BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041066
MGIPGWRITFHLVGLISVIVGILVYLFAKDTRCSDGKSRAKDQKPHKAFCFVIFAYVVRT
IGFSHGLTVFLMTLFTIAGSLGGLFGGWMGDTLVKRLPNSGRIILSQISSGSVIPIAAVL
LLVLPDDPSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEIVPERSRTSIYALDRSFESIL
ASFAPPVVGLLAQHVHGYKPVPKGASNSLEVETDRENAASLAKALYTAIGIPMTICCFIY
SFLYCTYPRDRERVRIDALIESEMQKLEKDNAPSLKKNSQRHFSESKELNEKEVTDIDIE
YGGEESTDIDDNDKKSLLPHQVTFSNLQH

High Scoring Gene Products

Symbol, full name Information P value
AT5G10190 protein from Arabidopsis thaliana 7.6e-72
UNE2
AT1G78130
protein from Arabidopsis thaliana 1.2e-71
AT4G36790 protein from Arabidopsis thaliana 2.6e-28
AT2G18590 protein from Arabidopsis thaliana 1.6e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041066
        (329 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2184163 - symbol:AT5G10190 "AT5G10190" species...   693  7.6e-72   2
TAIR|locus:2194749 - symbol:UNE2 "AT1G78130" species:3702...   668  1.2e-71   2
TAIR|locus:2115430 - symbol:AT4G36790 "AT4G36790" species...   295  2.6e-28   2
TAIR|locus:2046313 - symbol:AT2G18590 "AT2G18590" species...   248  1.6e-22   2


>TAIR|locus:2184163 [details] [associations]
            symbol:AT5G10190 "AT5G10190" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0015144 "carbohydrate transmembrane transporter
            activity" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0055085
            "transmembrane transport" evidence=IEA] [GO:0002237 "response to
            molecule of bacterial origin" evidence=RCA] [GO:0006487 "protein
            N-linked glycosylation" evidence=RCA] [GO:0009627 "systemic
            acquired resistance" evidence=RCA] [GO:0015706 "nitrate transport"
            evidence=RCA] [GO:0031347 "regulation of defense response"
            evidence=RCA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0055085
            eggNOG:COG0477 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 HOGENOM:HOG000240506
            EMBL:AF360162 EMBL:AY113893 IPI:IPI00548750 RefSeq:NP_196581.1
            UniGene:At.1632 ProteinModelPortal:Q9C5L6 STRING:Q9C5L6
            PRIDE:Q9C5L6 EnsemblPlants:AT5G10190.1 GeneID:830883
            KEGG:ath:AT5G10190 TAIR:At5g10190 InParanoid:Q9C5L6 OMA:VICCTIY
            PhylomeDB:Q9C5L6 ProtClustDB:CLSN2679494 ArrayExpress:Q9C5L6
            Genevestigator:Q9C5L6 Uniprot:Q9C5L6
        Length = 488

 Score = 693 (249.0 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
 Identities = 133/210 (63%), Positives = 159/210 (75%)

Query:    61 IGFSHGLTVFLMTLFTIAXXXXXXXXXXXXXXXVKRLPNSGRIILSQISSGSXXXXXXXX 120
             IGFSH  T  L+TLFTI+                K+ PN GRI LSQ+SSGS        
Sbjct:   252 IGFSHKTTAVLVTLFTISCSLGGLFGGYMGDTLAKKFPNGGRIFLSQVSSGSAIPLAAIL 311

Query:   121 XXXXXXXXSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEIVPERSRTSIYALDRSFESIL 180
                     ST F HGLVLVIMGLCISWN   TN PIFAEIVPER+RTSIYALDRSFESIL
Sbjct:   312 LIGLPDDPSTAFSHGLVLVIMGLCISWNGAATNGPIFAEIVPERARTSIYALDRSFESIL 371

Query:   181 ASFAPPVVGLLAQHVHGYKPVPKGASNSLEVETDRENAASLAKALYTAIGIPMTICCFIY 240
             ASFAPP+VG+LAQ+++GYKP+P+G+++S++++TDR NAASLAKALYT+IGIPM ICC IY
Sbjct:   372 ASFAPPIVGMLAQNIYGYKPIPEGSTSSVKIDTDRANAASLAKALYTSIGIPMVICCTIY 431

Query:   241 SFLYCTYPRDRERVRIDALIESEMQKLEKD 270
             SFLYCTYPRDR+R ++ ALIESEMQ+L ++
Sbjct:   432 SFLYCTYPRDRDRAKMQALIESEMQQLNEE 461

 Score = 52 (23.4 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
 Identities = 16/46 (34%), Positives = 17/46 (36%)

Query:     2 GIPGWRITFHXXXXXXXXXXXXXXXFAKDTRCSDGK--SRAKDQKP 45
             G+ GWRI F                FA D   SD K     KD KP
Sbjct:   160 GVAGWRIAFLLVAVVSVIVGILVRLFATDPHYSDRKITKHVKD-KP 204


>TAIR|locus:2194749 [details] [associations]
            symbol:UNE2 "AT1G78130" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0009567 "double fertilization forming a zygote
            and endosperm" evidence=IMP] [GO:0015706 "nitrate transport"
            evidence=RCA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0055085
            eggNOG:COG0477 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 EMBL:AC012680 GO:GO:0009567
            UniGene:At.18013 UniGene:At.71185 HOGENOM:HOG000240506
            ProtClustDB:CLSN2679494 EMBL:BT004567 EMBL:AK227331 IPI:IPI00528928
            PIR:E96810 RefSeq:NP_177937.1 ProteinModelPortal:Q9C9R9
            EnsemblPlants:AT1G78130.1 GeneID:844149 KEGG:ath:AT1G78130
            TAIR:At1g78130 InParanoid:Q9C9R9 OMA:SANSPNW PhylomeDB:Q9C9R9
            Genevestigator:Q9C9R9 Uniprot:Q9C9R9
        Length = 490

 Score = 668 (240.2 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
 Identities = 129/207 (62%), Positives = 155/207 (74%)

Query:    61 IGFSHGLTVFLMTLFTIAXXXXXXXXXXXXXXXVKRLPNSGRIILSQISSGSXXXXXXXX 120
             IGFSHG T FLM LF  A                 RLPNSGRIIL+QISS S        
Sbjct:   255 IGFSHGKTAFLMGLFVAASSLGGLFGGKMGDFLSTRLPNSGRIILAQISSASAIPLAAIL 314

Query:   121 XXXXXXXXSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEIVPERSRTSIYALDRSFESIL 180
                     ST  +HGL+LV++GL +SWNAP TNNPIFAEIVPE+SRTS+YALD+SFESIL
Sbjct:   315 LLVLPDDPSTAAIHGLILVLLGLFVSWNAPATNNPIFAEIVPEKSRTSVYALDKSFESIL 374

Query:   181 ASFAPPVVGLLAQHVHGYKPVPKGASNSLEVETDRENAASLAKALYTAIGIPMTICCFIY 240
             +SFAPP+VG+LAQHV+GYKP+P+G+S S E+ TDRENAASLAKALYT+IG+PM  CCFIY
Sbjct:   375 SSFAPPIVGILAQHVYGYKPIPEGSSRSTEIATDRENAASLAKALYTSIGLPMAACCFIY 434

Query:   241 SFLYCTYPRDRERVRIDALIESEMQKL 267
             SFLY +YP DR+R R++A I+SEM++L
Sbjct:   435 SFLYRSYPLDRDRARMEAFIDSEMREL 461

 Score = 75 (31.5 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
 Identities = 17/51 (33%), Positives = 19/51 (37%)

Query:     1 MGIPGWRITFHXXXXXXXXXXXXXXXFAKDTR-CSDGKSRAKDQKPHKAFC 50
             MGIPGWR+ FH               FA D     DG   +      K FC
Sbjct:   159 MGIPGWRVAFHIVGVISVIVGVLVRVFANDPHFVKDGVDVSNQPGSRKPFC 209


>TAIR|locus:2115430 [details] [associations]
            symbol:AT4G36790 "AT4G36790" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0055085 eggNOG:COG0477
            InterPro:IPR016196 SUPFAM:SSF103473 EMBL:AL161590
            InterPro:IPR020846 PROSITE:PS50850 EMBL:Z99708 EMBL:AY063899
            EMBL:AY122924 IPI:IPI00543369 PIR:D85434 RefSeq:NP_195397.1
            UniGene:At.27151 ProteinModelPortal:O23203 PaxDb:O23203
            PRIDE:O23203 EnsemblPlants:AT4G36790.1 GeneID:829832
            KEGG:ath:AT4G36790 TAIR:At4g36790 HOGENOM:HOG000240506
            InParanoid:O23203 OMA:MAGSEFW PhylomeDB:O23203
            ProtClustDB:CLSN2685584 Genevestigator:O23203 Uniprot:O23203
        Length = 489

 Score = 295 (108.9 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
 Identities = 69/213 (32%), Positives = 107/213 (50%)

Query:    52 VIFAYVVRTIGFSHGLTVFLMTLFTIAXXXXXXXXXXXXXXXVKRLPNSGRIILSQISSG 111
             V F      IGF H  T  L+ +F                   +  PNSGR++ +Q S+ 
Sbjct:   280 VFFTMWFELIGFDHNQTAALLGVFATGGAIGTLMGGIIADKMSRIYPNSGRVMCAQFSAF 339

Query:   112 SXXXXXXXXXXXXXXXXSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEIVPERSRTSIYA 171
                              S+  +  + L +MGL I+W     N P+FAE+VP R RT IYA
Sbjct:   340 MGIPFSIILLKVIPQSTSSYSIFSITLFLMGLTITWCGSAVNAPMFAEVVPPRHRTMIYA 399

Query:   172 LDRSFESILASFAPPVVGLLAQHVHGYKPVPKGASNSLEVETDRENAASLAKALYTAIGI 231
              DR+FE   +SFA P+VG+L++ + GY    +G  + L+  + RE A +L+K L + + +
Sbjct:   400 FDRAFEGSFSSFAAPLVGILSEKLFGYDS--RGI-DPLKGSSVRE-ADALSKGLLSMMAV 455

Query:   232 PMTICCFIYSFLYCTYPRDRERVRIDALIESEM 264
             P  +CC  Y+ L+  + +DRE  +I +  E+EM
Sbjct:   456 PFGLCCLCYTPLHFVFQKDRENAKIASSKETEM 488

 Score = 44 (20.5 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query:     2 GIPGWRITF 10
             GIPGWR  F
Sbjct:   197 GIPGWRCAF 205


>TAIR|locus:2046313 [details] [associations]
            symbol:AT2G18590 "AT2G18590" species:3702 "Arabidopsis
            thaliana" [GO:0005351 "sugar:hydrogen symporter activity"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0015144
            "carbohydrate transmembrane transporter activity" evidence=ISS]
            [GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 EMBL:CP002685
            GO:GO:0055085 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 IPI:IPI00548157
            RefSeq:NP_179449.5 UniGene:At.52811 PRIDE:F4IQK9
            EnsemblPlants:AT2G18590.1 GeneID:816374 KEGG:ath:AT2G18590
            OMA:NIGAIEQ Uniprot:F4IQK9
        Length = 473

 Score = 248 (92.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
 Identities = 59/204 (28%), Positives = 94/204 (46%)

Query:    61 IGFSHGLTVFLMTLFTIAXXXXXXXXXXXXXXXVKRLPNSGRIILSQISSGSXXXXXXXX 120
             IGF H     L  +F                   +  PNSGR+I +Q S           
Sbjct:   274 IGFDHNQAALLNGIFATGQAIGSLVGGIIADKMSRVFPNSGRLICAQFSVFMGAMFSIVL 333

Query:   121 XXXXXXXXSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEIVPERSRTSIYALDRSFESIL 180
                     ++ ++  + L +MGL I+W  P  N+PI AEIVP + RT +YA DR+ E   
Sbjct:   334 LRMIPQSVNSFYIFLVTLFLMGLTITWCGPAINSPILAEIVPAKHRTMVYAFDRALEVTF 393

Query:   181 ASFAPPVVGLLAQHVHGYKPVPKGASNSLEVETDRENAASLAKALYTAIGIPMTICCFIY 240
             +SF  P+VG++++ + G+    KG  +   V      A +L K +   + +P  +CC  Y
Sbjct:   394 SSFGAPLVGIMSEKLFGFDA--KGIDH---VNDSGREAEALGKGIMWMMALPFGLCCLCY 448

Query:   241 SFLYCTYPRDRERVRIDALIESEM 264
             + L+  + +DR+  R  +  E EM
Sbjct:   449 TPLHFLFRKDRKIDRTTSSREVEM 472

 Score = 39 (18.8 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
 Identities = 9/31 (29%), Positives = 9/31 (29%)

Query:     2 GIPGWRITFHXXXXXXXXXXXXXXXFAKDTR 32
             GI GWR  F                F  D R
Sbjct:   167 GISGWRCAFILSATLSTIVGILVFFFVSDPR 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      329       283   0.00084  115 3  11 22  0.48    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  196 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.91u 0.11s 27.02t   Elapsed:  00:00:01
  Total cpu time:  26.91u 0.11s 27.02t   Elapsed:  00:00:01
  Start:  Thu May  9 19:31:15 2013   End:  Thu May  9 19:31:16 2013

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