Q 041061 67 GPVYQFQEELQW-----FECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 67 g~al~l~~~l~~-----~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
.++++.+..... .+.++.++.. ...+.++. +|.||.+++.+.
T Consensus 141 ~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~ 188 (201)
T 3hra_A 141 YTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN-SGRTAMDYANQK 188 (201)
T ss_dssp CCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred CCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC-CCCCHHHHHHHc
Confidence 256655543322 3334443332 23456677 899999887554
No 59
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.04 E-value=1.3e-10 Score=103.79 Aligned_cols=80 Identities=19% Similarity=0.204 Sum_probs=62.5
Q ss_pred ccCCCChHHHHHHHh---CCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhh
Q 041061 5 VNQKGQTILHVAVRR---RRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFEC 81 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~---g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~ 81 (283)
.|.+|+||||+|+.. |+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-----advn~~d~~G~TpLh~A~~~g~~~~------------------- 241 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNG-----GHLDAKAADGNTALHYAALYNQPDC------------------- 241 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-----SCTTCCCTTCCCHHHHHHHTTCHHH-------------------
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcC-----CCCCCCCCCCCCHHHHHHHcCCHHH-------------------
Confidence 688999999999997 8999999999974 4689999999999999999887432
Q ss_pred hhcccc-cccccccccccCCcccccccch
Q 041061 82 VKDIAP-SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 82 v~~~~~-~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
++.++. ....+.+|. +|+||.+++.+.
T Consensus 242 v~~Ll~~gad~~~~d~-~G~TpL~~A~~~ 269 (301)
T 2b0o_E 242 LKLLLKGRALVGTVNE-AGETALDIARKK 269 (301)
T ss_dssp HHHHHHTTCCCSCCCT-TSCCHHHHHHHH
T ss_pred HHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 222221 123456777 899999887654
No 60
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.04 E-value=1.5e-10 Score=90.24 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=50.1
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.
T Consensus 36 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~ 91 (137)
T 3c5r_A 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQHK-----ALVNTTGYQNDSPLHDAAKNGHVDI 91 (137)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCGGGCCHHHHHHHTTCHHH
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CcccCcCCCCCCHHHHHHHcCCHHH
Confidence 4668899999999999999999999999863 4689999999999999999988654
No 61
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.04 E-value=1.6e-10 Score=88.46 Aligned_cols=79 Identities=18% Similarity=0.025 Sum_probs=58.0
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhc
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKD 84 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~ 84 (283)
.+..|+|+||+|+++|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+. ++.
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~-------------------v~~ 58 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG-----EDVNRTLEGGRKPLHYAADCGQLEI-------------------LEF 58 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT-----CCTTSCCTTSSCHHHHHHHTTCHHH-------------------HHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC-----CCcCccCCCCCcHHHHHHHcCCHHH-------------------HHH
Confidence 4678999999999999999999999864 4589999999999999999887432 222
Q ss_pred ccc-cccccccccccCCcccccccc
Q 041061 85 IAP-SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 85 ~~~-~~~~~~~n~~~G~T~~dl~~~ 108 (283)
++. ....+.+|. +|.||..++..
T Consensus 59 Ll~~g~~~~~~d~-~g~tpL~~A~~ 82 (123)
T 3aaa_C 59 LLLKGADINAPDK-HHITPLLSAVY 82 (123)
T ss_dssp HHTTTCCTTCCCT-TSCCHHHHHHH
T ss_pred HHHcCCCCCcCCC-CCCCHHHHHHH
Confidence 221 123455666 89999887654
No 62
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.04 E-value=1.8e-10 Score=103.56 Aligned_cols=87 Identities=15% Similarity=0.097 Sum_probs=60.8
Q ss_pred cccccCCCChHHHHHHH----hCCHHHHHHHHHhCCC---------------Cccc------------------------
Q 041061 2 LSTVNQKGQTILHVAVR----RRRHDIFQFIVEKMPL---------------YVPK------------------------ 38 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~----~g~~~iv~~Ll~~~~~---------------~~~~------------------------ 38 (283)
++.+|.+|+||||+|++ .|+.+++++|++.... ..+.
T Consensus 194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~ 273 (327)
T 1sw6_A 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIA 273 (327)
T ss_dssp GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHH
Confidence 46789999999999999 8999999999875210 0011
Q ss_pred -ccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhhccccc-ccccccccccCCcccccccc
Q 041061 39 -WAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 39 -~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~ 108 (283)
.+|.+|.+|+||||+|+..|+.+ .++.++.. ...+.+|+ +|+||.+++.+
T Consensus 274 ~~~n~~d~~G~TpLh~A~~~g~~~-------------------~v~~Ll~~Gad~~~~d~-~G~TpL~~A~~ 325 (327)
T 1sw6_A 274 NMLNAQDSNGDTCLNIAARLGNIS-------------------IVDALLDYGADPFIANK-SGLRPVDFGAG 325 (327)
T ss_dssp HTTTCCCTTSCCHHHHHHHHCCHH-------------------HHHHHHHTTCCTTCCCT-TSCCGGGGTCC
T ss_pred hCCCCCCCCCCCHHHHHHHcCCHH-------------------HHHHHHHcCCCCcccCC-CCCCHHHHHHh
Confidence 36777888888888888777632 23333322 23567777 99999998754
No 63
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.04 E-value=8.5e-11 Score=99.28 Aligned_cols=56 Identities=20% Similarity=0.178 Sum_probs=49.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|++.. +..+|.+|.+|+||||+|+..|+.+
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~----g~~~~~~d~~g~tpL~~A~~~~~~~ 154 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQP----NIELNQQNKLGDTALHAAAWKGYAD 154 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTST----TCCCCCCCTTSCCHHHHHHHHTCHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCC----CCCccccCCCCCCHHHHHHHcCCHH
Confidence 4678999999999999999999999998762 3568999999999999999998854
No 64
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.04 E-value=1.7e-10 Score=104.61 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=70.8
Q ss_pred ccccCCCChHHHHHHHhC--CHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccccc-------------C--
Q 041061 3 STVNQKGQTILHVAVRRR--RHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGI-------------R-- 65 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g--~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~-------------~-- 65 (283)
+..|.+|+||||+|+.+| +.+++++|++.+ ..+|.+|.+|+||||+|+..++.+.+. .
T Consensus 132 ~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-----a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 206 (364)
T 3ljn_A 132 HVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-----ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY 206 (364)
T ss_dssp EEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC
T ss_pred ccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc
Confidence 457788888888888888 888888888863 457888888888888888888755421 0
Q ss_pred ----CCChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 66 ----PGPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 66 ----~g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
..++++.+...+..+.++.++..+ ..+.+|+ +|.||.+++.+.
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~-~g~tpL~~A~~~ 254 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN-EHTVPLYLSVRA 254 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHh
Confidence 225666665555555555555432 3456677 899998887554
No 65
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.03 E-value=1.8e-10 Score=91.51 Aligned_cols=94 Identities=16% Similarity=0.042 Sum_probs=67.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChhhhH
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVYQFQ 73 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al~l~ 73 (283)
++.|+||.|+++|+.+++++|++++. .++ .|.+|+||||+|+..++.+.+.. ..+++..+
T Consensus 1 d~~~~L~~A~~~g~~~~v~~Ll~~g~-----~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 1 DLGKKLLEAARAGQDDEVRILMANGA-----PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMA 74 (153)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTC-----CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred CccHHHHHHHHcCCHHHHHHHHHcCC-----CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 35799999999999999999999754 233 69999999999999998664321 23567666
Q ss_pred HHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 74 EELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 74 ~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
...+..+.++.++... ..+.++. +|.||.+++.+
T Consensus 75 ~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 109 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGADVNAKDM-LKMTALHWATE 109 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHHH
T ss_pred HHcChHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHH
Confidence 6555555555554432 3445666 88999877654
No 66
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.03 E-value=2e-10 Score=102.53 Aligned_cols=101 Identities=17% Similarity=0.121 Sum_probs=74.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.+.. ..
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~ 125 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHG-----ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQF 125 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 4567899999999999999999999999873 4589999999999999999998765321 22
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
++++.+...+..+.++.++... .....+. +|.||.++...
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~~~l~~a~~ 166 (351)
T 3utm_A 126 TPLHEAASKNRVEVCSLLLSHGADPTLVNC-HGKSAVDMAPT 166 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHCSS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCcchHHHhh
Confidence 6676666555555555554332 2344555 78888776543
No 67
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.03 E-value=5.9e-11 Score=94.89 Aligned_cols=100 Identities=11% Similarity=-0.002 Sum_probs=71.8
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGP 68 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~ 68 (283)
+..++.|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+ .++.+.+.. ..+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~t 79 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAG-----ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLT 79 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTT-----CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCc
Confidence 456889999999999999999999999863 468999999999999985 676554310 235
Q ss_pred -hhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 69 -VYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 69 -al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
+++.+...+..+.++.++..+ ..+.++. +|.||.+++.+.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~tpl~~A~~~ 121 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARLDVRDA-WGRLPVDLAEEL 121 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TCCCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHHh
Confidence 787776666666666555432 3456666 899998877543
No 68
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.03 E-value=2.2e-10 Score=97.13 Aligned_cols=100 Identities=17% Similarity=0.119 Sum_probs=71.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 78 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAG-----ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGS 78 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSC
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 3678999999999999999999999999874 4588999999999999999988654321 12
Q ss_pred ChhhhHHHhhhhhhhhcccccc--cccccccccCCccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH--YTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~--~~~~~n~~~G~T~~dl~~ 107 (283)
+++..+...+..+.++.++... ..+..+. +|.||...+.
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L~~A~ 119 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPMIWAT 119 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT-TSCCHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCCHHHHHH
Confidence 4565555544455555544332 2334455 7788776554
No 69
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.03 E-value=2e-10 Score=99.05 Aligned_cols=100 Identities=21% Similarity=0.125 Sum_probs=72.0
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC---------------CC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---------------PG 67 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---------------~g 67 (283)
+..|.+|+||||+|+++|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 51 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 125 (253)
T 1yyh_A 51 NQTDRTGETALHLAARYSRSDAAKRLLEAS-----ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGT 125 (253)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC
Confidence 346899999999999999999999999863 4589999999999999999888654311 23
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
+++..+...+..+.++.++... ..+.++. +|.||..++.+
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~ 166 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSALHWAAA 166 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHTTCCTTCBCT-TSCBHHHHHHH
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 5666665555445555444322 2345555 78888777644
No 70
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.03 E-value=1.6e-10 Score=101.76 Aligned_cols=102 Identities=11% Similarity=0.019 Sum_probs=76.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC-------------CCC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR-------------PGP 68 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~-------------~g~ 68 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..+
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t 159 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHG-----AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS 159 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSC
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCC
Confidence 4678999999999999999999999999863 5689999999999999999998665321 236
Q ss_pred hhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 69 VYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
++..+...+..+.++.++... ..+.++. +|.||..++.+.
T Consensus 160 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~ 200 (285)
T 3d9h_A 160 PIHEAARRGHVECVNSLIAYGGNIDHKIS-HLGTPLYLACEN 200 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCBT-TTBCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHc
Confidence 676666555555555554332 3455666 899998776543
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.03 E-value=1.4e-10 Score=99.82 Aligned_cols=49 Identities=22% Similarity=0.352 Sum_probs=42.0
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcC
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMK 58 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~ 58 (283)
.|+||||+|+.+|+.+++++|+++.. .+..+|.+|.+|+||||+|+..+
T Consensus 135 ~g~tpL~~A~~~~~~~~v~~Ll~~~~--~ga~~n~~d~~g~TpLh~A~~~~ 183 (256)
T 2etb_A 135 FGELPLSLAACTKQWDVVTYLLENPH--QPASLEATDSLGNTVLHALVMIA 183 (256)
T ss_dssp SCSSHHHHHHHTTCHHHHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccc--cCCCcCccCCCCCCHHHHHHHcc
Confidence 39999999999999999999999311 14569999999999999999833
No 72
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.03 E-value=1.7e-10 Score=109.81 Aligned_cols=52 Identities=21% Similarity=0.308 Sum_probs=46.6
Q ss_pred cCCCChHHHHHHH---hCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 6 NQKGQTILHVAVR---RRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 6 D~~G~t~LH~Av~---~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
|.+|+||||+||. +|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-----a~vn~~d~~g~TpLh~A~~~g~~~~ 222 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNG-----GHLDAKAADGNTALHYAALYNQPDC 222 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-----CCTTCCCSSSCCHHHHHTTTTCHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcC-----CCCCccCCCCCcHHHHHHHcCCHHH
Confidence 8899999999977 89999999999974 5699999999999999999988543
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.02 E-value=2e-10 Score=99.88 Aligned_cols=79 Identities=24% Similarity=0.189 Sum_probs=61.4
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccC--------------CCCcHHHHHHhcCCcccccCCCChh
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDE--------------NGYTILHHVADMKHYEYGIRPGPVY 70 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~--------------~GnTpLHlAa~~~~~~~~~~~g~al 70 (283)
.|.+|+||||+|+.+|+.+++++|++++ ..+|.+|. +|+||||+|+..++.+.
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~-------- 163 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENG-----ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAI-------- 163 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH--------
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCcCccccccccccccccccccCCCCHHHHHHHcCCHHH--------
Confidence 6779999999999999999999999974 45777776 89999999999887432
Q ss_pred hhHHHhhhhhhhhcccc----cccccccccccCCcccccccc
Q 041061 71 QFQEELQWFECVKDIAP----SHYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 71 ~l~~~l~~~~~v~~~~~----~~~~~~~n~~~G~T~~dl~~~ 108 (283)
++.++. ....+.++. +|.||..++.+
T Consensus 164 -----------v~~Ll~~~~~gad~~~~d~-~g~tpLh~A~~ 193 (273)
T 2pnn_A 164 -----------VKFLLQNSWQPADISARDS-VGNTVLHALVE 193 (273)
T ss_dssp -----------HHHHHHCSSCCCCTTCCCT-TSCCHHHHHHH
T ss_pred -----------HHHHHhcccCCCCceeeCC-CCCcHHHHHHH
Confidence 222222 223456777 99999988754
No 74
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.02 E-value=1.6e-10 Score=101.27 Aligned_cols=100 Identities=17% Similarity=0.114 Sum_probs=70.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|++|+||||+|+.+|+.+++++|++.+ ..++.+|.+|+||+|.|+..++.+.+.. ..
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~-----a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~ 153 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHG-----ANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGN 153 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCC
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcC-----CCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCC
Confidence 4677889999999999999999999998863 4578889999999999998887554210 23
Q ss_pred ChhhhHHHhhhhhhhhccccc-ccccccccccCCccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFN 107 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~ 107 (283)
+++..+...+..+.++.++.. ...+.++. +|.||..++.
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~-~g~t~Lh~A~ 193 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGASINASNN-KGNTALHEAV 193 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCCTTCBCT-TSCBHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCcccc-CCCcHHHHHH
Confidence 566666555555555554432 23445565 7888876654
No 75
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.02 E-value=2.4e-10 Score=100.27 Aligned_cols=96 Identities=8% Similarity=0.005 Sum_probs=45.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChhhhH
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVYQFQ 73 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al~l~ 73 (283)
+|.|+||.|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.+.. ..++++.+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERG-----ADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA 113 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHC-----CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 4445555555555555555554432 2244445555555555554444332210 11334333
Q ss_pred HHhhhhhhhhccccc-ccccccccccCCcccccccch
Q 041061 74 EELQWFECVKDIAPS-HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 74 ~~l~~~~~v~~~~~~-~~~~~~n~~~G~T~~dl~~~~ 109 (283)
...+..+.++.++.. ......+. +|.||.+++...
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 149 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHVGAVNS-EGDTPLDIAEEE 149 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHCCSH
T ss_pred HHcCCHHHHHHHHhCCCCCCCcCC-CCCCHHHHHHhc
Confidence 333334444443332 22345666 899998877543
No 76
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.02 E-value=2.5e-10 Score=89.06 Aligned_cols=55 Identities=18% Similarity=0.142 Sum_probs=49.1
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..++.+|.+|+||||+|+..++.+
T Consensus 73 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~tpl~~A~~~~~~~ 127 (136)
T 2jab_A 73 VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG-----ADVNAQDKFGKTAFDISIGNGNED 127 (136)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcCcCCCCCCHHHHHHHCCCHH
Confidence 4678999999999999999999999999863 458999999999999999988743
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.02 E-value=9.2e-11 Score=97.41 Aligned_cols=93 Identities=11% Similarity=-0.132 Sum_probs=63.0
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCccccccccc-CCCCcHHHHHHhcCCcc----ccc--------------CCCC
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARID-ENGYTILHHVADMKHYE----YGI--------------RPGP 68 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D-~~GnTpLHlAa~~~~~~----~~~--------------~~g~ 68 (283)
.+.++||.|++.|+.+.++.+++.. +|.+| .+|+||||+|+.+++.+ .+. ...+
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~-------~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~T 77 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKG-------YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTT 77 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHS-------SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCC
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcC-------cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCc
Confidence 3678999999999999999987753 45566 88999999999988643 211 0236
Q ss_pred hhhhHHHhhh------hhhhhccccc-ccccccccccCC-cccccccc
Q 041061 69 VYQFQEELQW------FECVKDIAPS-HYTMHRDTRKNM-TAGDLFNR 108 (283)
Q Consensus 69 al~l~~~l~~------~~~v~~~~~~-~~~~~~n~~~G~-T~~dl~~~ 108 (283)
+++.+..... .+.++.++.. ...+.+++ +|. ||...+..
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~-~g~ttpLh~A~~ 124 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADITALYK-PYKIVVFKNIFN 124 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBG-GGTBCTTGGGGG
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCC-CcCchHHHHHHH
Confidence 7766543322 2234444332 34567777 899 99887755
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.02 E-value=2.4e-10 Score=89.15 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=40.5
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCC-CCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDEN-GYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~-GnTpLHlAa~~~~~~~ 62 (283)
++.+|.+|+||||+|+. |+.+++++|++++ ..+|.+|.+ |+||||+|+..++.+.
T Consensus 38 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~~~~~~ 93 (136)
T 1d9s_A 38 PNALNRFGRRPIQVMMM-GSAQVAELLLLHG-----AEPNCADPATLTRPVHDAAREGFLDT 93 (136)
T ss_dssp TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-----CCSSCCBTTTTBCHHHHHHHHTCHHH
T ss_pred cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-----CCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 35567778888888888 8888888887763 347777777 7888888887776554
No 79
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.02 E-value=1.7e-10 Score=99.46 Aligned_cols=51 Identities=22% Similarity=0.276 Sum_probs=44.3
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
.+|+||||+|+.+|+.+++++|++.+. .+..+|.+|.+|+||||+|+..++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~--~ga~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGH--KQADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccc--cCCCCcccCCCCCcHHHHHHHhcc
Confidence 689999999999999999999999321 145699999999999999998765
No 80
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.01 E-value=2.3e-10 Score=100.86 Aligned_cols=55 Identities=22% Similarity=0.274 Sum_probs=49.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|+++ ++.+|.+|.+|+||||+|+..++.+
T Consensus 198 in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-----gad~~~~d~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 198 LDKQTGKGSTALHYCCLTDNAECLKLLLRG-----KASIEIANESGETPLDIAKRLKHEH 252 (278)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHc-----CCCCCCccCCCCCHHHHHHHcCCHH
Confidence 567899999999999999999999999986 4569999999999999999988743
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.00 E-value=1.4e-10 Score=101.77 Aligned_cols=102 Identities=15% Similarity=0.117 Sum_probs=74.0
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhc-----CCccccc------------
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADM-----KHYEYGI------------ 64 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~-----~~~~~~~------------ 64 (283)
++.+|.+|+||||+|+.+|+.+++++|++.+. ..+|.+|.+|.||||+|+.. ++.+.+.
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~----~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~ 179 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGV----CKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKA 179 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSC----CCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC----CcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcccc
Confidence 57789999999999999999999999999743 26899999999999999943 2221110
Q ss_pred --CCCChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 65 --RPGPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 65 --~~g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
...+++..+...+..+.++.++..+ ..+.+|. +|.||..++.+
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G~TpLh~A~~ 225 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DGSTALMCACE 225 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHHHHHH
Confidence 1236777776666566666555432 3456677 89999887644
No 82
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.99 E-value=3.4e-10 Score=95.24 Aligned_cols=56 Identities=27% Similarity=0.399 Sum_probs=37.9
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCccccccc-ccCCCCcHHHHHHhcCCccc
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAAR-IDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~-~D~~GnTpLHlAa~~~~~~~ 62 (283)
.+|.+|+||||+|+.+|+.+++++|++++. ...++. +|.+|+||||+|+..++.+.
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~ 87 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLSKME---NVNLDDYPDDSGWTPFHIACSVGNLEV 87 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTCT---TCCGGGCCCTTSCCHHHHHHHHCCHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhccc---cccccccCCCCCCCHHHHHHHcCCHHH
Confidence 467777777777777777777777777642 123444 67777777777777666443
No 83
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=98.99 E-value=3.1e-10 Score=101.29 Aligned_cols=54 Identities=22% Similarity=0.324 Sum_probs=49.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
++.+|.+|+||||+|+.+|+.+++++|++. ++.+|.+|.+|+||||+|+..++.
T Consensus 219 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-----gad~~~~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 219 LDAKAADGNTALHYAALYNQPDCLKLLLKG-----RALVGTVNEAGETALDIARKKHHK 272 (301)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----TCCCSCCCTTSCCHHHHHHHHTCH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCH
Confidence 467899999999999999999999999986 356899999999999999998874
No 84
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.99 E-value=4.7e-10 Score=90.70 Aligned_cols=57 Identities=25% Similarity=0.239 Sum_probs=50.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+
T Consensus 73 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v 129 (169)
T 2y1l_E 73 VNAVDHAGMTPLRLAALFGHLEIVEVLLKNG-----ADVNANDMEGHTPLHLAAMFGHLEIV 129 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 4567899999999999999999999999864 45899999999999999999886543
No 85
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.98 E-value=2.8e-10 Score=90.40 Aligned_cols=95 Identities=9% Similarity=0.007 Sum_probs=69.3
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CCChhhhH
Q 041061 8 KGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PGPVYQFQ 73 (283)
Q Consensus 8 ~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g~al~l~ 73 (283)
+|.|+||.|+++|+.+++++|+++. +..+|.+|.+|+||||+ +..++.+.+.. ..+++..+
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRE----LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDA 75 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTT----CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhh----CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 4679999999999999999999872 34689999999999999 87887654321 23667766
Q ss_pred HHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 74 EELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 74 ~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
...+..+.++.++..+ ..+.++. +|.||..++.+
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 110 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADVNVPDG-TGALPIHLAVQ 110 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHH
Confidence 6555555555554332 3445666 89999877654
No 86
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.98 E-value=4e-10 Score=91.87 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=50.7
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~d~~g~t~L~~A~~~~~~~~v 121 (179)
T 3f6q_A 65 INVMNRGDDTPLHLAASHGHRDIVQKLLQYK-----ADINAVNEHGNVPLHYACFWGQDQVA 121 (179)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 4668899999999999999999999999874 56899999999999999999886653
No 87
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.98 E-value=3.9e-10 Score=103.59 Aligned_cols=82 Identities=20% Similarity=0.108 Sum_probs=61.1
Q ss_pred cccc--CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhh
Q 041061 3 STVN--QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFE 80 (283)
Q Consensus 3 e~~D--~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~ 80 (283)
+..| .+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.
T Consensus 227 n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-----advn~~d~~G~TpLh~A~~~g~~~~------------------ 283 (368)
T 3jue_A 227 NWVNGGQDNATPLIQATAANSLLACEFLLQNG-----ANVNQADSAGRGPLHHATILGHTGL------------------ 283 (368)
T ss_dssp TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHH------------------
T ss_pred CccccccCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCcHHH------------------
Confidence 4455 88999999999999999999999873 5689999999999999999887432
Q ss_pred hhhcccc-cccccccccccCCcccccccch
Q 041061 81 CVKDIAP-SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 81 ~v~~~~~-~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
++.++. ....+.+|. +|.||.+++.+.
T Consensus 284 -v~~LL~~Gad~~~~d~-~G~TpL~~A~~~ 311 (368)
T 3jue_A 284 -ACLFLKRGADLGARDS-EGRDPLTIAMET 311 (368)
T ss_dssp -HHHHHHTTCCTTCCCT-TSCCHHHHHHHT
T ss_pred -HHHHHHCcCCCCCcCC-CCCCHHHHHHHC
Confidence 111111 123455666 888888876543
No 88
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.98 E-value=4.5e-10 Score=95.44 Aligned_cols=101 Identities=19% Similarity=0.152 Sum_probs=72.1
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccC-CCCcHHHHHHhcCCcccccC--------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDE-NGYTILHHVADMKHYEYGIR--------------P 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~-~GnTpLHlAa~~~~~~~~~~--------------~ 66 (283)
++..|.+|+||||+|+.+|+.+++++|++++ ..+|.+|. +|+||||+|+..++.+.+.. .
T Consensus 110 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 184 (236)
T 1ikn_D 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLG-----ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG 184 (236)
T ss_dssp GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTC
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCC
Confidence 4678899999999999999999999999874 46899998 99999999999998665421 2
Q ss_pred CChhhhHHHhhhhhhhhccccccc---ccccccccCCcccccccc
Q 041061 67 GPVYQFQEELQWFECVKDIAPSHY---TMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~~~~~~~---~~~~n~~~G~T~~dl~~~ 108 (283)
.++++.+...+..+.++.++..+. ....+. +|+|+.|...+
T Consensus 185 ~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~-~~~~~~~~~~~ 228 (236)
T 1ikn_D 185 YSPYQLTWGRPSTRIQQQLGQLTLENLQMLPES-EDEESYDTESE 228 (236)
T ss_dssp CCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCC-CTTTCCCCC--
T ss_pred CCHHHHHHccCchHHHHHHHHcchhhhhcCCcc-chHHHHhhhcc
Confidence 366666554444444444433322 234555 88898876543
No 89
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.97 E-value=4.7e-10 Score=90.00 Aligned_cols=56 Identities=21% Similarity=0.242 Sum_probs=50.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~ 123 (165)
T 3twr_A 68 VHAKDKGGLVPLHNACSYGHYEVAELLVKHG-----AVVNVADLWKFTPLHEAAAKGKYEI 123 (165)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCccCCCCCCHHHHHHHcCcHHHHHHHHhCC-----CCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 4678999999999999999999999999863 5689999999999999999988654
No 90
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=98.97 E-value=3.2e-10 Score=98.65 Aligned_cols=51 Identities=22% Similarity=0.294 Sum_probs=44.2
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCC
Q 041061 7 QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKH 59 (283)
Q Consensus 7 ~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~ 59 (283)
.+|+||||+|+.+|+.+++++|+++.. .+..+|.+|.+|+||||+|+..++
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~--~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSW--QPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccc--CCCCceeeCCCCCcHHHHHHHccC
Confidence 489999999999999999999999310 145699999999999999998776
No 91
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.97 E-value=6.5e-10 Score=89.37 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=49.9
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
++.+|..|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..++.+.+
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v 118 (167)
T 3v31_A 62 PQLLGKGRESALSLACSKGYTDIVKMLLDCG-----VDVNEYDWNGGTPLLYAVHGNHVKCV 118 (167)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCC-----CCCCcCCCCCCCHHHHHHHcCCHHHH
Confidence 3567899999999999999999999999874 45899999999999999999886643
No 92
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.96 E-value=2.4e-10 Score=100.71 Aligned_cols=52 Identities=21% Similarity=0.215 Sum_probs=25.1
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCC-CcHHHHHHhcCCc
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENG-YTILHHVADMKHY 60 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~G-nTpLHlAa~~~~~ 60 (283)
.+|.+|+||||+|+.+|+.+++++|+++ +..+|.+|.+| +||||+|+..++.
T Consensus 90 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~g~~t~L~~A~~~~~~ 142 (285)
T 3kea_A 90 QFDDKGNTALYYAVDSGNMQTVKLFVKK-----NWRLMFYGKTGWKTSFYHAVMLNDV 142 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHH-----CGGGGGCSSSGGGSHHHHHHHTTCH
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhc-----CCCCCccCCCCCCCHHHHHHHcCCH
Confidence 3444455555555555555555555444 22344555555 4555555544443
No 93
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.95 E-value=8.7e-10 Score=100.80 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=63.3
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhh
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFEC 81 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~ 81 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----a~~~~~~~~g~t~L~~A~~~g~~~~------------------- 214 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAG-----ADPTIYNKSERSALHQAAANRDFGM------------------- 214 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTCCCHHHHHHHTTCHHH-------------------
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCC-----CCCcccCCCCCCHHHHHHHCCCHHH-------------------
Confidence 4678999999999999999999999999873 5689999999999999999887432
Q ss_pred hhccccc----ccccccccccCCcccccccc
Q 041061 82 VKDIAPS----HYTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 82 v~~~~~~----~~~~~~n~~~G~T~~dl~~~ 108 (283)
++.++.. ...+..+. +|.||..++..
T Consensus 215 v~~Ll~~~~~~~~~~~~d~-~g~t~L~~A~~ 244 (373)
T 2fo1_E 215 MVYMLNSTKLKGDIEELDR-NGMTALMIVAH 244 (373)
T ss_dssp HHHHTTSHHHHHTTSCCCT-TSCCHHHHHHH
T ss_pred HHHHHhcCccccChhhcCC-CCCCHHHHHHH
Confidence 2222221 12345566 89999877644
No 94
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.95 E-value=7.5e-10 Score=88.33 Aligned_cols=78 Identities=19% Similarity=0.090 Sum_probs=60.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC---------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---------------P 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---------------~ 66 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. .
T Consensus 63 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 137 (162)
T 1ihb_A 63 PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ-----ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKG 137 (162)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCC
Confidence 4567899999999999999999999999863 4689999999999999999988665321 2
Q ss_pred CChhhhHHHhhhhhhhhc
Q 041061 67 GPVYQFQEELQWFECVKD 84 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~ 84 (283)
.++++.+...+..+.++.
T Consensus 138 ~t~l~~A~~~~~~~~~~~ 155 (162)
T 1ihb_A 138 DTACDLARLYGRNEVVSL 155 (162)
T ss_dssp CCHHHHHHHTTCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHH
Confidence 367777665555554443
No 95
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=98.95 E-value=4.9e-10 Score=98.72 Aligned_cols=99 Identities=9% Similarity=-0.016 Sum_probs=68.1
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+ +|+||||+|+..|+.+.+.. ..
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 96 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAG-----ALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGN 96 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----GGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCC-----CCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 4678999999999999999999999999863 446666 48999999998888665321 22
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccC-Ccccccccc
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKN-MTAGDLFNR 108 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G-~T~~dl~~~ 108 (283)
+++..+...+..+.++.++..+ ..+.++. +| .||..++..
T Consensus 97 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~ 138 (285)
T 3kea_A 97 TALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVM 138 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHH
Confidence 5666665555555555444332 2344555 66 788766543
No 96
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=98.95 E-value=7.6e-10 Score=92.86 Aligned_cols=103 Identities=15% Similarity=0.142 Sum_probs=77.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.+.+.. ..
T Consensus 85 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 85 LDARMHDGTTPLILAARLAVEGMLEDLINSH-----ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred cccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-----CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCc
Confidence 3567889999999999999999999999863 4588999999999999999888665321 23
Q ss_pred ChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccchh
Q 041061 68 PVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRTH 110 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~~ 110 (283)
++++.+...+..+.++.++... ..+.+|. +|.||.+++.+..
T Consensus 160 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 160 TPLFLAAREGSYETAKVLLDHFANRDITDH-MDRLPRDIAQERM 202 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccc-cCCCHHHHHHHhc
Confidence 6777776666566665554432 3456677 8999999876543
No 97
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.94 E-value=4.2e-10 Score=102.92 Aligned_cols=82 Identities=23% Similarity=0.230 Sum_probs=64.1
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhhhhh
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFECVK 83 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~~v~ 83 (283)
..|.+|+||||+|+.+|+.+++++|+++++ ..+|.+|.+|+||||+|+..|+.+. ++
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~----~~~n~~d~~g~TpL~~A~~~g~~~i-------------------v~ 330 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKG----SNKDKQDEDGKTPIMLAAQEGRIEV-------------------VM 330 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHSC----CCTTCCCTTCCCHHHHHHHHTCHHH-------------------HH
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHHhcC----CCccCcCCCCCCHHHHHHHcCCHHH-------------------HH
Confidence 467899999999999999999999998742 5689999999999999999987432 22
Q ss_pred cccc-cccccccccccCCcccccccch
Q 041061 84 DIAP-SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 84 ~~~~-~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
.++. ....+.+|. +|+||.+++.+.
T Consensus 331 ~Ll~~gad~~~~d~-~g~t~l~~A~~~ 356 (373)
T 2fo1_E 331 YLIQQGASVEAVDA-TDHTARQLAQAN 356 (373)
T ss_dssp HHHHTTCCSSCCCS-SSCCHHHHHHHT
T ss_pred HHHHcCCCccCCCC-CCCCHHHHHHHc
Confidence 2221 123456777 899999987654
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.94 E-value=1.1e-09 Score=89.87 Aligned_cols=54 Identities=26% Similarity=0.270 Sum_probs=47.2
Q ss_pred ccccc-CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc
Q 041061 2 LSTVN-QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY 60 (283)
Q Consensus 2 ie~~D-~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~ 60 (283)
++.+| .+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..++.
T Consensus 102 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 102 LDHRDMRGGLTALHMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHHHHHHHT
T ss_pred CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC-----CCCcCCCCCCCCHHHHHHHhccC
Confidence 34566 88999999999999999999999874 46899999999999999987653
No 99
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.94 E-value=2.8e-10 Score=103.12 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=58.6
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC------------CCChh
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR------------PGPVY 70 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~------------~g~al 70 (283)
+..|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+.+.. ..+++
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g-----~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L 88 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETG-----VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPI 88 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHH
Confidence 567889999999999999999999999863 4589999999999999999998765421 22566
Q ss_pred hhHHHhhhhhhhhcc
Q 041061 71 QFQEELQWFECVKDI 85 (283)
Q Consensus 71 ~l~~~l~~~~~v~~~ 85 (283)
..+...+..+.++.+
T Consensus 89 ~~A~~~g~~~~v~~L 103 (364)
T 3ljn_A 89 HLAVMANKTDLVVAL 103 (364)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHH
Confidence 665544444444433
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.93 E-value=9.3e-10 Score=83.55 Aligned_cols=77 Identities=25% Similarity=0.283 Sum_probs=58.9
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC--------------CC
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR--------------PG 67 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~--------------~g 67 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..++.+|.+|+||||+|+..++.+.+.. ..
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 102 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR 102 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-----CCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCC
Confidence 3567899999999999999999999999863 4588999999999999999888665321 23
Q ss_pred ChhhhHHHhhhhhhhh
Q 041061 68 PVYQFQEELQWFECVK 83 (283)
Q Consensus 68 ~al~l~~~l~~~~~v~ 83 (283)
++++.+...+..+.++
T Consensus 103 t~l~~A~~~~~~~~~~ 118 (126)
T 1n0r_A 103 TPLHLAARNGHLEVVK 118 (126)
T ss_dssp CHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHcCcHHHHH
Confidence 5666665544444444
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.92 E-value=6.9e-10 Score=99.46 Aligned_cols=57 Identities=21% Similarity=0.277 Sum_probs=47.0
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY 62 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~ 62 (283)
++.+|.+|+||||+|++.|+.++++.|++.. +..+|.+|.+|+||||+|+..|+.+.
T Consensus 232 ~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~----~~~vn~~d~~G~TpL~~A~~~g~~~i 288 (337)
T 4g8k_A 232 VNVRGERGKTPLILAVEKKHLGLVQRLLEQE----HIEINDTDSDGKTALLLAVELKLKKI 288 (337)
T ss_dssp TTCCCGGGCCHHHHHHHTTCHHHHHHHHTST----TCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc----CCcccCcCCCCCCHHHHHHHcCCHHH
Confidence 4567888999999999999999999988753 35688999999999999998887543
No 102
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=98.92 E-value=8.2e-10 Score=102.38 Aligned_cols=54 Identities=24% Similarity=0.140 Sum_probs=25.3
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
+..|++|+||||+|+.+|+.+++++|++++ ..+|.+|.+|+||||+|+..|+.+
T Consensus 8 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g-----~~~~~~~~~~~t~L~~A~~~g~~~ 61 (437)
T 1n11_A 8 GGGGESGLTPLHVASFMGHLPIVKNLLQRG-----ASPNVSNVKVETPLHMAARAGHTE 61 (437)
T ss_dssp -------CCHHHHHHHHTCHHHHHHHHHTT-----CCSCCSSSCCCCHHHHHHHHTCHH
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcCCHH
Confidence 344555666666666666666666655542 234455555555555555555443
No 103
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.89 E-value=1.5e-09 Score=93.78 Aligned_cols=101 Identities=16% Similarity=0.099 Sum_probs=73.9
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc----cccc--------------C
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY----EYGI--------------R 65 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~----~~~~--------------~ 65 (283)
..|..|+||||+|+.+|+.+++++|+++. +..+|.+|.+|+||||.|+..++. +.+. .
T Consensus 143 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~----~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~ 218 (285)
T 1wdy_A 143 RLRKGGATALMDAAEKGHVEVLKILLDEM----GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218 (285)
T ss_dssp HTTCCCCCHHHHHHHHTCHHHHHHHHHTS----CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTT
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHhc----CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCC
Confidence 45889999999999999999999999862 356899999999999999988873 2210 0
Q ss_pred CCChhhhHHHhhhhhhhhcccc--cccccccccccCCcccccccch
Q 041061 66 PGPVYQFQEELQWFECVKDIAP--SHYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 66 ~g~al~l~~~l~~~~~v~~~~~--~~~~~~~n~~~G~T~~dl~~~~ 109 (283)
..++++.+...+..+.++.++. ....+.+|. +|+||.+++.+.
T Consensus 219 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~-~g~t~l~~A~~~ 263 (285)
T 1wdy_A 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLAVEL 263 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT-TSCCHHHHHHHT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhccCCCccccCC-CCCcHHHHHHHc
Confidence 2367777666565666666554 223456677 899998887554
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.89 E-value=1.3e-09 Score=100.23 Aligned_cols=55 Identities=13% Similarity=0.139 Sum_probs=49.8
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|+++ +..+|.+|.+|+||||+|+..++.+
T Consensus 261 vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~-----Gad~~~~d~~G~TpL~~A~~~g~~~ 315 (368)
T 3jue_A 261 VNQADSAGRGPLHHATILGHTGLACLFLKR-----GADLGARDSEGRDPLTIAMETANAD 315 (368)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCCCCCCHHHHHHHcCcHHHHHHHHHC-----cCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 567899999999999999999999999987 3568999999999999999988754
No 105
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.86 E-value=1.5e-09 Score=92.72 Aligned_cols=55 Identities=27% Similarity=0.311 Sum_probs=49.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|++.+ ..+|.+|.+|+||||+|+..|+.+
T Consensus 47 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-----a~~n~~d~~g~tpLh~A~~~g~~~ 101 (229)
T 2vge_A 47 PSQPNEEGITALHNAICGANYSIVDFLITAG-----ANVNSPDSHGWTPLHCAASCNDTV 101 (229)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHcCCHH
Confidence 4678999999999999999999999999873 568999999999999999988754
No 106
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.85 E-value=3.2e-09 Score=89.40 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=59.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCc-cccc---------------CC
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHY-EYGI---------------RP 66 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~-~~~~---------------~~ 66 (283)
+.+|..|+||||+|+.+|+.+++++|++++ ..++.+|.+|+||||+|+..++. +... ..
T Consensus 103 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-----~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g 177 (240)
T 3eu9_A 103 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-----QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHK 177 (240)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTC
T ss_pred cccCCCCCCHHHHHHHcCHHHHHHHHHhcC-----CCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCC
Confidence 345666777777777777777777776652 34677777777777777755542 1110 01
Q ss_pred CChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccch
Q 041061 67 GPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~~ 109 (283)
.++++.+...+..+.++.++..+ ..+.++. +|+||.+++.+.
T Consensus 178 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~ 220 (240)
T 3eu9_A 178 NTALHWAVLAGNTTVISLLLEAGANVDAQNI-KGESALDLAKQR 220 (240)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCBCT-TSCBHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHc
Confidence 25566655555455454444322 2345566 788888876554
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.85 E-value=1.4e-09 Score=103.51 Aligned_cols=57 Identities=23% Similarity=0.320 Sum_probs=51.6
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
++.+|.+|+||||+|+.+|+.+++++|+++ ++.+|.+|.+|+||||+|+..|+.+.+
T Consensus 200 vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-----ga~~~~~d~~g~tpl~~A~~~~~~~~~ 256 (497)
T 3lvq_E 200 LDAKAADGNTALHYAALYNQPDCLKLLLKG-----RALVGTVNEAGETALDIARKKHHKECE 256 (497)
T ss_dssp TTCCCSSSCCHHHHHTTTTCHHHHHHHHHT-----CCCCSCCCTTCCCHHHHHHHTTCHHHH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 577899999999999999999999999987 456999999999999999999986653
No 108
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.85 E-value=2.5e-09 Score=92.33 Aligned_cols=53 Identities=25% Similarity=0.183 Sum_probs=42.4
Q ss_pred cCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 6 NQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 6 D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
|..|+||||+|+++|+.+++++|++++ ..++.+|.+|+||||+|+..++.+.+
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v 88 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHG-----ADPVLRKKNGATPFLLAAIAGSVKLL 88 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 677888888888888888888888763 45778888888888888888876543
No 109
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.80 E-value=6.9e-09 Score=89.26 Aligned_cols=70 Identities=23% Similarity=0.236 Sum_probs=54.4
Q ss_pred cccc-CCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccCCCChhhhHHHhhhhh
Q 041061 3 STVN-QKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIRPGPVYQFQEELQWFE 80 (283)
Q Consensus 3 e~~D-~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~~g~al~l~~~l~~~~ 80 (283)
+.+| .+|+||||+|+.+|+.+++++|+++ +..+|.+|.+|+||||+|+..++... ..++++.+...+..+
T Consensus 104 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~d~~g~t~l~~A~~~~~~~~---~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 104 DHRDMRGGLTALHMAAGYVRPEVVEALVEL-----GADIEVEDERGLTALELAREILKTTP---KGNPMQFGRRIGLEK 174 (244)
T ss_dssp TCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHHHTTCC---CSSHHHHHHHHHHHH
T ss_pred CcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCcHHHHHHHHHhccC---CCCHHHHHHHcChHH
Confidence 4566 7899999999999999999999987 35689999999999999997654321 335666655544443
No 110
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.77 E-value=5.9e-09 Score=93.33 Aligned_cols=101 Identities=16% Similarity=0.099 Sum_probs=70.6
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCccc---c----c-----------C
Q 041061 4 TVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEY---G----I-----------R 65 (283)
Q Consensus 4 ~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~---~----~-----------~ 65 (283)
..|..|+||||+|+++|+.+++++|+++. +..+|.+|.+|+||||.++..++... + . .
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~----gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~ 238 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEM----GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 238 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHS----CCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGG
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhcc----CCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCC
Confidence 45778999999999999999999999763 45688999999999998876554221 1 0 0
Q ss_pred CCChhhhHHHhhhhhhhhccccc--ccccccccccCCcccccccch
Q 041061 66 PGPVYQFQEELQWFECVKDIAPS--HYTMHRDTRKNMTAGDLFNRT 109 (283)
Q Consensus 66 ~g~al~l~~~l~~~~~v~~~~~~--~~~~~~n~~~G~T~~dl~~~~ 109 (283)
..+++..+...+..+.++.++.. ...+.+|+ +|.||+.++.+.
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~-~G~TpL~~A~~~ 283 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLAVEL 283 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCT-TSCBHHHHHHHT
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCC-CCCCHHHHHHHc
Confidence 22566666555555566655543 34566777 899998876543
No 111
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.76 E-value=1.3e-08 Score=87.09 Aligned_cols=55 Identities=16% Similarity=0.176 Sum_probs=47.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCC-cHHHHH--HhcCCcc
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGY-TILHHV--ADMKHYE 61 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~Gn-TpLHlA--a~~~~~~ 61 (283)
++.+|.+|+||||+|+.+|+.+++++|++++ ..+|.+|.+|. ||||+| +..|+.+
T Consensus 96 ~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~t~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 96 VNAADSDGWTPLHCAASCNNVQVCKFLVESG-----AAVFAMTYSDMQTAADKCEEMEEGYTQ 153 (239)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCSSSCCCHHHHCCSSSTTCCC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcceecCCCCcchHHHHHHhhhccHH
Confidence 4678999999999999999999999999874 56899998887 999999 5556544
No 112
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.74 E-value=5.6e-09 Score=87.89 Aligned_cols=101 Identities=11% Similarity=0.010 Sum_probs=69.2
Q ss_pred cccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC---------------C
Q 041061 2 LSTVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---------------P 66 (283)
Q Consensus 2 ie~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---------------~ 66 (283)
++..|+.|.|+||.|+++|+.+++++|++.+ ..++.+|.+|+||||+|+..++.+.+.. .
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 76 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAG-----YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLN 76 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcC-----CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcC
Confidence 3567889999999999999999999998863 4578889999999999999888654321 1
Q ss_pred CChhhhHHHhhhhhhhhcccccc-cccccccccCCcccccccc
Q 041061 67 GPVYQFQEELQWFECVKDIAPSH-YTMHRDTRKNMTAGDLFNR 108 (283)
Q Consensus 67 g~al~l~~~l~~~~~v~~~~~~~-~~~~~n~~~G~T~~dl~~~ 108 (283)
.+++..+...+..+.++.++... ....++. +|.||...+..
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~ 118 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSLIDG-EGCSCIHLAAQ 118 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHHHHHHH
Confidence 25555555444455555444322 2334455 77888766543
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.37 E-value=2e-08 Score=92.40 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=58.8
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccccC---CC-------------C
Q 041061 5 VNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYGIR---PG-------------P 68 (283)
Q Consensus 5 ~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~~~---~g-------------~ 68 (283)
.+.+++||||+|+++|+.+++++|++++.. ....+..|.+|+||||+|+..|+.+.+.. .| +
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~--~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~T 165 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTS--DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYH 165 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--C--CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCc--HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCC
Confidence 455677888888888888888888776431 12234556678888888888888665421 22 2
Q ss_pred hhhhHHHhhhhhhhhccccccc-ccc--cccccCCccccccc
Q 041061 69 VYQFQEELQWFECVKDIAPSHY-TMH--RDTRKNMTAGDLFN 107 (283)
Q Consensus 69 al~l~~~l~~~~~v~~~~~~~~-~~~--~n~~~G~T~~dl~~ 107 (283)
++..+...+..+.++.++..+. ... .+. +|.||..++.
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~-~g~TpL~~Aa 206 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEATAMIQA-ENYYAFRWAA 206 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccchhccCC-CCCCHHHHHH
Confidence 3333333444445554443321 112 455 7888887765
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.14 E-value=3e-07 Score=84.52 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=32.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHHhCCCCcccccccccCCCCcHHHHHHhcCCcccc
Q 041061 3 STVNQKGQTILHVAVRRRRHDIFQFIVEKMPLYVPKWAARIDENGYTILHHVADMKHYEYG 63 (283)
Q Consensus 3 e~~D~~G~t~LH~Av~~g~~~iv~~Ll~~~~~~~~~~vn~~D~~GnTpLHlAa~~~~~~~~ 63 (283)
+..|.+|+||||+|+++|+.+++++|++++.+ ....+..+.+ +||||+|+..|+.+.+
T Consensus 122 ~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad--~~~~~i~~~~-~TpLh~Aa~~G~~eiv 179 (376)
T 2aja_A 122 KVIQAENYQAFRLAAENGHLHVLNRLCELAPT--EIMAMIQAEN-YHAFRLAAENGHLHVL 179 (376)
T ss_dssp C--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT--THHHHHSHHH-HHHHHHHHHTTCHHHH
T ss_pred HHhccCCCCHHHHHHHcCCHHHHHHHHhCCCC--ccccccCCCC-CCHHHHHHHCCCHHHH
Confidence 34556677777777777777777777765421 0001222222 6777777776665543
No 115
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=30.46 E-value=1.5e+02 Score=23.99 Aligned_cols=21 Identities=10% Similarity=0.108 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHhhhhccCCCC
Q 041061 129 SILSILIATFVFAAAYTVPGG 149 (283)
Q Consensus 129 ~vva~LIATvtFaA~~t~PGG 149 (283)
.+.++|++-.++.+.+.+|.+
T Consensus 24 alfaAliavla~i~~Ipip~~ 44 (198)
T 4dve_A 24 AFMTAFIIILGFLPGIPIGFI 44 (198)
T ss_dssp HHHHHHHHHHTTSCCBCCSSS
T ss_pred HHHHHHHHHHHHhccCCCCCC
Confidence 446667776777666777754
Done!