Your job contains 1 sequence.
>041063
NQLTLKPTLYIGRNRIQCLDFCKKRERGGKKKRHKREKSQLSKMEEPTEGASLVSGPDGK
KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF
HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN
RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE
AFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII
QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI
RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNT
LLEQLSGLIHAPSVPFQTTPATTQVPEEPEEDMERRPKPRIWNGEDYESDHDEDDKPPHM
ANFDDHMMRQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041063
(490 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ... 1933 1.1e-199 1
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ... 1620 1.6e-166 1
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s... 1482 6.7e-152 1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s... 1477 2.3e-151 1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe... 1477 2.3e-151 1
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe... 1477 2.3e-151 1
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s... 1477 2.3e-151 1
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s... 1474 4.7e-151 1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s... 1473 6.0e-151 1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe... 1471 9.8e-151 1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s... 1471 9.8e-151 1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp... 1469 1.6e-150 1
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"... 1465 4.2e-150 1
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe... 1465 4.2e-150 1
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe... 1465 4.2e-150 1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla... 1462 8.8e-150 1
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph... 1453 7.9e-149 1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe... 1444 7.1e-148 1
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s... 1444 7.1e-148 1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla... 1443 9.0e-148 1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s... 1427 4.5e-146 1
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd... 1394 1.4e-142 1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s... 1394 1.4e-142 1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac... 1390 3.7e-142 1
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe... 1375 1.5e-140 1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe... 1375 1.5e-140 1
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie... 1361 4.4e-139 1
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric... 1356 1.5e-138 1
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe... 1343 3.6e-137 1
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic... 1335 2.5e-136 1
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist... 1335 2.5e-136 1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl... 1331 6.7e-136 1
TAIR|locus:2157111 - symbol:HDA7 "histone deacetylase7" s... 1331 6.7e-136 1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd... 1305 3.8e-133 1
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica... 1294 5.6e-132 1
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec... 1294 5.6e-132 1
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s... 1291 1.2e-131 1
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe... 1287 3.1e-131 1
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s... 1287 3.1e-131 1
UNIPROTKB|F2Z4Z6 - symbol:HDAC3 "Histone deacetylase" spe... 1287 3.1e-131 1
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp... 1287 3.1e-131 1
RGD|619977 - symbol:Hdac3 "histone deacetylase 3" species... 1287 3.1e-131 1
UNIPROTKB|Q6P6W3 - symbol:Hdac3 "Histone deacetylase 3" s... 1287 3.1e-131 1
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe... 1286 3.9e-131 1
TAIR|locus:2098115 - symbol:HDA9 "histone deacetylase 9" ... 1275 5.7e-130 1
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl... 1275 5.7e-130 1
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac... 1246 6.8e-127 1
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe... 1236 7.8e-126 1
UNIPROTKB|F1M4V8 - symbol:F1M4V8 "Histone deacetylase" sp... 1198 8.3e-122 1
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla... 1188 9.5e-121 1
UNIPROTKB|D4AEB0 - symbol:Hdac3 "Histone deacetylase" spe... 1172 4.7e-119 1
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c... 1136 3.1e-115 1
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica... 1115 5.2e-113 1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec... 1115 5.2e-113 1
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub... 1010 6.9e-102 1
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd... 1004 3.0e-101 1
ASPGD|ASPL0000013866 - symbol:hosA species:162425 "Emeric... 990 9.1e-100 1
UNIPROTKB|E7ESJ6 - symbol:HDAC3 "Histone deacetylase 3" s... 702 5.0e-85 2
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety... 825 2.1e-81 1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s... 816 2.5e-81 1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe... 814 4.1e-81 1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp... 813 5.2e-81 1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie... 812 6.6e-81 1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe... 798 2.0e-79 1
UNIPROTKB|Q5TEE2 - symbol:HDAC1 "Histone deacetylase 1" s... 535 4.1e-79 2
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s... 789 1.8e-78 1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe... 788 2.3e-78 1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe... 746 6.5e-74 1
UNIPROTKB|F5GXM1 - symbol:HDAC1 "Histone deacetylase 1" s... 726 8.6e-72 1
UNIPROTKB|H3BM24 - symbol:HDAC2 "Histone deacetylase 2" s... 597 4.0e-58 1
UNIPROTKB|A6NGJ7 - symbol:HDAC8 "Histone deacetylase 8" s... 545 3.3e-57 2
RGD|1309799 - symbol:Hdac1 "histone deacetylase 1" specie... 574 1.1e-55 1
UNIPROTKB|A6NMT1 - symbol:HDAC8 "Histone deacetylase 8" s... 563 1.6e-54 1
UNIPROTKB|I3L5X0 - symbol:HDAC8 "Uncharacterized protein"... 562 2.1e-54 1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa... 561 2.6e-54 1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/... 561 2.6e-54 1
UNIPROTKB|E7ENE4 - symbol:HDAC8 "Histone deacetylase 8" s... 551 3.0e-53 1
CGD|CAL0001747 - symbol:HOS1 species:5476 "Candida albica... 458 1.2e-47 2
UNIPROTKB|Q59Q78 - symbol:HOS1 "Likely histone deacetylas... 458 1.2e-47 2
SGD|S000006272 - symbol:HOS1 "Class I histone deacetylase... 430 8.6e-45 2
TIGR_CMR|SPO_2177 - symbol:SPO_2177 "acetoin utilization ... 415 7.8e-39 1
UNIPROTKB|B4DQE7 - symbol:HDAC8 "cDNA FLJ58211, highly si... 407 5.5e-38 1
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote... 400 3.0e-37 1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr... 400 3.0e-37 1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote... 399 3.9e-37 1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ... 399 3.9e-37 1
UNIPROTKB|E7EVA8 - symbol:HDAC8 "Histone deacetylase 8" s... 382 2.4e-35 1
UNIPROTKB|E7EW22 - symbol:HDAC8 "Histone deacetylase 8" s... 375 1.3e-34 1
UNIPROTKB|E5RG37 - symbol:HDAC2 "Histone deacetylase 2" s... 342 4.2e-31 1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica... 347 1.4e-30 1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d... 347 1.4e-30 1
UNIPROTKB|F1RPM1 - symbol:LOC100625846 "Uncharacterized p... 335 2.3e-30 1
UNIPROTKB|E5RH52 - symbol:HDAC2 "Histone deacetylase 2" s... 333 3.8e-30 1
UNIPROTKB|F1N0W0 - symbol:HDAC3 "Uncharacterized protein"... 317 1.9e-28 1
UNIPROTKB|E5RFP9 - symbol:HDAC2 "Histone deacetylase 2" s... 308 2.1e-27 1
UNIPROTKB|C9J8F0 - symbol:HDAC8 "Histone deacetylase 8" s... 298 3.2e-26 1
SGD|S000004966 - symbol:HDA1 "Putative catalytic subunit ... 316 6.0e-26 1
UNIPROTKB|E5RHE7 - symbol:HDAC2 "Histone deacetylase 2" s... 292 1.6e-25 1
UNIPROTKB|Q4KBB7 - symbol:PFL_3361 "Histone deacetylase f... 288 4.6e-25 1
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370... 285 1.0e-24 1
WARNING: Descriptions of 132 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2162017 [details] [associations]
symbol:HDA6 "histone deacetylase 6" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016441
"posttranscriptional gene silencing" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
GO:GO:0016441 Uniprot:Q9FML2
Length = 471
Score = 1933 (685.5 bits), Expect = 1.1e-199, P = 1.1e-199
Identities = 358/437 (81%), Positives = 387/437 (88%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRR 103
ME G SL SGPDG+KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAH+LI+HY LHRR
Sbjct: 1 MEADESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRR 60
Query: 104 MEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFG 163
+E++RP A SDI RFH+ EYV+FLASVSPES GDPS +R+L+RFNVGEDCPVFDGLF
Sbjct: 61 LEISRPSLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFD 120
Query: 164 FCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR 223
FC+ASAGGSIGAAVKLNR DADIA+NW GGLHHAKKSEASGFCYVNDIVLGILELLK+ +
Sbjct: 121 FCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFK 180
Query: 224 RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPL 283
RVLY+DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHI+DVGA +GK+YALNVPL
Sbjct: 181 RVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPL 240
Query: 284 NDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL 343
NDG+DDESFR LFRP+IQKVMEVYQP+AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
Sbjct: 241 NDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL 300
Query: 344 RSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPC 403
RS+NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY+EYFGPDYTLHV+P
Sbjct: 301 RSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPS 360
Query: 404 NMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTPATTQVXXXXXXXXXXXXXXXIWN 463
MENLN KDME+IRNTLLEQLSGLIHAPSV FQ TP +V IW+
Sbjct: 361 PMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEDDMETRPKPRIWS 420
Query: 464 GE-DYESDHDEDDKPPH 479
G YESD D+DDKP H
Sbjct: 421 GTATYESDSDDDDKPLH 437
>TAIR|locus:2120948 [details] [associations]
symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
"regulation of multicellular organismal development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
acid and ethylene-dependent systemic resistance" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
Length = 501
Score = 1620 (575.3 bits), Expect = 1.6e-166, P = 1.6e-166
Identities = 295/430 (68%), Positives = 346/430 (80%)
Query: 48 TEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVN 107
T G SL SGPDG KR+V YFY+P +G+YYYGQGHPMKPHRIRM H L+ HYGL + M+V
Sbjct: 3 TGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVL 62
Query: 108 RPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQA 167
+PFPA D+ RFH D+YV FL S++PE+ D R LKRFNVGEDCPVFDGL+ FCQ
Sbjct: 63 KPFPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 168 SAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLY 227
AGGS+G +VKLN G DIA+NWAGGLHHAKK EASGFCYVNDIVL ILELLK H RVLY
Sbjct: 121 YAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY 180
Query: 228 VDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGL 287
VDID+HHGDGVEEAFY TDRVMTVSFHKFGD+FPGTGHI+D+G G GK+Y+LNVPL+DG+
Sbjct: 181 VDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGI 240
Query: 288 DDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFN 347
DDES+ LF+PI+ KVME+++P AVVLQCGADSLSGDRLGCFNLS+KGHA+C++F+RSFN
Sbjct: 241 DDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN 300
Query: 348 VPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMEN 407
VPL++LGGGGYTIRNVARCWCYET VA+GVE ++K+P +EYYEYFGPDYTLHV P NMEN
Sbjct: 301 VPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMEN 360
Query: 408 LNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTPATTQVXXXXXXXXXXXXXXXIWNGEDY 467
N+ + +E+IRN LL LS L HAPSVPFQ P T+ W+ D
Sbjct: 361 KNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKR---WD-PDS 416
Query: 468 ESDHDEDDKP 477
+ D D+D KP
Sbjct: 417 DMDVDDDRKP 426
>UNIPROTKB|P56517 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
activity" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
"negative regulation by host of viral transcription" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
NextBio:20813492 Uniprot:P56517
Length = 480
Score = 1482 (526.7 bits), Expect = 6.7e-152, P = 6.7e-152
Identities = 253/382 (66%), Positives = 321/382 (84%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G KR+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ SAGGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
+I KVME +QP AVVLQCG+DSLSGDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGY
Sbjct: 244 VISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 364 QRLFENLRMLPHAPGVQMQPIP 385
>UNIPROTKB|Q32PJ8 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
taurus" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043922 "negative regulation by host of viral transcription"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
"Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0001047 "core
promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
Length = 482
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 251/382 (65%), Positives = 321/382 (84%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G KR+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIP 385
>UNIPROTKB|F1RZK8 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:CU041333
Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
Length = 550
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 263/408 (64%), Positives = 328/408 (80%)
Query: 39 SQLSKMEEPTEGASLVSG-P-----DGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAH 92
S S+ P A+ V+G P G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM H
Sbjct: 43 SSSSRSPSPEAAAAAVAGEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTH 102
Query: 93 NLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVG 152
NL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +S+ ++RFNVG
Sbjct: 103 NLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVG 160
Query: 153 EDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIV 212
EDCPVFDGLF FCQ S GGS+ AVKLNR D+AVNWAGGLHHAKKSEASGFCYVNDIV
Sbjct: 161 EDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIV 220
Query: 213 LGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAG 272
L ILELLK H+RVLY+DID+HHGDGVEEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG
Sbjct: 221 LAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAG 280
Query: 273 QGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLS 332
+GK+YA+N P+ DG+DDES+ +F+PII KVME+YQP AVVLQCGADSLSGDRLGCFNL+
Sbjct: 281 KGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLT 340
Query: 333 VKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYF 392
VKGHA C+ +++FN+PL++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYF
Sbjct: 341 VKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYF 400
Query: 393 GPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
GPD+ LH+ P NM N N + MEKI+ L E L L HAP V Q P
Sbjct: 401 GPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 448
>MGI|MGI:108086 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
"chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
[GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
polymerase II repressing transcription factor binding"
evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
"NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
"neuron differentiation" evidence=IGI] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
regulation of oligodendrocyte differentiation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
Length = 482
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 251/382 (65%), Positives = 321/382 (84%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G KR+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIP 385
>RGD|619975 [details] [associations]
symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
Uniprot:Q4QQW4
Length = 482
Score = 1477 (525.0 bits), Expect = 2.3e-151, P = 2.3e-151
Identities = 251/382 (65%), Positives = 321/382 (84%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G KR+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIP 385
>UNIPROTKB|Q13547 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0043922 "negative regulation by host of viral
transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0007179 "transforming growth factor
beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0045786 "negative regulation of cell cycle" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=IPI] [GO:0009913
"epidermal cell differentiation" evidence=ISS] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=ISS]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0060789 "hair follicle placode formation"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0061198 "fungiform papilla formation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0010870 "positive regulation of receptor biosynthetic process"
evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
GermOnline:ENSG00000116478 Uniprot:Q13547
Length = 482
Score = 1474 (523.9 bits), Expect = 4.7e-151, P = 4.7e-151
Identities = 250/382 (65%), Positives = 321/382 (84%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G +R+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGY
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 303
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI+
Sbjct: 304 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 363
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 364 QRLFENLRMLPHAPGVQMQAIP 385
>UNIPROTKB|J3KPW7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
Length = 582
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 257/391 (65%), Positives = 320/391 (81%)
Query: 50 GASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRP 109
G + G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP
Sbjct: 92 GEPMAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRP 151
Query: 110 FPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASA 169
A ++ ++H+DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S
Sbjct: 152 HKATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLST 209
Query: 170 GGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVD 229
GGS+ AVKLNR D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+D
Sbjct: 210 GGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYID 269
Query: 230 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDD 289
ID+HHGDGVEEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N P+ DG+DD
Sbjct: 270 IDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDD 329
Query: 290 ESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVP 349
ES+ +F+PII KVME+YQP AVVLQCGADSLSGDRLGCFNL+VKGHA C+ +++FN+P
Sbjct: 330 ESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLP 389
Query: 350 LMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLN 409
L++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N
Sbjct: 390 LLMLGGGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQN 449
Query: 410 AHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
+ MEKI+ L E L L HAP V Q P
Sbjct: 450 TPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 480
>UNIPROTKB|F1NM39 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0009913
"epidermal cell differentiation" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060789 "hair follicle placode formation" evidence=IEA]
[GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
[GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
Uniprot:F1NM39
Length = 488
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 256/382 (67%), Positives = 318/382 (83%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVK
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVK 124
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LNR D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 125 LNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 184
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+P
Sbjct: 185 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP 244
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
II KVME+YQP AVVLQCGADSLSGDRLGCFNL+VKGHA C+ +++FN+PL++LGGGGY
Sbjct: 245 IISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGY 304
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+
Sbjct: 305 TIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIK 364
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 365 QRLFENLRMLPHAPGVQMQAIP 386
>UNIPROTKB|Q92769 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
of protein deacetylation" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
complex" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IC;IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
silencing" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
evidence=ISS] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISS] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
formation" evidence=ISS] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
evidence=IMP] [GO:0045347 "negative regulation of MHC class II
biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
of collagen biosynthetic process" evidence=IC] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=IMP] [GO:0045862 "positive regulation of
proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0004407 "histone deacetylase activity"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
Uniprot:Q92769
Length = 488
Score = 1471 (522.9 bits), Expect = 9.8e-151, P = 9.8e-151
Identities = 256/382 (67%), Positives = 318/382 (83%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVK
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVK 124
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LNR D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 125 LNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 184
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+P
Sbjct: 185 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP 244
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
II KVME+YQP AVVLQCGADSLSGDRLGCFNL+VKGHA C+ +++FN+PL++LGGGGY
Sbjct: 245 IISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGY 304
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+
Sbjct: 305 TIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIK 364
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 365 QRLFENLRMLPHAPGVQMQAIP 386
>MGI|MGI:1097691 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
differentiation" evidence=IGI] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO;IDA]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0016575 "histone
deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0021766 "hippocampus development"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
[GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IGI] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0051896 "regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055013 "cardiac muscle cell development"
evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
cell proliferation" evidence=IMP] [GO:0060297 "regulation of
sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
placode formation" evidence=IGI] [GO:0061029 "eyelid development in
camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
Length = 488
Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
Identities = 256/382 (67%), Positives = 317/382 (82%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVK
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVK 124
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LNR D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 125 LNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 184
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+P
Sbjct: 185 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP 244
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
II KVME+YQP AVVLQCGADSLSGDRLGCFNL+VKGHA C+ ++FN+PL++LGGGGY
Sbjct: 245 IISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGY 304
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+
Sbjct: 305 TIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIK 364
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 365 QRLFENLRMLPHAPGVQMQAIP 386
>UNIPROTKB|E2R692 [details] [associations]
symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
Ensembl:ENSCAFT00000016879 Uniprot:E2R692
Length = 487
Score = 1465 (520.8 bits), Expect = 4.2e-150, P = 4.2e-150
Identities = 250/383 (65%), Positives = 321/383 (83%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G +R+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVK-GHADCLRFLRSFNVPLMVLGGGG 357
++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++K GHA C+ F++SFN+P+++LGGGG
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGG 303
Query: 358 YTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
YTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI
Sbjct: 304 YTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKI 363
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
+ L E L L HAP V Q P
Sbjct: 364 KQRLFENLRMLPHAPGVQMQVIP 386
>UNIPROTKB|F6X8F5 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
Length = 483
Score = 1465 (520.8 bits), Expect = 4.2e-150, P = 4.2e-150
Identities = 250/383 (65%), Positives = 321/383 (83%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G +R+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVK-GHADCLRFLRSFNVPLMVLGGGG 357
++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++K GHA C+ F++SFN+P+++LGGGG
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGG 303
Query: 358 YTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
YTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI
Sbjct: 304 YTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKI 363
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
+ L E L L HAP V Q P
Sbjct: 364 KQRLFENLRMLPHAPGVQMQVIP 386
>UNIPROTKB|J9NUI0 [details] [associations]
symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
Length = 489
Score = 1465 (520.8 bits), Expect = 4.2e-150, P = 4.2e-150
Identities = 250/383 (65%), Positives = 321/383 (83%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G +R+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 123
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 124 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 183
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 184 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVK-GHADCLRFLRSFNVPLMVLGGGG 357
++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++K GHA C+ F++SFN+P+++LGGGG
Sbjct: 244 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGG 303
Query: 358 YTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
YTIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI
Sbjct: 304 YTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKI 363
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
+ L E L L HAP V Q P
Sbjct: 364 KQRLFENLRMLPHAPGVQMQVIP 386
>ZFIN|ZDB-GENE-020419-32 [details] [associations]
symbol:hdac1 "histone deacetylase 1" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] [GO:0060028 "convergent extension involved in axis
elongation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0021754 "facial nucleus development"
evidence=IMP] [GO:0031017 "exocrine pancreas development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
Length = 480
Score = 1462 (519.7 bits), Expect = 8.8e-150, P = 8.8e-150
Identities = 249/382 (65%), Positives = 318/382 (83%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G K++V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 7 GTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 66
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVK
Sbjct: 67 KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVK 124
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIA+NWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 125 LNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 184
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 185 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 244
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
I+ KVME+YQP AVVLQCGADSLSGDRLGCFNL++KGHA C+ +++SFN+PL++LGGGGY
Sbjct: 245 IMSKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGY 304
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TI+NVARCW +ETAVA+ N+LPYN+Y+EYFGPD+ LH+ P NM N N + +EKI+
Sbjct: 305 TIKNVARCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHISPFNMTNQNTNDYLEKIK 364
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 365 QRLFENLRMLPHAPGVQMQAIP 386
>FB|FBgn0015805 [details] [associations]
symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
"histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
[GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP;NAS]
[GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
"determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006099
"tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
electron transport chain" evidence=IDA] [GO:2001229 "negative
regulation of response to gamma radiation" evidence=IMP]
[GO:0005705 "polytene chromosome interband" evidence=IDA]
[GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
"Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
GermOnline:CG7471 Uniprot:Q94517
Length = 521
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 249/380 (65%), Positives = 317/380 (83%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K+RV Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++ +F
Sbjct: 6 KKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 65
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+DEYV FL S+ P++ + +++ ++RFNVGEDCPVFDGL+ FCQ SAGGS+ AAVKLN
Sbjct: 66 HSDEYVRFLRSIRPDNMSE--YNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLN 123
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
+ ++I +NW GGLHHAKKSEASGFCYVNDIVLGILELLK H+RVLY+DIDVHHGDGVEE
Sbjct: 124 KQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEE 183
Query: 241 AFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
AFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N+PL DG+DD+++ +F PII
Sbjct: 184 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
KVME +QP AVVLQCGADSL+GDRLGCFNL+VKGH C+ F++ +N+P +++GGGGYTI
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNT 420
RNV+RCW YET+VA+ VE N+LPYN+Y+EYFGPD+ LH+ P NM N N + +EKI+N
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNR 363
Query: 421 LLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 364 LFENLRMLPHAPGVQIQAIP 383
>UNIPROTKB|F1PR63 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
Length = 488
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 253/380 (66%), Positives = 313/380 (82%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K++ F IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++
Sbjct: 9 KQKKCVFSSGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVKLN
Sbjct: 69 HSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLN 126
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
R D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGVEE
Sbjct: 127 RQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEE 186
Query: 241 AFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
AFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+PII
Sbjct: 187 AFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPII 246
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
KVME+YQP AVVLQCGADSLSGDRLGCFNL+VKGHA C+ +++FN+PL++LGGGGYTI
Sbjct: 247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTI 306
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNT 420
RNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+
Sbjct: 307 RNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQR 366
Query: 421 LLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 367 LFENLRMLPHAPGVQMQAIP 386
>UNIPROTKB|P56518 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:7668
"Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
Length = 576
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 245/382 (64%), Positives = 319/382 (83%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G K+RV Y+Y+ +G+YYYGQGHPMKPHRIRM HNLI++YGL+R+ME+ RP A ++
Sbjct: 5 GTKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMT 64
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+D+YV+FL ++ P++ + +++ ++RFNVGEDCPVFDGL+ FCQ S+GGS+ AVK
Sbjct: 65 KYHSDDYVKFLRTIRPDNMSE--YTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVK 122
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LN+ DIA+NWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 123 LNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 182
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P
Sbjct: 183 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKP 242
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
I+ KVME+YQP A+ LQCGADSLSGDRLGCFNL++KGHA C+ F++ +N+PL+++GGGGY
Sbjct: 243 IMCKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGY 302
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YET+ A+GVE N+LPYN+Y+EYFGPD+ LH+ P NM N N + ++KI+
Sbjct: 303 TIRNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIK 362
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E + + HAP V Q P
Sbjct: 363 TRLYENMRMIPHAPGVQMQPIP 384
>UNIPROTKB|I3LG31 [details] [associations]
symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
Length = 489
Score = 1443 (513.0 bits), Expect = 9.0e-148, P = 9.0e-148
Identities = 249/381 (65%), Positives = 318/381 (83%)
Query: 63 RVSYFYEP-TIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
++ FY +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H
Sbjct: 14 KLPLFYSSGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYH 73
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIG--AAVKL 179
+D+Y++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ SAGGS+G +AVKL
Sbjct: 74 SDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVGPASAVKL 131
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVE 239
N+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGVE
Sbjct: 132 NKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVE 191
Query: 240 EAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
EAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P+
Sbjct: 192 EAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPV 251
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 359
+ KVME++QP AVVLQCG+DSLSGDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGYT
Sbjct: 252 MSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYT 311
Query: 360 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRN 419
IRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI+
Sbjct: 312 IRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQ 371
Query: 420 TLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 372 RLFENLRMLPHAPGVQMQAIP 392
>UNIPROTKB|P56519 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=TAS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
Length = 488
Score = 1427 (507.4 bits), Expect = 4.5e-146, P = 4.5e-146
Identities = 252/382 (65%), Positives = 312/382 (81%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVK
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVK 124
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LNR D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 125 LNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 184
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVS + FPGTG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+P
Sbjct: 185 EEAFYTTDRVMTVSEVSMVNNFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP 244
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
II KVME+YQP AVVLQCGADSLSGDRLGCFNL+VKGHA C+ +++FN+PL++LGGGGY
Sbjct: 245 IISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGY 304
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+
Sbjct: 305 TIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIK 364
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 365 QRLFENLRMLPHAPGVQMQAIP 386
>WB|WBGene00001834 [details] [associations]
symbol:hda-1 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
"histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IGI] [GO:0046580 "negative regulation of
Ras protein signal transduction" evidence=IGI] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IPI] [GO:0045138
"tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
MINT:MINT-226391 STRING:O17695 PaxDb:O17695
EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
NextBio:907546 Uniprot:O17695
Length = 461
Score = 1394 (495.8 bits), Expect = 1.4e-142, P = 1.4e-142
Identities = 248/388 (63%), Positives = 312/388 (80%)
Query: 55 SGP--DGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPA 112
+GP + KRRV+Y+Y+ IG+YYYGQGH MKPHRIRM H+L+++YGL+R +E+ RPFPA
Sbjct: 4 NGPLMEHGKRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPA 63
Query: 113 GPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGS 172
D+ RFH+DEY+ FL S +P++ SF++ + +FNVGEDCP+FDGL+ FCQ S+GGS
Sbjct: 64 SFEDMTRFHSDEYMTFLKSANPDNL--KSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGS 121
Query: 173 IGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDV 232
+ AA KLN+ DIA+NW GGLHHAKKSEASGFCY NDIVLGILELLK H+RVLYVDIDV
Sbjct: 122 LAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDV 181
Query: 233 HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESF 292
HHGDGVEEAFYTTDRVMTVSFHK+GDFFPGTG +KD+GAG+GK Y++NVPL DG+ D S+
Sbjct: 182 HHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSY 241
Query: 293 RGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMV 352
+ +F+PI+ KVME + P AVVLQCGADSL+GDRLG FNL++KGH +C RF RS+NVPLM+
Sbjct: 242 QSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMM 301
Query: 353 LGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHK 412
+GGGGYT RNVARCW YET++AV E N+LPYN+Y+EYFGP+Y LH+E N N N+
Sbjct: 302 VGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSD 361
Query: 413 DMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
+ K++ ++ L L PSV + P
Sbjct: 362 MLAKLQTDVIANLEQLTFVPSVQMRPIP 389
>UNIPROTKB|O17695 [details] [associations]
symbol:hda-1 "Histone deacetylase 1" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
Length = 461
Score = 1394 (495.8 bits), Expect = 1.4e-142, P = 1.4e-142
Identities = 248/388 (63%), Positives = 312/388 (80%)
Query: 55 SGP--DGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPA 112
+GP + KRRV+Y+Y+ IG+YYYGQGH MKPHRIRM H+L+++YGL+R +E+ RPFPA
Sbjct: 4 NGPLMEHGKRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPA 63
Query: 113 GPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGS 172
D+ RFH+DEY+ FL S +P++ SF++ + +FNVGEDCP+FDGL+ FCQ S+GGS
Sbjct: 64 SFEDMTRFHSDEYMTFLKSANPDNL--KSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGS 121
Query: 173 IGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDV 232
+ AA KLN+ DIA+NW GGLHHAKKSEASGFCY NDIVLGILELLK H+RVLYVDIDV
Sbjct: 122 LAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDV 181
Query: 233 HHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESF 292
HHGDGVEEAFYTTDRVMTVSFHK+GDFFPGTG +KD+GAG+GK Y++NVPL DG+ D S+
Sbjct: 182 HHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSY 241
Query: 293 RGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMV 352
+ +F+PI+ KVME + P AVVLQCGADSL+GDRLG FNL++KGH +C RF RS+NVPLM+
Sbjct: 242 QSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMM 301
Query: 353 LGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHK 412
+GGGGYT RNVARCW YET++AV E N+LPYN+Y+EYFGP+Y LH+E N N N+
Sbjct: 302 VGGGGYTPRNVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSD 361
Query: 413 DMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
+ K++ ++ L L PSV + P
Sbjct: 362 MLAKLQTDVIANLEQLTFVPSVQMRPIP 389
>DICTYBASE|DDB_G0268024 [details] [associations]
symbol:hdaA "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
Length = 495
Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
Identities = 238/379 (62%), Positives = 310/379 (81%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
R+VSYFY+ +G++YYG HPMKPHR+RM H+L+++YG++++M++ RP A ++ FH
Sbjct: 4 RKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTNFH 63
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+D+Y+ FL V+P++ D +S+ L +FNV EDCPVFDG++ FCQ S+GGSIG AVK+N
Sbjct: 64 SDDYINFLKLVTPDNMHD--YSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNS 121
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
++D+A+NWAGGLHHAKKSEASGFCY NDIVL ILELLK H RVLY+DID+HHGDGVEEA
Sbjct: 122 KESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEA 181
Query: 242 FYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQ 301
FYTTDRVMTVSFHK+GD+FPGTG +KD+GA +GK+Y+LN PL DG+DDES++ +FRPII+
Sbjct: 182 FYTTDRVMTVSFHKYGDYFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIR 241
Query: 302 KVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIR 361
VM+ Y+P AVV+QCGADSL+GDRLGCFNL+++GHA C+ FL+SFNVPL+VLGGGGYTI+
Sbjct: 242 SVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIK 301
Query: 362 NVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTL 421
NVARCW YET++ V E ++LPYN+Y EY+GP+Y LH+ P NMEN N +EK++ L
Sbjct: 302 NVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQL 361
Query: 422 LEQLSGLIHAPSVPFQTTP 440
LE L L HAP+ P
Sbjct: 362 LENLRNLNHAPAAAHHDIP 380
>UNIPROTKB|J9P9H5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
KEGG:cfa:475035 Uniprot:J9P9H5
Length = 458
Score = 1375 (489.1 bits), Expect = 1.5e-140, P = 1.5e-140
Identities = 241/358 (67%), Positives = 298/358 (83%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSF 142
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--Y 58
Query: 143 SRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEA 202
S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVKLNR D+AVNWAGGLHHAKKSEA
Sbjct: 59 SKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEA 118
Query: 203 SGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPG 262
SGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGVEEAFYTTDRVMTVSFHK+G++FPG
Sbjct: 119 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPG 178
Query: 263 TGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLS 322
TG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+PII KVME+YQP AVVLQCGADSLS
Sbjct: 179 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 238
Query: 323 GDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNK 382
GDRLGCFNL+VKGHA C+ +++FN+PL++LGGGGYTIRNVARCW YETAVA+ E N+
Sbjct: 239 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 298
Query: 383 LPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+ L E L L HAP V Q P
Sbjct: 299 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 356
>UNIPROTKB|B3KRS5 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
Length = 458
Score = 1375 (489.1 bits), Expect = 1.5e-140, P = 1.5e-140
Identities = 241/358 (67%), Positives = 298/358 (83%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSF 142
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--Y 58
Query: 143 SRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEA 202
S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVKLNR D+AVNWAGGLHHAKKSEA
Sbjct: 59 SKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEA 118
Query: 203 SGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPG 262
SGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGVEEAFYTTDRVMTVSFHK+G++FPG
Sbjct: 119 SGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPG 178
Query: 263 TGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLS 322
TG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+PII KVME+YQP AVVLQCGADSLS
Sbjct: 179 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 238
Query: 323 GDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNK 382
GDRLGCFNL+VKGHA C+ +++FN+PL++LGGGGYTIRNVARCW YETAVA+ E N+
Sbjct: 239 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 298
Query: 383 LPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+ L E L L HAP V Q P
Sbjct: 299 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIP 356
>SGD|S000005274 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
cerevisiae" [GO:0004407 "histone deacetylase activity"
evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
transcription from RNA polymerase II promoter in response to heat
stress" evidence=IMP] [GO:0003713 "transcription coactivator
activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IMP]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
transcription during meiosis" evidence=IMP] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
"Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0016239 "positive regulation of
macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IMP] [GO:0000115 "regulation of
transcription involved in S phase of mitotic cell cycle"
evidence=IMP] [GO:0045128 "negative regulation of reciprocal
meiotic recombination" evidence=IMP] [GO:0016479 "negative
regulation of transcription from RNA polymerase I promoter"
evidence=IMP] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
transcription involved in G2/M-phase of mitotic cell cycle"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IMP] [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0061188 "negative regulation of chromatin silencing at rDNA"
evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
[GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
Length = 433
Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
Identities = 237/380 (62%), Positives = 303/380 (79%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
KRRV+YFY+ +G+Y YG GHPMKPHRIRMAH+LI++YGL+++ME+ R PA ++ +F
Sbjct: 18 KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
HTDEY++FL+ V+P++ F R +FNVG+DCPVFDGL+ +C S GGS+ A +LN
Sbjct: 78 HTDEYIDFLSRVTPDNL--EMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLN 135
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
RG D+AVN+AGGLHHAKKSEASGFCY+NDIVLGI+ELL+ H RVLY+DIDVHHGDGVEE
Sbjct: 136 RGKCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEE 195
Query: 241 AFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
AFYTTDRVMT SFHK+G+FFPGTG ++D+G G GK YA+NVPL DG+DD ++R +F P+I
Sbjct: 196 AFYTTDRVMTCSFHKYGEFFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVI 255
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+K+ME YQP AVVLQCG DSLSGDRLGCFNLS++GHA+C+ +++SF +P+MV+GGGGYT+
Sbjct: 256 KKIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTM 315
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNT 420
RNVAR WC+ET + V D LPYNEYYEY+GPDY L V P NM N+N + ++K+
Sbjct: 316 RNVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTN 375
Query: 421 LLEQLSGLIHAPSVPFQTTP 440
+ L +APSV TP
Sbjct: 376 IFANLENTKYAPSVQLNHTP 395
>ASPGD|ASPL0000073195 [details] [associations]
symbol:rpdA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
"histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
deacetylation" evidence=IMP] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
"regulation of transcription involved in S phase of mitotic cell
cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
of chromatin silencing at telomere" evidence=IEA] [GO:0034503
"protein localization to nucleolar rDNA repeats" evidence=IEA]
[GO:0061408 "positive regulation of transcription from RNA
polymerase II promoter in response to heat stress" evidence=IEA]
[GO:0061186 "negative regulation of chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
organization" evidence=IEA] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] [GO:0061188 "negative
regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0051038 "negative regulation of transcription during meiosis"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
OMA:APDYELD Uniprot:G5EB64
Length = 687
Score = 1356 (482.4 bits), Expect = 1.5e-138, P = 1.5e-138
Identities = 236/387 (60%), Positives = 309/387 (79%)
Query: 54 VSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAG 113
VSG + +RV+YFY+ +G+Y Y GHPMKPHRIRM H+L+++Y L+++ME+ R PA
Sbjct: 20 VSGD--RSKRVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPAS 77
Query: 114 PSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSI 173
++ +FHTDEY++FL+ V+P++ +F++ ++NVG+DCPVFDGLF FC SAGGS+
Sbjct: 78 KFEMTQFHTDEYIDFLSKVTPDNMD--AFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSM 135
Query: 174 GAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVH 233
A +LNR DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELL+ +RVLYVDIDVH
Sbjct: 136 EGAARLNRNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVH 195
Query: 234 HGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFR 293
HGDGVEEAFYTTDRVMTVSFHK+G++FPGTG ++D+G GQGK+YA+N PL DG+DD S++
Sbjct: 196 HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYK 255
Query: 294 GLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVL 353
+F P+I+ VME Y+P+AVVLQCG DSLSGDRLGCFNLS++GHA+C+++++SFN+P +++
Sbjct: 256 SIFEPVIKSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLIV 315
Query: 354 GGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKD 413
GGGGYT+RNVAR W +ET + VG ++LPYN+YYEYF PDY L V P NM+N N +
Sbjct: 316 GGGGYTMRNVARTWAFETGILVGDNLGSELPYNDYYEYFAPDYELDVRPSNMDNANTREY 375
Query: 414 MEKIRNTLLEQLSGLIHAPSVPFQTTP 440
++KIR ++E L APSV P
Sbjct: 376 LDKIRTQVVENLKRTAFAPSVQMTDVP 402
>UNIPROTKB|F1MFZ7 [details] [associations]
symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0090311 "regulation of protein deacetylation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0042475
"odontogenesis of dentin-containing tooth" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
Length = 488
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 235/382 (61%), Positives = 301/382 (78%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 7 GGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMT 66
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 178
++H+DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVK
Sbjct: 67 KYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVK 124
Query: 179 LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGV 238
LNR D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HHGDGV
Sbjct: 125 LNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 184
Query: 239 EEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N P+ DG+DDES+ +F+P
Sbjct: 185 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKP 244
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
+I K+ E+ P V L+ +GD+ F VKGHA C+ +++FN+PL++LGGGGY
Sbjct: 245 VITKIGEITFPTKVCLEIQPVHSAGDQFWVFVYCVKGHAKCVEVVKTFNLPLLMLGGGGY 304
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIR 418
TIRNVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+
Sbjct: 305 TIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIK 364
Query: 419 NTLLEQLSGLIHAPSVPFQTTP 440
L E L L HAP V Q P
Sbjct: 365 QRLFENLRMLPHAPGVQMQAIP 386
>CGD|CAL0005608 [details] [associations]
symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000115 "regulation of transcription involved in
S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
transcription involved in G1/S phase of mitotic cell cycle"
evidence=IEA] [GO:0031939 "negative regulation of chromatin
silencing at telomere" evidence=IEA] [GO:0034503 "protein
localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
"positive regulation of transcription from RNA polymerase II
promoter in response to heat stress" evidence=IEA] [GO:0061186
"negative regulation of chromatin silencing at silent mating-type
cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
regulation of reciprocal meiotic recombination" evidence=IEA]
[GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
"negative regulation of chromatin silencing at rDNA" evidence=IEA]
[GO:0000117 "regulation of transcription involved in G2/M-phase of
mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
of transcription from RNA polymerase I promoter" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
"negative regulation of transcription during meiosis" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 229/381 (60%), Positives = 306/381 (80%)
Query: 60 KKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRR 119
+K+R++YFY+ IG+Y YG GHPMKPHRIRMAH+LI++YGL+++ME+ R PA ++ +
Sbjct: 16 QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75
Query: 120 FHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKL 179
FHTDEY++F++ V+P++ F++ +FNVG+DCPVFDGLF +C S GGS+ A +L
Sbjct: 76 FHTDEYIDFISRVNPDNLD--LFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARL 133
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVE 239
NRG DIA+N+AGGLHHAKKSEASGFCY+NDIVLGI+ELL+ H RVLY+DIDVHHGDGVE
Sbjct: 134 NRGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVE 193
Query: 240 EAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
EAFYTTDRVMT SFHK+G+FFPGTG ++D+G G+GK++++NVPL DG+DD +++ +F P+
Sbjct: 194 EAFYTTDRVMTCSFHKYGEFFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPV 253
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 359
I K++E YQP A+VLQCG DSLSGDRLGCFNLS+ GHA+C+ +++SFN+P+MV+GGGGYT
Sbjct: 254 ISKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYT 313
Query: 360 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRN 419
+RNVAR W YE+ + V+ ++LPYNEYYEY+GPDY L V NM N N+ + ++KI
Sbjct: 314 MRNVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILT 373
Query: 420 TLLEQLSGLIHAPSVPFQTTP 440
++ L HAPSV P
Sbjct: 374 NIIANLENTKHAPSVQMNEVP 394
>UNIPROTKB|Q5ADP0 [details] [associations]
symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
complex component Rpd3p" species:237561 "Candida albicans SC5314"
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
Length = 577
Score = 1335 (475.0 bits), Expect = 2.5e-136, P = 2.5e-136
Identities = 229/381 (60%), Positives = 306/381 (80%)
Query: 60 KKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRR 119
+K+R++YFY+ IG+Y YG GHPMKPHRIRMAH+LI++YGL+++ME+ R PA ++ +
Sbjct: 16 QKKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQ 75
Query: 120 FHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKL 179
FHTDEY++F++ V+P++ F++ +FNVG+DCPVFDGLF +C S GGS+ A +L
Sbjct: 76 FHTDEYIDFISRVNPDNLD--LFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARL 133
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVE 239
NRG DIA+N+AGGLHHAKKSEASGFCY+NDIVLGI+ELL+ H RVLY+DIDVHHGDGVE
Sbjct: 134 NRGKCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVE 193
Query: 240 EAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
EAFYTTDRVMT SFHK+G+FFPGTG ++D+G G+GK++++NVPL DG+DD +++ +F P+
Sbjct: 194 EAFYTTDRVMTCSFHKYGEFFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPV 253
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 359
I K++E YQP A+VLQCG DSLSGDRLGCFNLS+ GHA+C+ +++SFN+P+MV+GGGGYT
Sbjct: 254 ISKIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYT 313
Query: 360 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRN 419
+RNVAR W YE+ + V+ ++LPYNEYYEY+GPDY L V NM N N+ + ++KI
Sbjct: 314 MRNVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILT 373
Query: 420 TLLEQLSGLIHAPSVPFQTTP 440
++ L HAPSV P
Sbjct: 374 NIIANLENTKHAPSVQMNEVP 394
>POMBASE|SPBC36.05c [details] [associations]
symbol:clr6 "histone deacetylase (class I) Clr6"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=NAS]
[GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
DIP:DIP-29339N IntAct:O59702 STRING:O59702
EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
Length = 405
Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
Identities = 234/380 (61%), Positives = 297/380 (78%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K++VSYFY+ +G+Y+YG HPMKPHR+RM HNL+V+Y L+ ++ V P A +D+ R
Sbjct: 5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
HTDEY+EFL V+P++ F H +FNVG+DCPVFDGL+ FC SAGGSIGAA +LN
Sbjct: 65 HTDEYIEFLWRVTPDTM--EKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELN 122
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
G+A+IA+NWAGGLHHAKK EASGFCYVNDI L LELLK H+RVLY+DIDVHHGDGVEE
Sbjct: 123 SGNAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEE 182
Query: 241 AFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FYTTDRVMT SFHKFG++FPGTGHIKD G G GK YA+NVPL DG+DDES+ +F+P+I
Sbjct: 183 FFYTTDRVMTCSFHKFGEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVI 242
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+M+ ++P+AV+LQCG DSL+GDRLGCFNLS+KGH+ C+ F++SFN+P++ +GGGGYT+
Sbjct: 243 SHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTV 302
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNT 420
RNVAR W YET + G E D LPYN+Y +Y+GPDY L+V NMEN N + ++ I +
Sbjct: 303 RNVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSE 362
Query: 421 LLEQLSGLIHAPSVPFQTTP 440
++E L L APSV TP
Sbjct: 363 IIENLRNLSFAPSVQMHKTP 382
>TAIR|locus:2157111 [details] [associations]
symbol:HDA7 "histone deacetylase7" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
Genevestigator:Q9FH09 Uniprot:Q9FH09
Length = 409
Score = 1331 (473.6 bits), Expect = 6.7e-136, P = 6.7e-136
Identities = 251/396 (63%), Positives = 301/396 (76%)
Query: 53 LVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPA 112
+ S DG KRRVSYFYEP IGDYYYG P KP RIR+ HNLI+ Y LHR ME+N P A
Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLA 60
Query: 113 GPSDIRRFHTDEYVEFLASVSPESSGDP--SFSRHLKRFNVGEDC--PVFDGLFGFCQAS 168
SD +FH+ EY+ FL SV+PE+ DP S S +LKRFNV D PVF LF +C+A
Sbjct: 61 DASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAY 120
Query: 169 AGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYV 228
AGGSI AA KLNR +ADIA+NWAGG+HH KK +ASGF YVND+VL ILELLK +RVLY+
Sbjct: 121 AGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYI 180
Query: 229 DIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD 288
+I HGD VEEAF TDRVMTVSFHK GD TG I D G G+G++Y+LN PL DGLD
Sbjct: 181 EIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLD 236
Query: 289 DESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNV 348
D S RGLF P+I + ME+Y+P+ +VLQCGADSL+GD G FNLS+KGH DCL+++RSFNV
Sbjct: 237 DFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNV 296
Query: 349 PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENL 408
PLM+LGGGGYT+ NVARCWCYETA+AVG + DN LP N+Y +YF PDY LH+ P N +NL
Sbjct: 297 PLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNL 356
Query: 409 NAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTPATTQ 444
N D+ +R TLL QLS ++HAPSVPFQ TP+++Q
Sbjct: 357 NTRLDIITMRETLLAQLSLVMHAPSVPFQDTPSSSQ 392
>WB|WBGene00001836 [details] [associations]
symbol:hda-3 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
NextBio:878171 Uniprot:G5ECH0
Length = 465
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 232/379 (61%), Positives = 301/379 (79%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K RVSY+Y+ G++YYGQGHPMKPHR+RM H+LIV+YGL+R++ V RP A S+I R+
Sbjct: 7 KSRVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITRY 66
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+D+Y+ FL +V ++ +F+ + RF+VGEDCPVFDG++ FCQ S GGS+ AA +LN
Sbjct: 67 HSDDYINFLRNVKSDNMS--TFTDQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLN 124
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
R +++IA+NW GGLHHAKKSEASGFCY NDIVL ILELLK H+RVLY+DIDVHHGDGVEE
Sbjct: 125 RQESEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHKRVLYIDIDVHHGDGVEE 184
Query: 241 AFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
AFYTTDRVMTVSFHK G++FPGTG +KDVGAG GK+YALNVPL DG+DD ++ +FR I+
Sbjct: 185 AFYTTDRVMTVSFHKHGEYFPGTGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIM 244
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+VM +QP+AVVLQCGADSL+GDRLG FNL+ GH C+ +++SFNVPL+++GGGGYTI
Sbjct: 245 GEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTI 304
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEP-CNMENLNAHKDMEKIRN 419
RNV+RCW YETA+A+ E + LP ++Y++YF PDY LH++P + N N + +++
Sbjct: 305 RNVSRCWLYETAIALNQEVSDDLPLHDYFDYFIPDYKLHIKPLAALSNFNTPEFIDQTIV 364
Query: 420 TLLEQLSGLIHAPSVPFQT 438
LLE L L H PSV Q+
Sbjct: 365 ALLENLKQLPHVPSVQMQS 383
>CGD|CAL0005111 [details] [associations]
symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 232/383 (60%), Positives = 293/383 (76%)
Query: 58 DGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDI 117
D +KRRV+YFY+ +G+Y+YG GH MKPHRIRMAH+LI++Y L+++ME+ R PA ++
Sbjct: 13 DPRKRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLEL 72
Query: 118 RRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAV 177
+FHTDEY++F+ V+P++ F R FNVG+DCPVFDGL FC+ S GGS+ A
Sbjct: 73 TQFHTDEYIDFIDRVTPDNLH--LFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAA 130
Query: 178 KLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDG 237
+LNRG ADIA+N+AGGLHHAKKSEASGFCY NDIVLGI+ELL+ H RVLY+D DVHHGDG
Sbjct: 131 RLNRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDG 190
Query: 238 VEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFR 297
VEEAFYT DRVMT SFHKFG+FFPGTG++ D+G G+GK++A+N+PL DG+DD S++ +F
Sbjct: 191 VEEAFYTNDRVMTCSFHKFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFE 250
Query: 298 PIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGG 357
PII K+ME YQP A+VLQCG DSLSGDRLG FNLS++GHA+C+ F+RS VP+MVLGGGG
Sbjct: 251 PIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLGGGG 310
Query: 358 YTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
YTIRNVAR W +ET V G +LPYN YYEY+ P Y L V NM N N+ + ++KI
Sbjct: 311 YTIRNVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKI 370
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
++ L H PSV P
Sbjct: 371 LTQVISNLDNTKHTPSVQMNEVP 393
>UNIPROTKB|Q5A209 [details] [associations]
symbol:RPD3 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
Uniprot:Q5A209
Length = 480
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 232/383 (60%), Positives = 293/383 (76%)
Query: 58 DGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDI 117
D +KRRV+YFY+ +G+Y+YG GH MKPHRIRMAH+LI++Y L+++ME+ R PA ++
Sbjct: 13 DPRKRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLEL 72
Query: 118 RRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAV 177
+FHTDEY++F+ V+P++ F R FNVG+DCPVFDGL FC+ S GGS+ A
Sbjct: 73 TQFHTDEYIDFIDRVTPDNLH--LFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAA 130
Query: 178 KLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDG 237
+LNRG ADIA+N+AGGLHHAKKSEASGFCY NDIVLGI+ELL+ H RVLY+D DVHHGDG
Sbjct: 131 RLNRGQADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDG 190
Query: 238 VEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFR 297
VEEAFYT DRVMT SFHKFG+FFPGTG++ D+G G+GK++A+N+PL DG+DD S++ +F
Sbjct: 191 VEEAFYTNDRVMTCSFHKFGEFFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFE 250
Query: 298 PIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGG 357
PII K+ME YQP A+VLQCG DSLSGDRLG FNLS++GHA+C+ F+RS VP+MVLGGGG
Sbjct: 251 PIITKIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLGGGG 310
Query: 358 YTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
YTIRNVAR W +ET V G +LPYN YYEY+ P Y L V NM N N+ + ++KI
Sbjct: 311 YTIRNVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKI 370
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
++ L H PSV P
Sbjct: 371 LTQVISNLDNTKHTPSVQMNEVP 393
>UNIPROTKB|P56520 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0008134 "transcription
factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
Length = 428
Score = 1291 (459.5 bits), Expect = 1.2e-131, P = 1.2e-131
Identities = 223/382 (58%), Positives = 298/382 (78%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPNNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++YALNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 NQVVDYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV P+
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPS 382
>UNIPROTKB|E2R792 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
KEGG:cfa:478040 Uniprot:E2R792
Length = 428
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 223/382 (58%), Positives = 297/382 (77%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPTNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 NQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV PA
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPA 382
>UNIPROTKB|O15379 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0046329 "negative regulation of
JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
activity" evidence=IDA] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0045786 "negative regulation
of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
differentiation" evidence=IMP] Reactome:REACT_111217
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0008134
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
Length = 428
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 223/382 (58%), Positives = 297/382 (77%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPTNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 NQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV PA
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPA 382
>UNIPROTKB|F2Z4Z6 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
Uniprot:F2Z4Z6
Length = 428
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 223/382 (58%), Positives = 297/382 (77%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPTNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 NQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV PA
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPA 382
>MGI|MGI:1343091 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IGI]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
CleanEx:MM_HDAC3 Genevestigator:O88895
GermOnline:ENSMUSG00000024454 Uniprot:O88895
Length = 424
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 223/382 (58%), Positives = 297/382 (77%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPTNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 SQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV PA
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPA 382
>RGD|619977 [details] [associations]
symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=ISO] [GO:0033558 "protein
deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
multicellular organism growth" evidence=ISO] [GO:0042493 "response
to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
[GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 223/382 (58%), Positives = 297/382 (77%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPTNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 SQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV PA
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPA 382
>UNIPROTKB|Q6P6W3 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
Length = 428
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 223/382 (58%), Positives = 297/382 (77%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPTNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 SQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV PA
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPA 382
>UNIPROTKB|F1NH59 [details] [associations]
symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0040014
"regulation of multicellular organism growth" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
EMBL:AADN02036018 Ensembl:ENSGALT00000004150
Ensembl:ENSGALT00000034685 Uniprot:F1NH59
Length = 428
Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
Identities = 222/382 (58%), Positives = 297/382 (77%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+++Y++FL VSP + F++ L FNVG+DCPVF GLF FC G S+ A +LN
Sbjct: 63 SEDYIDFLQRVSPNNM--QGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 NQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV P+
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPS 382
>TAIR|locus:2098115 [details] [associations]
symbol:HDA9 "histone deacetylase 9" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0016575 "histone deacetylation" evidence=IEA;ISS]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
Length = 426
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 229/381 (60%), Positives = 290/381 (76%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K ++SYFY+ +G Y+G HPMKPHR+ M H+LI+ YGLH +MEV RP A P ++ +F
Sbjct: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQF 63
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+ +YVEFL ++PE+ F + R+N+GEDCPVF+ LF FCQ AGG+I AA +LN
Sbjct: 64 HSPDYVEFLQRINPENQN--LFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLN 121
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
DIA+NWAGGLHHAKK +ASGFCY+ND+VLGILELLK H RVLY+DIDVHHGDGVEE
Sbjct: 122 NKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEE 181
Query: 241 AFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
AFY TDRVMTVSFHKFGD FFPGTG +K++G +GKFYA+NVPL DG+DD SF LFR I
Sbjct: 182 AFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTI 241
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 359
I KV+E+YQP A+VLQCGADSL+ DRLGCFNLS+ GHA+C++F++ FN+PL+V GGGGYT
Sbjct: 242 ISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYT 301
Query: 360 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRN 419
NVARCW ET + + E N++P N+Y +YF PD++L + ++ENLN + I+
Sbjct: 302 KENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKV 361
Query: 420 TLLEQLSGLIHAPSVPFQTTP 440
+LE L + HAPSV Q P
Sbjct: 362 QILENLRYIQHAPSVQMQEVP 382
>ZFIN|ZDB-GENE-040426-847 [details] [associations]
symbol:hdac3 "histone deacetylase 3" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
ArrayExpress:Q803C3 Uniprot:Q803C3
Length = 428
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 221/381 (58%), Positives = 295/381 (77%)
Query: 63 RVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHT 122
R +YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH+
Sbjct: 4 RTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFHS 63
Query: 123 DEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRG 182
++Y++FL VSP + F++ L FNVG DCPVF GLF FC G S+ A +LN
Sbjct: 64 EDYIDFLQKVSPNNM--QGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHK 121
Query: 183 DADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAF 242
DIA+NWAGGLHHAKK EASGFCYVNDIV+ ILELLK H RVLY+DID+HHGDGV+EAF
Sbjct: 122 ICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAF 181
Query: 243 YTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQ 301
Y TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S+R LF+P+I+
Sbjct: 182 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIK 241
Query: 302 KVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIR 361
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ F++ F +PL+VLGGGGYT+R
Sbjct: 242 QVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVR 301
Query: 362 NVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRNT 420
NVARCW +ET++ V ++LPY+EY+EYF PD+TLH + +EN N+ + +E+IR T
Sbjct: 302 NVARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQT 361
Query: 421 LLEQLSGLIHAPSVPFQTTPA 441
+ E L L HAPSV + P+
Sbjct: 362 VFENLKMLNHAPSVQIRDVPS 382
>DICTYBASE|DDB_G0270338 [details] [associations]
symbol:hdaB "type-1 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
Length = 422
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 222/385 (57%), Positives = 294/385 (76%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K RV YF++ +G+Y+YG HPMKPHR+ + +NL+++YGLH++M + + PA D+ +F
Sbjct: 12 KTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLKF 71
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+++YV+FL V+PE+ + + +KRF++GEDCPVF GL+ +C +GGSI A+KLN
Sbjct: 72 HSEDYVDFLERVTPENINE---WKDVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLN 128
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
DIA+NW+GGLHHA+K EASGFCYVNDIVL ILELLK H RVLY+DIDVHHGDGV+E
Sbjct: 129 HRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQE 188
Query: 241 AFYTTDRVMTVSFHKFG-DFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
AFY TDRVMTVSFHKFG DFFPGTG I ++GA GK Y++NVPL DG+DD+++ +F+P+
Sbjct: 189 AFYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPV 248
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 359
IQ VM+ Y+P +VLQCGADSL DRLGCFNL++KGHA+C+RF++SFN+P +VLGGGGYT
Sbjct: 249 IQGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYT 308
Query: 360 IRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE----PCNMENLNAHKDME 415
+RNVARCW YET+V V E +N+LPYN+Y +++ PD+ L + P EN N +E
Sbjct: 309 VRNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQLIPDYTGLPFKYENANTKSYLE 368
Query: 416 KIRNTLLEQLSGLIHAPSVPFQTTP 440
+R +LE L L APSV Q P
Sbjct: 369 SLRIKILENLRILQWAPSVQIQDVP 393
>FB|FBgn0025825 [details] [associations]
symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
Length = 438
Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
Identities = 214/383 (55%), Positives = 292/383 (76%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
RRVSYFY +G+++YG GHPMKP R+ + H+L+++YGLH++M++ RP+ A D+ RFH
Sbjct: 4 RRVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFH 63
Query: 122 TDEYVEFLASVSPES--SGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKL 179
+DEY+ +L V+P++ +++++L F+VGEDCPVFDGLF FC G S+ A KL
Sbjct: 64 SDEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKL 123
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVE 239
N +DI +NW+GGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DIDVHHGDGV+
Sbjct: 124 NHNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQ 183
Query: 240 EAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EAFY TDRVMT SFHK+G+ FFPGTG + ++GA G++Y++NVPL +G+DD+S+ +F+P
Sbjct: 184 EAFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKP 243
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
II +M+ Y+P A+VLQCGADSL+GDRLGCF+LS KGH +C++F++ NVP +V+GGGGY
Sbjct: 244 IISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGY 303
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKI 417
T+RNVARCW +ET++ V + +N LP EYY++F PD+TLH E +N N+ + +E I
Sbjct: 304 TLRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELI 363
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
+ E L H+PSV TP
Sbjct: 364 VKHVYENLKMCQHSPSVQMVQTP 386
>UNIPROTKB|F1M4V8 [details] [associations]
symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
Length = 465
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 219/375 (58%), Positives = 281/375 (74%)
Query: 66 YFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEY 125
Y+Y+ G+Y YGQGHP+KPH+IRM HNL + YGL+R+ME+ RP A ++ ++H+D+Y
Sbjct: 1 YYYDGDAGNYNYGQGHPVKPHQIRMTHNLPLSYGLYRKMEIYRPHKANAEEMTKYHSDDY 60
Query: 126 VEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDAD 185
++FL + P+S + + + ++RFNVG+DCPVF+GL FCQ S GGS+ +AVKLN+ D
Sbjct: 61 IKFLRFIRPDSMSE--YIKQMQRFNVGQDCPVFNGLSEFCQLSTGGSVASAVKLNKQQTD 118
Query: 186 IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTT 245
IAVNWAG LHHAK SEASGFCYVNDIVL ILELLK +RVL +DID HHGDG EEAFYT
Sbjct: 119 IAVNWAGDLHHAKNSEASGFCYVNDIVLAILELLKYLQRVLCMDIDTHHGDGTEEAFYTA 178
Query: 246 DRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVME 305
D VMTVSFH F P TG ++D+GAG+GK+YA+N PL D +DDES +F+P++ KVME
Sbjct: 179 DWVMTVSFHNF----PVTGDLRDIGAGKGKYYAINYPLRDCIDDESCEAIFKPVMSKVME 234
Query: 306 VYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVAR 365
P AVVLQCG+DSLSGD LG FNL++KGH C+ F++SFN+P+++L GGGYTI NVAR
Sbjct: 235 ---PSAVVLQCGSDSLSGDWLGSFNLTIKGHK-CVGFVKSFNLPMLMLRGGGYTIHNVAR 290
Query: 366 CWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQL 425
CW YETAV + E N+LPYN+Y+EYFGPD+ LH+ P N N N ++ +E I+ L E L
Sbjct: 291 CWTYETAVTLDTEIPNELPYNDYFEYFGPDFKLHISPSNTTNQNTNEYLE-IKQRLFENL 349
Query: 426 SGLIHAPSVPFQTTP 440
L H P V Q P
Sbjct: 350 RMLPHVPEVQMQAIP 364
>UNIPROTKB|F1SV89 [details] [associations]
symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
Length = 392
Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
Identities = 208/293 (70%), Positives = 251/293 (85%)
Query: 150 NVGEDCPVFDGLFGFCQASAGGSIG--AAVKLNRGDADIAVNWAGGLHHAKKSEASGFCY 207
NVGEDCPVFDGLF FCQ SAGGS+G +AVKLN+ DIAVNWAGGLHHAKKSEASGFCY
Sbjct: 3 NVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCY 62
Query: 208 VNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIK 267
VNDIVL ILELLK H+RVLY+DID+HHGDGVEEAFYTTDRVMTVSFHK+G++FPGTG ++
Sbjct: 63 VNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLR 122
Query: 268 DVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLG 327
D+GAG+GK+YA+N PL DG+DDES+ +F+P++ KVME++QP AVVLQCG+DSLSGDRLG
Sbjct: 123 DIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLG 182
Query: 328 CFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNE 387
CFNL++KGHA C+ F++SFN+P+++LGGGGYTIRNVARCW YETAVA+ E N+LPYN+
Sbjct: 183 CFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYND 242
Query: 388 YYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
Y+EYFGPD+ LH+ P NM N N ++ +EKI+ L E L L HAP V Q P
Sbjct: 243 YFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 295
>UNIPROTKB|D4AEB0 [details] [associations]
symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
ArrayExpress:D4AEB0 Uniprot:D4AEB0
Length = 428
Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
Identities = 211/382 (55%), Positives = 278/382 (72%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V P + H
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVKTPSRNKQEKLCPVH 62
Query: 122 TDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
+ F P+S + S S G + PVF GLF FC G S+ A +LN
Sbjct: 63 GVPLIWFSTRFGPKSLLNGSVSG--SGVEEGREFPVFPGLFEFCSRYTGASLQGATQLNN 120
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EA
Sbjct: 121 KICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEA 180
Query: 242 FYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I
Sbjct: 181 FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVI 240
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+V++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLGGGGYT+
Sbjct: 241 SQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTV 300
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRN 419
RNVARCW YET++ V +LPY+EY+EYF PD+TLH + +EN N+ + +++IR
Sbjct: 301 RNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQ 360
Query: 420 TLLEQLSGLIHAPSVPFQTTPA 441
T+ E L L HAPSV PA
Sbjct: 361 TIFENLKMLNHAPSVQIHDVPA 382
>POMBASE|SPAC3G9.07c [details] [associations]
symbol:hos2 "histone deacetylase (class I) Hos2"
species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IC] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
"Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
GO:GO:0034739 Uniprot:O13298
Length = 434
Score = 1136 (405.0 bits), Expect = 3.1e-115, P = 3.1e-115
Identities = 206/384 (53%), Positives = 278/384 (72%)
Query: 60 KKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRR 119
+K+RV+Y + +G+Y+YG HPMKPHRI + ++L++ YGLH +M V P A ++
Sbjct: 24 QKKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSE 83
Query: 120 FHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKL 179
FH ++Y++FL V+P+++ F+ ++FN+G+DCPVFDG + F Q SAG S+ A+ KL
Sbjct: 84 FHREDYLDFLKRVTPDNA--EQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKL 141
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVE 239
+G DIA+NW+GGLHHAK+ EASGFCYVNDIVL IL +L+ RVLY+DID+HHGDGV+
Sbjct: 142 VQGQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQ 201
Query: 240 EAFYTTDRVMTVSFHKF-GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
+AFY +DRV+TVSFHK+ GDFFP TG+ + G GK++ALNVPL DG+ DE + LF+
Sbjct: 202 QAFYESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKS 261
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
II+ + +QP A+VLQCGADSL DRLG FNLS+ H +C+RF RSFN+P++V+GGGGY
Sbjct: 262 IIEPTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGY 321
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNE-YYEYFGPDYTLHVE-PCNMENLNAHKDMEK 416
T+RNVAR WCYET++ V + ++LP YYE+F PDYTLH +EN N K +E
Sbjct: 322 TLRNVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTLHPRLTTKIENKNTPKALED 381
Query: 417 IRNTLLEQLSGLIHAPSVPFQTTP 440
+R LEQL L APSV Q P
Sbjct: 382 LRIRALEQLRYLGGAPSVQMQQIP 405
>CGD|CAL0004384 [details] [associations]
symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
"Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 197/383 (51%), Positives = 280/383 (73%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K VSY Y P + ++YG HPMKP R+ + +L++ Y L+ +M++ P A ++ F
Sbjct: 34 KYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELLEF 93
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+++Y++FL S++PE S + L +FN+G+DCP+FDG++ + AG S+ A KL
Sbjct: 94 HSEDYIDFLQSITPEKCKTIS-NDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKLI 152
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
G +DIA+NW+GGLHHAKK E SGFCYVNDIVL I+ LL+VH RV+Y+DID+HHGDGV+E
Sbjct: 153 SGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQE 212
Query: 241 AFYTTDRVMTVSFHKF-GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
AFY TDRVMTVSFHK+ G+FFPGTG + +VG G GK YA+NVPL DG+DDES+ LF+ I
Sbjct: 213 AFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSI 272
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 359
++ ++ +QP +V QCGADSL DRLGCFNL+++ H +C++F++SF +P++V+GGGGYT
Sbjct: 273 MEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 332
Query: 360 IRNVARCWCYETAVAVGVEPDNKLP-YNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKI 417
RNV+R WCYET+V V D+K+P Y Y++FGPDY+LH + ++N N+ K ++ +
Sbjct: 333 PRNVSRLWCYETSVLNDVNLDHKIPNYLPTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSV 392
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
+ T++EQ+ L HAPSV P
Sbjct: 393 QTTIMEQIRYLNHAPSVQMYEIP 415
>UNIPROTKB|Q5A839 [details] [associations]
symbol:HOS2 "Histone deacetylase" species:237561 "Candida
albicans SC5314" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
switching" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900429
"negative regulation of filamentous growth of a population of
unicellular organisms" evidence=IMP] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
KEGG:cal:CaO19.5377 Uniprot:Q5A839
Length = 454
Score = 1115 (397.6 bits), Expect = 5.2e-113, P = 5.2e-113
Identities = 197/383 (51%), Positives = 280/383 (73%)
Query: 61 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
K VSY Y P + ++YG HPMKP R+ + +L++ Y L+ +M++ P A ++ F
Sbjct: 34 KYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELLEF 93
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+++Y++FL S++PE S + L +FN+G+DCP+FDG++ + AG S+ A KL
Sbjct: 94 HSEDYIDFLQSITPEKCKTIS-NDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKLI 152
Query: 181 RGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEE 240
G +DIA+NW+GGLHHAKK E SGFCYVNDIVL I+ LL+VH RV+Y+DID+HHGDGV+E
Sbjct: 153 SGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQE 212
Query: 241 AFYTTDRVMTVSFHKF-GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
AFY TDRVMTVSFHK+ G+FFPGTG + +VG G GK YA+NVPL DG+DDES+ LF+ I
Sbjct: 213 AFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSI 272
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYT 359
++ ++ +QP +V QCGADSL DRLGCFNL+++ H +C++F++SF +P++V+GGGGYT
Sbjct: 273 MEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 332
Query: 360 IRNVARCWCYETAVAVGVEPDNKLP-YNEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKI 417
RNV+R WCYET+V V D+K+P Y Y++FGPDY+LH + ++N N+ K ++ +
Sbjct: 333 PRNVSRLWCYETSVLNDVNLDHKIPNYLPTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSV 392
Query: 418 RNTLLEQLSGLIHAPSVPFQTTP 440
+ T++EQ+ L HAPSV P
Sbjct: 393 QTTIMEQIRYLNHAPSVQMYEIP 415
>SGD|S000003162 [details] [associations]
symbol:HOS2 "Histone deacetylase and subunit of Set3 and
Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
evidence=IDA] [GO:0032874 "positive regulation of stress-activated
MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0006325 "chromatin organization"
evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
deacetylase activity" evidence=IDA] [GO:0045835 "negative
regulation of meiosis" evidence=IMP] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
GO:GO:0045129 Uniprot:P53096
Length = 452
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 187/386 (48%), Positives = 265/386 (68%)
Query: 63 RVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHT 122
RVSY + + Y+YG HPMKP R+ + +L+ YGLH+ M++ A ++ +FH+
Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86
Query: 123 DEYVEFLASVSPESSGD-PSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
++YV FL+ VSPE++ P + L+ FN+G+DCP+F L+ + G S+ A KL
Sbjct: 87 EDYVNFLSKVSPENANKLPRGT--LENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLIN 144
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEA 241
+DIA+NW+GGLHHAKK+ SGFCYVNDIVL IL LL+ H R+LY+DID+HHGDGV+EA
Sbjct: 145 NQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEA 204
Query: 242 FYTTDRVMTVSFHKF-GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FYTTDRV T+SFHK+ G+FFPGTG + ++G +GK +ALNVPL DG+DD+S+ LF+ I+
Sbjct: 205 FYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIV 264
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
++ ++P +V QCGADSL DRLGCFNL++K H +C++F++SF +P++V+GGGGYT
Sbjct: 265 DPLIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTP 324
Query: 361 RNVARCWCYETAVAVGVEPDNKLPYN-EYYEYFGPDYTLHVEPCNM-ENLNAHKDMEKIR 418
RNV+R W YET + V +P + + + FGPDY+L+ ++ EN N+ K +E IR
Sbjct: 325 RNVSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSLYPMLDDLYENKNSKKLLEDIR 384
Query: 419 NTLLEQLSGLIHAPSVPFQTTPATTQ 444
LE + L APSV TQ
Sbjct: 385 IRCLENIRYLQGAPSVRMDAECIPTQ 410
>WB|WBGene00001835 [details] [associations]
symbol:hda-2 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=ISS] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
Length = 507
Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
Identities = 196/384 (51%), Positives = 258/384 (67%)
Query: 56 GPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPS 115
G D KKR V+Y+Y +G ++YGQ HPMKP R+ + ++L+V Y + + M V +
Sbjct: 23 GADVKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAA 82
Query: 116 DIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGA 175
DI FHT++YV FL +V+P+ G L++FN+GEDCP+F GL+ +C AGGS+
Sbjct: 83 DISVFHTEDYVNFLQTVTPKL-GLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEG 141
Query: 176 AVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHG 235
A +LN DI +NW GGLHHAKKSEASGFCYVNDIVLGILELLK H+RVLY+DID+HHG
Sbjct: 142 ARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHG 201
Query: 236 DGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGL 295
DGV+EAF +DRVMTVSFH+FG +FPG+G I D G G GK++A+NVPL + DE + L
Sbjct: 202 DGVQEAFNNSDRVMTVSFHRFGQYFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKL 261
Query: 296 FRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGG 355
F +I V E + P+A+VLQCG+DSL DRLG F LS HA +++++S PLMVLGG
Sbjct: 262 FESVISGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLGG 321
Query: 356 GGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYE-YFGPDYTL-HVEPCNMENLNAHKD 413
GGYT+RNVARCW ET V +G+ D+++P Y YF P ++ P M + N+
Sbjct: 322 GGYTLRNVARCWALETGVILGLRMDDEIPGTSLYSHYFTPRLLRPNLVP-KMNDANSAAY 380
Query: 414 MEKIRNTLLEQLSGLIHAPSVPFQ 437
+ I L L + APSV Q
Sbjct: 381 LASIEKETLACLRMIRGAPSVQMQ 404
>ASPGD|ASPL0000013866 [details] [associations]
symbol:hosA species:162425 "Emericella nidulans"
[GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
"cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
[GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0045129 "NAD-independent histone deacetylase activity"
evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0045835 "negative
regulation of meiosis" evidence=IEA] [GO:0032874 "positive
regulation of stress-activated MAPK cascade" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
Uniprot:Q5B6M4
Length = 482
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 191/404 (47%), Positives = 269/404 (66%)
Query: 53 LVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPA 112
+++ P G RVS+ P + +++GQ HPMKP R+ + L++ YG+H M++ A
Sbjct: 30 IIARPSGY--RVSWHANPAVELHHFGQSHPMKPWRLTLTKQLVLAYGMHHAMDLYHCRAA 87
Query: 113 GPSDIRRFHTDEYVEFLASVSPESSGDPS----FSRHLKRFNVGEDCPVFDGLFGFCQAS 168
++ FHT +Y++FL +V P D FS ++ RFN G+DCP+FDGLF +C
Sbjct: 88 TVEELSDFHTSDYLDFLQTVVPGDMNDAQASKDFSENIVRFNFGDDCPIFDGLFQYCSLY 147
Query: 169 AGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYV 228
AG S+ AA KL ADIA+NW+GGLHHAKK+EASGFCYVNDIVL IL+LL++H RV+Y+
Sbjct: 148 AGASLDAARKLCNNQADIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRIHPRVMYI 207
Query: 229 DIDVHHGDGVEEAFYTTDRVMTVSFHKFG--DFFPGTGHIKDVGA----GQGKFYALNVP 282
DIDVHHGDGVE+AF++TDRV+TVSFHK+ +FFPGTG + G G +A+NVP
Sbjct: 208 DIDVHHGDGVEQAFWSTDRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVP 267
Query: 283 LNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF 342
L+DG+DDES+ LF+ ++ + ++P A+VLQCGADSL DRLGCFNL+V H C+ +
Sbjct: 268 LHDGIDDESYVQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAY 327
Query: 343 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPD-NK-LPYN-EYYEYFGPDYTLH 399
++F +P++V+GGGGYT RNV+R W +ET++ + + N +P N + +FGPD++L
Sbjct: 328 TKTFGLPMLVVGGGGYTPRNVSRAWAHETSILIDAQDKINPVIPSNVAFRNHFGPDFSLF 387
Query: 400 V---EPCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
E +EN N+ + I T+ EQL L APSV P
Sbjct: 388 PPLSEMRKLENKNSRAYLATIVQTITEQLRYLQAAPSVQMSVIP 431
>UNIPROTKB|E7ESJ6 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
Bgee:E7ESJ6 Uniprot:E7ESJ6
Length = 219
Score = 702 (252.2 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 121/171 (70%), Positives = 151/171 (88%)
Query: 185 DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYT 244
DIA+NWAGGLHHAKK EASGFCYVNDIV+GILELLK H RVLY+DID+HHGDGV+EAFY
Sbjct: 49 DIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYL 108
Query: 245 TDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKV 303
TDRVMTVSFHK+G+ FFPGTG + +VGA G++Y LNVPL DG+DD+S++ LF+P+I +V
Sbjct: 109 TDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQV 168
Query: 304 MEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG 354
++ YQP +VLQCGADSL DRLGCFNLS++GH +C+ +++SFN+PL+VLG
Sbjct: 169 VDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG 219
Score = 168 (64.2 bits), Expect = 5.0e-85, Sum P(2) = 5.0e-85
Identities = 23/43 (53%), Positives = 38/43 (88%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRM 104
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKM 45
>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
symbol:hdac8 "histone deacetylase 8" species:7955
"Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005976 "polysaccharide metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
"hydrolase activity, hydrolyzing O-glycosyl compounds"
evidence=IEA] [GO:0005977 "glycogen metabolic process"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
Bgee:E7F4R5 Uniprot:E7F4R5
Length = 1376
Score = 825 (295.5 bits), Expect = 2.1e-81, P = 2.1e-81
Identities = 154/357 (43%), Positives = 228/357 (63%)
Query: 76 YYGQGHPMKPHRIR--MAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVS 133
+ GQ +P + M H+LI YGL + M V +P A ++ FHTD Y++ L +S
Sbjct: 1023 FSGQSFDAEPVELAASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKIS 1082
Query: 134 PESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGG 193
+ D S F +G DCPV +G+F + A G ++ AA L G D+A+NWAGG
Sbjct: 1083 QDGDNDDPQSAD---FGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGG 1139
Query: 194 LHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
HHAKK EASGFCYVND VLGIL+L + + RVLYVD+D+HHGDGVE+AF T +VMTVS
Sbjct: 1140 WHHAKKDEASGFCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSL 1199
Query: 254 HKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAV 312
HKF FFPGTG + D G G+G++YA+NVP DG+ D+ + F ++Q+V ++ P+AV
Sbjct: 1200 HKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAV 1259
Query: 313 VLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETA 372
V+Q GAD+++GD + FN++ G A CL ++ + +P ++LGGGGY + N ARCW Y T
Sbjct: 1260 VMQLGADTMAGDPMCSFNMTSVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTG 1319
Query: 373 VAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGLI 429
+G +++P +E++ +GPDY+L + P + N + +E++ +T+ L ++
Sbjct: 1320 TVLGQTLSSEIPDHEFFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKGNLKNVV 1376
>UNIPROTKB|Q9BY41 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0071922 "regulation of cohesin localization to
chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
assembly or disassembly" evidence=TAS] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
GO:GO:0006333 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
Uniprot:Q9BY41
Length = 377
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 161/389 (41%), Positives = 237/389 (60%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNV 281
R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGTG + DVG G+G++Y++NV
Sbjct: 170 ERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNV 229
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLR 341
P+ DG+ DE + + ++++V + + P AVVLQ GAD+++GD + FN++ G CL+
Sbjct: 230 PIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLK 289
Query: 342 FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE 401
++ + + ++LGGGGY + N ARCW Y T V +G +++P +E++ +GPDY L +
Sbjct: 290 YILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEIT 349
Query: 402 P-CNMENLNAHKDMEKIRNTLLEQLSGLI 429
P C + H+ +++I N + L ++
Sbjct: 350 PSCRPDRNEPHR-IQQILNYIKGNLKHVV 377
>UNIPROTKB|J9P5B2 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
Length = 415
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 162/390 (41%), Positives = 235/390 (60%)
Query: 43 KMEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLH 101
KMEEP E A G+ Y Y P +Y K P R M H+LI Y LH
Sbjct: 38 KMEEPEEPAE-----SGQSLPPVYIYSP---EYVSMCDSLAKVPKRASMVHSLIEAYALH 89
Query: 102 RRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGL 161
++M + +P A ++ FHTD Y++ L VS E D S + +G DCP +G+
Sbjct: 90 KQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDS---VEYGLGYDCPATEGI 146
Query: 162 FGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKV 221
F + A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 147 FDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK 206
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALN 280
R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGTG + DVG G+G++Y++N
Sbjct: 207 FDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVN 266
Query: 281 VPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCL 340
VP+ DG+ DE + + ++++V + P AVVLQ GAD+++GD + FN++ G CL
Sbjct: 267 VPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCL 326
Query: 341 RFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHV 400
+++ + + ++LGGGGY + N ARCW Y T V +G +++P +E++ +GPDY L +
Sbjct: 327 KYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEI 386
Query: 401 EP-CNMENLNAHKDMEKIRNTLLEQLSGLI 429
P C + H+ +++I N + L ++
Sbjct: 387 TPSCRPDRNEPHR-VQQILNYIKGNLKHVV 415
>MGI|MGI:1917565 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
Genevestigator:Q8VH37 Uniprot:Q8VH37
Length = 377
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 161/389 (41%), Positives = 238/389 (61%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
ME P E A+ G Y Y P +Y +K P R M H+LI Y LH+
Sbjct: 1 MEMPEEPAN-----SGHSLPPVYIYSP---EYVSICDSLVKVPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDEDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A GG+I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNV 281
R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGTG + DVG G+G++Y++NV
Sbjct: 170 DRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNV 229
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLR 341
P+ DG+ DE + + ++++V + + P AVVLQ GAD+++GD + FN++ G CL+
Sbjct: 230 PIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLK 289
Query: 342 FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVE 401
++ + + ++LGGGGY + N ARCW Y T V +G +++P +E++ +GPDY L +
Sbjct: 290 YVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEIT 349
Query: 402 P-CNMENLNAHKDMEKIRNTLLEQLSGLI 429
P C + H+ +++I N + L ++
Sbjct: 350 PSCRPDRNEPHR-IQQILNYIKGNLKHVV 377
>RGD|1562895 [details] [associations]
symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
Length = 377
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 150/347 (43%), Positives = 224/347 (64%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSR 144
P R M H+LI Y LH++M + +P A ++ FHTD Y++ L VS E GD
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDEDHPD 92
Query: 145 HLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASG 204
++ + +G DCP +G+F + A GG+I AA L G +A+NW+GG HHAKK EASG
Sbjct: 93 SIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASG 151
Query: 205 FCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGT 263
FCY+ND VLGIL L + R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGT
Sbjct: 152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211
Query: 264 GHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSG 323
G + DVG G+G++Y++NVP+ DG+ DE + + ++++V + + P AVVLQ GAD+++G
Sbjct: 212 GDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAG 271
Query: 324 DRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKL 383
D + FN++ G CL+++ + + ++LGGGGY + N ARCW Y T V +G +++
Sbjct: 272 DPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331
Query: 384 PYNEYYEYFGPDYTLHVEP-CNMENLNAHKDMEKIRNTLLEQLSGLI 429
P +E++ +GPDY L + P C + H+ +++I N + L ++
Sbjct: 332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHR-IQQILNYIKGNLKHVV 377
>UNIPROTKB|G3MYR9 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
Length = 377
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 148/347 (42%), Positives = 222/347 (63%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSR 144
P R M H+LI Y LH++M + +P A ++ FHTD Y++ L VS + GD
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSED--GDDDHPD 92
Query: 145 HLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASG 204
++ + +G DCP +G+F + A G +I AA L G +A+NW+GG HHAKK EASG
Sbjct: 93 SIE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151
Query: 205 FCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGT 263
FCY+ND VLGIL L + R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGT
Sbjct: 152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211
Query: 264 GHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSG 323
G + DVG G+G++Y++NVP+ DG+ DE + + ++++V + P AVVLQ GAD+++G
Sbjct: 212 GDVSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAG 271
Query: 324 DRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKL 383
D + FN++ G CL+++ + + ++LGGGGY + N ARCW Y T V +G +++
Sbjct: 272 DPMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331
Query: 384 PYNEYYEYFGPDYTLHVEP-CNMENLNAHKDMEKIRNTLLEQLSGLI 429
P +E++ +GPDY L + P C + H+ +++I N + L ++
Sbjct: 332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHR-VQQILNYIKGNLKHVV 377
>UNIPROTKB|Q5TEE2 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
Length = 211
Score = 535 (193.4 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 94/117 (80%), Positives = 109/117 (93%)
Query: 175 AAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHH 234
+AVKLN+ DIAVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLY+DID+HH
Sbjct: 95 SAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH 154
Query: 235 GDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDES 291
GDGVEEAFYTTDRVMTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES
Sbjct: 155 GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDES 211
Score = 279 (103.3 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 43/90 (47%), Positives = 71/90 (78%)
Query: 59 GKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIR 118
G +R+V Y+Y+ +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++
Sbjct: 6 GTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKR 148
++H+D+Y++FL S+ P++ + +S+ ++R
Sbjct: 66 KYHSDDYIKFLRSIRPDNMSE--YSKQMQR 93
>UNIPROTKB|Q0VCB2 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
[GO:0071922 "regulation of cohesin localization to chromatin"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
Length = 377
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 147/347 (42%), Positives = 221/347 (63%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSR 144
P R M H+LI Y LH++M + +P A ++ FHTD Y++ L VS + GD
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSED--GDDDHPD 92
Query: 145 HLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASG 204
++ + +G DCP +G+F + A G +I AA L G +A+NW+GG HHAKK EASG
Sbjct: 93 SIE-YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151
Query: 205 FCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGT 263
FCY+ND VLGIL L + R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGT
Sbjct: 152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211
Query: 264 GHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSG 323
G + DVG G+G++Y++NVP+ D + DE + + ++++V + P AVVLQ GAD+++G
Sbjct: 212 GDVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAG 271
Query: 324 DRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKL 383
D + FN++ G CL+++ + + ++LGGGGY + N ARCW Y T V +G +++
Sbjct: 272 DPMCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331
Query: 384 PYNEYYEYFGPDYTLHVEP-CNMENLNAHKDMEKIRNTLLEQLSGLI 429
P +E++ +GPDY L + P C + H+ +++I N + L ++
Sbjct: 332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHR-VQQILNYIKGNLKHVV 377
>UNIPROTKB|F1NFY6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
Length = 377
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 155/385 (40%), Positives = 233/385 (60%)
Query: 47 PTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHRRME 105
P A + +GP V+Y Y P +Y K P R M H+LI Y L M
Sbjct: 4 PGVAALMAAGPP-----VAYVYSP---EYAALCDSLCKVPKRASMVHSLIEAYSLLDHMM 55
Query: 106 VNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFC 165
+ +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F +
Sbjct: 56 IIKPKVASMEEMASFHTDAYLQHLQKVSEE--GDDDHPESVE-YGLGYDCPATEGIFDYA 112
Query: 166 QASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRV 225
A G +I AA L G +A+NW GG HHAKK EASGFCY+ND VLGIL L + R+
Sbjct: 113 AAVGGATITAAQCLLDGKCKVAINWPGGWHHAKKDEASGFCYLNDAVLGILRLRQKFDRI 172
Query: 226 LYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLN 284
LY+D+D+HHGDGVE+AF T +VMTVS HKF FFPGTG + D+G G+G++Y++NVP+
Sbjct: 173 LYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDIGLGKGRYYSVNVPIQ 232
Query: 285 DGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLR 344
DG+ DE + + ++++V + P+AVVLQ GAD+++GD + FN++ +G CL+++
Sbjct: 233 DGIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAGDPMCSFNMTPEGVGKCLKYVL 292
Query: 345 SFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCN 404
+ + ++LGGGGY + N ARCW Y T V +G +++P +E++ +GPDY L + P
Sbjct: 293 QWQLATLILGGGGYNLANTARCWTYLTGVILGRTLSSEIPDHEFFTEYGPDYVLEITPSC 352
Query: 405 MENLNAHKDMEKIRNTLLEQLSGLI 429
+ N + +++I N + L ++
Sbjct: 353 RPDRNDPQRIQEILNLIKGNLKHVV 377
>UNIPROTKB|E2RQK6 [details] [associations]
symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
Length = 383
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 155/386 (40%), Positives = 223/386 (57%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAE-----SGQSLPPVYIYSP---EYVSMCDSLAKVPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E D S + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDS---VEYGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNV 281
R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGTG + DVG G+G++Y++NV
Sbjct: 170 DRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNV 229
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLR 341
P+ DG+ DE + + ++++V + P AVVLQ GAD+++GD + FN++ G CL+
Sbjct: 230 PIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLK 289
Query: 342 FLRSFNVPLMVLGG--GGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLH 399
++ + + ++LGG GGY + N ARCW Y T V +G +++P +E P L
Sbjct: 290 YILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSEIPDHEVKSCLSPVSVLI 349
Query: 400 VEPCNMENLNAHKDMEKIRNTLLEQL 425
+ ++H + ++L Q+
Sbjct: 350 IPYLKAYPFSSHSPPH-LAGSMLSQI 374
>UNIPROTKB|F5GXM1 [details] [associations]
symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
Bgee:F5GXM1 Uniprot:F5GXM1
Length = 289
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 122/192 (63%), Positives = 159/192 (82%)
Query: 249 MTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQ 308
MTVSFHK+G++FPGTG ++D+GAG+GK+YA+N PL DG+DDES+ +F+P++ KVME++Q
Sbjct: 1 MTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQ 60
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWC 368
P AVVLQCG+DSLSGDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGYTIRNVARCW
Sbjct: 61 PSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWT 120
Query: 369 YETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGL 428
YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N ++ +EKI+ L E L L
Sbjct: 121 YETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRML 180
Query: 429 IHAPSVPFQTTP 440
HAP V Q P
Sbjct: 181 PHAPGVQMQAIP 192
>UNIPROTKB|H3BM24 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
Ensembl:ENST00000425835 Bgee:H3BM24 Uniprot:H3BM24
Length = 161
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 104/158 (65%), Positives = 131/158 (82%)
Query: 63 RVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHT 122
+V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+
Sbjct: 1 KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHS 60
Query: 123 DEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRG 182
DEY++FL S+ P++ + +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVKLNR
Sbjct: 61 DEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 118
Query: 183 DADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLK 220
D+AVNWAGGLHHAKKSEASGFCYVNDIVL ILELLK
Sbjct: 119 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLK 156
>UNIPROTKB|A6NGJ7 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
Bgee:A6NGJ7 Uniprot:A6NGJ7
Length = 248
Score = 545 (196.9 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 95/200 (47%), Positives = 140/200 (70%)
Query: 191 AGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMT 250
A LH + EASGFCY+ND VLGIL L + R+LYVD+D+HHGDGVE+AF T +VMT
Sbjct: 47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMT 106
Query: 251 VSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQP 309
VS HKF FFPGTG + DVG G+G++Y++NVP+ DG+ DE + + ++++V + + P
Sbjct: 107 VSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNP 166
Query: 310 DAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCY 369
AVVLQ GAD+++GD + FN++ G CL+++ + + ++LGGGGY + N ARCW Y
Sbjct: 167 KAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTY 226
Query: 370 ETAVAVGVEPDNKLPYNEYY 389
T V +G +++P +E++
Sbjct: 227 LTGVILGKTLSSEIPDHEFF 246
Score = 61 (26.5 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 22/62 (35%), Positives = 27/62 (43%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RM 104
+M
Sbjct: 53 QM 54
>RGD|1309799 [details] [associations]
symbol:Hdac1 "histone deacetylase 1" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0007492 "endoderm development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008285 "negative regulation of
cell proliferation" evidence=IDA] [GO:0009913 "epidermal cell
differentiation" evidence=ISO] [GO:0010870 "positive regulation of
receptor biosynthetic process" evidence=ISO] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0016580 "Sin3 complex"
evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0021766 "hippocampus
development" evidence=ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0033613 "activating transcription factor binding" evidence=ISO]
[GO:0034599 "cellular response to oxidative stress" evidence=IDA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043922 "negative regulation
by host of viral transcription" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0048714
"positive regulation of oligodendrocyte differentiation"
evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=ISO] [GO:0060789 "hair follicle placode
formation" evidence=ISO] [GO:0061029 "eyelid development in
camera-type eye" evidence=ISO] [GO:0061198 "fungiform papilla
formation" evidence=ISO] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;IMP] [GO:0070933 "histone H4 deacetylation"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0010832 "negative regulation of myotube
differentiation" evidence=ISO] Pfam:PF00850 RGD:1309799 RGD:619975
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0045892 GO:GO:0008285
GO:GO:0043234 GO:GO:0032403 GO:GO:0042493 GO:GO:0034599
GO:GO:0043524 GO:GO:0000785 GO:GO:0070932 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AF321129 IPI:IPI00201536 UniGene:Rn.123394
ProteinModelPortal:Q99PA2 STRING:Q99PA2 InParanoid:Q99PA2
OMA:KCIACEE Genevestigator:Q99PA2 Uniprot:Q99PA2
Length = 256
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 98/161 (60%), Positives = 126/161 (78%)
Query: 280 NVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADC 339
N PL DG+DDES+ +F+P++ KVME++QP AVVLQCG+DSLSGDRLGCFNL++KGHA C
Sbjct: 1 NYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKC 60
Query: 340 LRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLH 399
+ F++SFN+P+++LGG GYTI NVARCW YETAVA+ E N+LPYN+Y+EYFGPD+ LH
Sbjct: 61 VEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLH 120
Query: 400 VEPCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
+ P NM N N ++ +EKI+ L E L L H P V Q P
Sbjct: 121 ISPSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIP 161
>UNIPROTKB|A6NMT1 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
Bgee:A6NMT1 Uniprot:A6NMT1
Length = 253
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 116/251 (46%), Positives = 154/251 (61%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNV 281
R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGTG + DVG G+G++Y++NV
Sbjct: 170 ERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNV 229
Query: 282 PLNDGLDDESF 292
P+ DG+ DE +
Sbjct: 230 PIQDGIQDEKY 240
>UNIPROTKB|I3L5X0 [details] [associations]
symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062889 EMBL:CU466457
Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
Length = 256
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 117/251 (46%), Positives = 156/251 (62%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A+ G G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAN---G--GQSLPPVYIYSP---EYVSMCDSLAKVPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNV 281
R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPGTG + DVG G+G++Y++NV
Sbjct: 170 DRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNV 229
Query: 282 PLNDGLDDESF 292
P+ DG+ DE +
Sbjct: 230 PIQDGIQDEKY 240
>UNIPROTKB|Q74DU3 [details] [associations]
symbol:GSU1222 "Histone deacetylase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 128/326 (39%), Positives = 174/326 (53%)
Query: 63 RVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVN-RPFP-AGPSDIRRF 120
R + Y + YG HP K R +A L+ YGL V P A + F
Sbjct: 4 RTALIYSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTF 63
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGE-DCPVFDGLFGFCQASAGGSIGAAVKL 179
H +Y++ L S F R+ +G+ D PVF GL+ + + AGG+I AA +
Sbjct: 64 HAPDYLDRLREFSESDDARADF-----RYGLGDLDNPVFRGLYDWARLGAGGTIEAARLV 118
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVE 239
DIA N AGG HHA +++ASGF Y+ND V+ I LL+ RV Y+DID HHGDGV+
Sbjct: 119 AEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQ 178
Query: 240 EAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EAFY TDRV+T+S H+ G FFPGTG + G G G Y++N+PL DD F F
Sbjct: 179 EAFYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDE 238
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
+ ++ Y PD +V Q GAD+ D L ++ + LR L++ +P + +GGGGY
Sbjct: 239 VAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIPWVAVGGGGY 298
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLP 384
+ NVAR W V GVE +LP
Sbjct: 299 NLVNVARAWTLAWGVMNGVELPPRLP 324
>TIGR_CMR|GSU_1222 [details] [associations]
symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
Uniprot:Q74DU3
Length = 385
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 128/326 (39%), Positives = 174/326 (53%)
Query: 63 RVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVN-RPFP-AGPSDIRRF 120
R + Y + YG HP K R +A L+ YGL V P A + F
Sbjct: 4 RTALIYSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTF 63
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGE-DCPVFDGLFGFCQASAGGSIGAAVKL 179
H +Y++ L S F R+ +G+ D PVF GL+ + + AGG+I AA +
Sbjct: 64 HAPDYLDRLREFSESDDARADF-----RYGLGDLDNPVFRGLYDWARLGAGGTIEAARLV 118
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVE 239
DIA N AGG HHA +++ASGF Y+ND V+ I LL+ RV Y+DID HHGDGV+
Sbjct: 119 AEEGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQ 178
Query: 240 EAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRP 298
EAFY TDRV+T+S H+ G FFPGTG + G G G Y++N+PL DD F F
Sbjct: 179 EAFYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDE 238
Query: 299 IIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 358
+ ++ Y PD +V Q GAD+ D L ++ + LR L++ +P + +GGGGY
Sbjct: 239 VAFPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIPWVAVGGGGY 298
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLP 384
+ NVAR W V GVE +LP
Sbjct: 299 NLVNVARAWTLAWGVMNGVELPPRLP 324
>UNIPROTKB|E7ENE4 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
Length = 272
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 114/251 (45%), Positives = 152/251 (60%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNV 281
R+LYVD+D+HHGDGVE+AF T +VMTVS HKF FFPG + DVG G+G++Y++NV
Sbjct: 170 ERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGKSDVSDVGLGKGRYYSVNV 229
Query: 282 PLNDGLDDESF 292
P+ DG+ DE +
Sbjct: 230 PIQDGIQDEKY 240
>CGD|CAL0001747 [details] [associations]
symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 458 (166.3 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 108/292 (36%), Positives = 166/292 (56%)
Query: 147 KRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKL-----NRGDADIAVNWAGGLHHAKKSE 201
+++ + DC F L + Q +A SI AA K+ D IAVNW GG HH KS
Sbjct: 148 EKYGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSH 207
Query: 202 ASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG-DFF 260
A+GFCYVND+VL I L K V Y+D+D+HHGDGVE AF + +V T S H++ F+
Sbjct: 208 AAGFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFY 267
Query: 261 PGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADS 320
PGTG +K + + Y N+P GL+D S + + I+ ++ + P A+V+QCG D
Sbjct: 268 PGTGSLK---SSRENTY--NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDG 322
Query: 321 LSGDRLGCFNLSVKGHADCLRFLRS-FN-VPLMVLGGGGYTIRNVARCWCYETAVAVGVE 378
L+ D +N+++KG+ D + ++ S F+ +P+M+LGGGGY+ A+CW Y T +GV
Sbjct: 323 LALDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVS 382
Query: 379 PDNK---LPYNEYYEYFGPD----YTLHVE-PCNMENLNAHKDMEKIRNTLL 422
+ LP ++ + + D +T H P M++ N+ + + I+ LL
Sbjct: 383 DIDTWDILPEHKNLDAYEKDGFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434
Score = 57 (25.1 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 110 FPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLK-----------------RFNVG 152
+PA D+ +H DE+V+ L + P + D +F++ K ++ +
Sbjct: 96 YPAQTKDLTTYHDDEFVKHL--MGPRTFLDKNFNKIDKAETDLTNIVIEENDLDEKYGLT 153
Query: 153 EDCPVFDGLFGFCQASAGGSIGAAVKL 179
DC F L + Q +A SI AA K+
Sbjct: 154 FDCYPFPSLDLYVQLTAASSINAARKI 180
>UNIPROTKB|Q59Q78 [details] [associations]
symbol:HOS1 "Likely histone deacetylase Hos1p"
species:237561 "Candida albicans SC5314" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
KEGG:cal:CaO19.4411 Uniprot:Q59Q78
Length = 436
Score = 458 (166.3 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 108/292 (36%), Positives = 166/292 (56%)
Query: 147 KRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKL-----NRGDADIAVNWAGGLHHAKKSE 201
+++ + DC F L + Q +A SI AA K+ D IAVNW GG HH KS
Sbjct: 148 EKYGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSH 207
Query: 202 ASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG-DFF 260
A+GFCYVND+VL I L K V Y+D+D+HHGDGVE AF + +V T S H++ F+
Sbjct: 208 AAGFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFY 267
Query: 261 PGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADS 320
PGTG +K + + Y N+P GL+D S + + I+ ++ + P A+V+QCG D
Sbjct: 268 PGTGSLK---SSRENTY--NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDG 322
Query: 321 LSGDRLGCFNLSVKGHADCLRFLRS-FN-VPLMVLGGGGYTIRNVARCWCYETAVAVGVE 378
L+ D +N+++KG+ D + ++ S F+ +P+M+LGGGGY+ A+CW Y T +GV
Sbjct: 323 LALDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVS 382
Query: 379 PDNK---LPYNEYYEYFGPD----YTLHVE-PCNMENLNAHKDMEKIRNTLL 422
+ LP ++ + + D +T H P M++ N+ + + I+ LL
Sbjct: 383 DIDTWDILPEHKNLDAYEKDGFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434
Score = 57 (25.1 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 110 FPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLK-----------------RFNVG 152
+PA D+ +H DE+V+ L + P + D +F++ K ++ +
Sbjct: 96 YPAQTKDLTTYHDDEFVKHL--MGPRTFLDKNFNKIDKAETDLTNIVIEENDLDEKYGLT 153
Query: 153 EDCPVFDGLFGFCQASAGGSIGAAVKL 179
DC F L + Q +A SI AA K+
Sbjct: 154 FDCYPFPSLDLYVQLTAASSINAARKI 180
>SGD|S000006272 [details] [associations]
symbol:HOS1 "Class I histone deacetylase (HDAC) family
member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
GermOnline:YPR068C Uniprot:Q12214
Length = 470
Score = 430 (156.4 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 85/229 (37%), Positives = 135/229 (58%)
Query: 147 KRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFC 206
K++N+ DCP+F L +CQ G ++ L+ + I +NW GG HHA K ASGFC
Sbjct: 162 KQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFC 221
Query: 207 YVNDIVLGILELLKVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTG 264
Y+ND+VL I L K ++ YVD D+HHGDGVE+AF + ++ T+S H + FFPGTG
Sbjct: 222 YINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTG 281
Query: 265 HIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGD 324
+ D + +N+PL G DD + I+ ++E ++P+A++++CG D L GD
Sbjct: 282 SLSDSRKDKN---VVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGD 338
Query: 325 RLGCFNLSVKGHADCL-RFLRSF-NVPLMVLGGGGYTIRNVARCWCYET 371
R + L+++G + + ++S+ + +LGGGGY ++R + Y T
Sbjct: 339 RFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387
Score = 58 (25.5 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 82 PMKPH-RIRMAHNLIVHYGLHRRMEVNRPFP-AGPSDIRRFHTDEYVEFL 129
P H + ++ ++LI Y L + + FP A D+ FH+ Y+++L
Sbjct: 20 PCNNHQKSQLTYSLINAYDLLQHFDEVLTFPYARKDDLLEFHSKSYIDYL 69
>TIGR_CMR|SPO_2177 [details] [associations]
symbol:SPO_2177 "acetoin utilization protein AcuC"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
Uniprot:Q5LRF3
Length = 368
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 112/311 (36%), Positives = 158/311 (50%)
Query: 77 YGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPES 136
YG HP+ R+ +L G + A P+ +R FHT +Y+ L E
Sbjct: 13 YGAVHPLAIPRVSTVIDLCRAMGWFAPGQYRTSPRARPAALRAFHTPDYIAALQQAEAEQ 72
Query: 137 S-GDPSFSRHLKRFNVGE-DCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGL 194
+ + + +RH +G PVF ++ +AGGS+ AA + RG N GG
Sbjct: 73 AVSEETRARH----GLGTLPNPVFAEMYRRPATAAGGSLLAAELVARGHR--VFNPGGGT 126
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
HH A GFCY+ND VL IL L ++ RV YVDID HH DGV AF + V +S
Sbjct: 127 HHGFADRAGGFCYLNDPVLAILALQRLGCARVAYVDIDAHHCDGVASAFQGSQTVRMISI 186
Query: 254 HKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVV 313
H+ +P TG ++D G ALN+P+ L+D ++ + +I + ++PDAVV
Sbjct: 187 HE-ARRWPFTGALEDDAGGA----ALNLPVARDLNDSAYALILDRLILPAVAGFRPDAVV 241
Query: 314 LQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAV 373
LQCGAD+++ D L LS H D +R L + L+VLGGGGY +VAR W A
Sbjct: 242 LQCGADAVAEDPLSRLALSNCAHRDTVRALAALCPRLLVLGGGGYNPWSVARAWTGVWAT 301
Query: 374 AVGVEPDNKLP 384
G E ++LP
Sbjct: 302 LSGAEIPDRLP 312
>UNIPROTKB|B4DQE7 [details] [associations]
symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
deacetylase activity" evidence=IEA] InterPro:IPR003084
PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
Ensembl:ENST00000429103 Uniprot:B4DQE7
Length = 182
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 71/183 (38%), Positives = 118/183 (64%)
Query: 249 MTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVY 307
MTVS HKF FFPGTG + DVG G+G++Y++NVP+ DG+ DE + + ++++V + +
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAF 60
Query: 308 QPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCW 367
P AVVLQ GAD+++GD + FN++ G CL+++ + + ++LGGGGY + N ARCW
Sbjct: 61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCW 120
Query: 368 CYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEP-CNMENLNAHKDMEKIRNTLLEQLS 426
Y T V +G +++P +E++ +GPDY L + P C + H+ +++I N + L
Sbjct: 121 TYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHR-IQQILNYIKGNLK 179
Query: 427 GLI 429
++
Sbjct: 180 HVV 182
>UNIPROTKB|Q81KS2 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 95/313 (30%), Positives = 156/313 (49%)
Query: 65 SYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDE 124
++ Y Y + HP R+ + ++L+ G ++ P A +I HT+E
Sbjct: 4 AFIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEE 63
Query: 125 YVEFLASVSPESSGDPSFSRHLKR-FNVG-EDCPVFDGLFGFCQASAGGSIGAAVKLNRG 182
Y+ + + +G+ + + + +G ED P+F + GG++ A + G
Sbjct: 64 YINAV-----KRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSG 118
Query: 183 DADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR-RVLYVDIDVHHGDGVEEA 241
A+N GGLHH + +ASGFC ND + + + K + RVLY+D D HHGDGV+ +
Sbjct: 119 KVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWS 178
Query: 242 FYTTDRVMTVSFHKFGDF-FPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY V T+S H+ G + FPGTG + + G G G Y+ NVPL+ +DESF +R ++
Sbjct: 179 FYDDPNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVV 238
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPL-----MVLGG 355
++V ++PD ++ Q GAD+ D L ++ + + + R + +GG
Sbjct: 239 KEVAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGG 298
Query: 356 GGYTI-RNVARCW 367
GGY R V R W
Sbjct: 299 GGYDHWRVVPRAW 311
>TIGR_CMR|BA_4918 [details] [associations]
symbol:BA_4918 "acetoin utilization protein AcuC"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0006091 "generation of
precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
DNASU:1086757 EnsemblBacteria:EBBACT00000011277
EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
BioCyc:BANT260799:GJAJ-4620-MONOMER
BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
Length = 388
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 95/313 (30%), Positives = 156/313 (49%)
Query: 65 SYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDE 124
++ Y Y + HP R+ + ++L+ G ++ P A +I HT+E
Sbjct: 4 AFIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEE 63
Query: 125 YVEFLASVSPESSGDPSFSRHLKR-FNVG-EDCPVFDGLFGFCQASAGGSIGAAVKLNRG 182
Y+ + + +G+ + + + +G ED P+F + GG++ A + G
Sbjct: 64 YINAV-----KRAGEGKLEKSIAMTYGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSG 118
Query: 183 DADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR-RVLYVDIDVHHGDGVEEA 241
A+N GGLHH + +ASGFC ND + + + K + RVLY+D D HHGDGV+ +
Sbjct: 119 KVKHALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWS 178
Query: 242 FYTTDRVMTVSFHKFGDF-FPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPII 300
FY V T+S H+ G + FPGTG + + G G G Y+ NVPL+ +DESF +R ++
Sbjct: 179 FYDDPNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVV 238
Query: 301 QKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPL-----MVLGG 355
++V ++PD ++ Q GAD+ D L ++ + + + R + +GG
Sbjct: 239 KEVAAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGG 298
Query: 356 GGYTI-RNVARCW 367
GGY R V R W
Sbjct: 299 GGYDHWRVVPRAW 311
>UNIPROTKB|Q3AFN8 [details] [associations]
symbol:acuC "Acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 105/320 (32%), Positives = 159/320 (49%)
Query: 75 YYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSP 134
Y + HP+ P R +A L+ + + E+ P A ++ H YVE + ++S
Sbjct: 16 YRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHDPAYVEAVMNLSK 75
Query: 135 ESSGDPSFSRHLKRFNVG-EDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGG 193
+P + + RF +G ED PVF G+ AGGS A + G+AD N AGG
Sbjct: 76 ----NPE-NVNGSRFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYEGEADHVFNIAGG 130
Query: 194 LHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
LHHA + ASGFC ND+ + I + + +V YVD+D HHGDGV+ FY+ V+T+S
Sbjct: 131 LHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTISI 190
Query: 254 HKFGDF-FPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAV 312
H+ G + FPGTG I ++G G +N+PL +D+S+ I+ +++ ++PD +
Sbjct: 191 HETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDIL 250
Query: 313 VLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPL-----MVLGGGGYTI-RNVARC 366
V Q G DS D L + + + L + + GGGGY R V R
Sbjct: 251 VTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGYDYWRVVPRA 310
Query: 367 WCYETAVAVGVEPDNKLPYN 386
W T V + + LPY+
Sbjct: 311 W---TIVWAEMT-ERSLPYD 326
>TIGR_CMR|CHY_0174 [details] [associations]
symbol:CHY_0174 "acetoin utilization protein AcuC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006091
"generation of precursor metabolites and energy" evidence=ISS]
[GO:0045150 "acetoin catabolic process" evidence=ISS]
InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
Length = 383
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 105/320 (32%), Positives = 159/320 (49%)
Query: 75 YYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSP 134
Y + HP+ P R +A L+ + + E+ P A ++ H YVE + ++S
Sbjct: 16 YRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHDPAYVEAVMNLSK 75
Query: 135 ESSGDPSFSRHLKRFNVG-EDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGG 193
+P + + RF +G ED PVF G+ AGGS A + G+AD N AGG
Sbjct: 76 ----NPE-NVNGSRFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYEGEADHVFNIAGG 130
Query: 194 LHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
LHHA + ASGFC ND+ + I + + +V YVD+D HHGDGV+ FY+ V+T+S
Sbjct: 131 LHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTISI 190
Query: 254 HKFGDF-FPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAV 312
H+ G + FPGTG I ++G G +N+PL +D+S+ I+ +++ ++PD +
Sbjct: 191 HETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDIL 250
Query: 313 VLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPL-----MVLGGGGYTI-RNVARC 366
V Q G DS D L + + + L + + GGGGY R V R
Sbjct: 251 VTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGYDYWRVVPRA 310
Query: 367 WCYETAVAVGVEPDNKLPYN 386
W T V + + LPY+
Sbjct: 311 W---TIVWAEMT-ERSLPYD 326
>UNIPROTKB|E7EVA8 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
Uniprot:E7EVA8
Length = 299
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 95/237 (40%), Positives = 127/237 (53%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYAL 279
R+LYVD+D+HHGDG T D V V K G ++ I+D G K+Y +
Sbjct: 170 ERILYVDLDLHHGDG------TGD-VSDVGLGK-GRYYSVNVPIQD-GIQDEKYYQI 217
Score = 298 (110.0 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 52/132 (39%), Positives = 86/132 (65%)
Query: 246 DRVMTVSFH-KFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVM 304
+R++ V GD GTG + DVG G+G++Y++NVP+ DG+ DE + + ++++V
Sbjct: 170 ERILYVDLDLHHGD---GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVY 226
Query: 305 EVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVA 364
+ + P AVVLQ GAD+++GD + FN++ G CL+++ + + ++LGGGGY + N A
Sbjct: 227 QAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTA 286
Query: 365 RCWCYETAVAVG 376
RCW Y T V +G
Sbjct: 287 RCWTYLTGVILG 298
>UNIPROTKB|E7EW22 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
Length = 185
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 83/194 (42%), Positives = 110/194 (56%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH 222
+ A G +I AA L G +A+NW+GG HHAKK EASGFCY+ND VLGIL L +
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKF 169
Query: 223 RRVLYVDIDVHHGD 236
R+LYVD+D+HHGD
Sbjct: 170 ERILYVDLDLHHGD 183
>UNIPROTKB|E5RG37 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976554 ProteinModelPortal:E5RG37 SMR:E5RG37
Ensembl:ENST00000523628 ArrayExpress:E5RG37 Bgee:E5RG37
Uniprot:E5RG37
Length = 103
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 59/105 (56%), Positives = 82/105 (78%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSF 142
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--Y 58
Query: 143 SRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIA 187
S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVKLNR D+A
Sbjct: 59 SKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMA 103
>CGD|CAL0003359 [details] [associations]
symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
"histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
[GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
"mating-type region heterochromatin" evidence=IEA] [GO:0031933
"telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:1900743
"positive regulation of filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0071469
"cellular response to alkalinity" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
regulation of filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010621 "negative
regulation of transcription by transcription factor localization"
evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
telomere" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
"negative regulation of chromatin silencing involved in replicative
cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 347 (127.2 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 96/331 (29%), Positives = 166/331 (50%)
Query: 77 YGQGHPMKPHRIRMAHNLIVHYGL---HRRMEVNR--PF----P---AGPSDIRRFHTDE 124
Y HP P RI + +V G+ +N PF P A +I + H+++
Sbjct: 140 YIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREATSEEILQVHSED 199
Query: 125 YVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGA--AVKLNRG 182
+++F+ +S+ D S + LK G+ V + + + S GG+I A AV R
Sbjct: 200 HLKFI-----QSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRV 254
Query: 183 DADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH----RRVLYVDIDVHHGDGV 238
+A+ G HHA+ + +GFC +++ + +LK + RR++ VD D+HHG+G
Sbjct: 255 KNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDIHHGNGT 313
Query: 239 EEAFYTTDRVMTVSFHKF--GDFFPGT--GHIKDVGAGQGKFYALNVPL-NDGLDDESFR 293
++AFY RV+ +S H+F G F+PGT G + VG G G+ + +N+P + G+ D +
Sbjct: 314 QKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRSSGMHDGDYV 373
Query: 294 GLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMV 352
F IIQ V+ + PD +++ G D+ GD +G +++ G+ L+ L V
Sbjct: 374 YAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIARGKLAV 433
Query: 353 LGGGGYTIRNVARCWCYETAVAVGVEPDNKL 383
+ GGY + ++++ V VG P+N +
Sbjct: 434 ILEGGYNLDSISKSALAVAKVLVGEPPENTI 464
>UNIPROTKB|Q5A960 [details] [associations]
symbol:HDA1 "Likely class II histone deacetylase subunit
Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
population of unicellular organisms in response to pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
[GO:1900239 "regulation of phenotypic switching" evidence=IMP]
[GO:1900436 "positive regulation of filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:1900445 "positive regulation of filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
GO:GO:1900743 Uniprot:Q5A960
Length = 833
Score = 347 (127.2 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 96/331 (29%), Positives = 166/331 (50%)
Query: 77 YGQGHPMKPHRIRMAHNLIVHYGL---HRRMEVNR--PF----P---AGPSDIRRFHTDE 124
Y HP P RI + +V G+ +N PF P A +I + H+++
Sbjct: 140 YIDPHPEDPRRIYRIYKKLVEAGIVLDPSLAGINEIGPFMLKIPIREATSEEILQVHSED 199
Query: 125 YVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGA--AVKLNRG 182
+++F+ +S+ D S + LK G+ V + + + S GG+I A AV R
Sbjct: 200 HLKFI-----QSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRV 254
Query: 183 DADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH----RRVLYVDIDVHHGDGV 238
+A+ G HHA+ + +GFC +++ + +LK + RR++ VD D+HHG+G
Sbjct: 255 KNSLAIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVIVDWDIHHGNGT 313
Query: 239 EEAFYTTDRVMTVSFHKF--GDFFPGT--GHIKDVGAGQGKFYALNVPL-NDGLDDESFR 293
++AFY RV+ +S H+F G F+PGT G + VG G G+ + +N+P + G+ D +
Sbjct: 314 QKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPWRSSGMHDGDYV 373
Query: 294 GLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMV 352
F IIQ V+ + PD +++ G D+ GD +G +++ G+ L+ L V
Sbjct: 374 YAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHTLKGIARGKLAV 433
Query: 353 LGGGGYTIRNVARCWCYETAVAVGVEPDNKL 383
+ GGY + ++++ V VG P+N +
Sbjct: 434 ILEGGYNLDSISKSALAVAKVLVGEPPENTI 464
>UNIPROTKB|F1RPM1 [details] [associations]
symbol:LOC100625846 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
Length = 142
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 60/142 (42%), Positives = 94/142 (66%)
Query: 249 MTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVY 307
MTVS HKF FFPGTG + DVG G+G++Y++NVP+ DG+ DE + + ++++V +
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAF 60
Query: 308 QPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGG--GGYTIRNVAR 365
P AVVLQ GAD+++GD + FN++ G CL+++ + + ++LGG GGY + N AR
Sbjct: 61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTAR 120
Query: 366 CWCYETAVAVGVEPDNKLPYNE 387
CW Y T V +G +++P +E
Sbjct: 121 CWTYLTGVILGKTLSSEIPDHE 142
>UNIPROTKB|E5RH52 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00980006 ProteinModelPortal:E5RH52 SMR:E5RH52
Ensembl:ENST00000521610 ArrayExpress:E5RH52 Bgee:E5RH52
Uniprot:E5RH52
Length = 100
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 57/99 (57%), Positives = 79/99 (79%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSF 142
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--Y 58
Query: 143 SRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNR 181
S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ AVKLNR
Sbjct: 59 SKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNR 97
>UNIPROTKB|F1N0W0 [details] [associations]
symbol:HDAC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
of multicellular organism growth" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=IEA] [GO:0032922 "circadian
regulation of gene expression" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] INTERPRO:IPR000286
GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
GO:GO:0040014 GO:GO:0000122 GO:GO:0032922 GO:GO:0046329
GO:GO:0031490 GO:GO:0005876 GO:GO:0016575 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 OMA:GGECVEY
GeneTree:ENSGT00530000062889 GO:GO:0033558 EMBL:DAAA02020441
EMBL:DAAA02020442 IPI:IPI00688242 Ensembl:ENSBTAT00000023086
Uniprot:F1N0W0
Length = 163
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 57/117 (48%), Positives = 81/117 (69%)
Query: 327 GCFNLSVKGHA-DCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPY 385
GC+ +G +C+ +++SFN+PL+VLGGGGYT+RNVARCW YET++ V +LPY
Sbjct: 1 GCWGQRDRGRGGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPY 60
Query: 386 NEYYEYFGPDYTLHVE-PCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTPA 441
+EY+EYF PD+TLH + +EN N+ + +++IR T+ E L L HAPSV PA
Sbjct: 61 SEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPA 117
>UNIPROTKB|E5RFP9 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00974336 ProteinModelPortal:E5RFP9 SMR:E5RFP9
Ensembl:ENST00000521163 ArrayExpress:E5RFP9 Bgee:E5RFP9
Uniprot:E5RFP9
Length = 109
Score = 308 (113.5 bits), Expect = 2.1e-27, P = 2.1e-27
Identities = 53/105 (50%), Positives = 79/105 (75%)
Query: 59 GKKRRVSYFYEPT-------IGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFP 111
G K++V Y+Y+ IG+YYYGQGHPMKPHRIRM HNL+++YGL+R+ME+ RP
Sbjct: 7 GGKKKVCYYYDVCVFSILGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHK 66
Query: 112 AGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCP 156
A ++ ++H+DEY++FL S+ P++ + +S+ ++RFNVGEDCP
Sbjct: 67 ATAEEMTKYHSDEYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCP 109
>UNIPROTKB|C9J8F0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00878343
ProteinModelPortal:C9J8F0 SMR:C9J8F0 STRING:C9J8F0 PRIDE:C9J8F0
Ensembl:ENST00000421523 BindingDB:C9J8F0 ArrayExpress:C9J8F0
Bgee:C9J8F0 Uniprot:C9J8F0
Length = 132
Score = 298 (110.0 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 60/135 (44%), Positives = 82/135 (60%)
Query: 90 MAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRF 149
M H+LI Y LH++M + +P A ++ FHTD Y++ L VS E GD ++ +
Sbjct: 1 MVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-Y 57
Query: 150 NVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVN 209
+G DCP +G+F + A G +I AA L G +A+NW+GG HHAKK EASGFCY+N
Sbjct: 58 GLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLN 117
Query: 210 DIVLGILELLKVHRR 224
D VLGIL L + R
Sbjct: 118 DAVLGILRLRRKFER 132
>SGD|S000004966 [details] [associations]
symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
deacetylase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IMP] [GO:0001308 "negative regulation of chromatin
silencing involved in replicative cell aging" evidence=IGI;IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
"histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
transcription by chromatin organization" evidence=IMP] [GO:0010621
"negative regulation of transcription by transcription factor
localization" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0010978 "gene silencing involved in chronological cell aging"
evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
"histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
GO:GO:0010621 Uniprot:P53973
Length = 706
Score = 316 (116.3 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 101/349 (28%), Positives = 163/349 (46%)
Query: 63 RVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRR-----------MEVNRPFP 111
R+ Y + + Y HP P RI + ++ GL + + P
Sbjct: 65 RMRYHAKIFTSYFEYIDPHPEDPRRIYRIYKILAENGLINDPTLSGVDDLGDLMLKIPVR 124
Query: 112 AGPSD-IRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAG 170
A S+ I HT E++EF+ ES+ S LK G+ + + + G
Sbjct: 125 AATSEEILEVHTKEHLEFI-----ESTEKMSREELLKETEKGDSVYFNNDSYASARLPCG 179
Query: 171 GSIGA--AVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH----RR 224
G+I A AV R +AV G HHA+ A GFC +++ + +LK + RR
Sbjct: 180 GAIEACKAVVEGRVKNSLAVVRPPG-HHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRR 238
Query: 225 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGT--GHIKDVGAGQGKFYALN 280
++ +D D+HHG+G +++FY D+V+ VS H+F G ++PGT G G G+G+ + N
Sbjct: 239 IMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCN 298
Query: 281 V--PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLG-CF-NLSVKGH 336
+ P+ G+ D + F ++ + ++PD V++ G D+ GD +G C S GH
Sbjct: 299 ITWPVG-GVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGH 357
Query: 337 -ADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLP 384
L+ L N L V+ GGY + +AR V +G EP ++LP
Sbjct: 358 MTHMLKSLARGN--LCVVLEGGYNLDAIARSALSVAKVLIG-EPPDELP 403
>UNIPROTKB|E5RHE7 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00979387 ProteinModelPortal:E5RHE7 SMR:E5RHE7
Ensembl:ENST00000522371 ArrayExpress:E5RHE7 Bgee:E5RHE7
Uniprot:E5RHE7
Length = 86
Score = 292 (107.8 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 49/88 (55%), Positives = 70/88 (79%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSF 142
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--Y 58
Query: 143 SRHLKRFNVGEDCPVFDGLFGFCQASAG 170
S+ ++RFNVGEDCPVFDGLF FCQ S G
Sbjct: 59 SKQMQRFNVGEDCPVFDGLFEFCQLSTG 86
>UNIPROTKB|Q4KBB7 [details] [associations]
symbol:PFL_3361 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
OMA:PGSYEIA ProtClustDB:CLSK868223
BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
Length = 377
Score = 288 (106.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 85/296 (28%), Positives = 141/296 (47%)
Query: 80 GHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
GH P R +L+ GL R++ + A D+ R H+ Y++ ++S G
Sbjct: 42 GHAESPETKRRLKSLMDVSGLTRQLHLRSAAAATEDDLLRVHSAAYLQRFKALSDAGGG- 100
Query: 140 PSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGL-HHAK 198
HL G++ PV G + Q SAG ++ A + G+AD A + + HH
Sbjct: 101 -----HL-----GDEAPVGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCT 150
Query: 199 KSEASGFCYVNDIVLGILELLKVHR---RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHK 255
+ +A GFC++ +I + I E K +V +D DVHHG+G + F V+T+S H+
Sbjct: 151 RDQAMGFCFLANIAIAI-EAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQ 209
Query: 256 FGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQ 315
G F PG G +D G G G +N+PL G +++ + I+ +E ++P+ +++
Sbjct: 210 DGCFPPGYGGEQDRGRGAGLGCNINIPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVA 269
Query: 316 CGADSLSGDRLGCFNL---SVKGHADCLRFL--RSFNVPLMVLGGGGYTIRNVARC 366
CG D+ + D L L S + CL+ R L+++ GGY+ V C
Sbjct: 270 CGYDANAVDPLARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFC 325
>TAIR|locus:2201826 [details] [associations]
symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
Uniprot:Q94EJ2
Length = 377
Score = 285 (105.4 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 88/312 (28%), Positives = 145/312 (46%)
Query: 68 YEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVE 127
Y+P D + HP R+R +++ + + PA S++ FHT EY+E
Sbjct: 28 YDPGFLDVL--EKHPENADRVRNMLSILRRGPIAPHVNWFTGLPAIVSELLMFHTSEYIE 85
Query: 128 FLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN--RGDAD 185
L V + SG+ R + + G + +AG ++ A + G
Sbjct: 86 KL--VEADKSGE--------RCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILDCHGKIA 135
Query: 186 IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFY 243
A+ G HH++ ++A G+C++N+ L + L RV +DIDVH+G+G E FY
Sbjct: 136 YALVRPPG-HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFY 194
Query: 244 TTDRVMTVSFH----KFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPI 299
T+D+V+TVS H +G P G I ++G G Y LNVPL +G D + +
Sbjct: 195 TSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDRGYEYAMNEL 254
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-----NVPLMVLG 354
+ + + PD VVL G DS + D G +L++ G+ + +R + L+++
Sbjct: 255 VVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHGRLLMVQ 314
Query: 355 GGGYTIRNVARC 366
GGY + A C
Sbjct: 315 EGGYHVTYAAYC 326
>TAIR|locus:2095087 [details] [associations]
symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
OMA:QNKSVLY Uniprot:F4J8S1
Length = 564
Score = 300 (110.7 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 87/313 (27%), Positives = 148/313 (47%)
Query: 79 QGHPMKPHRIRMAHNLIVHYGLH--RRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPES 136
Q HP +P R+R + G+ R + +N +++ HT E+V+ + + S
Sbjct: 169 QPHPERPDRLRAIAASLATAGVFPGRCLPINAR-EITKQELQMVHTSEHVDAVDTTSQLL 227
Query: 137 SGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHH 196
+ + ++ + GL C A VK G A V G HH
Sbjct: 228 YSYFTSDTYANEYSA-RAARLAAGL---CADLATDIFTGRVK--NGFA--LVRPPG--HH 277
Query: 197 AKKSEASGFCYVNDIVLGILELLKVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHK 255
A A GFC N+ + L ++VL VD DVHHG+G +E F V+ +S H+
Sbjct: 278 AGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHR 337
Query: 256 F--GDFFPGTGHIKDVGAGQGKFYALNVPLN-DGLDDESFRGLFRPIIQKVMEVYQPDAV 312
G+F+PGTG +VG+ G+ Y +NVP + G+ D+ + F+ ++ + + PD V
Sbjct: 338 HEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFV 397
Query: 313 VLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCYET 371
++ G D+ GD LGC +++ G++ + L ++V+ GGY +R+++
Sbjct: 398 IISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATAVI 457
Query: 372 AVAVGVEPDNKLP 384
V +G P+N+LP
Sbjct: 458 KVLLGENPENELP 470
>TAIR|locus:2076053 [details] [associations]
symbol:hda17 "histone deacetylase 17" species:3702
"Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0016575
"histone deacetylation" evidence=IEA] INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL353818 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 HSSP:Q9BY41 HOGENOM:HOG000112868
ProtClustDB:CLSN2684485 EMBL:BT014712 IPI:IPI00519666 PIR:T48929
RefSeq:NP_190035.1 UniGene:At.66492 ProteinModelPortal:Q9LXN8
SMR:Q9LXN8 PaxDb:Q9LXN8 EnsemblPlants:AT3G44490.1 GeneID:823574
KEGG:ath:AT3G44490 TAIR:At3g44490 InParanoid:Q9LXN8 OMA:GGECVEY
PhylomeDB:Q9LXN8 Genevestigator:Q9LXN8 Uniprot:Q9LXN8
Length = 158
Score = 278 (102.9 bits), Expect = 6.3e-24, P = 6.3e-24
Identities = 49/112 (43%), Positives = 73/112 (65%)
Query: 329 FNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEY 388
F++ GHA+C++F++ FN+PL+V GGGGYT NVARCW ET + + E N++ N+Y
Sbjct: 3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDY 62
Query: 389 YEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGLIHAPSVPFQTTP 440
+YF PD++L + ++ENLN + I+ +LE L + HAPSV Q P
Sbjct: 63 IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVP 114
>UNIPROTKB|Q4K950 [details] [associations]
symbol:aphA_2 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
Uniprot:Q4K950
Length = 341
Score = 253 (94.1 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 66/214 (30%), Positives = 106/214 (49%)
Query: 155 CPVFDGLFGFCQASAGGSIGAAVKLNRGD-ADIAVNWAGGLHHAKKSEASGFCYVNDIVL 213
CPV + + SA ++ A L G+ A A+ G HHA+ A GFCY+N+ +
Sbjct: 116 CPVGESTWRAAYWSAQSAVAGAQALLDGEPAAYALCRPPG-HHARSEAAGGFCYLNNAAI 174
Query: 214 GILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD---FFPGT-GHIKDV 269
L + RV +D D+HHG G++E FY V+ VS H GD F+PG G ++
Sbjct: 175 AAQVLRDKYARVAVLDTDMHHGQGIQEIFYERADVLYVSVH--GDPTNFYPGVAGFAEER 232
Query: 270 GAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF 329
GAG G+ Y LN+P+ G + F ++ V + + + +VL G D D
Sbjct: 233 GAGAGEGYNLNLPMAHGASEGDFLARLEQALEAV-KAFDAEVLVLSLGFDIYELDPQSKV 291
Query: 330 NLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNV 363
++ G A + +RS +P +++ GGY + ++
Sbjct: 292 AVTRDGFAILGQRIRSLGLPCLIVQEGGYHLESL 325
Score = 46 (21.3 bits), Expect = 6.6e-24, Sum P(2) = 6.6e-24
Identities = 18/74 (24%), Positives = 25/74 (33%)
Query: 76 YYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVS-- 133
YY +G P + +V V +P AG + + H Y+ FL
Sbjct: 17 YYSRGQMRIPQEVPERAQRLVQAAHSLGFAVEQPRDAGMAPLLAVHGAPYLAFLQDAHQG 76
Query: 134 ----PESSGDPSFS 143
PE GD S
Sbjct: 77 WKDIPEDWGDEVMS 90
>ASPGD|ASPL0000014944 [details] [associations]
symbol:hdaA species:162425 "Emericella nidulans"
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
"chromatin silencing at telomere" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:1900376
"regulation of secondary metabolite biosynthetic process"
evidence=IMP] [GO:1900197 "negative regulation of penicillin
biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
metabolic process" evidence=IMP] [GO:0010913 "regulation of
sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
"rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0071585 "detoxification of cadmium ion" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
"chromatin silencing at centromere" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0031060 "regulation of histone
methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
Length = 766
Score = 293 (108.2 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 103/360 (28%), Positives = 162/360 (45%)
Query: 45 EEPTE--GASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR 102
EE E G L S P G V Y + HP P RI + + GL
Sbjct: 110 EESKEAPGLPLASLPSGLCYDVQMRYHCEVRPT--SDVHPEDPRRIYYIYKELCRAGLVD 167
Query: 103 RMEVNRPFPAGPSDIRRFH----TDEYVEFLASVSP----ESSGDPSFSRHLKRFNVGED 154
+E RP A P ++R H T+E + + + + ES+ D S L D
Sbjct: 168 DIESTRPLVARP--LKRIHARNATEEEISLVHTAAHYAFVESTKDMS-DEELIALEHTRD 224
Query: 155 CPVFDGL-FGFCQASAGGSIGA--AVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDI 211
F+ L F S GG+I AV + IAV G HHA+ + GFC N++
Sbjct: 225 SIYFNNLTFASSLLSVGGAIETCLAVATRKVKNAIAVIRPPG-HHAEHDKTMGFCLFNNV 283
Query: 212 VLGIL---ELLKVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGT-- 263
+ + L + R+++ +D DVHHG+G+++AFY V+ +S H + G F+PG
Sbjct: 284 SVAARVCQQRLGLSCRKIMILDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKD 343
Query: 264 GHIKDVGAGQGKFYALNVPL-NDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLS 322
G GAG G+ +N+P + G+ D + F ++ + + + PD V++ G D+ +
Sbjct: 344 GDADFCGAGAGEGKNVNIPWPSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAA 403
Query: 323 GDRLG-CFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPD 380
GD LG CF ++ +A L + + V GGY R++++ T +G PD
Sbjct: 404 GDTLGGCF-VTPACYAHMTHMLMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPD 462
>TAIR|locus:2159461 [details] [associations]
symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
"histone acetyltransferase activity" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
epidermal cell differentiation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
Uniprot:Q8LRK8
Length = 682
Score = 285 (105.4 bits), Expect = 3.0e-22, P = 3.0e-22
Identities = 93/332 (28%), Positives = 156/332 (46%)
Query: 49 EGASLVSGPDGKKRRVSYFYEPTI--GDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEV 106
EG V+G +R+V Y+ T+ D G+ P RIR+ + G+ +R V
Sbjct: 47 EGDGKVAGKS--QRKVGLVYDETMCKHDTPNGKVDVECPDRIRVIWEKLQLAGVTQRCVV 104
Query: 107 NRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQ 166
A ++ HT ++V + S+S + SR K + + + G
Sbjct: 105 LGGSKAEDKHLKLVHTKKHVNLVKSISTKKKD----SRRNKIASQLDSIYLNGGSSEAAY 160
Query: 167 ASAGGSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH-- 222
+AG + A K+ G+ D A+ G HHA+ EA GFC N++ + LL
Sbjct: 161 LAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLNERPD 219
Query: 223 ---RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFP-GT-GHIKDVGAGQGK 275
+++L VD D+HHG+G ++ F+ RV+ S H+ G F+P G G VG G G+
Sbjct: 220 LDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGEGPGE 279
Query: 276 FYALNVPLNDG-LDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVK 334
+ +NVP G D + ++ I+ V + ++PD ++L G D+ GD LG ++
Sbjct: 280 GFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPY 339
Query: 335 GHADCLRFLRSFNVPLMVLG-GGGYTIRNVAR 365
G++ L+ L F +VL GGY + ++ +
Sbjct: 340 GYSVMLKKLMEFAHGKIVLALEGGYNLESLGK 371
>TIGR_CMR|SPO_A0096 [details] [associations]
symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
Length = 344
Score = 261 (96.9 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 73/252 (28%), Positives = 119/252 (47%)
Query: 80 GHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
GH P R +L+ GL ++ V P +D+ R H++ Y++ ++S G
Sbjct: 14 GHAESPESKRRFKSLMDVSGLTAQLSVQSAEPVTETDMARVHSEAYLDRFKTLSDAGGG- 72
Query: 140 PSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDAD--IAVNWAGGLHHA 197
N GE P G + SAG A + G D A++ G HHA
Sbjct: 73 ----------NAGEFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPG-HHA 121
Query: 198 KKSEASGFCYVNDIVLGILELLKVHR---RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH 254
+ + GFC + +I + I E + R RV +D DVHHG+G ++ FY + V+T+S H
Sbjct: 122 MRDGSMGFCLLANIAIAI-EAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIH 180
Query: 255 KFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVL 314
+ F PG+G + GAG G+ LNV L G +S+ ++ + ++P+ +++
Sbjct: 181 QENCFPPGSGSGSERGAGAGEGANLNVNLLPGAGHQSYIDAMDILVLPALHAFRPELIIV 240
Query: 315 QCGADSLSGDRL 326
CG D+ + D L
Sbjct: 241 ACGLDANNFDPL 252
>RGD|619979 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
"core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA;ISO] [GO:0010882
"regulation of cardiac muscle contraction by calcium ion signaling"
evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
"histone deacetylation" evidence=ISO;IMP] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
"potassium ion binding" evidence=IEA;ISO] [GO:0031594
"neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0033613
"activating transcription factor binding" evidence=IEA;ISO]
[GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
[GO:0042493 "response to drug" evidence=IDA] [GO:0042641
"actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043393 "regulation of protein binding"
evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
of skeletal muscle fiber development" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
[GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
[GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
"histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
Genevestigator:Q99P99 Uniprot:Q99P99
Length = 1077
Score = 283 (104.7 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 102/359 (28%), Positives = 161/359 (44%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSP--ESSG 138
HP RI+ + + GL + E R A +++ H++ + L +P
Sbjct: 673 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHT-LLYGTNPLNRQKL 731
Query: 139 DPSFSRHLKRF---NVGEDCP-VFDGLF--GFCQASAGGSIGAAVKLNRGDAD--IAVNW 190
D S + R VG D +++ + G + + G + K+ G+ AV
Sbjct: 732 DSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVR 791
Query: 191 AGGLHHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDR 247
G HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY
Sbjct: 792 PPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSK-ILIVDWDVHHGNGTQQAFYNDPN 849
Query: 248 VMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQ 301
V+ +S H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++
Sbjct: 850 VLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVM 909
Query: 302 KVMEVYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGY 358
+ + PD V++ G D++ G LG +NLS K + L +VL GG+
Sbjct: 910 PIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGH 969
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
+ A C E V+ L NE P+ LH P N NA MEK+
Sbjct: 970 DL--TAICDASEACVSA-------LLGNELEPL--PEKVLHQRP----NANAVHSMEKV 1013
>UNIPROTKB|Q9UKV0 [details] [associations]
symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
"B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
response" evidence=TAS] [GO:0042113 "B cell activation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0048742
"regulation of skeletal muscle fiber development" evidence=ISS]
[GO:0051153 "regulation of striated muscle cell differentiation"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA;IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
"histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
"positive regulation of cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
Ensembl:ENST00000405010 Ensembl:ENST00000406451
Ensembl:ENST00000417496 Ensembl:ENST00000432645
Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
GermOnline:ENSG00000048052 Uniprot:Q9UKV0
Length = 1011
Score = 282 (104.3 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 90/271 (33%), Positives = 134/271 (49%)
Query: 163 GFCQASAGGSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLG---ILE 217
G + + G I A K+ G+ AV G HHA++S A GFC+ N + + + +
Sbjct: 749 GAARMAVGCVIELASKVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRD 807
Query: 218 LLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGK 275
L + + +L VD+DVHHG+G ++AFY ++ +S H++ G+FFPG+G +VG G G+
Sbjct: 808 QLNISK-ILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGE 866
Query: 276 FYALNVPLNDGLD----DESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDR--LGCF 329
Y +N+ GLD D + FR I++ V + + PD V++ G D+L G LG +
Sbjct: 867 GYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHTPPLGGY 926
Query: 330 NLSVK--GH-ADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN 386
++ K GH L L V L + GG T A C E V N L N
Sbjct: 927 KVTAKCFGHLTKQLMTLADGRVVLALEGGHDLT----AICDASEACV-------NALLGN 975
Query: 387 EYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
E E D LH P N+NA ++KI
Sbjct: 976 EL-EPLAEDI-LHQSP----NMNAVISLQKI 1000
>RGD|1310748 [details] [associations]
symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=ISO] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
striated muscle cell differentiation" evidence=ISO] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
cell migration involved in sprouting angiogenesis" evidence=ISO]
Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
Length = 484
Score = 274 (101.5 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 96/332 (28%), Positives = 156/332 (46%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLAS-------VS 133
HP RI+ + + GL + E + A +I+ H++ + + +
Sbjct: 82 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTSPLDGQKLD 141
Query: 134 PESS-GDPS--FSRHLKRFNVGEDCP-VFDGLF--GFCQASAGGSIGAAVKLNRGDAD-- 185
P + GD S F L +G D +++ L G + + G I A K+ G+
Sbjct: 142 PRTLLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASKVASGELKNG 201
Query: 186 IAVNWAGGLHHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAF 242
AV G HHA++S A GFC+ N + + + + L + + +L VD+DVHHG+G ++AF
Sbjct: 202 FAVVRPPG-HHAEESAAMGFCFFNSVAITAKYLRDQLNISK-ILIVDLDVHHGNGTQQAF 259
Query: 243 YTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLF 296
Y ++ +S H++ G+FFPG+G +VG G G+ Y +N+ GLD D + F
Sbjct: 260 YADPSILYISLHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAF 319
Query: 297 RPIIQKVMEVYQPDAVVLQCGADSLSGDR--LGCFNLSVK----GH-ADCLRFLRSFNVP 349
R ++ V + PD V++ G D+L G LG + ++ K GH L L + V
Sbjct: 320 RTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCNGFGHLTKQLMTLANGRVA 379
Query: 350 LMVLGGGGYTIRNVARCWCYETAV--AVGVEP 379
L + GG T A C E + +G EP
Sbjct: 380 LALEGGHDLT----AICDASEACINALLGNEP 407
>UNIPROTKB|Q5LQF5 [details] [associations]
symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 265 (98.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 82/256 (32%), Positives = 113/256 (44%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
H P R NL+ GL + RP A IR H +++ LASV GD
Sbjct: 43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGD- 101
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIA-VNWAGGLHHAKK 199
GE P + + GG I A + G A+ A V HHA
Sbjct: 102 ----------AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALP 151
Query: 200 SEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG 257
A GFC + + LGI + K + R+ VD DVHHG+G E F V+T+S H+
Sbjct: 152 DLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-D 210
Query: 258 DFFP-GTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQC 316
+ FP +G I GAG +NVPL G ++R F I+ ++ + P+ +VL C
Sbjct: 211 NLFPLDSGGIGVKGAGNSN---INVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPC 267
Query: 317 GADSLSGDRLGCFNLS 332
G D+ + D LG LS
Sbjct: 268 GYDASAVDPLGVCMLS 283
>TIGR_CMR|SPO_2535 [details] [associations]
symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
Length = 371
Score = 265 (98.3 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 82/256 (32%), Positives = 113/256 (44%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
H P R NL+ GL + RP A IR H +++ LASV GD
Sbjct: 43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVCERGGGD- 101
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIA-VNWAGGLHHAKK 199
GE P + + GG I A + G A+ A V HHA
Sbjct: 102 ----------AGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALP 151
Query: 200 SEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG 257
A GFC + + LGI + K + R+ VD DVHHG+G E F V+T+S H+
Sbjct: 152 DLAMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ-D 210
Query: 258 DFFP-GTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQC 316
+ FP +G I GAG +NVPL G ++R F I+ ++ + P+ +VL C
Sbjct: 211 NLFPLDSGGIGVKGAGNSN---INVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPC 267
Query: 317 GADSLSGDRLGCFNLS 332
G D+ + D LG LS
Sbjct: 268 GYDASAVDPLGVCMLS 283
>FB|FBgn0026428 [details] [associations]
symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
[GO:0022904 "respiratory electron transport chain" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
Uniprot:Q8IR37
Length = 1138
Score = 280 (103.6 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 83/304 (27%), Positives = 145/304 (47%)
Query: 80 GHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
GHP +P RI+ H + YGL ++M+ P A ++ HT +V + + +
Sbjct: 562 GHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE 621
Query: 140 PSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAV-KLNRGDADIAV-NWAGGLHHA 197
+ + +V FD C A G + AV + RG++ + N HHA
Sbjct: 622 LHDAAGIYN-SVYLHPRTFD-----CATLAAGLVLQAVDSVLRGESRSGICNVRPPGHHA 675
Query: 198 KKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHK 255
++ GFC N++ + ++ RVL VD DVHHG+G + F + +V+ +S H+
Sbjct: 676 EQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHR 735
Query: 256 F--GDFFP-GT-GHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPD 310
+ G FFP G G+ VG G G+ + +N+P N G+ D + F+ +I + + P
Sbjct: 736 YEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQ 795
Query: 311 AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNV--ARCW 367
V++ G D+ GD LG ++ +G+ +L + + ++V GGY + ++ A
Sbjct: 796 LVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYAMTM 855
Query: 368 CYET 371
C +T
Sbjct: 856 CTKT 859
Score = 275 (101.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 79/264 (29%), Positives = 129/264 (48%)
Query: 112 AGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGG 171
A +I R HT+E+ E L E+SG R + + + + F ++G
Sbjct: 166 ATKDEILRLHTEEHFERLK----ETSGIRDDERMEELSSRYDSIYIHPSTFELSLLASGS 221
Query: 172 SIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLY 227
+I L G A +A+ G HHA K+E +G+C+ N++ L L VH+ R+L
Sbjct: 222 TIELVDHLVAGKAQNGMAIIRPPG-HHAMKAEYNGYCFFNNVALATQHALDVHKLQRILI 280
Query: 228 VDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIKD---VGAGQGKFYALNVP 282
+D DVHHG G + FY RV+ S H+F G F+P H D +G+G G Y NVP
Sbjct: 281 IDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHL-HESDYHAIGSGAGTGYNFNVP 339
Query: 283 LN-DGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLR 341
LN G+ + + +F+ ++ V +QP+ +++ G D+ G G ++ + L
Sbjct: 340 LNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLN 399
Query: 342 -FLRSFNVPLMVLGGGGYTIRNVA 364
LR + + V+ GGY + ++A
Sbjct: 400 PLLRLADARVAVVLEGGYCLDSLA 423
>MGI|MGI:3036234 [details] [associations]
symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
promoter binding" evidence=ISO] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IGI] [GO:0004407
"histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
[GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP;IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
[GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0034983
"peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
[GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
"protein complex" evidence=ISO] [GO:0043393 "regulation of protein
binding" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045820 "negative regulation of
glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0070491 "repressing
transcription factor binding" evidence=ISO] [GO:0070555 "response
to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
deacetylation" evidence=IEA;ISO] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
Uniprot:Q6NZM9
Length = 1076
Score = 279 (103.3 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 101/359 (28%), Positives = 161/359 (44%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSP--ESSG 138
HP RI+ + + GL + E R A +++ H++ + L +P
Sbjct: 672 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHT-LLYGTNPLNRQKL 730
Query: 139 DPSFSRHLKRF---NVGEDCP-VFDGLF--GFCQASAGGSIGAAVKLNRGDAD--IAVNW 190
D S + R VG D +++ + G + + G + K+ G+ AV
Sbjct: 731 DSSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVR 790
Query: 191 AGGLHHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDR 247
G HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY
Sbjct: 791 PPG-HHAEESTPMGFCYFNSVAVAAKLLQQRLNVSK-ILIVDWDVHHGNGTQQAFYNDPN 848
Query: 248 VMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQ 301
V+ +S H++ G+FFPG+G +VG G G + +N+ GL+ D + FR ++
Sbjct: 849 VLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVM 908
Query: 302 KVMEVYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGY 358
+ + PD V++ G D++ G LG +NLS K + L +VL GG+
Sbjct: 909 PIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRLVLALEGGH 968
Query: 359 TIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
+ A C E V+ L NE P+ LH P N NA MEK+
Sbjct: 969 DL--TAICDASEACVSA-------LLGNELEPL--PEKVLHQRP----NANAVHSMEKV 1012
>UNIPROTKB|F6X8E7 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
Uniprot:F6X8E7
Length = 1068
Score = 278 (102.9 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 89/271 (32%), Positives = 134/271 (49%)
Query: 163 GFCQASAGGSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLG---ILE 217
G + + G I A K+ G+ AV G HHA++S A GFC+ N + + + +
Sbjct: 751 GAARMAVGCVIELASKVASGELKNGFAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRD 809
Query: 218 LLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGK 275
L + + +L VD+DVHHG+G ++AFY ++ +S H++ G+FFPG+G +VG G G+
Sbjct: 810 QLNISK-ILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGE 868
Query: 276 FYALNVPLNDGLD----DESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDR--LGCF 329
Y +N+ GLD D + FR ++ V + + PD V++ G D+L G LG +
Sbjct: 869 GYNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGY 928
Query: 330 NLSVK--GH-ADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYN 386
++ K GH L L +V L + GG T A C E V N L N
Sbjct: 929 KVTAKCFGHLTKQLMTLADGHVVLALEGGHDLT----AICDASEACV-------NALLGN 977
Query: 387 EYYEYFGPDYTLHVEPCNMENLNAHKDMEKI 417
E E D LH P N+NA ++KI
Sbjct: 978 EL-EPLAEDI-LHQTP----NMNAVISLQKI 1002
>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
symbol:hdac6 "histone deacetylase 6" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
"angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
Length = 1081
Score = 276 (102.2 bits), Expect = 7.4e-21, P = 7.4e-21
Identities = 67/223 (30%), Positives = 112/223 (50%)
Query: 168 SAGGSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR-- 223
+AG +A + G +A+ G HHA+K A GFC+ N L + R
Sbjct: 545 AAGSCFNSAQAILTGQVRNAVAIVRPPG-HHAEKDTACGFCFFNTAALTARYAQSITRES 603
Query: 224 -RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD--FFPGT--GHIKDVGAGQGKFYA 278
RVL VD DVHHG+G + F D V+ +S H++ D FFP + + VG G+G+ Y
Sbjct: 604 LRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYN 663
Query: 279 LNVPLNDG-LDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHA 337
+N+P N G + D + F ++ + + P+ V++ G D+ GD LG F ++ +G+A
Sbjct: 664 VNIPWNGGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYA 723
Query: 338 DCLRFLRSFNVP-LMVLGGGGYTIRNVARCWCYETAVAVGVEP 379
L S ++++ GGY + +++ T++ +G P
Sbjct: 724 HLTHQLMSLAAGRVLIILEGGYNLTSISESMSMCTSMLLGDSP 766
Score = 258 (95.9 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 83/317 (26%), Positives = 140/317 (44%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
HP P R+ ++ GL R ++ HT EYVE + S ++ +
Sbjct: 82 HPECPARVSTVMEMLETEGLLGRCVQVEARAVTEDELLLVHTKEYVELMKST--QNMTEE 139
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDA--DIAVNWAGGLHHAK 198
+++ + + G F S G + K+ ++N G HHA+
Sbjct: 140 ELKTLAEKY---DSVYLHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRPPG-HHAQ 195
Query: 199 KSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF 256
+ +GFC N++ + K HR RVL VD DVHHG G++ F V+ S H++
Sbjct: 196 ADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRY 255
Query: 257 --GDFFPGTGHIKD-----VGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQ 308
G F+P H+K+ VG+G G+ Y +N+P N G++ + F+ ++ V +Q
Sbjct: 256 EDGSFWP---HLKESDSSSVGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPVAYEFQ 312
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVARCW 367
P V++ G D++ GD G +S + + L+ +VL GGY +++ A
Sbjct: 313 PQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKGVAQGRLVLALEGGYNLQSTAEGV 372
Query: 368 CYETAVAVGVEPDNKLP 384
C +G +P LP
Sbjct: 373 CASMRSLLG-DPCPHLP 388
>UNIPROTKB|I3LM52 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
Uniprot:I3LM52
Length = 1052
Score = 275 (101.9 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 72/207 (34%), Positives = 109/207 (52%)
Query: 163 GFCQASAGGSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELL- 219
G + + G + A K+ G+ AV G HHA++S GFCY N + + +LL
Sbjct: 737 GAARLAVGCVVELAFKVATGELKNGFAVVRPPG-HHAEESTPMGFCYFNSVAIAA-KLLQ 794
Query: 220 -KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGK 275
++H + L VD DVHHG+G ++AFY+ V+ VS H++ G+FFPG+G +VG G G
Sbjct: 795 QRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGV 854
Query: 276 FYALNVPLNDGLD----DESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDR--LGCF 329
+ +N+ GLD D + FR ++ + + PD V++ G D++ G LG +
Sbjct: 855 GFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGY 914
Query: 330 NLSVKGHADCLRFLRSFNVPLMVLGGG 356
NLS K C +L LM L GG
Sbjct: 915 NLSAK----CFGYLTK---QLMGLAGG 934
>UNIPROTKB|F1LQG9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
Uniprot:F1LQG9
Length = 826
Score = 273 (101.2 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 96/348 (27%), Positives = 162/348 (46%)
Query: 55 SGPD-GKK-RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPA 112
SGPD G S Y+ D Q P++ ++ ++ + H L R + PA
Sbjct: 395 SGPDEGADLEESSAGYKKLFADAQ--QLQPLQVYQAPLSLATVPHQALGR----TQSSPA 448
Query: 113 GPSDIRRFHTDE--YVEFLASVSPESSGDPSFSRHLKRFNVGEDCP-VFDGLFGFC--QA 167
P ++ TD V+ L + ++ P L +G D V++ + +
Sbjct: 449 APGSMKS-PTDHPTVVKHLFTTGKPNTAHPIMYAMLPCGGIGVDSDTVWNEMHSSSAVRM 507
Query: 168 SAGGSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLG---ILELLKVH 222
+ G + A K+ G+ A+ G HHA++S A GFC+ N + + + + L V
Sbjct: 508 AVGCLVELAFKVAAGELKNGFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQKLSVG 566
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALN 280
+ VL VD D+HHG+G ++AFY V+ +S H++ G+FFPG+G ++VG G G Y +N
Sbjct: 567 K-VLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVN 625
Query: 281 VPLNDGLD----DESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSG--DRLGCFNLSVK 334
V G+D D + FR ++ + + PD V++ G D++ G LG ++++ +
Sbjct: 626 VAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTAR 685
Query: 335 --GHADC-LRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEP 379
GH L L V L + GG T A C ++V ++P
Sbjct: 686 CFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQP 733
>ZFIN|ZDB-GENE-061013-95 [details] [associations]
symbol:hdac4 "histone deacetylase 4" species:7955
"Danio rerio" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
"regulation of neural crest formation" evidence=IMP] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IMP]
[GO:0001755 "neural crest cell migration" evidence=IMP]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
GO:GO:0090299 Uniprot:Q2VC82
Length = 1023
Score = 274 (101.5 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 86/297 (28%), Positives = 142/297 (47%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSP-----E 135
HP RI+ + + GL + E R A +++ H++ +V L +P +
Sbjct: 620 HPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQTVHSEAHV-LLYGTNPLRQKLD 678
Query: 136 SSGDPSFSRHLKRFNVGEDCP-VFDGLFGFCQA--SAGGSIGAAVKLNRGDA--DIAVNW 190
SS P F R L +G D +++ + A + G + K+ G+ AV
Sbjct: 679 SSVTPMFVR-LPCGGIGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVR 737
Query: 191 AGGLHHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDR 247
G HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY+
Sbjct: 738 PPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSK-ILIVDWDVHHGNGTQQAFYSDPN 795
Query: 248 VMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQ 301
V+ +S H++ G+FFPG+G +VG G G + +N+ GL+ D + F ++
Sbjct: 796 VLYLSLHRYDDGNFFPGSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGDADYLAAFTSVVM 855
Query: 302 KVMEVYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ + PD V++ G D++ G LG + L+ K C +L LM L GG
Sbjct: 856 PIANEFSPDVVLVSSGFDAVEGHPPPLGGYKLTAK----CFGYLTK---QLMGLAGG 905
>UNIPROTKB|F1MYR0 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
"response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045820 "negative regulation of glycolysis" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043393 "regulation of protein binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030955 "potassium ion binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0014894 "response to denervation involved in regulation of
muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
muscle contraction by calcium ion signaling" evidence=IEA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
Uniprot:F1MYR0
Length = 1084
Score = 273 (101.2 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 63/173 (36%), Positives = 95/173 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S GFCY N + + + + L V + L VD DVHHG+G ++AFY+ RV+ +
Sbjct: 802 HHAEESTPMGFCYFNSVAIAAKLLQQRLSVSK-TLVVDWDVHHGNGTQQAFYSDPRVLYI 860
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++ +
Sbjct: 861 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920
Query: 306 VYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ PD V++ G D++ G LG +NLS K C +L LM L GG
Sbjct: 921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAK----CFGYLTK---QLMGLAGG 966
>UNIPROTKB|F1S1J4 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
Length = 662
Score = 265 (98.3 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 66/199 (33%), Positives = 108/199 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL--KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + +LL K++ +VL VD D+HHG+G ++AFY V+ +
Sbjct: 372 HHAEESTAMGFCFFNSVAI-TTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 430
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 431 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 490
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 491 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 550
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 551 ICDASEACVSALLSVELQP 569
>UNIPROTKB|F5GX36 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
denervation involved in regulation of muscle adaptation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042641
"actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
Length = 668
Score = 264 (98.0 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 61/173 (35%), Positives = 95/173 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY+ V+ +
Sbjct: 386 HHAEESTPMGFCYFNSVAVAAKLLQQRLSVSK-ILIVDWDVHHGNGTQQAFYSDPSVLYM 444
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++ +
Sbjct: 445 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 504
Query: 306 VYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ PD V++ G D++ G LG +NLS + C +L LM L GG
Sbjct: 505 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAR----CFGYLTK---QLMGLAGG 550
>UNIPROTKB|F1PRU6 [details] [associations]
symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
Length = 1084
Score = 266 (98.7 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 62/173 (35%), Positives = 93/173 (53%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH---RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S GFCY N + + +LL+ + L VD DVHHG+G ++AFY V+ +
Sbjct: 801 HHAEESTPMGFCYFNSVAIAA-KLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYI 859
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++ +
Sbjct: 860 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 919
Query: 306 VYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ PD V++ G D++ G LG +NLS K C +L LM L GG
Sbjct: 920 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAK----CFGYLTK---QLMGLAGG 965
>MGI|MGI:1333784 [details] [associations]
symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0001085 "RNA
polymerase II transcription factor binding" evidence=IPI]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
"histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
"heart development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
differentiation" evidence=IDA] [GO:0010832 "negative regulation of
myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016575 "histone deacetylation"
evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
"response to drug" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043393 "regulation of protein binding"
evidence=ISO] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IMP] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=TAS] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
fiber development" evidence=IGI] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051153 "regulation of striated muscle cell
differentiation" evidence=IGI] [GO:0061333 "renal tubule
morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=ISO] [GO:0071498 "cellular response to
fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
of cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:2000179 "positive regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=IMP] InterPro:IPR017320
PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
Length = 1113
Score = 266 (98.7 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 65/199 (32%), Positives = 107/199 (53%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + + + L V + VL VD D+HHG+G ++AFY V+ +
Sbjct: 823 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGK-VLIVDWDIHHGNGTQQAFYNDPSVLYI 881
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ + +
Sbjct: 882 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQ 941
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 942 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 1001
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 1002 ICDASEACVSALLSVELQP 1020
>UNIPROTKB|F1N616 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
protein binding" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032703
"negative regulation of interleukin-2 production" evidence=IEA]
[GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
Length = 988
Score = 265 (98.3 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 64/191 (33%), Positives = 100/191 (52%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ FY V+ +S
Sbjct: 705 HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTFYQDPNVLYIS 764
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H+ G+FFPG+G + +VGAG G+ + +NV GLD D + FR ++ +
Sbjct: 765 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 824
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNV 363
+ PD V++ G D+ G LG +++S K + L S +VL GG+ +
Sbjct: 825 FSPDLVLVSAGFDAAEGHPPPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDL--T 882
Query: 364 ARCWCYETAVA 374
A C E VA
Sbjct: 883 AICDASEACVA 893
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 54/196 (27%), Positives = 89/196 (45%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPES---- 136
HP RI+ + ++ GL + E R A +++ H++ +V L +P S
Sbjct: 577 HPEHAGRIQSIWSRLLERGLRSQCESLRGRKASLEELQSVHSERHV-LLYGTNPLSRLKL 635
Query: 137 -SGDPSFSRHLKRF------NVGEDCP-VFDGLFGFCQAS-AGGSI-GAAVKLNRGDAD- 185
+G + + F VG D +++ L A A GS+ A K+ +
Sbjct: 636 DNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKN 695
Query: 186 -IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAF 242
AV G HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ F
Sbjct: 696 GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTF 754
Query: 243 YTTDRVMTVSFHKFGD 258
Y V+ +S H+ D
Sbjct: 755 YQDPNVLYISLHRHDD 770
>UNIPROTKB|F1NWX8 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
of cardiac muscle contraction by calcium ion signaling"
evidence=IEA] [GO:0014894 "response to denervation involved in
regulation of muscle adaptation" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
"regulation of protein binding" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
Length = 1071
Score = 270 (100.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 87/299 (29%), Positives = 140/299 (46%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
HP RI+ + + GL + E R A +++ H++ + L +P +
Sbjct: 665 HPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHT-LLYGTNPLNRQKL 723
Query: 141 SFSR-----HLKRFN--VGEDCP-VFDGLF--GFCQASAGGSIGAAVKLNRGDAD--IAV 188
+ HL VG D +++ + G + + G I K+ G+ AV
Sbjct: 724 DSKKLLGIVHLSFVGTAVGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAV 783
Query: 189 NWAGGLHHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTT 245
G HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY
Sbjct: 784 VRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSK-ILIVDWDVHHGNGTQQAFYND 841
Query: 246 DRVMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPI 299
V+ +S H++ G+FFPG+G +VG G G + +N+ GLD D + FR +
Sbjct: 842 PNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTV 901
Query: 300 IQKVMEVYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ + + PD V++ G D++ G LG +NLS K C +L LM L GG
Sbjct: 902 VMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAK----CFGYLTK---QLMGLAGG 953
Score = 40 (19.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 357 GYTIRNVARCWCYE----TAVA---VGVEPDNKLPYNEYYE 390
GY++ +C E TA+A VGV+P K P +E E
Sbjct: 1026 GYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPDDEPME 1066
>UNIPROTKB|Q9UQL6 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0002076 "osteoblast development"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0010830 "regulation of myotube differentiation" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
protein binding" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
Ensembl:ENST00000225983 Ensembl:ENST00000336057
Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
GO:GO:0090051 Uniprot:Q9UQL6
Length = 1122
Score = 265 (98.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 66/199 (33%), Positives = 108/199 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL--KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + +LL K++ +VL VD D+HHG+G ++AFY V+ +
Sbjct: 832 HHAEESTAMGFCFFNSVAI-TAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 890
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 891 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 950
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 951 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 1010
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 1011 ICDASEACVSALLSVELQP 1029
>UNIPROTKB|F1MNA5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090051 "negative regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
transcription factor binding" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
Uniprot:F1MNA5
Length = 1125
Score = 265 (98.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 66/199 (33%), Positives = 108/199 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL--KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + +LL K++ +VL VD D+HHG+G ++AFY V+ +
Sbjct: 835 HHAEESTAMGFCFFNSVAI-TTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 893
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 894 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 953
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 954 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 1013
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 1014 ICDASEACVSALLSVELQP 1032
>UNIPROTKB|I3LEZ7 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
Length = 1130
Score = 265 (98.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 85/330 (25%), Positives = 142/330 (43%)
Query: 63 RVSYFYEPTIGDYY--YGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
R Y+ + D+Y + HP P RI + GL R PA +++
Sbjct: 489 RTGLVYDQQMMDHYNLWDSHHPEMPQRILRIMRRLEELGLAGRCLALPARPATDAELLAC 548
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLN 180
H+ EYV + + E R ++ CP G F Q +AG + +
Sbjct: 549 HSAEYVSRIRAT--EKMRTRELHREGANYDSIYICP---GTFACAQLAAGAACRLVEAVL 603
Query: 181 RGDA--DIAVNWAGGLHHAKKSEASGFCYVNDIVLGI--LELLKVHR-RVLYVDIDVHHG 235
G+ IAV G HHA++ A GFC+ N + + + + H R+L VD DVHHG
Sbjct: 604 AGEVLNGIAVVRPPG-HHAERDSACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHG 662
Query: 236 DGVEEAFYTTDRVMTVSFHKF--GDFFP-GT-GHIKDVGAGQGKFYALNVPLNDG-LDDE 290
+G + F V+ +S H++ G FFP G G +G G + +NV N + D
Sbjct: 663 NGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGPRVGDP 722
Query: 291 SFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVP 349
+ + ++ + + P+ V++ G D+ GD LG +S + +A L N
Sbjct: 723 EYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLLMGLANGR 782
Query: 350 LMVLGGGGYTIRNVARCWCYETAVAVGVEP 379
++++ GGY + +++ T +G P
Sbjct: 783 IILILEGGYNLISISESMAACTRSLLGDSP 812
Score = 227 (85.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 82/296 (27%), Positives = 129/296 (43%)
Query: 82 PMKPHRIRMAHNLIVHYGL-HRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
P P R+ ++ GL R + F A ++ H+ EY++ + + + G+
Sbjct: 116 PEGPERLHAIKEQLMQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGE- 173
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADI----AVNWAGGLHH 196
R L + + + + C A GS+ V G A+I A+ G HH
Sbjct: 174 --LRVLA--DTYDSVYLHPNSYT-CACLASGSVLRLVDAVLG-AEIRNGMAIIRPPG-HH 226
Query: 197 AKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH 254
A+ S G+C N + L + H +RVL VD DVHHG G + F V+ S H
Sbjct: 227 AQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIH 286
Query: 255 KF--GDFFPG--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQP 309
++ G F+P + G GQG+ Y +NVP N G+ D + F ++ V +QP
Sbjct: 287 RYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQP 346
Query: 310 DAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVA 364
V++ G D+L GD G + G A L ++L GGY +R++A
Sbjct: 347 QLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLA 402
>UNIPROTKB|F1NP26 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
Uniprot:F1NP26
Length = 1062
Score = 269 (99.8 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 75/232 (32%), Positives = 118/232 (50%)
Query: 142 FSRH--LKRFNVGEDCPVFDGLF--GFCQASAGGSIGAAVKLNRGDAD--IAVNWAGGLH 195
+S+H L NV + +++ + G + + G I K+ G+ AV G H
Sbjct: 722 YSQHDCLGGVNVVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPG-H 780
Query: 196 HAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY V+ +S
Sbjct: 781 HAEESTPMGFCYFNSVAIAAKLLQQRLNVSK-ILIVDWDVHHGNGTQQAFYNDPNVLYIS 839
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++ +
Sbjct: 840 LHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANE 899
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ PD V++ G D++ G LG +NLS K C +L LM L GG
Sbjct: 900 FAPDVVLVSSGFDAVEGHPTPLGGYNLSAK----CFGYLTK---QLMGLAGG 944
Score = 40 (19.1 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 357 GYTIRNVARCWCYE----TAVA---VGVEPDNKLPYNEYYE 390
GY++ +C E TA+A VGV+P K P +E E
Sbjct: 1017 GYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPDDEPME 1057
>UNIPROTKB|F1LM64 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
regulation of myotube differentiation" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
evidence=IEA] [GO:0043393 "regulation of protein binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0070491 "repressing transcription factor binding" evidence=IEA]
[GO:0090051 "negative regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
Length = 908
Score = 263 (97.6 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 65/199 (32%), Positives = 106/199 (53%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + + + L V + VL VD D+HHG+G ++AFY V+ +
Sbjct: 618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGK-VLIVDWDIHHGNGTQQAFYDDPSVLYI 676
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 677 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 736
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 737 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 796
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 797 ICDASEACVSALLSVELQP 815
>UNIPROTKB|F1LSL9 [details] [associations]
symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
Uniprot:F1LSL9
Length = 908
Score = 263 (97.6 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 65/199 (32%), Positives = 106/199 (53%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + + + L V + VL VD D+HHG+G ++AFY V+ +
Sbjct: 618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGK-VLIVDWDIHHGNGTQQAFYDDPSVLYI 676
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 677 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 736
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 737 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 796
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 797 ICDASEACVSALLSVELQP 815
>UNIPROTKB|P56524 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0030183 "B cell
differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
evidence=TAS] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0010832 "negative regulation of myotube differentiation"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
"regulation of protein binding" evidence=IMP] [GO:0030955
"potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
"response to denervation involved in regulation of muscle
adaptation" evidence=ISS] [GO:0045820 "negative regulation of
glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0070491 "repressing transcription
factor binding" evidence=IPI] [GO:0070932 "histone H3
deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0033613 "activating transcription
factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
GO:GO:0010882 Uniprot:P56524
Length = 1084
Score = 264 (98.0 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 61/173 (35%), Positives = 95/173 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY+ V+ +
Sbjct: 802 HHAEESTPMGFCYFNSVAVAAKLLQQRLSVSK-ILIVDWDVHHGNGTQQAFYSDPSVLYM 860
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++ +
Sbjct: 861 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920
Query: 306 VYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ PD V++ G D++ G LG +NLS + C +L LM L GG
Sbjct: 921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAR----CFGYLTK---QLMGLAGG 966
>UNIPROTKB|J9P9N5 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
Uniprot:J9P9N5
Length = 1090
Score = 264 (98.0 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 66/199 (33%), Positives = 108/199 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL--KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + +LL K++ +VL VD D+HHG+G ++AFY V+ +
Sbjct: 800 HHAEESTAMGFCFFNSVAI-TTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 858
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 859 SLHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 918
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 919 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 978
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 979 ICDASEACVSALLSVELQP 997
>UNIPROTKB|F1P6I3 [details] [associations]
symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
Length = 1117
Score = 264 (98.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 66/199 (33%), Positives = 108/199 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL--KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + +LL K++ +VL VD D+HHG+G ++AFY V+ +
Sbjct: 827 HHAEESTAMGFCFFNSVAI-TTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 885
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 886 SLHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 945
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 946 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 1005
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 1006 ICDASEACVSALLSVELQP 1024
>UNIPROTKB|Q8WUI4 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
specific)" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
"activating transcription factor binding" evidence=IPI] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
Pathway_Interaction_DB:ar_tf_pathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
Ensembl:ENST00000354334 Ensembl:ENST00000427332
Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
Length = 952
Score = 263 (97.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 59/176 (33%), Positives = 94/176 (53%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ FY V+ +S
Sbjct: 669 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 728
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H+ G+FFPG+G + +VGAG G+ + +NV GLD D + FR ++ +
Sbjct: 729 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 788
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D+ G LG +++S K C ++ LM L GG +
Sbjct: 789 FSPDLVLVSAGFDAAEGHPAPLGGYHVSAK----CFGYMTQ---QLMNLAGGAVVL 837
>UNIPROTKB|F1NES1 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
Uniprot:F1NES1
Length = 1054
Score = 268 (99.4 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 62/173 (35%), Positives = 94/173 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY V+ +
Sbjct: 772 HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSK-ILIVDWDVHHGNGTQQAFYNDPNVLYI 830
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++ +
Sbjct: 831 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 890
Query: 306 VYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ PD V++ G D++ G LG +NLS K C +L LM L GG
Sbjct: 891 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAK----CFGYLTK---QLMGLAGG 936
Score = 40 (19.1 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 357 GYTIRNVARCWCYE----TAVA---VGVEPDNKLPYNEYYE 390
GY++ +C E TA+A VGV+P K P +E E
Sbjct: 1009 GYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPDDEPME 1049
>UNIPROTKB|J3KPH8 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
Length = 1014
Score = 263 (97.6 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 59/176 (33%), Positives = 94/176 (53%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ FY V+ +S
Sbjct: 725 HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 784
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H+ G+FFPG+G + +VGAG G+ + +NV GLD D + FR ++ +
Sbjct: 785 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 844
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D+ G LG +++S K C ++ LM L GG +
Sbjct: 845 FSPDLVLVSAGFDAAEGHPAPLGGYHVSAK----CFGYMTQ---QLMNLAGGAVVL 893
>UNIPROTKB|P83038 [details] [associations]
symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0008134 "transcription factor binding" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
"chromatin organization" evidence=TAS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
Uniprot:P83038
Length = 1080
Score = 268 (99.4 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 62/173 (35%), Positives = 94/173 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S GFCY N + + + + L V + +L VD DVHHG+G ++AFY V+ +
Sbjct: 798 HHAEESTPMGFCYFNSVAIAAKLLQQRLNVSK-ILIVDWDVHHGNGTQQAFYNDPNVLYI 856
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G +VG G G + +N+ GLD D + FR ++ +
Sbjct: 857 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 916
Query: 306 VYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ PD V++ G D++ G LG +NLS K C +L LM L GG
Sbjct: 917 EFAPDVVLVSSGFDAVEGHPTPLGGYNLSAK----CFGYLTK---QLMGLAGG 962
Score = 40 (19.1 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 357 GYTIRNVARCWCYE----TAVA---VGVEPDNKLPYNEYYE 390
GY++ +C E TA+A VGV+P K P +E E
Sbjct: 1035 GYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPDDEPME 1075
>UNIPROTKB|F1PK81 [details] [associations]
symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090050 "positive regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0032703 "negative regulation of interleukin-2 production"
evidence=IEA] [GO:0007043 "cell-cell junction assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
"protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
Length = 951
Score = 262 (97.3 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 63/191 (32%), Positives = 100/191 (52%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA S A GFC+ N + + +L + + ++L +D DVHHG+G ++ FY V+ +S
Sbjct: 668 HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDVHHGNGTQQTFYQDPSVLYIS 727
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H+ G+FFPG+G + +VGAG G+ + +NV GLD D + FR ++ +
Sbjct: 728 LHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRMVVMPIARE 787
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNV 363
+ PD V++ G D+ G LG +++S K + L S +VL GG+ +
Sbjct: 788 FSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDL--T 845
Query: 364 ARCWCYETAVA 374
A C E VA
Sbjct: 846 AICDASEACVA 856
>UNIPROTKB|Q5R902 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
Uniprot:Q5R902
Length = 1122
Score = 262 (97.3 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 66/199 (33%), Positives = 108/199 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL--KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + +LL K++ +VL VD D+HHG+G ++AFY V+ +
Sbjct: 832 HHAEESTAMGFCFFNSVAI-TAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYI 890
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 891 SLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAH 950
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 951 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 1010
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 1011 ICDASEACVSALLSVELQP 1029
>UNIPROTKB|A6NGT0 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 EMBL:AL133500
EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00642981
ProteinModelPortal:A6NGT0 SMR:A6NGT0 STRING:A6NGT0
Ensembl:ENST00000373560 ArrayExpress:A6NGT0 Bgee:A6NGT0
Uniprot:A6NGT0
Length = 156
Score = 236 (88.1 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 59/159 (37%), Positives = 81/159 (50%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSE 201
+ A G +I AA L G +A+NW+GG HHAKK E
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKYE 148
>UNIPROTKB|E1C7C0 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
"heart development" evidence=IEA] [GO:0032869 "cellular response to
insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0070491 "repressing transcription
factor binding" evidence=IEA] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=IEA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
Length = 1069
Score = 260 (96.6 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 66/198 (33%), Positives = 104/198 (52%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL-KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA++S A GFC+ N I + L K++ ++L VD+DVHHG+G ++AFY ++ VS
Sbjct: 783 HHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVS 842
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H++ G+FFPG+G +VG+G G+ + +N+ GLD D + FR +I
Sbjct: 843 LHRYDEGNFFPGSGAPNEVGSGPGEGFNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANE 902
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVK--GH-ADCLRFLRSFNVPLMVLGGGGYTIR 361
+ P+ V++ G D++ G LG + ++ K GH L L V L + GG T
Sbjct: 903 FDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAI 962
Query: 362 NVARCWCYETAVAVGVEP 379
A C + +EP
Sbjct: 963 CDASEACINALLGNELEP 980
>POMBASE|SPBC800.03 [details] [associations]
symbol:clr3 "histone deacetylase (class II) Clr3"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
"maintenance of chromatin silencing at silent mating-type cassette"
evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
PRINTS:PR01270 Uniprot:P56523
Length = 687
Score = 257 (95.5 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 81/319 (25%), Positives = 146/319 (45%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRM----EVNRPFPAGPS---DIRRFHTDEYVEFLASVS 133
HP P R+ I G + +V PA + ++ + H+ E + + +
Sbjct: 77 HPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTE 136
Query: 134 PESSGDPSFSRHLKRFNVGEDCPVFDGLFGFC-QASAGGSIGAAVKLNRGDAD--IAVNW 190
S D + +L++ + D ++ FC + + G +I + G AV
Sbjct: 137 KMSHEDLA---NLEKIS---DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVR 190
Query: 191 AGGLHHAKKSEASGFCYVNDIVLGILELLKVH----RRVLYVDIDVHHGDGVEEAFYTTD 246
G HHA+ + GFC N++ + +L+ +RVL VD D+HHG+G + AFY
Sbjct: 191 PPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDP 249
Query: 247 RVMTVSFHKF--GDFFPGT--GHIKDVGAGQGKFYALNVPLN-DGLDDESFRGLFRPIIQ 301
V+ VS H++ G F+PGT G ++ G G G +N+P + G+ D + F+ ++
Sbjct: 250 NVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVM 309
Query: 302 KVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTI 360
V + PD V++ CG D+ +GD +G F L+ +A + L + + + GGY +
Sbjct: 310 PVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNL 369
Query: 361 RNVARCWCYETAVAVGVEP 379
+++ +G+ P
Sbjct: 370 DSISTSALAVAQSLLGIPP 388
>UNIPROTKB|H9KZE7 [details] [associations]
symbol:H9KZE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
junction assembly" evidence=IEA] [GO:0032703 "negative regulation
of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=IEA] [GO:0071889
"14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
regulation of cell migration involved in sprouting angiogenesis"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
Uniprot:H9KZE7
Length = 951
Score = 259 (96.2 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 58/176 (32%), Positives = 92/176 (52%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ FY V+ +S
Sbjct: 668 HHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYIS 727
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H+ G+FFPG+G +VGAG G+ + +N+ GLD D + FR ++ +
Sbjct: 728 LHRHDDGNFFPGSGAADEVGAGPGEGFNVNIAWTGGLDPPMGDPEYLAAFRTVVMPIAHE 787
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D+ G LG + +S K C ++ LM L GG +
Sbjct: 788 FSPDVVLVSAGFDAADGHPPPLGGYKVSAK----CFGYMTK---QLMSLAGGAIVL 836
Score = 140 (54.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 55/196 (28%), Positives = 89/196 (45%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPES---- 136
HP RI+ + + GL + E R A +++ HT+ +V FL +P +
Sbjct: 540 HPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHV-FLYGTNPLNRLKL 598
Query: 137 -SGDPSFSRHLKRF------NVGEDCP-VFDGLFGFCQAS-AGGSIGA-AVKLNRGDAD- 185
+G + + F VG D +++ L A A GS+ A K+ +
Sbjct: 599 DNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKN 658
Query: 186 -IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAF 242
AV G HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ F
Sbjct: 659 GFAVVRPPG-HHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIF 717
Query: 243 YTTDRVMTVSFHKFGD 258
Y V+ +S H+ D
Sbjct: 718 YRDPDVLYISLHRHDD 733
>UNIPROTKB|F1LSN5 [details] [associations]
symbol:F1LSN5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 IPI:IPI01016416
Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
Length = 932
Score = 264 (98.0 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 64/191 (33%), Positives = 100/191 (52%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ FY RV+ +S
Sbjct: 650 HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPRVLYIS 709
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H+ G+FFPG+G + +VG G G+ + +NV GLD D + FR ++ +
Sbjct: 710 LHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 769
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNV 363
+ PD V++ G D+ G LG +++S K + L S +VL GG+ +
Sbjct: 770 FAPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDL--T 827
Query: 364 ARCWCYETAVA 374
A C E VA
Sbjct: 828 AICDASEACVA 838
Score = 39 (18.8 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 20/74 (27%), Positives = 30/74 (40%)
Query: 99 GLHRRMEVNR--PFPA--------GPSDIRRFHTDEYVEFL-ASVSP-ESSGDPSFSRHL 146
GLHR + R P P GP R+ +V+ + ++SP + PS L
Sbjct: 328 GLHRPLNRTRSEPLPPSATASPLLGPLQPRQDRLKPHVQLIKTAISPPQRPAKPSEKPRL 387
Query: 147 KRFNVGEDCPVFDG 160
++ ED DG
Sbjct: 388 RQIPSAEDLET-DG 400
>UNIPROTKB|F1PN11 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IEA]
[GO:0071218 "cellular response to misfolded protein" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
"polyubiquitinated misfolded protein transport" evidence=IEA]
[GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
complex binding" evidence=IEA] [GO:0070301 "cellular response to
hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
"tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
Length = 1157
Score = 260 (96.6 bits), Expect = 5.3e-19, P = 5.3e-19
Identities = 89/331 (26%), Positives = 143/331 (43%)
Query: 63 RVSYFYEPTIGDYY--YGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
R Y+P + +Y + HP P R+ + GL R PA +++
Sbjct: 493 RTGLVYDPAMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTC 552
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK-- 178
H+ EYV L + E R F+ CP F C A GS+ V+
Sbjct: 553 HSAEYVGRLRAT--EKMKTRELHREGSNFDSIYICP---STFA-CAQLATGSVCRLVEAV 606
Query: 179 LNRGDAD-IAVNWAGGLHHAKKSEASGFCYVNDIVLGI--LELLKVHR-RVLYVDIDVHH 234
L R + AV G HHA++ A GFC+ N + + + + H R+L VD DVHH
Sbjct: 607 LAREVLNGTAVVRPPG-HHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHH 665
Query: 235 GDGVEEAFYTTDRVMTVSFHKF--GDFFP-GT-GHIKDVGAGQGKFYALNVPLNDG-LDD 289
G+G + F V+ +S H++ G FFP G G VG G + +NV N + D
Sbjct: 666 GNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGD 725
Query: 290 ESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NV 348
+ + ++ + + P+ V++ G D+ GD LG +S +G+A L N
Sbjct: 726 ADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANG 785
Query: 349 PLMVLGGGGYTIRNVARCWCYETAVAVGVEP 379
++++ GGY + +++ T +G P
Sbjct: 786 RVVLILEGGYNLTSISESMAACTRSLLGDPP 816
Score = 226 (84.6 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 80/311 (25%), Positives = 134/311 (43%)
Query: 68 YEPTIGDYY--YGQGHPMKPHRIRMAHNLIVHYGL-HRRMEVNRPFPAGPSDIRRFHTDE 124
++ + +++ + P P R+ ++ GL R + F A ++ H+ E
Sbjct: 104 FDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQDGLLDRCVSFQARF-AEKEELMLVHSLE 162
Query: 125 YVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGA---AVKLNR 181
Y++ + + + G+ R L + + + + C A GS+ AV N
Sbjct: 163 YIDLMETTQYMNEGE---LRILA--DTYDSVYLHPNSYT-CACLASGSVLRLVDAVLRNE 216
Query: 182 GDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVE 239
+A+ G HHA+ S G+C N + + + H RVL VD DVHHG G +
Sbjct: 217 IRNGMAIVRPPG-HHAQHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQ 275
Query: 240 EAFYTTDRVMTVSFHKF--GDFFPG--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRG 294
F V+ S H++ G F+P + +G GQG+ Y +NVP N G+ D +
Sbjct: 276 FTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIA 335
Query: 295 LFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG 354
F ++ V +QP V++ G D+L GD G + G A L ++L
Sbjct: 336 AFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAGGKLILS 395
Query: 355 -GGGYTIRNVA 364
GGY +R +A
Sbjct: 396 LEGGYNLRALA 406
>UNIPROTKB|A6ND12 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
KO:K11405 EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00645419
RefSeq:NP_001159894.1 ProteinModelPortal:A6ND12 SMR:A6ND12
STRING:A6ND12 PRIDE:A6ND12 Ensembl:ENST00000373556 UCSC:uc022byw.1
ArrayExpress:A6ND12 Bgee:A6ND12 Uniprot:A6ND12
Length = 158
Score = 233 (87.1 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 58/157 (36%), Positives = 80/157 (50%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKK 199
+ A G +I AA L G +A+NW+GG HHAKK
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKK 146
>UNIPROTKB|A6NJR3 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
KO:K11405 EMBL:AL133500 EMBL:BX295542 IPI:IPI00515065
UniGene:Hs.310536 DNASU:55869 GeneID:55869 KEGG:hsa:55869
HGNC:HGNC:13315 PharmGKB:PA37766 ChiTaRS:HDAC8 GenomeRNAi:55869
NextBio:61182 RefSeq:NP_001159892.1 ProteinModelPortal:A6NJR3
SMR:A6NJR3 STRING:A6NJR3 Ensembl:ENST00000373554 UCSC:uc022byx.1
BindingDB:A6NJR3 ArrayExpress:A6NJR3 Bgee:A6NJR3 Uniprot:A6NJR3
Length = 146
Score = 233 (87.1 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 58/157 (36%), Positives = 80/157 (50%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLF 162
+M + +P A ++ FHTD Y++ L VS E GD ++ + +G DCP +G+F
Sbjct: 53 QMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE--GDDDHPDSIE-YGLGYDCPATEGIF 109
Query: 163 GFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKK 199
+ A G +I AA L G +A+NW+GG HHAKK
Sbjct: 110 DYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKK 146
>UNIPROTKB|F1LSE3 [details] [associations]
symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
Uniprot:F1LSE3
Length = 1155
Score = 259 (96.2 bits), Expect = 6.8e-19, P = 6.8e-19
Identities = 85/312 (27%), Positives = 134/312 (42%)
Query: 81 HPMKPHRIR--MAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSG 138
HP P RI M H + GL R + PA S++ H+ EYVE L + +
Sbjct: 502 HPETPQRILRIMCH--LEEVGLAARCLILPARPALDSELLTCHSAEYVERLRATEKMKTR 559
Query: 139 DPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDA--DIAVNWAGGLHH 196
D R F CP F Q + G + + G+ IA+ G HH
Sbjct: 560 D--LHREGANFESIYICP---STFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPG-HH 613
Query: 197 AKKSEASGFCYVNDIVLGILELLKVHRR---VLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
A+ A GFC+ N + + + R +L VD DVHHG+G + F V+ VS
Sbjct: 614 AEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSL 673
Query: 254 HKF--GDFFP-GT-GHIKDVGAGQGKFYALNVPLNDG-LDDESFRGLFRPIIQKVMEVYQ 308
H++ G FFP G G VG G + +NVP N + D + + ++ + +
Sbjct: 674 HRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRMGDADYLATWHRLVLPIAYEFN 733
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCW 367
P+ V++ G D+ GD LG ++ +G+A L ++++ GGY + +++
Sbjct: 734 PELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLTSISESM 793
Query: 368 CYETAVAVGVEP 379
T +G P
Sbjct: 794 AACTHSLLGDPP 805
Score = 241 (89.9 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 95/351 (27%), Positives = 153/351 (43%)
Query: 40 QLSKMEEPTEGASLVS--GPD-GKKRRV----SYFYEPTIGDYY--YGQGHPMKPHRIR- 89
++ K+ +P E +V G D + RV ++ + D++ + P P R+
Sbjct: 54 KMKKLSQPAEEDLIVGLQGLDLNSETRVPVGTGLVFDEQLNDFHCLWDDSFPENPERLHA 113
Query: 90 MAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRF 149
+ LI+ L R + F A ++ H+ EY++ + + + G+ R L
Sbjct: 114 IKEQLILEGLLGRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGE---LRVLA-- 167
Query: 150 NVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADI----AVNWAGGLHHAKKSEASGF 205
+ + + C A GS+ V G A+I AV G HHA++S G+
Sbjct: 168 GTYDSVYLHPNSYS-CACLATGSVLRLVDAVMG-AEIRNGMAVIRPPG-HHAQRSLMDGY 224
Query: 206 CYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFP 261
C N + + K HR R+L VD DVHHG G + F V+ S H++ G F+P
Sbjct: 225 CMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWP 284
Query: 262 G--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGA 318
+ G GQG+ Y +NVP N G+ D + F I+ V +QP V++ G
Sbjct: 285 HLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGF 344
Query: 319 DSLSGD---RLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVAR 365
D+L GD R G + + G A FL ++L GGY + +A+
Sbjct: 345 DALHGDPKVRQGEMSATPAGFAHLTHFLMGLAGGKLILSLEGGYNLHALAK 395
>MGI|MGI:1333752 [details] [associations]
symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
"actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=ISO] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
"microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0009967 "positive regulation of signal
transduction" evidence=ISO] [GO:0010033 "response to organic
substance" evidence=ISO] [GO:0010469 "regulation of receptor
activity" evidence=ISO] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
deacetylation" evidence=ISO] [GO:0035967 "cellular response to
topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IMP]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
"response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
protein binding" evidence=ISO] [GO:0070201 "regulation of
establishment of protein localization" evidence=IMP] [GO:0070301
"cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
"dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0070932 "histone H3
deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
[GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
Length = 1149
Score = 258 (95.9 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 85/312 (27%), Positives = 138/312 (44%)
Query: 81 HPMKPHRIR--MAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSG 138
HP P RI M H + GL R + PA S++ H+ EYVE L + +
Sbjct: 499 HPETPQRILRIMCH--LEEVGLAARCLILPARPALDSELLTCHSAEYVEHLRTTEKMKTR 556
Query: 139 DPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDA--DIAVNWAGGLHH 196
D R F+ CP F + + G + + G+ IAV G HH
Sbjct: 557 D--LHREGANFDSIYICP---STFACAKLATGAACRLVEAVLSGEVLNGIAVVRPPG-HH 610
Query: 197 AKKSEASGFCYVNDIVLGI--LELLKVHR-RVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
A+ + A GFC+ N + + +++ R+L VD DVHHG+G + F V+ VS
Sbjct: 611 AEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFEDDPSVLYVSL 670
Query: 254 HKF--GDFFP-GT-GHIKDVGAGQGKFYALNVPLNDG-LDDESFRGLFRPIIQKVMEVYQ 308
H++ G FFP G G VG G + +NVP N + D + + ++ + +
Sbjct: 671 HRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDADYLAAWHRLVLPIAYEFN 730
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCW 367
P+ V++ G D+ GD LG ++ +G+A L ++++ GGY + +++
Sbjct: 731 PELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLASISESM 790
Query: 368 CYETAVAVGVEP 379
T +G P
Sbjct: 791 AACTHSLLGDPP 802
Score = 244 (91.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 93/348 (26%), Positives = 149/348 (42%)
Query: 40 QLSKMEEPTEGASLVSGPDG----KKRRV----SYFYEPTIGDYY--YGQGHPMKPHRIR 89
++ K+ +P E LV G G + RV ++ + D++ + P P R+
Sbjct: 54 KMKKLSQPAE-EDLVVGLQGLDLNPETRVPVGTGLVFDEQLNDFHCLWDDSFPESPERLH 112
Query: 90 MAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRF 149
++ GL R + A ++ H+ EY++ + + + G+ R L
Sbjct: 113 AIREQLILEGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGE---LRVLAE- 168
Query: 150 NVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADI----AVNWAGGLHHAKKSEASGF 205
+ + + C A GS+ V G A+I AV G HHA+ + G+
Sbjct: 169 -TYDSVYLHPNSYS-CACLATGSVLRLVDALMG-AEIRNGMAVIRPPG-HHAQHNLMDGY 224
Query: 206 CYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFP 261
C N + + K HR RVL VD DVHHG G + F V+ S H++ G F+P
Sbjct: 225 CMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWP 284
Query: 262 G--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGA 318
+ +G GQG+ Y +NVP N G+ D + F I+ V +QP V++ G
Sbjct: 285 HLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEFQPQLVLVAAGF 344
Query: 319 DSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVAR 365
D+L GD G + G A L ++L GGY +R +A+
Sbjct: 345 DALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILSLEGGYNLRALAK 392
>UNIPROTKB|Q80ZH1 [details] [associations]
symbol:HDAC5 "Histone deacetylase 5" species:10029
"Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
myotube differentiation" evidence=ISS] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
Length = 1111
Score = 265 (98.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 66/199 (33%), Positives = 108/199 (54%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELL--KVH-RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + +LL K++ +VL VD D+HHG+G ++AFY V+ +
Sbjct: 821 HHAEESTAMGFCFFNSVAI-TAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYI 879
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVME 305
S H++ G+FFPG+G ++VG G G Y +NV G+D D + FR ++ +
Sbjct: 880 SLHRYDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAH 939
Query: 306 VYQPDAVVLQCGADSLSG--DRLGCFNLSVK--GHADC-LRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D++ G LG ++++ + GH L L V L + GG T
Sbjct: 940 EFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTA 999
Query: 361 RNVARCWCYETAVAVGVEP 379
A C ++V ++P
Sbjct: 1000 ICDASEACVSALLSVELQP 1018
Score = 37 (18.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 41 LSKMEEPTEGASLVSGPDGKK 61
LSK +EPT G+ S P K
Sbjct: 183 LSKSKEPTPGSLNHSLPQHPK 203
>MGI|MGI:1891835 [details] [associations]
symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0004407 "histone deacetylase activity" evidence=TAS]
[GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
"nervous system development" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
modification" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
interleukin-2 production" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0034739 "histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
"B cell activation" evidence=TAS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
evidence=ISO] [GO:0090050 "positive regulation of cell migration
involved in sprouting angiogenesis" evidence=ISO]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
Length = 938
Score = 256 (95.2 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 58/176 (32%), Positives = 93/176 (52%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA S A GFC+ N + + +L + + ++L VD DVHHG+G ++ FY V+ +S
Sbjct: 656 HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYIS 715
Query: 253 FHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD----DESFRGLFRPIIQKVMEV 306
H+ G+FFPG+G + +VG G G+ + +NV GLD D + FR ++ +
Sbjct: 716 LHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIARE 775
Query: 307 YQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTI 360
+ PD V++ G D+ G LG +++S K C ++ LM L GG +
Sbjct: 776 FAPDLVLVSAGFDAAEGHPAPLGGYHVSAK----CFGYMTQ---QLMNLAGGAVVL 824
>TIGR_CMR|SPO_2002 [details] [associations]
symbol:SPO_2002 "acetylpolyamine aminohydrolase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
Length = 341
Score = 233 (87.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 64/208 (30%), Positives = 98/208 (47%)
Query: 155 CPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLG 214
CP+ +G + SA +I A + +G+ V HHA A GFC++N+ +
Sbjct: 117 CPIAEGTWEAAYWSAQSAITGADLIIQGERSAYVLSRPPGHHAFGDLAGGFCFLNNSAIA 176
Query: 215 ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH----KFGDFFPGTGHIKDVG 270
L R +DIDVHHG+G + FY D V+TVS H +F FF GH ++ G
Sbjct: 177 AERLRAAGLRPAILDIDVHHGNGTQGIFYERDDVLTVSIHADPARFYPFF--WGHAQERG 234
Query: 271 AGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFN 330
AG+G Y LN+PL G D+ + +++V + +V+ G D+ D
Sbjct: 235 AGRGLGYNLNLPLARGTGDDDYLDTLSVALRQVAS-FGSRVLVVALGLDASIDDPFQGLA 293
Query: 331 LSVKGHADCLRFLRSFNVPLMVLGGGGY 358
++ G A L VP++ + GGY
Sbjct: 294 ITQDGFARIGAALAGTRVPVLFVQEGGY 321
Score = 44 (20.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 109 PFPAGPSDIRRFHTDEYVEFLASV 132
P AG I H+ EY+ FL ++
Sbjct: 50 PGDAGLGPIAALHSPEYLTFLQTI 73
>UNIPROTKB|Q9UBN7 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
"microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
[GO:0004407 "histone deacetylase activity" evidence=IDA]
[GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
"protein deacetylation" evidence=IMP] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IMP]
[GO:0043242 "negative regulation of protein complex disassembly"
evidence=IMP] [GO:0060632 "regulation of microtubule-based
movement" evidence=IC] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IMP] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0070848 "response to growth factor stimulus"
evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
[GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
response to topologically incorrect protein" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
[GO:0051354 "negative regulation of oxidoreductase activity"
evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
transport" evidence=IMP] [GO:0051788 "response to misfolded
protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
evidence=IDA] [GO:0010033 "response to organic substance"
evidence=IMP] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009967 "positive regulation of signal
transduction" evidence=IMP] [GO:0010469 "regulation of receptor
activity" evidence=IMP] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
evidence=IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=IMP]
[GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005829 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
Length = 1215
Score = 257 (95.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 82/310 (26%), Positives = 133/310 (42%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
HP P RI + GL R P PA +++ H+ EYV L + E
Sbjct: 500 HPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRAT--EKMKTR 557
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDA--DIAVNWAGGLHHAK 198
R F+ CP F Q + G + + G+ AV G HHA+
Sbjct: 558 ELHRESSNFDSIYICP---STFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPG-HHAE 613
Query: 199 KSEASGFCYVNDIVLGI--LELLKVHR-RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHK 255
+ A GFC+ N + + + + H R+L VD DVHHG+G + F V+ VS H+
Sbjct: 614 QDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHR 673
Query: 256 F--GDFFP-GT-GHIKDVGAGQGKFYALNVPLNDG-LDDESFRGLFRPIIQKVMEVYQPD 310
+ G FFP G G +G G + +NV N + D + + ++ + + P+
Sbjct: 674 YDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPE 733
Query: 311 AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCY 369
V++ G D+ GD LG +S +G+A L + ++++ GGY + +++
Sbjct: 734 LVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAA 793
Query: 370 ETAVAVGVEP 379
T +G P
Sbjct: 794 CTRSLLGDPP 803
Score = 230 (86.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 82/296 (27%), Positives = 128/296 (43%)
Query: 82 PMKPHRIRMAHNLIVHYGL-HRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
P P R+ ++ GL R + F A ++ H+ EY++ + + + G+
Sbjct: 106 PEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGE- 163
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADI----AVNWAGGLHH 196
R L + + + + C A GS+ V G A+I A+ G HH
Sbjct: 164 --LRVLA--DTYDSVYLHPNSYS-CACLASGSVLRLVDAVLG-AEIRNGMAIIRPPG-HH 216
Query: 197 AKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH 254
A+ S G+C N + + + HR RVL VD DVHHG G + F V+ S H
Sbjct: 217 AQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIH 276
Query: 255 KF--GDFFPG--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQP 309
++ G F+P + G GQG+ Y +NVP N G+ D + F ++ V +QP
Sbjct: 277 RYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQP 336
Query: 310 DAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVA 364
V++ G D+L GD G + G A L ++L GGY +R +A
Sbjct: 337 QLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALA 392
>UNIPROTKB|B4DZH6 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
Length = 1229
Score = 257 (95.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 82/310 (26%), Positives = 133/310 (42%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
HP P RI + GL R P PA +++ H+ EYV L + E
Sbjct: 514 HPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRAT--EKMKTR 571
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDA--DIAVNWAGGLHHAK 198
R F+ CP F Q + G + + G+ AV G HHA+
Sbjct: 572 ELHRESSNFDSIYICP---STFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPG-HHAE 627
Query: 199 KSEASGFCYVNDIVLGI--LELLKVHR-RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHK 255
+ A GFC+ N + + + + H R+L VD DVHHG+G + F V+ VS H+
Sbjct: 628 QDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHR 687
Query: 256 F--GDFFP-GT-GHIKDVGAGQGKFYALNVPLNDG-LDDESFRGLFRPIIQKVMEVYQPD 310
+ G FFP G G +G G + +NV N + D + + ++ + + P+
Sbjct: 688 YDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPE 747
Query: 311 AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCY 369
V++ G D+ GD LG +S +G+A L + ++++ GGY + +++
Sbjct: 748 LVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAA 807
Query: 370 ETAVAVGVEP 379
T +G P
Sbjct: 808 CTRSLLGDPP 817
Score = 230 (86.0 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 82/296 (27%), Positives = 128/296 (43%)
Query: 82 PMKPHRIRMAHNLIVHYGL-HRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
P P R+ ++ GL R + F A ++ H+ EY++ + + + G+
Sbjct: 120 PEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGE- 177
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADI----AVNWAGGLHH 196
R L + + + + C A GS+ V G A+I A+ G HH
Sbjct: 178 --LRVLA--DTYDSVYLHPNSYS-CACLASGSVLRLVDAVLG-AEIRNGMAIIRPPG-HH 230
Query: 197 AKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH 254
A+ S G+C N + + + HR RVL VD DVHHG G + F V+ S H
Sbjct: 231 AQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIH 290
Query: 255 KF--GDFFPG--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQP 309
++ G F+P + G GQG+ Y +NVP N G+ D + F ++ V +QP
Sbjct: 291 RYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQP 350
Query: 310 DAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVA 364
V++ G D+L GD G + G A L ++L GGY +R +A
Sbjct: 351 QLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALA 406
>FB|FBgn0041210 [details] [associations]
symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
[GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
Bgee:Q8I9J6 Uniprot:Q8I9J6
Length = 1255
Score = 255 (94.8 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 69/208 (33%), Positives = 110/208 (52%)
Query: 168 SAGGSIGAAVKLNRGDA--DIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH--- 222
+AG I A+K +GD AV G HHA+ + A GFC+ N I + +LL+
Sbjct: 942 AAGCVIDLALKTAKGDLRNGFAVVRPPG-HHAEANLAMGFCFFNSIAIAA-KLLRQRMPE 999
Query: 223 -RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYAL 279
RR+L VD DVHHG+G ++AFY + ++ +S H+ G+FFPGTG + G+G G + +
Sbjct: 1000 VRRILIVDWDVHHGNGTQQAFYQSPDILYLSIHRHDDGNFFPGTGGPTECGSGAGLGFNV 1059
Query: 280 NVP----LNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDR--LGCFNLSV 333
N+ LN L D + FR ++ + + PD V++ G D+ +G LG +++S
Sbjct: 1060 NISWSGALNPPLGDAEYIAAFRTVVMPIARSFNPDIVLVSSGFDAATGHPAPLGGYHVSP 1119
Query: 334 KGHADCLR-FLRSFNVPLMVLGGGGYTI 360
R L+ N +++ GGY +
Sbjct: 1120 ACFGFMTRELLQLANGKVVLALEGGYDL 1147
>UNIPROTKB|G4NCI1 [details] [associations]
symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
"Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
silencing at telomere" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
chromatin" evidence=ISS] [GO:0031060 "regulation of histone
methylation" evidence=ISS] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
"histone H3 deacetylation" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
Uniprot:G4NCI1
Length = 758
Score = 250 (93.1 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 80/292 (27%), Positives = 135/292 (46%)
Query: 112 AGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGL-FGFCQASAG 170
A +I H ++ +++ +S + + R K + G+ L F SAG
Sbjct: 151 ATKEEICLVHYAKHYDWVKELSTKPTAQ--LRRLTKELDKGQTSVYVGSLTFEASLISAG 208
Query: 171 GSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEASGFCYVNDIVLGI----LELLKVHRR 224
G+I + G AV G HHA++ A GFC N++ + E ++ ++
Sbjct: 209 GAIETCKSIVSGQIKNGFAVIRPPG-HHAEQDSAMGFCIFNNVPIAAKVCQAEYPEICQK 267
Query: 225 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFH--KFGDFFPGT--------GHIKDVGAGQG 274
VL +D DVHHG+G++ FY V+ +S H K G+F+PG G I G+G G
Sbjct: 268 VLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGEFYPGKPENPMTADGSISSCGSGPG 327
Query: 275 KFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLG-CFNLS 332
+N+ +D G+ D + F+ II + + PD V++ G D+ +GD+LG CF ++
Sbjct: 328 LGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQLGGCF-VT 386
Query: 333 VKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKL 383
+A L S + + V GGY + +++ +G EP K+
Sbjct: 387 PPCYAHMTHMLMSLAHGRVAVCLEGGYNLSAISKSALAVARTLMG-EPPPKM 437
>UNIPROTKB|E5RGV4 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00978755 ProteinModelPortal:E5RGV4 SMR:E5RGV4
Ensembl:ENST00000518690 ArrayExpress:E5RGV4 Bgee:E5RGV4
Uniprot:E5RGV4
Length = 71
Score = 226 (84.6 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 37/73 (50%), Positives = 58/73 (79%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSF 142
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--Y 58
Query: 143 SRHLKRFNVGEDC 155
S+ ++RFNVGEDC
Sbjct: 59 SKQMQRFNVGEDC 71
>UNIPROTKB|F1MQP3 [details] [associations]
symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070848 "response
to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
protein binding" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0043241 "protein complex
disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
[GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
leading edge" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=IEA] [GO:0010469 "regulation of receptor activity"
evidence=IEA] [GO:0009967 "positive regulation of signal
transduction" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
deacetylase activity" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
Length = 1128
Score = 251 (93.4 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 80/316 (25%), Positives = 141/316 (44%)
Query: 63 RVSYFYEPTIGDYY--YGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
R Y+ + D++ + HP P RI + + GL +R PA +++
Sbjct: 481 RTGLVYDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAELL-C 539
Query: 121 HTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCP-VFDGLFGFCQASAGGSIGAAVKL 179
H+ E++E L + + R L+R D + F Q +AG + +
Sbjct: 540 HSAEHLERLRATEKMKT------RELRREGANYDSIYICSSTFACAQLAAGAACRLVEAV 593
Query: 180 NRGDA--DIAVNWAGGLHHAKKSEASGFCYVNDIVLGI--LELLKVHR-RVLYVDIDVHH 234
G+ +AV G HHA+ A GFC+ N + + + + H R+L VD D+HH
Sbjct: 594 LAGEVLNGVAVVRPPG-HHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHH 652
Query: 235 GDGVEEAFYTTDRVMTVSFHKF--GDFFP-GT-GHIKDVGAGQGKFYALNVPLNDG-LDD 289
G+G + F V+ +S H++ G FFP G G +G G + +NV N + D
Sbjct: 653 GNGTQHIFEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGD 712
Query: 290 ESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NV 348
+ + ++ V + P+ V++ G D+ GD LG +S +G+A L N
Sbjct: 713 ADYLAAWHRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANG 772
Query: 349 PLMVLGGGGYTIRNVA 364
++++ GGY + +++
Sbjct: 773 HIILILEGGYNLTSIS 788
Score = 228 (85.3 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 57/178 (32%), Positives = 86/178 (48%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HHA+ S G+C N + + + H +RVL VD DVHHG G++ AF V+ S
Sbjct: 215 HHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFS 274
Query: 253 FHKF--GDFFPG--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVY 307
H++ G F+P + G GQG+ Y +NVP N G+ D + F ++ V +
Sbjct: 275 IHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEF 334
Query: 308 QPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVA 364
QP V++ G D+L GD G + G A L ++L GGY + ++A
Sbjct: 335 QPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAEGKLILSLEGGYNLHSLA 392
>UNIPROTKB|Q20296 [details] [associations]
symbol:hda-6 "Histone deacetylase 6" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
Length = 955
Score = 250 (93.1 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 83/300 (27%), Positives = 139/300 (46%)
Query: 81 HPMKPHRIRMAHNLIVHYG-LHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
HP KP R R + G L + ++ N A +IR HT + +E L + E+ D
Sbjct: 446 HPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTT--ETMKD 503
Query: 140 PSFSRHL-KRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDAD-----IAVNWAGG 193
K FN + + + G + + ++ DA + V G
Sbjct: 504 EELMEEAEKEFN---SIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPG- 559
Query: 194 LHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA S++SGFC N++ + + H+ RVL +D DVHHG+G +E FY VM +
Sbjct: 560 -HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYM 618
Query: 252 SFHKF--GDFFPGTGHIKD---VGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVME 305
S H+ G+F+P G KD VG G G+ ++NVP + + D ++ F+ +I +
Sbjct: 619 SIHRHDKGNFYP-IGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAY 677
Query: 306 VYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVA 364
+ PD V++ G D+ D LG + ++ + A L S ++ + GGY + +++
Sbjct: 678 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 737
Score = 221 (82.9 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 60/183 (32%), Positives = 88/183 (48%)
Query: 195 HHAKKSEASGFCYVNDIVLGILE-LLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
HHA GFC N++ E R+L VD+DVHHG G + FY RV+ S
Sbjct: 145 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 204
Query: 254 HKF--GDFFPGT--GHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQ 308
H+ G F+P +G+G+G Y N+ LN+ G D + + ++ + +
Sbjct: 205 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 264
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF--NVPLMVLGGG-GYTIRNVA- 364
P V++ G D+L GD LG L+ G++ L L+S L+VL GG + I VA
Sbjct: 265 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 324
Query: 365 -RC 366
RC
Sbjct: 325 QRC 327
>WB|WBGene00018319 [details] [associations]
symbol:hda-6 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 250 (93.1 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 83/300 (27%), Positives = 139/300 (46%)
Query: 81 HPMKPHRIRMAHNLIVHYG-LHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
HP KP R R + G L + ++ N A +IR HT + +E L + E+ D
Sbjct: 448 HPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTT--ETMKD 505
Query: 140 PSFSRHL-KRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDAD-----IAVNWAGG 193
K FN + + + G + + ++ DA + V G
Sbjct: 506 EELMEEAEKEFN---SIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPG- 561
Query: 194 LHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA S++SGFC N++ + + H+ RVL +D DVHHG+G +E FY VM +
Sbjct: 562 -HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYM 620
Query: 252 SFHKF--GDFFPGTGHIKD---VGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVME 305
S H+ G+F+P G KD VG G G+ ++NVP + + D ++ F+ +I +
Sbjct: 621 SIHRHDKGNFYP-IGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAY 679
Query: 306 VYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVA 364
+ PD V++ G D+ D LG + ++ + A L S ++ + GGY + +++
Sbjct: 680 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 739
Score = 221 (82.9 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 60/183 (32%), Positives = 88/183 (48%)
Query: 195 HHAKKSEASGFCYVNDIVLGILE-LLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
HHA GFC N++ E R+L VD+DVHHG G + FY RV+ S
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206
Query: 254 HKF--GDFFPGT--GHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQ 308
H+ G F+P +G+G+G Y N+ LN+ G D + + ++ + +
Sbjct: 207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 266
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF--NVPLMVLGGG-GYTIRNVA- 364
P V++ G D+L GD LG L+ G++ L L+S L+VL GG + I VA
Sbjct: 267 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 326
Query: 365 -RC 366
RC
Sbjct: 327 QRC 329
>UNIPROTKB|A7LPD8 [details] [associations]
symbol:hda-6 "Protein HDA-6, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
Length = 957
Score = 250 (93.1 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 83/300 (27%), Positives = 139/300 (46%)
Query: 81 HPMKPHRIRMAHNLIVHYG-LHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
HP KP R R + G L + ++ N A +IR HT + +E L + E+ D
Sbjct: 448 HPEKPARTRRILKTLRESGVLEKCVDRNCERIATNEEIRLVHTKKMLEHLRTT--ETMKD 505
Query: 140 PSFSRHL-KRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDAD-----IAVNWAGG 193
K FN + + + G + + ++ DA + V G
Sbjct: 506 EELMEEAEKEFN---SIYLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRNALVIVRPPG- 561
Query: 194 LHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA S++SGFC N++ + + H+ RVL +D DVHHG+G +E FY VM +
Sbjct: 562 -HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYM 620
Query: 252 SFHKF--GDFFPGTGHIKD---VGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVME 305
S H+ G+F+P G KD VG G G+ ++NVP + + D ++ F+ +I +
Sbjct: 621 SIHRHDKGNFYP-IGEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAY 679
Query: 306 VYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVA 364
+ PD V++ G D+ D LG + ++ + A L S ++ + GGY + +++
Sbjct: 680 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 739
Score = 221 (82.9 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 60/183 (32%), Positives = 88/183 (48%)
Query: 195 HHAKKSEASGFCYVNDIVLGILE-LLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
HHA GFC N++ E R+L VD+DVHHG G + FY RV+ S
Sbjct: 147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206
Query: 254 HKF--GDFFPGT--GHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQ 308
H+ G F+P +G+G+G Y N+ LN+ G D + + ++ + +
Sbjct: 207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 266
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF--NVPLMVLGGG-GYTIRNVA- 364
P V++ G D+L GD LG L+ G++ L L+S L+VL GG + I VA
Sbjct: 267 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 326
Query: 365 -RC 366
RC
Sbjct: 327 QRC 329
>TIGR_CMR|SPO_3195 [details] [associations]
symbol:SPO_3195 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
Uniprot:Q5LNK8
Length = 364
Score = 238 (88.8 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 85/294 (28%), Positives = 125/294 (42%)
Query: 80 GHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
G P P R NLI GLH +E+ A D+ R H Y++ +S G+
Sbjct: 37 GLPEAPETKRRLKNLIEVTGLHSDLEMVTGGSATIEDVLRVHPRSYIDEFRRLSDSGGGE 96
Query: 140 PSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAA--VKLNRGDADIAVNWAGGLHHA 197
+G P G F SAG I A V R A++ G HH
Sbjct: 97 -----------LGLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNAYALSRPPG-HHC 144
Query: 198 KKSEASGFCYVNDIVLGILELLKVHR---RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH 254
+GFC + +I + I E K +V +D DVHHG+G E +Y D V+T+S H
Sbjct: 145 LPDWPNGFCLLANIAIAI-EAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIH 203
Query: 255 KFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESF-RGLFRPIIQKVMEVYQPDAVV 313
+ + TG I D G G G + +N+PL G ++ R II K ++ + D V+
Sbjct: 204 QDRCYPHDTGSIDDQGKGAGLGFNMNIPLPPGCGHNAYVEATERLIIPK-LKAFDADLVI 262
Query: 314 LQCGADSLSGDRLGCFNLSVKGHADCLR-FLRSFNVPLMVLGGGGYTIRNVARC 366
+ CG D+ D L S + + R ++ + L+ GGY+ V C
Sbjct: 263 IACGFDAGGFDPLARMMCSAETFREMTRRVMQVSDGKLVAAHEGGYSELYVPFC 316
>WB|WBGene00001837 [details] [associations]
symbol:hda-4 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
"histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
Length = 869
Score = 243 (90.6 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 74/299 (24%), Positives = 141/299 (47%)
Query: 87 RIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHL 146
RI+ + ++ +G ++ E A ++ H+ Y F A + S L
Sbjct: 489 RIQSIWSKLIEHGHVQKCEKVTAKKASLEQLQLVHSQTYTTFFAVSPTACLKIDANSLPL 548
Query: 147 KRF------NVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAV-NWAGGL----H 195
KRF +G D + Q +A + G ++L+ A+ + N + H
Sbjct: 549 KRFLQLPCGGIGVDSDTYFN-DASTQTAARLAAGTLIELSSQVAEGRLKNGFACIRPPGH 607
Query: 196 HAKKSEASGFCYVNDIVLGILELLKVH----RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HA+ +A GFC+ N++ + + L + ++ +D DVHHG+G + +F V+ +
Sbjct: 608 HAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLYM 667
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLN-DGLDDESFRGLFRPIIQKVMEVYQ 308
S H+ G+FFPGTG + +VG K +NVP + D + D + +R +I+ VM +
Sbjct: 668 SLHRHDKGNFFPGTGSVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMASFC 727
Query: 309 PDAVVLQCGADSLSG--DRLGCFNLSVKGHADCLRFLRSFNVPLMVLG-GGGYTIRNVA 364
PD +++ G D+ G + LG + ++ + + L ++ +VL GGY +++++
Sbjct: 728 PDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKSLLNYASGKVVLALEGGYDLKSIS 786
>UNIPROTKB|E7EWI8 [details] [associations]
symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854 ChiTaRS:HDAC3
IPI:IPI00930193 ProteinModelPortal:E7EWI8 SMR:E7EWI8
Ensembl:ENST00000523353 ArrayExpress:E7EWI8 Bgee:E7EWI8
Uniprot:E7EWI8
Length = 128
Score = 218 (81.8 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 32/68 (47%), Positives = 54/68 (79%)
Query: 62 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFH 121
+ V+YFY+P +G+++YG GHPMKPHR+ + H+L++HYGL+++M V +P+ A D+ RFH
Sbjct: 3 KTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFH 62
Query: 122 TDEYVEFL 129
+++Y + L
Sbjct: 63 SEDYTDSL 70
Score = 205 (77.2 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 42/85 (49%), Positives = 58/85 (68%)
Query: 294 GLFRP-IIQKVMEVYQPDAVVLQCG--ADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPL 350
GL++ I+ K + Q D DSL DRLGCFNLS++GH +C+ +++SFN+PL
Sbjct: 40 GLYKKMIVFKPYQASQHDMCRFHSEDYTDSLGCDRLGCFNLSIRGHGECVEYVKSFNIPL 99
Query: 351 MVLGGGGYTIRNVARCWCYETAVAV 375
+VLGGGGYT+RNVA YET++ V
Sbjct: 100 LVLGGGGYTVRNVAT---YETSLLV 121
>UNIPROTKB|Q3Z9M2 [details] [associations]
symbol:DET0330 "Histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 231 (86.4 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 74/267 (27%), Positives = 114/267 (42%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
H P R+ I +GL R+ P G ++ FHT +Y+ + V G
Sbjct: 19 HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTRKYISRVEEVGFSGGGW- 77
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIA-VNWAGGLHHAKK 199
+ +D + + + GG + K+ G+ + A V HHA
Sbjct: 78 ----------LDQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALP 127
Query: 200 SEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG 257
+ GFC N++ LG L L HR RV VD DVHHG+G++ RV +S H+
Sbjct: 128 EASMGFCIFNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQI- 186
Query: 258 DFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCG 317
FP TG + G Q LN+PL G D ++ +F +I + P+ +++ G
Sbjct: 187 HHFPFTGDSCEDGPFQN---ILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAG 243
Query: 318 ADSLSGDRLGCFNLSVKGHADCLRFLR 344
D+ D +G LS +G A R L+
Sbjct: 244 YDAHFADDMGEMCLSQQGFAGITRALK 270
>TIGR_CMR|DET_0330 [details] [associations]
symbol:DET_0330 "histone deacetylase family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
"histone deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
Length = 341
Score = 231 (86.4 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 74/267 (27%), Positives = 114/267 (42%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
H P R+ I +GL R+ P G ++ FHT +Y+ + V G
Sbjct: 19 HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTRKYISRVEEVGFSGGGW- 77
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIA-VNWAGGLHHAKK 199
+ +D + + + GG + K+ G+ + A V HHA
Sbjct: 78 ----------LDQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALP 127
Query: 200 SEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG 257
+ GFC N++ LG L L HR RV VD DVHHG+G++ RV +S H+
Sbjct: 128 EASMGFCIFNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQI- 186
Query: 258 DFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCG 317
FP TG + G Q LN+PL G D ++ +F +I + P+ +++ G
Sbjct: 187 HHFPFTGDSCEDGPFQN---ILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAG 243
Query: 318 ADSLSGDRLGCFNLSVKGHADCLRFLR 344
D+ D +G LS +G A R L+
Sbjct: 244 YDAHFADDMGEMCLSQQGFAGITRALK 270
>UNIPROTKB|Q9KQF6 [details] [associations]
symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
Uniprot:Q9KQF6
Length = 306
Score = 222 (83.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 82/308 (26%), Positives = 129/308 (41%)
Query: 64 VSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY-----GLHRRMEVNRPFPAGPSDIR 118
+ Y P GH ++ R+ + IV E + P A S I
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGS-IGAAV 177
R H +YV+ L G S ++ ++R P+ + S GG+ +
Sbjct: 62 RLHDPDYVQALLE------GTLSAAK-MRRIGFPWSKPLIERTL----YSVGGTCLTVEQ 110
Query: 178 KLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKVHRRVLYVDIDVHH 234
L G +A++ +GG HHA SGFC ND+ + L L V + VL +D DVHH
Sbjct: 111 ALQSG---VAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDK-VLIIDSDVHH 166
Query: 235 GDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRG 294
GDG D ++T+SFH +F P + G YA N DE F
Sbjct: 167 GDGTATLCAERDEIITLSFHCDKNF-PARKPASSMDVG----YA-----NQ-TGDEEFLS 215
Query: 295 LFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL----RSFNVPL 350
F +++ + +++PD ++ G D + D LG ++S A RF+ + ++P+
Sbjct: 216 TFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPI 275
Query: 351 MVLGGGGY 358
+ GGGY
Sbjct: 276 ACVIGGGY 283
>TIGR_CMR|VC_2042 [details] [associations]
symbol:VC_2042 "histone deacetylase/AcuC/AphA family
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
ProtClustDB:CLSK874650 Uniprot:Q9KQF6
Length = 306
Score = 222 (83.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 82/308 (26%), Positives = 129/308 (41%)
Query: 64 VSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHY-----GLHRRMEVNRPFPAGPSDIR 118
+ Y P GH ++ R+ + IV E + P A S I
Sbjct: 2 IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRIT 61
Query: 119 RFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGS-IGAAV 177
R H +YV+ L G S ++ ++R P+ + S GG+ +
Sbjct: 62 RLHDPDYVQALLE------GTLSAAK-MRRIGFPWSKPLIERTL----YSVGGTCLTVEQ 110
Query: 178 KLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKVHRRVLYVDIDVHH 234
L G +A++ +GG HHA SGFC ND+ + L L V + VL +D DVHH
Sbjct: 111 ALQSG---VAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDK-VLIIDSDVHH 166
Query: 235 GDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRG 294
GDG D ++T+SFH +F P + G YA N DE F
Sbjct: 167 GDGTATLCAERDEIITLSFHCDKNF-PARKPASSMDVG----YA-----NQ-TGDEEFLS 215
Query: 295 LFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL----RSFNVPL 350
F +++ + +++PD ++ G D + D LG ++S A RF+ + ++P+
Sbjct: 216 TFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPI 275
Query: 351 MVLGGGGY 358
+ GGGY
Sbjct: 276 ACVIGGGY 283
>UNIPROTKB|F1SEI2 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005080 "protein
kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
Length = 122
Score = 215 (80.7 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 39/99 (39%), Positives = 64/99 (64%)
Query: 195 HHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HHA++S A GFC+ N + + + + L + + +L VD+DVHHG+G ++AFY ++ +
Sbjct: 13 HHAEESTAMGFCFFNSVAITAKYLRDQLNISK-ILIVDLDVHHGNGTQQAFYADPSILYI 71
Query: 252 SFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD 288
S H++ G+FFPG+G +VG G G+ Y +N+ GLD
Sbjct: 72 SLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 110
>RGD|619976 [details] [associations]
symbol:Hdac2 "histone deacetylase 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
promoter binding" evidence=IDA] [GO:0001103 "RNA polymerase II
repressing transcription factor binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0006344 "maintenance of chromatin silencing" evidence=ISO]
[GO:0006476 "protein deacetylation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0009913
"epidermal cell differentiation" evidence=ISO] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=ISO] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO;IMP] [GO:0016358 "dendrite development"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=ISO;IMP]
[GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581 "NuRD complex"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031072 "heat shock
protein binding" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=ISO] [GO:0033558 "protein deacetylase activity"
evidence=ISO] [GO:0034605 "cellular response to heat" evidence=IEP]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO] [GO:0042220 "response
to cocaine" evidence=IEP] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042733 "embryonic digit morphogenesis"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=ISO] [GO:0055013 "cardiac muscle cell
development" evidence=ISO] [GO:0060044 "negative regulation of
cardiac muscle cell proliferation" evidence=ISO] [GO:0060297
"regulation of sarcomere organization" evidence=ISO] [GO:0060789
"hair follicle placode formation" evidence=ISO] [GO:0061029 "eyelid
development in camera-type eye" evidence=ISO] [GO:0061198
"fungiform papilla formation" evidence=ISO] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISO] [GO:0090311 "regulation of protein deacetylation"
evidence=ISO] RGD:619976 GO:GO:0045892 Reactome:REACT_111984
GO:GO:0005654 GO:GO:0034605 GO:GO:0042493 GO:GO:0042220
GO:GO:0000785 GO:GO:0031072 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 GO:GO:0010977 EMBL:AF321130 IPI:IPI00914263
UniGene:Rn.1797 ProteinModelPortal:Q99PA1 DIP:DIP-46498N
STRING:Q99PA1 PhosphoSite:Q99PA1 InParanoid:Q99PA1
Genevestigator:Q99PA1 Uniprot:Q99PA1
Length = 174
Score = 211 (79.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 40/72 (55%), Positives = 48/72 (66%)
Query: 369 YETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDMEKIRNTLLEQLSGL 428
YETAVA+ E N+LPYN+Y+EYFGPD+ LH+ P NM N N + MEKI+ L E L L
Sbjct: 1 YETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRML 60
Query: 429 IHAPSVPFQTTP 440
HAP V Q P
Sbjct: 61 PHAPGVQMQAIP 72
>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
symbol:hdac10 "histone deacetylase 10"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
Uniprot:F1QCV2
Length = 728
Score = 234 (87.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 74/310 (23%), Positives = 144/310 (46%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSR 144
P R+ +++ + +GL +R + A +I H++EY+E + +P + + +
Sbjct: 83 PERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLAHSEEYLEAVKQ-TPGMNVEELMA- 140
Query: 145 HLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDA--DIAVNWAGGLHHAKKSEA 202
K++N D ++ + +AG ++ + + + +A+ G HH+++S A
Sbjct: 141 FSKKYN---DVYFHQNIYHCAKLAAGATLQLVDSVMKREVRNGMALVRPPG-HHSQRSAA 196
Query: 203 SGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG--D 258
+GFC N++ + L K + R+L VD DVHHG G++ F V+ S+H++
Sbjct: 197 NGFCVFNNVAIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQS 256
Query: 259 FFPGT--GHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVVLQ 315
F+P VG G+G + +N+P N G+ + + F ++ V + P+ V++
Sbjct: 257 FWPNLPESDYSSVGKGKGSGFNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELVIVS 316
Query: 316 CGADSLSGDRLG--CFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAV 373
G DS GD G C + H L + +VL GG Y + ++ + C
Sbjct: 317 AGFDSAIGDPEGEMCALPEIFAHLTHLLMPLAAGKMCVVLEGG-YNLTSLGQSVCQTVHS 375
Query: 374 AVGVEPDNKL 383
+G +P ++
Sbjct: 376 LLG-DPTPRI 384
>TIGR_CMR|CHY_0263 [details] [associations]
symbol:CHY_0263 "histone deacetylase domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
Uniprot:Q3AFE9
Length = 433
Score = 229 (85.7 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 59/200 (29%), Positives = 98/200 (49%)
Query: 168 SAGGSIGAAVKLNRGDAD--IAVNWAGGLHHAKKSEAS--GFCYVNDIVLGI--LELLKV 221
+AG I A ++ G+ A+ G HHA ++ GFC +N++ + + L +K
Sbjct: 79 AAGSCIELAERILAGEVKNGFALVRPPG-HHATRTVYGNRGFCNINNVAITVDYLRWVKG 137
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG-DFFPGTGHIKDVGAGQGKFYALN 280
+++ +D DVHHGDG ++ FY V+ +S H+ G +PGTG I + G +N
Sbjct: 138 VKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQDGRTLYPGTGFIDEAGTPNAYGTTIN 197
Query: 281 VPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCL 340
+PL G DE L + ++E +QP+ ++ G D+ D L ++ +G+
Sbjct: 198 LPLPPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARGYG--- 254
Query: 341 RFLRSFNVPLMVLGGGGYTI 360
R L VL GG Y+I
Sbjct: 255 RITELIKPDLAVLEGG-YSI 273
>WB|WBGene00001838 [details] [associations]
symbol:hda-10 species:6239 "Caenorhabditis elegans"
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
"histone deacetylase activity" evidence=ISS] Pfam:PF00850
INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
Length = 517
Score = 231 (86.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 74/260 (28%), Positives = 113/260 (43%)
Query: 112 AGPSDIRRFHTDEYVEFLASVSPES-SGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAG 170
A S+I HT YV+ + S + SF ED V + + +AG
Sbjct: 59 AEESEILAVHTKRYVDDVKSTETMTVEQQESFCTKY------EDIYVNSATWHRAKLAAG 112
Query: 171 GSIGAAVKLNRGDAD-IAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVD 229
SI + IA G HHA E GFC N++ + ++ ++VL VD
Sbjct: 113 ASIDLMTSVMAAKRPGIAFIRPPG-HHAMPDEGCGFCIFNNVAIAAKAAIQNGQKVLIVD 171
Query: 230 IDVHHGDGVEEAFYTTDR--VMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLND 285
DVH G+G +E V +S H++ G F+P ++ G +N+PLN
Sbjct: 172 YDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWP---NMPQTGIYHNYKNTINLPLNT 228
Query: 286 -GLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLR 344
GL D + LF II + +QPD +++ G D+ GD G ++ G A +R L
Sbjct: 229 IGLTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLI 288
Query: 345 SFNVPLMVLGGGGYTIRNVA 364
+P+ L GGY + +A
Sbjct: 289 DTGIPVAALLEGGYFLDALA 308
>TAIR|locus:2119201 [details] [associations]
symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
"tubulin deacetylase activity" evidence=IDA] [GO:0043014
"alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019252 "starch biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019760 "glucosinolate metabolic process" evidence=RCA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
Length = 423
Score = 225 (84.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 50/161 (31%), Positives = 83/161 (51%)
Query: 167 ASAGGS-IGAAVKLNRGDADIAVNWA----GGLHHAKKSEASGFCYVNDIVLGILELLKV 221
A AG + + + + +R D + +A G HHA GFC ++ + +
Sbjct: 169 AGAGMALVDSVIAASRNSVDPPIGFALIRPPG-HHAVPKGPMGFCVFGNVAIAARHAQRT 227
Query: 222 H--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYAL 279
H +R+ +D DVHHG+G +AF + +S H+ G + PGTG I D+G G+G+ L
Sbjct: 228 HGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQDGSY-PGTGKISDIGKGKGEGTTL 286
Query: 280 NVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADS 320
N+PL G D + R +F II + ++PD +++ G D+
Sbjct: 287 NLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDA 327
>UNIPROTKB|E2RSA8 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
Length = 668
Score = 229 (85.7 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 77/306 (25%), Positives = 137/306 (44%)
Query: 84 KPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFS 143
+P R+ A + GL +R P A +++ H+ EYV L +
Sbjct: 27 RPERLTAALRRLQQGGLEQRCLQLAPREASEAELGLVHSPEYVSLLRGTQALDT------ 80
Query: 144 RHLKRFNVGEDCPVFD-GLFGFCQASAGGSIGA--AVKLNRGDADIAVNWAGGLHHAKKS 200
+ L+ + D F F + + G ++ AV + +A+ G HH++++
Sbjct: 81 QELRALSGQYDAVYFHPSTFHCARLAVGAALQLVDAVLMGAVHNGLALVRPPG-HHSQRA 139
Query: 201 EASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF-- 256
A+GFC N++ + + H +R+L VD DVHHG G++ F V+ S+H++
Sbjct: 140 AANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEH 199
Query: 257 GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVV 313
G F+P VG G+G+ + +N+P N G+ + + F ++ V + P+ V+
Sbjct: 200 GRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEFDPELVL 259
Query: 314 LQCGADSLSGDRLGCFNLSVK--GH-ADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYE 370
+ G DS GD G + + GH L+ L V VL GG Y + ++++ C
Sbjct: 260 VSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGRV-CAVLEGG-YHLESLSQSVCMV 317
Query: 371 TAVAVG 376
+G
Sbjct: 318 VRALLG 323
>UNIPROTKB|H9KZJ3 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
Length = 615
Score = 225 (84.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 81/303 (26%), Positives = 141/303 (46%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPA---GPSDIRRFHTDEYVEFLASVSPESSGDPS 141
P R+ ++ + Y L R P PA +I H+ E++E A+ S ++ +
Sbjct: 30 PERLSASYEQLQCYHLVERCV---PVPAREGSEEEILLVHSSEHLE--AAKSTQTMNE-- 82
Query: 142 FSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGL------- 194
LKR + D F C A +GAA++L D+ ++ G+
Sbjct: 83 --EELKRISGNYDSFFFHPNTYHCARLA---VGAALQLV--DSVMSGKVCNGMALVRPPG 135
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH---RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HH++++ A+GFC N++ + E K+ +R+L VD DVHHG G + F V+
Sbjct: 136 HHSQRNAANGFCLFNNVAIAA-EYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYF 194
Query: 252 SFHKFG--DFFPGT--GHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEV 306
S+H++ +F+P VG G+GK + +N+P N G+ + + F ++ V
Sbjct: 195 SWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFE 254
Query: 307 YQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVAR 365
+ P+ V++ G DS GD G N + + A FL + L V+ GGY +++++
Sbjct: 255 FDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKLCVILEGGYHLKSLSE 314
Query: 366 CWC 368
C
Sbjct: 315 SVC 317
>UNIPROTKB|F1PSI9 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
Length = 319
Score = 214 (80.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 66/204 (32%), Positives = 94/204 (46%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 87 RTQTGGTIMAGKLAMERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 143
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
R VD+D H G+G E F RV + + +PG K A + K V
Sbjct: 144 ISRATIVDLDAHQGNGHERDFMGDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK-----V 195
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADC 339
L G +D+ + +QK ++ + PD VV G D L GDRLG ++S +G D
Sbjct: 196 ELEWGTEDDEYLDKVERNLQKALQEHLPDVVVYNAGTDILEGDRLGGLSISPQGIVKRDE 255
Query: 340 L--RFLRSFNVPLMVLGGGGYTIR 361
L R +R VP++++ GGY R
Sbjct: 256 LVFRVVRGRQVPILMVTSGGYQKR 279
>UNIPROTKB|A6ND61 [details] [associations]
symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225180 HOVERGEN:HBG057112 CTD:55869 KO:K11405
EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00642258
RefSeq:NP_001159920.1 ProteinModelPortal:A6ND61 SMR:A6ND61
STRING:A6ND61 Ensembl:ENST00000373559 UCSC:uc022byv.1
ArrayExpress:A6ND61 Bgee:A6ND61 Uniprot:A6ND61
Length = 139
Score = 161 (61.7 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 40/89 (44%), Positives = 51/89 (57%)
Query: 191 AGGLHHAKKSEASGFCYVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMT 250
A LH + EASGFCY+ND VLGIL L + R+LYVD+D+HHGDG T D V
Sbjct: 47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG------TGD-VSD 99
Query: 251 VSFHKFGDFFPGTGHIKDVGAGQGKFYAL 279
V K G ++ I+D G K+Y +
Sbjct: 100 VGLGK-GRYYSVNVPIQD-GIQDEKYYQI 126
Score = 109 (43.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 246 DRVMTVSFH-KFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESF 292
+R++ V GD GTG + DVG G+G++Y++NVP+ DG+ DE +
Sbjct: 79 ERILYVDLDLHHGD---GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY 123
Score = 61 (26.5 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 22/62 (35%), Positives = 27/62 (43%)
Query: 44 MEEPTEGASLVSGPDGKKRRVSYFYEPTIGDYYYGQGHPMK-PHRIRMAHNLIVHYGLHR 102
MEEP E A G+ Y Y P +Y K P R M H+LI Y LH+
Sbjct: 1 MEEPEEPAD-----SGQSLVPVYIYSP---EYVSMCDSLAKIPKRASMVHSLIEAYALHK 52
Query: 103 RM 104
+M
Sbjct: 53 QM 54
>TAIR|locus:2098105 [details] [associations]
symbol:hda10 "histone deacetylase 10" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 KO:K06067 EMBL:AL138652 IPI:IPI00526042
PIR:T47441 RefSeq:NP_190052.1 UniGene:At.53729 HSSP:Q9BY41
ProteinModelPortal:Q9M1N8 SMR:Q9M1N8 EnsemblPlants:AT3G44660.1
GeneID:823592 KEGG:ath:AT3G44660 TAIR:At3g44660
HOGENOM:HOG000112868 InParanoid:Q9M1N8 OMA:WQLERTK PhylomeDB:Q9M1N8
ProtClustDB:CLSN2684485 Genevestigator:Q9M1N8 Uniprot:Q9M1N8
Length = 142
Score = 199 (75.1 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 37/85 (43%), Positives = 52/85 (61%)
Query: 356 GGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNMENLNAHKDME 415
GGYT NVARCW ET + + E N++P N+Y +YF PD++L + ++ENLN +
Sbjct: 14 GGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYIS 73
Query: 416 KIRNTLLEQLSGLIHAPSVPFQTTP 440
I+ +LE L + HAPSV Q P
Sbjct: 74 SIKVQILENLRYIQHAPSVQMQEVP 98
>UNIPROTKB|Q48DS3 [details] [associations]
symbol:PSPPH_4352 "Histone deacetylase family protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
ProtClustDB:CLSK909647 Uniprot:Q48DS3
Length = 305
Score = 210 (79.0 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 73/234 (31%), Positives = 110/234 (47%)
Query: 139 DPSF-SRHLKRFNVGED-----CPVFDGLFGFCQASAGGSIGAAVK-LNRGDADIAVNWA 191
DPS+ SR+L ED P + L ++ GGS+ A + L G +A + A
Sbjct: 60 DPSYISRYLNGDLSREDQRRLGLPWSEALARRTVSAVGGSLLTAEQALKHG---MACHLA 116
Query: 192 GGLHHAKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVM 249
GG HHA +GFC ND+ + LL+ R +VL D DVH GDG T+ +
Sbjct: 117 GGTHHAHYDYPAGFCIFNDLAVISQYLLQSGRVDKVLIFDCDVHQGDGTARILADTEDAI 176
Query: 250 TVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQP 309
TVS H +F P D ++PL G+ D ++ + ++ ++ Y+P
Sbjct: 177 TVSLHCEKNF-PARKAQSD----------WDIPLPMGMGDANYLNVVDDLLNYLLPFYKP 225
Query: 310 DAVVLQCGADSLSGDRLGCFNLSVKGHAD----CLRFLRSFNVPLMVLGGGGYT 359
D V+ G D D LG L+ +G A+ LR S ++P+M + GGGY+
Sbjct: 226 DLVLYDAGVDVHKDDALGYLQLTDQGVANRDEAVLRHCLSRDIPVMGVIGGGYS 279
>UNIPROTKB|Q604Q2 [details] [associations]
symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
protein" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
PATRIC:22608838 Uniprot:Q604Q2
Length = 310
Score = 210 (79.0 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 70/265 (26%), Positives = 116/265 (43%)
Query: 66 YFYEPTIGDYYYGQGHPMKPHRIRMAHNLIV--HYGLHRRMEVNRPFPAGPSDIRRFHTD 123
Y P + G GHP R+ + + + RR+E R A S + H+
Sbjct: 5 YISHPVFLRHDTGPGHPEGSVRLAAIESALAAPEFRSLRRLEAPR---ADISRLELVHSR 61
Query: 124 EYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGD 183
++E + + P++ + + GE + C A IG + +
Sbjct: 62 RHIERVFASLPQTGHHFVDADTVVSPESGE--AALHAVGAVCLA-VDEVIGKRAR----N 114
Query: 184 ADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEA 241
A AV G HHA+ A GFC N+I + L H +R+ VD DVHHG+G + A
Sbjct: 115 AFCAVRPPG--HHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHHGNGTQAA 172
Query: 242 FYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQ 301
F +V+ VS H++ ++PGTG ++ G G +N+PL G D ++R
Sbjct: 173 FRRNPQVLYVSTHQY-PWYPGTGSAEETGVGN----LVNIPLPAGTDSAAYREAVTATAL 227
Query: 302 KVMEVYQPDAVVLQCGADSLSGDRL 326
++ ++P+ V++ G D+ D L
Sbjct: 228 PAIDRFRPELVLISAGFDAHRDDPL 252
>UNIPROTKB|Q8EFZ9 [details] [associations]
symbol:SO_1815 "Histone deacetylase superfamily protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 207 (77.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 59/198 (29%), Positives = 95/198 (47%)
Query: 169 AGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELL---KVHRRV 225
AG S+ AA+ L G IA++ GG HHA SG+C ND+++ +L+ ++H+ +
Sbjct: 97 AGTSLTAALALQTG---IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHK-I 152
Query: 226 LYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLND 285
L D DVH GDG +++ S H D FP Q Y ++ L
Sbjct: 153 LIFDCDVHQGDGTATLSQLHQGIISCSIH-CKDNFPSRK--------QHSHY--DIELVK 201
Query: 286 GLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADC--LR 341
G DD ++ ++ ++ ++QPD ++ G D D LG +S +G D L
Sbjct: 202 GTDDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLS 261
Query: 342 FLRSFNVPLMVLGGGGYT 359
R+ N+P+ + GGGY+
Sbjct: 262 MARAANIPVAAVIGGGYS 279
>TIGR_CMR|SO_1815 [details] [associations]
symbol:SO_1815 "histone deacetylase/AcuC/AphA family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
Uniprot:Q8EFZ9
Length = 304
Score = 207 (77.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 59/198 (29%), Positives = 95/198 (47%)
Query: 169 AGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELL---KVHRRV 225
AG S+ AA+ L G IA++ GG HHA SG+C ND+++ +L+ ++H+ +
Sbjct: 97 AGTSLTAALALQTG---IALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLHK-I 152
Query: 226 LYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLND 285
L D DVH GDG +++ S H D FP Q Y ++ L
Sbjct: 153 LIFDCDVHQGDGTATLSQLHQGIISCSIH-CKDNFPSRK--------QHSHY--DIELVK 201
Query: 286 GLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADC--LR 341
G DD ++ ++ ++ ++QPD ++ G D D LG +S +G D L
Sbjct: 202 GTDDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVLS 261
Query: 342 FLRSFNVPLMVLGGGGYT 359
R+ N+P+ + GGGY+
Sbjct: 262 MARAANIPVAAVIGGGYS 279
>UNIPROTKB|E7ETT9 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
Uniprot:E7ETT9
Length = 319
Score = 208 (78.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 65/204 (31%), Positives = 93/204 (45%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 87 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 143
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
R +D+D H G+G E F RV + + +PG K A + K V
Sbjct: 144 ISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK-----V 195
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADC 339
L G +D+ + I+K ++ + PD VV G D L GDRLG ++S G D
Sbjct: 196 ELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDE 255
Query: 340 L--RFLRSFNVPLMVLGGGGYTIR 361
L R +R VP++++ GGY R
Sbjct: 256 LVFRMVRGRRVPILMVTSGGYQKR 279
>UNIPROTKB|Q9GKU5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
fascicularis" [GO:0000118 "histone deacetylase complex"
evidence=TAS] [GO:0004407 "histone deacetylase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0016568 "chromatin modification"
evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
Length = 347
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 65/204 (31%), Positives = 94/204 (46%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 115 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 171
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
R +D+D H G+G E F RV + + +PG K A + K V
Sbjct: 172 ISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK-----V 223
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADC 339
L G +D+ + I+K ++ + PD VV G D L GDRLG ++S G D
Sbjct: 224 ELEWGTEDDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDE 283
Query: 340 L--RFLRSFNVPLMVLGGGGYTIR 361
L R +R +VP++++ GGY R
Sbjct: 284 LVFRMVRGRHVPILMVTSGGYQKR 307
>MGI|MGI:2385252 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
[GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0032041
"NAD-dependent histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
Length = 347
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 62/204 (30%), Positives = 95/204 (46%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 115 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 171
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
R +D+D H G+G E F RV + + +PG K+ A + K V
Sbjct: 172 ISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYN-RHIYPGDRFAKE--AIRRK-----V 223
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLS----VKGHA 337
L G +DE + +++ ++ + PD VV G D L GDRLG ++S VK
Sbjct: 224 ELEWGTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDE 283
Query: 338 DCLRFLRSFNVPLMVLGGGGYTIR 361
R +R+ ++P++++ GGY R
Sbjct: 284 VVFRVVRAHDIPILMVTSGGYQKR 307
>RGD|1311706 [details] [associations]
symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
development" evidence=IMP] [GO:0016575 "histone deacetylation"
evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
Genevestigator:B2GUW3 Uniprot:B2GUW3
Length = 347
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 62/204 (30%), Positives = 95/204 (46%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 115 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 171
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
R +D+D H G+G E F RV + + +PG K+ A + K V
Sbjct: 172 ISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYN-RHIYPGDRFAKE--AIRRK-----V 223
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLS----VKGHA 337
L G +DE + +++ ++ + PD VV G D L GDRLG ++S VK
Sbjct: 224 ELEWGTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDE 283
Query: 338 DCLRFLRSFNVPLMVLGGGGYTIR 361
R +R+ ++P++++ GGY R
Sbjct: 284 VVFRVVRAHDIPILMVTSGGYQKR 307
>UNIPROTKB|F1MWS5 [details] [associations]
symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090050 "positive regulation of cell migration involved
in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
development" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005080 "protein kinase C
binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR017320
PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
Length = 895
Score = 218 (81.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 66/228 (28%), Positives = 113/228 (49%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLAS-------VS 133
HP RI+ + + GL + E + A +I+ H++ + + +
Sbjct: 654 HPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTNPLDGQKLD 713
Query: 134 PESS-GDPS--FSRHLKRFNVGEDCP-VFDGLF--GFCQASAGGSIGAAVKLNRGDAD-- 185
P + GD S F L +G D +++ L G + + G I A ++ G+
Sbjct: 714 PRTLLGDSSQKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASRVASGELKNG 773
Query: 186 IAVNWAGGLHHAKKSEASGFCYVNDIVLG---ILELLKVHRRVLYVDIDVHHGDGVEEAF 242
AV G HHA++S A GFC+ N + + + + L + + +L VD+DVHHG+G ++AF
Sbjct: 774 FAVVRPPG-HHAEESTAMGFCFFNSVAITAKYLRDQLNISK-ILIVDLDVHHGNGTQQAF 831
Query: 243 YTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD 288
Y ++ +S H++ G+FFPG+G +VG G G+ Y +N+ GLD
Sbjct: 832 YADPNILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 879
>UNIPROTKB|Q47YS1 [details] [associations]
symbol:CPS_3373 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 204 (76.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 77/273 (28%), Positives = 116/273 (42%)
Query: 93 NLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVG 152
N +V G+ +P P P +++ + Y+ L + +S ++R +G
Sbjct: 32 NALVANGVPNNW-FKKPTPVNPDNVKTVYDPTYIHQLINNQLDSKA-------MRR--IG 81
Query: 153 EDCPVFDGLFGFCQASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDI 211
P L + GG+I A + L G + +N GG HHA + SGFC +ND+
Sbjct: 82 --FPWSQQLIERTLTAVGGTIMTAQLALEYGKS---LNLTGGYHHAFANFGSGFCMINDL 136
Query: 212 VLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDV 269
L L +L+ +VL D DVH GDG + V TVS H +F P H K V
Sbjct: 137 YLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVSIHGEKNF-P---HRKQV 192
Query: 270 GAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF 329
L+ L G D + + K ++PDAV+ G D D LG
Sbjct: 193 SN-------LDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHL 245
Query: 330 NLSVKG--HADCLRF--LRSFNVPLMVLGGGGY 358
++S +G D L F + +P+ + GGGY
Sbjct: 246 DISTQGVLARDKLVFDYCKLKGIPIAAVIGGGY 278
>TIGR_CMR|CPS_3373 [details] [associations]
symbol:CPS_3373 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
Length = 300
Score = 204 (76.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 77/273 (28%), Positives = 116/273 (42%)
Query: 93 NLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSRHLKRFNVG 152
N +V G+ +P P P +++ + Y+ L + +S ++R +G
Sbjct: 32 NALVANGVPNNW-FKKPTPVNPDNVKTVYDPTYIHQLINNQLDSKA-------MRR--IG 81
Query: 153 EDCPVFDGLFGFCQASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDI 211
P L + GG+I A + L G + +N GG HHA + SGFC +ND+
Sbjct: 82 --FPWSQQLIERTLTAVGGTIMTAQLALEYGKS---LNLTGGYHHAFANFGSGFCMINDL 136
Query: 212 VLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDV 269
L L +L+ +VL D DVH GDG + V TVS H +F P H K V
Sbjct: 137 YLAALTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVSIHGEKNF-P---HRKQV 192
Query: 270 GAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCF 329
L+ L G D + + K ++PDAV+ G D D LG
Sbjct: 193 SN-------LDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHL 245
Query: 330 NLSVKG--HADCLRF--LRSFNVPLMVLGGGGY 358
++S +G D L F + +P+ + GGGY
Sbjct: 246 DISTQGVLARDKLVFDYCKLKGIPIAAVIGGGY 278
>UNIPROTKB|Q96DB2 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
activity (H3-K14 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
"chromatin modification" evidence=TAS] [GO:0004407 "histone
deacetylase activity" evidence=IDA] [GO:0016575 "histone
deacetylation" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
Length = 347
Score = 208 (78.3 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 65/204 (31%), Positives = 93/204 (45%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 115 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 171
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
R +D+D H G+G E F RV + + +PG K A + K V
Sbjct: 172 ISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK-----V 223
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADC 339
L G +D+ + I+K ++ + PD VV G D L GDRLG ++S G D
Sbjct: 224 ELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDE 283
Query: 340 L--RFLRSFNVPLMVLGGGGYTIR 361
L R +R VP++++ GGY R
Sbjct: 284 LVFRMVRGRRVPILMVTSGGYQKR 307
>UNIPROTKB|E5RJ04 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00964796 ProteinModelPortal:E5RJ04 SMR:E5RJ04
Ensembl:ENST00000523240 ArrayExpress:E5RJ04 Bgee:E5RJ04
Uniprot:E5RJ04
Length = 65
Score = 190 (71.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 31/67 (46%), Positives = 52/67 (77%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSF 142
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + +
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSE--Y 58
Query: 143 SRHLKRF 149
S+ ++RF
Sbjct: 59 SKQMQRF 65
>MGI|MGI:2158340 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0004407 "histone
deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
(H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
"histone deacetylase activity (H3-K9 specific)" evidence=IEA]
[GO:0033558 "protein deacetylase activity" evidence=ISO]
[GO:0034739 "histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
Length = 666
Score = 213 (80.0 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 76/303 (25%), Positives = 135/303 (44%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSR 144
P R+ A + + GL R A ++ H+ EY+ A V + D
Sbjct: 28 PERLTAALDGLRQRGLEERCLCLSACEASEEELGLVHSPEYI---ALVQKTQTLDKEELH 84
Query: 145 HL-KRFNVGEDCPVFDGLFGFCQASAGGSIGA--AVKLNRGDADIAVNWAGGLHHAKKSE 201
L K++N P D F + +AG ++ AV +A+ G HH++++
Sbjct: 85 ALSKQYNAVYFHP--D-TFHCARLAAGAALQLVDAVLTGAVHNGLALVRPPG-HHSQRAA 140
Query: 202 ASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--G 257
A+GFC N++ L + + +R+L VD DVHHG G++ F V+ S+H++ G
Sbjct: 141 ANGFCVFNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHG 200
Query: 258 DFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVVL 314
F+P VG GQG+ + +N+P N G+ + + F ++ + + P+ V++
Sbjct: 201 SFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLV 260
Query: 315 QCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETAV 373
G DS GD G + + A + L+ + + GGY + ++A+ C
Sbjct: 261 SAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQT 320
Query: 374 AVG 376
+G
Sbjct: 321 LLG 323
>UNIPROTKB|Q0VD49 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
[GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016575 "histone
deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
Length = 670
Score = 213 (80.0 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 81/324 (25%), Positives = 141/324 (43%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSR 144
P R+ A + +GL +R A +++ H+ EYV L ++ G +R
Sbjct: 28 PERLTTALERLQQHGLKQRCLQLVAREASEAELGLVHSPEYVALLQGT--QALG----TR 81
Query: 145 HLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGL-------HHA 197
L+ + D C A +GAA++L DA + GL HH+
Sbjct: 82 ELQALSKEYDAVYLHPSTFHCARLA---VGAALQLV--DAVLTGAVRNGLALVRPPGHHS 136
Query: 198 KKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHK 255
+++ A+GFC N++ + + H RR+L VD DVHHG G++ F V+ S+H+
Sbjct: 137 QRATANGFCVFNNVAIAAKHAQQKHGLRRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHR 196
Query: 256 F--GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPD 310
+ G F+P VG G+G + +N+P N G+ + + F ++ + + P+
Sbjct: 197 YEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAAFLHVLLPLAFEFDPE 256
Query: 311 AVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCY 369
V++ G DS GD G + + A L+ + + GGY + ++++ C
Sbjct: 257 LVLVSAGFDSAIGDPEGQMLATPECFAHLTHLLQVLAGGRVCAVLEGGYHLESLSQSVCM 316
Query: 370 ETAVAVGVEPDNKLPYNEYYEYFG 393
+G D LP + E G
Sbjct: 317 MVRALLG---DPALPLSGPMEPHG 337
>UNIPROTKB|E2RS82 [details] [associations]
symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
Length = 550
Score = 211 (79.3 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 55/192 (28%), Positives = 96/192 (50%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HH++++ A+GFC N++ + + H +R+L VD DVHHG G++ F V+ S
Sbjct: 16 HHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFS 75
Query: 253 FHKF--GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVY 307
+H++ G F+P VG G+G+ + +N+P N G+ + + F ++ V +
Sbjct: 76 WHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEF 135
Query: 308 QPDAVVLQCGADSLSGDRLGCFNLSVK--GH-ADCLRFLRSFNVPLMVLGGGGYTIRNVA 364
P+ V++ G DS GD G + + GH L+ L V VL GG Y + +++
Sbjct: 136 DPELVLVSAGFDSAIGDPEGQMQATPECFGHLTQLLQVLAGGRV-CAVLEGG-YHLESLS 193
Query: 365 RCWCYETAVAVG 376
+ C +G
Sbjct: 194 QSVCMVVRALLG 205
>UNIPROTKB|F1SPG6 [details] [associations]
symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00390000003411 EMBL:CU928273
Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
Length = 382
Score = 207 (77.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 58/182 (31%), Positives = 85/182 (46%)
Query: 187 AVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKVHRRVLYVDIDVHHGDGVEEAFY 243
A+N GG HH GFC DI L I E ++ R +D+D H G+G E F
Sbjct: 133 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 192
Query: 244 TTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKV 303
RV + + +PG K A + K V L +D+ + ++K
Sbjct: 193 GDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK-----VELEWATEDDEYLTKVERNLEKA 244
Query: 304 MEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADCL--RFLRSFNVPLMVLGGGGYT 359
++ ++PD VV G D L GDRLG ++S +G D L R +RS VP++++ GGY
Sbjct: 245 LQEHRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVRSLQVPILMVTSGGYQ 304
Query: 360 IR 361
R
Sbjct: 305 KR 306
>UNIPROTKB|Q4KAJ1 [details] [associations]
symbol:aphA_1 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
Uniprot:Q4KAJ1
Length = 342
Score = 205 (77.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 56/221 (25%), Positives = 102/221 (46%)
Query: 149 FNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRG-DADIAVNWAGGLHHAKKSEASGFCY 207
F + P+ + + SA ++ A ++ G D+ A+ G HHA + G+CY
Sbjct: 112 FAMDAGSPITATTWDAVRTSADIALTALALIDEGQDSAFALCRPPG-HHAAREYMGGYCY 170
Query: 208 VNDIVLGILELL-KVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD---FFPG- 262
+N+ + + + RRV +D+D HHG+G + FY V+ VS H GD +P
Sbjct: 171 LNNAAIAAQHAITRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSLH--GDPAVSYPYF 228
Query: 263 TGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLS 322
+GH + G+G G+ LN+PL + +R + K + + P+ +V+ G D+
Sbjct: 229 SGHASERGSGAGEGCNLNLPLPKNTSWQHYRQALE-LACKQLRAFAPELLVVSLGVDTFK 287
Query: 323 GDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNV 363
D + F L + + + + P + + GGY + +
Sbjct: 288 DDPISHFLLESEDFLGMGQIIATVGTPTLFVMEGGYMVDEI 328
>UNIPROTKB|H0YH91 [details] [associations]
symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
Length = 384
Score = 200 (75.5 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 46/138 (33%), Positives = 73/138 (52%)
Query: 231 DVHHGDGVEEAFYTTDRVMTVSFHKF--GDFFPGTGHIKDVGAGQGKFYALNVPLNDGLD 288
DVHHG+G ++ FY V+ +S H+ G+FFPG+G + +VGAG G+ + +NV GLD
Sbjct: 139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLD 198
Query: 289 ----DESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDR--LGCFNLSVKGHADCLRF 342
D + FR ++ + + PD V++ G D+ G LG +++S K C +
Sbjct: 199 PPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAK----CFGY 254
Query: 343 LRSFNVPLMVLGGGGYTI 360
+ LM L GG +
Sbjct: 255 MTQ---QLMNLAGGAVVL 269
Score = 44 (20.5 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 81 HPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPES 136
HP RI+ + + GL + E R A +++ H++ +V L +P S
Sbjct: 21 HPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNPLS 75
>UNIPROTKB|F1MWX4 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
"histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
Length = 386
Score = 203 (76.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 65/203 (32%), Positives = 93/203 (45%)
Query: 166 QASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELL-KVH-- 222
+ GG+I A KL D A+N GG HH GFC DI L I L +V
Sbjct: 114 RTQTGGTIMAG-KL-AVDRGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGI 171
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVP 282
+ VD+D H G+G E F RV + + +PG K A + K V
Sbjct: 172 SKATIVDLDAHQGNGHERDFMGDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK-----VE 223
Query: 283 LNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADCL 340
L G +D+ + ++K ++ ++PD VV G D L GDRLG +S +G D L
Sbjct: 224 LEWGTEDDEYLQKVERNLEKALQEHRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDEL 283
Query: 341 --RFLRSFNVPLMVLGGGGYTIR 361
R +R +P++++ GGY R
Sbjct: 284 VFRIVRGRQLPILMVTSGGYQKR 306
>RGD|1305874 [details] [associations]
symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
evidence=ISO] [GO:0014003 "oligodendrocyte development"
evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
"protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
"NAD-dependent histone deacetylase activity (H3-K18 specific)"
evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
Length = 588
Score = 207 (77.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 71/282 (25%), Positives = 125/282 (44%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFSR 144
P R+ A + + GL R + A ++ H+ EY+ A V + D
Sbjct: 28 PERLTAALDGLRQRGLEERCQCLSVCEASEEELGLVHSPEYI---ALVQKTQTLD---KE 81
Query: 145 HLKRFNVGEDCPVFD-GLFGFCQASAGGSIGA--AVKLNRGDADIAVNWAGGLHHAKKSE 201
L + D F F + +AG ++ AV +A+ G HH++++
Sbjct: 82 ELHTLSKQYDAVYFHPDTFHCARLAAGAALRLVDAVLTGAVHNGVALVRPPG-HHSQRAA 140
Query: 202 ASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF--G 257
A+GFC N++ + + + +R+L VD DVHHG G++ F V+ S+H++ G
Sbjct: 141 ANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHG 200
Query: 258 DFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVVL 314
+F+P VG G+G+ + +N+P N G+ + + F ++ + + P+ V++
Sbjct: 201 NFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLV 260
Query: 315 QCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
G DS GD G ++ +C L L VL GG
Sbjct: 261 SAGFDSAIGDPEG----QMQATPECFAHLTQL---LQVLAGG 295
>UNIPROTKB|Q4K5L2 [details] [associations]
symbol:PFL_5403 "Histone deacetylase family protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
KEGG:pfl:PFL_5403 PATRIC:19880291
BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
Length = 306
Score = 198 (74.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 63/199 (31%), Positives = 93/199 (46%)
Query: 168 SAGGSIGAAVK-LNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR--R 224
+ GGS+ AA + L G +A + AGG HHA +GFC ND+ + LL+ R R
Sbjct: 95 AVGGSLLAAEQALEHG---LACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGR 151
Query: 225 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLN 284
VL D DVH GDG T +TVS H +F P D ++PL
Sbjct: 152 VLIFDCDVHQGDGTARILQHTADAVTVSLHCEKNF-PARKAQSD----------WDIPLP 200
Query: 285 DGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHAD----CL 340
G+ D + + + ++ +YQPD V+ G D D LG L+ G A+ +
Sbjct: 201 MGMGDADYLNVVDDTLNYLLPLYQPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVM 260
Query: 341 RFLRSFNVPLMVLGGGGYT 359
R ++P++ + GGGY+
Sbjct: 261 RHCLGRDIPVVGVIGGGYS 279
Score = 152 (58.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 76/242 (31%), Positives = 109/242 (45%)
Query: 82 PMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF-HTDEYVEFLASVSPESSGDP 140
PM R+ H +V GL R ++ RP P++I H Y+E S G+
Sbjct: 22 PMDKFRLLRDH--LVDSGLTRDADLLRP-ELCPAEILALAHDPAYIERYMS------GE- 71
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK-LNRGDADIAVNWAGGLHHAKK 199
SR +R +G P + L + GGS+ AA + L G +A + AGG HHA
Sbjct: 72 -LSREDQR-RLG--LPWSEALARRTVRAVGGSLLAAEQALEHG---LACHLAGGTHHAHY 124
Query: 200 SEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFG 257
+GFC ND+ + LL+ R RVL D DVH GDG T +TVS H
Sbjct: 125 DYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDGTARILQHTADAVTVSLHCEK 184
Query: 258 DFFPGTGHIKD----VGAGQGKFYALNVPLNDGLDDESFRGLFRP---IIQKVMEVYQPD 310
+F P D + G G LNV ++D L+ L++P + ++V+Q D
Sbjct: 185 NF-PARKAQSDWDIPLPMGMGDADYLNV-VDDTLN--YLLPLYQPDLVLYDAGVDVHQDD 240
Query: 311 AV 312
A+
Sbjct: 241 AL 242
>UNIPROTKB|Q969S8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
"NAD-dependent histone deacetylase activity (H4-K16 specific)"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0014003
"oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
"histone deacetylase activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0033558 "protein deacetylase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
Ensembl:ENST00000216271 Ensembl:ENST00000349505
Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
Uniprot:Q969S8
Length = 669
Score = 207 (77.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 74/304 (24%), Positives = 127/304 (41%)
Query: 84 KPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFS 143
+P R+ A + + GL +R A ++ H+ EYV + + G
Sbjct: 27 RPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRET--QVLGKEELQ 84
Query: 144 RHLKRFNVGEDCPVFDGLFGFCQ---ASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKS 200
+F D F C A AG + AV +A+ G HH +++
Sbjct: 85 ALSGQF----DAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRA 139
Query: 201 EASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF-- 256
A+GFC N++ + + H R+L VD DVHHG G++ F V+ S+H++
Sbjct: 140 AANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEH 199
Query: 257 GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQPDAVV 313
G F+P VG GQG + +N+P N G+ + + F ++ + + P+ V+
Sbjct: 200 GRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVL 259
Query: 314 LQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCWCYETA 372
+ G DS GD G + + A + L+ + + GGY + ++A C
Sbjct: 260 VSAGFDSAIGDPEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQ 319
Query: 373 VAVG 376
+G
Sbjct: 320 TLLG 323
>TAIR|locus:2180657 [details] [associations]
symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
Uniprot:Q944K3
Length = 387
Score = 201 (75.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 80/312 (25%), Positives = 128/312 (41%)
Query: 63 RVSYFYEPTIGDYYYG--QGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRF 120
+VS Y + + G + HP + +V G + P A D+
Sbjct: 73 KVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLLVV 132
Query: 121 HTDEYVEFL-ASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKL 179
H++ Y+ L +S + + + F V + L+ F + GG+I AA KL
Sbjct: 133 HSENYLNSLKSSATVARITEVAPVAFFPNFLVQQKV-----LYPF-RKQVGGTILAA-KL 185
Query: 180 NRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI-LELLKVH-RRVLYVDIDVHHGDG 237
+ A+N GG HH GFC DI L I L++ RV+ +D+D H G+G
Sbjct: 186 AT-ERGWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNG 244
Query: 238 VEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFR 297
E +RV + + + +P D A +F V + G + +
Sbjct: 245 HETDLGDDNRVYILDMYN-PEIYPF-----DYRAR--RFIDQKVEVMSGTTTDEYLRKLD 296
Query: 298 PIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHAD----CLRFLRSFNVPLMVL 353
++ +QP+ V+ G D L GD LG +S G RF R N+PL++L
Sbjct: 297 EALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVML 356
Query: 354 GGGGYTIRNVAR 365
GGY +++ AR
Sbjct: 357 TSGGY-MKSSAR 367
>UNIPROTKB|Q4K3I0 [details] [associations]
symbol:aphA_3 "Acetylpolyamine aminohydrolase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
Uniprot:Q4K3I0
Length = 343
Score = 197 (74.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 51/212 (24%), Positives = 93/212 (43%)
Query: 156 PVFDGLFGFCQASAGGSIGAAVKLNRG-DADIAVNWAGGLHHAKKSEASGFCYVNDIVLG 214
P+ G + ++A ++ A + G + A+ G HHA G+CY+N+ +
Sbjct: 119 PITAGTWQAAYSAAQVALTAQAHIQNGAHSAFALCRPPG-HHAAGDLMGGYCYLNNAAIA 177
Query: 215 ILELL-KVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDF-FPG-TGHIKDVGA 271
L + HR+V +D+D HHG+G + FY V+ S H + FP G+ + G
Sbjct: 178 AQAFLDQGHRKVAILDVDYHHGNGTQSIFYERSDVLFTSIHGHPEAEFPFFLGYADECGE 237
Query: 272 GQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNL 331
G G+ + N PL G +++ ++ Y D +V+ G D+ D + F L
Sbjct: 238 GAGEGFNFNYPLAAGSGWDAWSAALEQACNEIQR-YDADIIVVSLGVDTFKDDPISQFKL 296
Query: 332 SVKGHADCLRFLRSFNVPLMVLGGGGYTIRNV 363
+ + + + P + + GGY + +
Sbjct: 297 DSPDYLAMGKRIAALGKPTLFVMEGGYAVEEI 328
Score = 38 (18.4 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 101 HRRM-EVNRPFPAGPSDIRRFHTDEYVEF 128
H+ + V P G I R H+ Y++F
Sbjct: 42 HQNLGPVEAPKDFGLEPIERIHSRAYLDF 70
>UNIPROTKB|E5RFI6 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976946 ProteinModelPortal:E5RFI6 SMR:E5RFI6
Ensembl:ENST00000520895 ArrayExpress:E5RFI6 Bgee:E5RFI6
Uniprot:E5RFI6
Length = 60
Score = 179 (68.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 29/59 (49%), Positives = 46/59 (77%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPS 141
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P++ + S
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYS 59
>TIGR_CMR|SPO_0250 [details] [associations]
symbol:SPO_0250 "histone deacetylase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
Uniprot:Q5LX39
Length = 308
Score = 190 (71.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 67/263 (25%), Positives = 108/263 (41%)
Query: 80 GHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD 139
GHP + R+ + + L R V P A D+ R H YV + P D
Sbjct: 19 GHPERVARLEHVLHALEPLDLRR---VTAPL-AAEDDLLRIHPAGYVADIRDARP----D 70
Query: 140 PSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDAD---IAVNWAGGLHH 196
F++ + D + G +AG + A + G+A A+ G HH
Sbjct: 71 EGFAQ------IDGDTFLSPGSVDAAFRAAGAVVRAVDMVLGGEAQNAFCAIRPPG--HH 122
Query: 197 AKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH 254
A++ A GFC + L L H RRV VD DVHHG+G ++ + R + ++
Sbjct: 123 AERETAMGFCLFGNAALAAKHALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQ 182
Query: 255 KFGDFFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVL 314
+ +PG+G + GA G+ +N+PL G R + + ++P+ +++
Sbjct: 183 QM-PLWPGSGRPDEDGA-HGQI--VNIPLAPGTGGAEMRAAYMAQAFPRLRAFKPELIII 238
Query: 315 QCGADSLSGDRLGCFNLSVKGHA 337
G D+ D L N S A
Sbjct: 239 SAGFDAHQDDPLANLNWSTADFA 261
>UNIPROTKB|E5RK19 [details] [associations]
symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005657
"replication fork" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009913 "epidermal cell
differentiation" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
formation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
"regulation of protein deacetylation" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
IPI:IPI00976604 ProteinModelPortal:E5RK19 SMR:E5RK19
Ensembl:ENST00000524334 ArrayExpress:E5RK19 Bgee:E5RK19
Uniprot:E5RK19
Length = 52
Score = 174 (66.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 28/52 (53%), Positives = 42/52 (80%)
Query: 83 MKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSP 134
MKPHRIRM HNL+++YGL+R+ME+ RP A ++ ++H+DEY++FL S+ P
Sbjct: 1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRP 52
>UNIPROTKB|F1RXT2 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
Length = 677
Score = 197 (74.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 75/309 (24%), Positives = 131/309 (42%)
Query: 84 KPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD-PSF 142
+P R+ A + GL +R A +++ H+ EYV L S+ + +
Sbjct: 27 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQAL 86
Query: 143 SRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGL-------H 195
SR D F C A G AA++L DA +A GL H
Sbjct: 87 SRQF-------DAVYFHPSTFHCARLAAG---AALQLV--DAVMAGVVRNGLALVRPPGH 134
Query: 196 HAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
H++++ A+GFC N + + + H R+L VD D+HHG G + F V+ S+
Sbjct: 135 HSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSW 194
Query: 254 HKF--GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQ 308
H++ G F+P VG G+G + +N+P N G+ + + F ++ + +
Sbjct: 195 HRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFN 254
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCW 367
+ V++ G DS GD G + + A + L+ + + GGY + ++++
Sbjct: 255 AELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSV 314
Query: 368 CYETAVAVG 376
C +G
Sbjct: 315 CMMVQALLG 323
>UNIPROTKB|I3LDD6 [details] [associations]
symbol:LOC100518786 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
GeneTree:ENSGT00530000062809 EMBL:BX321913
Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
Length = 677
Score = 197 (74.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 75/309 (24%), Positives = 131/309 (42%)
Query: 84 KPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGD-PSF 142
+P R+ A + GL +R A +++ H+ EYV L S+ + +
Sbjct: 29 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLRGTQALSTEELQAL 88
Query: 143 SRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGL-------H 195
SR D F C A G AA++L DA +A GL H
Sbjct: 89 SRQF-------DAVYFHPSTFHCARLAAG---AALQLV--DAVMAGVVRNGLALVRPPGH 136
Query: 196 HAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSF 253
H++++ A+GFC N + + + H R+L VD D+HHG G + F V+ S+
Sbjct: 137 HSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSW 196
Query: 254 HKF--GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKVMEVYQ 308
H++ G F+P VG G+G + +N+P N G+ + + F ++ + +
Sbjct: 197 HRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFN 256
Query: 309 PDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSF-NVPLMVLGGGGYTIRNVARCW 367
+ V++ G DS GD G + + A + L+ + + GGY + ++++
Sbjct: 257 AELVLVSAGFDSAIGDSEGQMQATPECFAHLTQLLQVLAGGRVCAVLEGGYHLESLSQSV 316
Query: 368 CYETAVAVG 376
C +G
Sbjct: 317 CMMVQALLG 325
>FB|FBgn0051119 [details] [associations]
symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
melanogaster" [GO:0004407 "histone deacetylase activity"
evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
[GO:0000118 "histone deacetylase complex" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
Length = 343
Score = 190 (71.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 68/199 (34%), Positives = 93/199 (46%)
Query: 169 AGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH----RR 224
A GSI A KL D A+N GG HH GFC DI L I+ L + RR
Sbjct: 134 AAGSILAG-KLAL-DYGWAINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRR 191
Query: 225 VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNVPLN 284
++ VD+D H G+G E F V F + F H+ A + A V L
Sbjct: 192 IMIVDLDAHQGNGHERDFNNVAAVYI--FDMYNAFVYPRDHV----AKESIRCA--VELR 243
Query: 285 DGLDDESF-RGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADCLR 341
+ +D + R L R ++Q + E ++PD VV G D L GD LG +S +G D L
Sbjct: 244 NYTEDGFYLRQLKRCLMQSLAE-FRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLV 302
Query: 342 F--LRSFNVPLMVLGGGGY 358
F R+ +P+++L GGY
Sbjct: 303 FSTFRALGIPVVMLLSGGY 321
>UNIPROTKB|F1NYW6 [details] [associations]
symbol:HDAC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0004407 "histone deacetylase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
Uniprot:F1NYW6
Length = 357
Score = 190 (71.9 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 59/204 (28%), Positives = 91/204 (44%)
Query: 166 QASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKVH 222
+ GG+I A KL D A+N GG HH + GFC DI L I E +
Sbjct: 114 RTQTGGTIMAG-KL-AVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGV 171
Query: 223 RRVLYVDIDVHHGDGVEEAFYTTDRVMTV-SFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
+ +D+D H G+G E F RV + +++++ +PG G K + V
Sbjct: 172 SKATIIDLDAHQGNGHERDFMNDHRVYIMDAYNRY--IYPGDGFAK-------RAIKRKV 222
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HADC 339
L G +D + ++ + +PD +V G D L GD LG +S +G D
Sbjct: 223 ELEWGTEDTEYLQKVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDE 282
Query: 340 LRF--LRSFNVPLMVLGGGGYTIR 361
+ F RS +P++++ GGY R
Sbjct: 283 VVFKAARSRGIPILMVTSGGYQKR 306
>UNIPROTKB|I3LTU6 [details] [associations]
symbol:LOC100738481 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 EMBL:FP700091
Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
Length = 275
Score = 176 (67.0 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 52/171 (30%), Positives = 77/171 (45%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 114 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 170
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
R +D+D H G+G E F RV + + +PG K A + K V
Sbjct: 171 ISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK-----V 222
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLS 332
L +D+ + ++K ++ ++PD VV G D L GDRLG ++S
Sbjct: 223 ELEWATEDDEYLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSIS 273
>ZFIN|ZDB-GENE-040704-7 [details] [associations]
symbol:hdac11 "histone deacetylase 11" species:7955
"Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
Length = 366
Score = 178 (67.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 57/208 (27%), Positives = 90/208 (43%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + ++RG A+N GG HH + GFC DI L I E ++
Sbjct: 126 RTQTGGTIMAGKLAIDRG---WAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEG 182
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKFYALNV 281
+D+D H G+G E F RV + + +PG G+ K + V
Sbjct: 183 VASATIIDLDAHQGNGHERDFLEDRRVYIMDVYN-RHIYPGDGYAK-------RAIKRKV 234
Query: 282 PLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HAD- 338
L+ G +D + + + +PD ++ G D L GD LG +S +G D
Sbjct: 235 ELDWGTEDSEYLQKVDLHSEGALNEARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDE 294
Query: 339 -CLRFLRSFNVPLMVLGGGGYTIRNVAR 365
R R +P++++ GGY + AR
Sbjct: 295 IIFRAARRRGIPILMVTSGGYQ-KKTAR 321
>UNIPROTKB|I3L961 [details] [associations]
symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
Uniprot:I3L961
Length = 606
Score = 179 (68.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/170 (27%), Positives = 81/170 (47%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HH++++ A+GFC N + + + H R+L VD D+HHG G + F V+ S
Sbjct: 90 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 149
Query: 253 FHKF--GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLF-RPIIQKVMEV 306
+H++ G F+P VG G+G + +N+P N G+ + + F + ++ +
Sbjct: 150 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFE 209
Query: 307 YQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ + V++ G DS GD G ++ +C L L VL GG
Sbjct: 210 FNAELVLVSAGFDSAIGDSEG----QMQATPECFAHLTQL---LQVLAGG 252
>UNIPROTKB|I3LKB5 [details] [associations]
symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
Uniprot:I3LKB5
Length = 621
Score = 179 (68.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 47/170 (27%), Positives = 81/170 (47%)
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVS 252
HH++++ A+GFC N + + + H R+L VD D+HHG G + F V+ S
Sbjct: 104 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 163
Query: 253 FHKF--GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLF-RPIIQKVMEV 306
+H++ G F+P VG G+G + +N+P N G+ + + F + ++ +
Sbjct: 164 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFE 223
Query: 307 YQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGG 356
+ + V++ G DS GD G ++ +C L L VL GG
Sbjct: 224 FNAELVLVSAGFDSAIGDSEG----QMQATPECFAHLTQL---LQVLAGG 266
>UNIPROTKB|E7EUZ1 [details] [associations]
symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
Length = 296
Score = 171 (65.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 66/238 (27%), Positives = 104/238 (43%)
Query: 82 PMKPHRIRMAHNLIVHYGL-HRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDP 140
P P R+ ++ GL R + F A ++ H+ EY++ + + + G+
Sbjct: 51 PEGPERLHAIKEQLIQEGLLDRCVSFQARF-AEKEELMLVHSLEYIDLMETTQYMNEGE- 108
Query: 141 SFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADI----AVNWAGGLHH 196
R L + + + + C A GS+ V G A+I A+ G HH
Sbjct: 109 --LRVLA--DTYDSVYLHPNSYS-CACLASGSVLRLVDAVLG-AEIRNGMAIIRPPG-HH 161
Query: 197 AKKSEASGFCYVNDIVLGILELLKVHR--RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFH 254
A+ S G+C N + + + HR RVL VD DVHHG G + F V+ S H
Sbjct: 162 AQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIH 221
Query: 255 KF--GDFFPG--TGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLFRPIIQKV-MEV 306
++ G F+P + G GQG+ Y +NVP N G+ D + F ++ V +EV
Sbjct: 222 RYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEV 279
>UNIPROTKB|I3LHJ7 [details] [associations]
symbol:I3LHJ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
GO:GO:0004407 GeneTree:ENSGT00530000062889
Ensembl:ENSSSCT00000031343 Uniprot:I3LHJ7
Length = 51
Score = 154 (59.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 249 MTVSFHKFGD-FFPGTGHIKDVGAGQGKFYALNVPLNDGLDDESF 292
MTVS HKF FFPGTG + DVG G+G++Y++NVP+ DG+ DE +
Sbjct: 1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY 45
>DICTYBASE|DDB_G0280195 [details] [associations]
symbol:hdaC "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
activity (H4-K16 specific)" evidence=IEA] [GO:0046969
"NAD-dependent histone deacetylase activity (H3-K9 specific)"
evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
(H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
"histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
Length = 1704
Score = 176 (67.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 83/331 (25%), Positives = 145/331 (43%)
Query: 124 EYVEFLASVSPESSGDP-SFSRHLKRFNVGEDCPVFDGLFGF--CQAS--AGGSIGAAV- 177
E EF + + SG + + H K F G+D ++D +A+ A GS+ AAV
Sbjct: 1136 ENSEFETHLESDKSGAMVTVASH-KDFE-GDDDNIYDTFVSHRSIKAALRASGSVCAAVD 1193
Query: 178 KLNRGD---ADIAVNWAGGLHHA----KKSEA--SGFCYVNDIVLGI--LELLKVHRRVL 226
++R A A+ G HHA + S+A G+C +N++ +G L + R+
Sbjct: 1194 SVSRSGYTRAFCAIRPPG--HHAGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIA 1251
Query: 227 YVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD---FFPGTGH-IKDVGAGQGKFYALNVP 282
VD DVHHG+G +E D + +S H + F+PGTG + D+ G+F N+
Sbjct: 1252 VVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDG-NI- 1309
Query: 283 LNDGLDDESFRGLF-RPIIQKV---MEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHAD 338
LN GL + +F + + K+ +E Y+P + L G D D L+ + +
Sbjct: 1310 LNIGLKRNTGSAVFLQQWMNKIIPRLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFV 1369
Query: 339 CLRFLRS--FNV---PLMVLGGGGYTIRNVARCW-CYETAVAVGVEP-DNKLPY-NEYYE 390
+ +++ F ++ + GGY I C + + +E D ++ N Y
Sbjct: 1370 ITKMIKTVAFKYCKGRIISVLEGGYGIEKTNSLQRCVNSHLKALIEDTDEEIHLANISYG 1429
Query: 391 YFGPDYTLHVEPCNMENLNAHKDMEKIRNTL 421
+F + N+ N ++ + +N L
Sbjct: 1430 HFSETQETAIPKFNINNFISNPNKRGKKNNL 1460
>DICTYBASE|DDB_G0279267 [details] [associations]
symbol:hdaD "type-2 histone deacetylase"
species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
histone deacetylase activity (H3-K18 specific)" evidence=IEA]
[GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
"histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
histone deacetylase activity (H4-K16 specific)" evidence=IEA]
[GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
(H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
histone deacetylase activity (H3-K14 specific)" evidence=IEA]
[GO:0031078 "histone deacetylase activity (H3-K14 specific)"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
Length = 1489
Score = 117 (46.2 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 168 SAGGSIGAAVKLNRGD---ADIAVNWAGGLHHAKK------SEASGFCYVNDIVLGI-LE 217
SAG + A + +G+ A +A G HHA + + + GFC +N + +G
Sbjct: 1203 SAGATCQAIDNVMKGNVTSAFVAARPPG--HHAGRDGLTSGTSSQGFCLLNHVCIGAKYA 1260
Query: 218 LLKVHR-RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTG 264
LK + ++ +D DVHHG+G EE +S H F + F+PG+G
Sbjct: 1261 QLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEGFYPGSG 1309
Score = 94 (38.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 279 LNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHAD 338
+N+PL+ SF F II K+ + YQP+ +++ CG D+ D L L + + +
Sbjct: 1386 VNIPLDPKSSASSFLKAFSIIIDKLND-YQPELILISCGFDAHMEDHLASLCLLEENYVE 1444
Query: 339 CLRFLRSF-----NVPLMVLGGGGYTIRNVARC 366
R LR L+ + GGY I + +C
Sbjct: 1445 ITRSLRRVADRWCKGRLVSILEGGYNINALRQC 1477
Score = 59 (25.8 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 19/76 (25%), Positives = 30/76 (39%)
Query: 60 KKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR-RMEV-NRPFPAGPSDI 117
K+R+V Y T D+ HP P R+ I + R+ + N P I
Sbjct: 1057 KERKVMALYHTTCLDHLVPDDHPESPKRLSSVIKAINDFSRQSDRLIIKNDPEEINDKWI 1116
Query: 118 RRFHTDEYVEFLASVS 133
H+ EY+ L ++
Sbjct: 1117 LTVHSPEYLRLLEDLT 1132
>WB|WBGene00007953 [details] [associations]
symbol:hda-11 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0033558 "protein deacetylase activity" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 62/218 (28%), Positives = 91/218 (41%)
Query: 155 CPVFDGLFGFCQASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVL 213
C + L + AGG++ AA + L G A+N GG HHA S GFC+ DI +
Sbjct: 105 CIIESKLLHPLRLQAGGTVLAANLALKHG---WAINVGGGFHHASHSGGGGFCFYADITM 161
Query: 214 GILELL--KVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDF-FPGTGHIKDVG 270
I +L K + VD+D H G+G F V F F + +P H ++
Sbjct: 162 AIFDLFDKKAIANAIVVDLDAHQGNGHARDFADNPNVFV--FDVFNPYVYP---HDRE-- 214
Query: 271 AGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVM---EVYQP---DAVVLQCGADSLSGD 324
A Q F V +N D S+ R + + + E P D ++ G D L GD
Sbjct: 215 ARQ--FINRAVHVNGHTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGD 272
Query: 325 RLGCFNLS----VKGHADCLRFLRSFNVPLMVLGGGGY 358
LG LS + +S +P+ ++ GGY
Sbjct: 273 PLGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGY 310
>UNIPROTKB|Q18477 [details] [associations]
symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
NextBio:920378 Uniprot:Q18477
Length = 334
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 62/218 (28%), Positives = 91/218 (41%)
Query: 155 CPVFDGLFGFCQASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVL 213
C + L + AGG++ AA + L G A+N GG HHA S GFC+ DI +
Sbjct: 105 CIIESKLLHPLRLQAGGTVLAANLALKHG---WAINVGGGFHHASHSGGGGFCFYADITM 161
Query: 214 GILELL--KVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDF-FPGTGHIKDVG 270
I +L K + VD+D H G+G F V F F + +P H ++
Sbjct: 162 AIFDLFDKKAIANAIVVDLDAHQGNGHARDFADNPNVFV--FDVFNPYVYP---HDRE-- 214
Query: 271 AGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVM---EVYQP---DAVVLQCGADSLSGD 324
A Q F V +N D S+ R + + + E P D ++ G D L GD
Sbjct: 215 ARQ--FINRAVHVNGHTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGD 272
Query: 325 RLGCFNLS----VKGHADCLRFLRSFNVPLMVLGGGGY 358
LG LS + +S +P+ ++ GGY
Sbjct: 273 PLGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGY 310
>UNIPROTKB|Q484X2 [details] [associations]
symbol:CPS_1655 "Histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 159 (61.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 48/175 (27%), Positives = 82/175 (46%)
Query: 73 GDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSD---IRRFHTDEYVEFL 129
G++ G+ HP R+ + ++ GL V R F + P D + HT E+++F+
Sbjct: 12 GEHNMGEHHPENGKRLTAISDQLIRSGLDY---VVRQFDSKPIDKSLLALAHTQEHIDFV 68
Query: 130 ASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGD--ADIA 187
+P + G+ +F+ VGED + + SAG ++ A + G A
Sbjct: 69 FDNAP-NEGEENFT-------VGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFC 120
Query: 188 VNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEE 240
G HHA+ + GFC+ N++ + + + +RV VD DVHHG+G E+
Sbjct: 121 ATRPPG-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174
>TIGR_CMR|CPS_1655 [details] [associations]
symbol:CPS_1655 "histone deacetylase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
deacetylase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
Uniprot:Q484X2
Length = 317
Score = 159 (61.0 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 48/175 (27%), Positives = 82/175 (46%)
Query: 73 GDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSD---IRRFHTDEYVEFL 129
G++ G+ HP R+ + ++ GL V R F + P D + HT E+++F+
Sbjct: 12 GEHNMGEHHPENGKRLTAISDQLIRSGLDY---VVRQFDSKPIDKSLLALAHTQEHIDFV 68
Query: 130 ASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGD--ADIA 187
+P + G+ +F+ VGED + + SAG ++ A + G A
Sbjct: 69 FDNAP-NEGEENFT-------VGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFC 120
Query: 188 VNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEE 240
G HHA+ + GFC+ N++ + + + +RV VD DVHHG+G E+
Sbjct: 121 ATRPPG-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174
>UNIPROTKB|C9J8B8 [details] [associations]
symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
Length = 619
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 58/223 (26%), Positives = 94/223 (42%)
Query: 84 KPHRIRMAHNLIVHYGLHRRMEVNRPFPAGPSDIRRFHTDEYVEFLASVSPESSGDPSFS 143
+P R+ A + + GL +R A ++ H+ EYV + + G
Sbjct: 27 RPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVRET--QVLGKEELQ 84
Query: 144 RHLKRFNVGEDCPVFDGLFGFCQ---ASAGGSIGAAVKLNRGDADIAVNWAGGLHHAKKS 200
+F D F C A AG + AV +A+ G HH +++
Sbjct: 85 ALSGQF----DAIYFHPSTFHCARLAAGAGLQLVDAVLTGAVQNGLALVRPPG-HHGQRA 139
Query: 201 EASGFCYVNDIVLGILELLKVH--RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKF-- 256
A+GFC N++ + + H R+L VD DVHHG G++ F V+ S+H++
Sbjct: 140 AANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEH 199
Query: 257 GDFFP--GTGHIKDVGAGQGKFYALNVPLND-GLDDESFRGLF 296
G F+P VG GQG + +N+P N G+ + + F
Sbjct: 200 GRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF 242
>UNIPROTKB|B5MCQ6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
Length = 268
Score = 152 (58.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 207 YVNDIVLGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHI 266
Y+N++ + E ++ R +D+D H G+G E F RV + + +PG
Sbjct: 79 YLNELKF-LFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN-RHIYPGDRFA 136
Query: 267 KDVGAGQGKFYALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRL 326
K A + K V L G +D+ + I+K ++ + PD VV G D L GDRL
Sbjct: 137 KQ--AIRRK-----VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRL 189
Query: 327 GCFNLSVKG--HADCL--RFLRSFNVPLMVLGGGGYTIR 361
G ++S G D L R +R VP++++ GGY R
Sbjct: 190 GGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKR 228
>UNIPROTKB|E1BQQ2 [details] [associations]
symbol:Gga.27678 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
Length = 218
Score = 132 (51.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 52/192 (27%), Positives = 90/192 (46%)
Query: 85 PHRIRMAHNLIVHYGLHRRMEVNRPFPA---GPSDIRRFHTDEYVEFLASVSPESSGDPS 141
P R+ ++ + Y L R P PA +I H+ E++E A+ S ++ +
Sbjct: 30 PERLSASYEQLQCYHLVERCV---PVPAREGSEEEILLVHSSEHLE--AAKSTQTMNE-- 82
Query: 142 FSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAVNWAGGL------- 194
LKR + D F C A +GAA++L D+ ++ G+
Sbjct: 83 --EELKRISGNYDSFFFHPNTYHCARLA---VGAALQLV--DSVMSGKVCNGMALVRPPG 135
Query: 195 HHAKKSEASGFCYVNDIVLGILELLKVH---RRVLYVDIDVHHGDGVEEAFYTTDRVMTV 251
HH++++ A+GFC N++ + E K+ +R+L VD DVHHG G + F V+
Sbjct: 136 HHSQRNAANGFCLFNNVAIAA-EYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYF 194
Query: 252 SFHKFG--DFFP 261
S+H++ +F+P
Sbjct: 195 SWHRYEHQEFWP 206
>UNIPROTKB|F5H6R5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 IPI:IPI00790809
ProteinModelPortal:F5H6R5 SMR:F5H6R5 Ensembl:ENST00000446613
UCSC:uc011aux.2 ArrayExpress:F5H6R5 Bgee:F5H6R5 Uniprot:F5H6R5
Length = 155
Score = 113 (44.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 281 VPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HAD 338
V L G +D+ + I+K ++ + PD VV G D L GDRLG ++S G D
Sbjct: 31 VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRD 90
Query: 339 CL--RFLRSFNVPLMVLGGGGYTIR 361
L R +R VP++++ GGY R
Sbjct: 91 ELVFRMVRGRRVPILMVTSGGYQKR 115
>UNIPROTKB|B5MCU6 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00790809
ProteinModelPortal:B5MCU6 STRING:B5MCU6 Ensembl:ENST00000404040
ArrayExpress:B5MCU6 Bgee:B5MCU6 Uniprot:B5MCU6
Length = 247
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 46/149 (30%), Positives = 68/149 (45%)
Query: 217 ELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKF 276
+LL VH R ++ G+G E F RV + + +PG K A + K
Sbjct: 70 DLLVVHTRRYLNELK---GNGHERDFMDDKRVYIMDVYN-RHIYPGDRFAKQ--AIRRK- 122
Query: 277 YALNVPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG- 335
V L G +D+ + I+K ++ + PD VV G D L GDRLG ++S G
Sbjct: 123 ----VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGI 178
Query: 336 -HADCL--RFLRSFNVPLMVLGGGGYTIR 361
D L R +R VP++++ GGY R
Sbjct: 179 VKRDELVFRMVRGRRVPILMVTSGGYQKR 207
>UNIPROTKB|B5MCV5 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
Bgee:B5MCV5 Uniprot:B5MCV5
Length = 204
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 32/101 (31%), Positives = 45/101 (44%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 87 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 143
Query: 222 HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPG 262
R +D+D H G+G E F RV + + +PG
Sbjct: 144 ISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYN-RHIYPG 183
>UNIPROTKB|B5MCS3 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00878794
ProteinModelPortal:B5MCS3 STRING:B5MCS3 Ensembl:ENST00000402259
ArrayExpress:B5MCS3 Bgee:B5MCS3 Uniprot:B5MCS3
Length = 181
Score = 113 (44.8 bits), Expect = 0.00019, P = 0.00019
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 281 VPLNDGLDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKG--HAD 338
V L G +D+ + I+K ++ + PD VV G D L GDRLG ++S G D
Sbjct: 57 VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRD 116
Query: 339 CL--RFLRSFNVPLMVLGGGGYTIR 361
L R +R VP++++ GGY R
Sbjct: 117 ELVFRMVRGRRVPILMVTSGGYQKR 141
>UNIPROTKB|C9JEC8 [details] [associations]
symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
Length = 166
Score = 110 (43.8 bits), Expect = 0.00024, P = 0.00024
Identities = 28/81 (34%), Positives = 38/81 (46%)
Query: 166 QASAGGSIGAA-VKLNRGDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGI---LELLKV 221
+ GG+I A + + RG A+N GG HH GFC DI L I E ++
Sbjct: 87 RTQTGGTIMAGKLAVERG---WAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEG 143
Query: 222 HRRVLYVDIDVHHGDGVEEAF 242
R +D+D H G+G E F
Sbjct: 144 ISRATIIDLDAHQGNGHERDF 164
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 490 459 0.00095 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 232
No. of states in DFA: 616 (65 KB)
Total size of DFA: 305 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.51u 0.09s 35.60t Elapsed: 00:00:02
Total cpu time: 35.55u 0.10s 35.65t Elapsed: 00:00:02
Start: Thu May 9 19:09:07 2013 End: Thu May 9 19:09:09 2013
WARNINGS ISSUED: 1