BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041066
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0TWF4|AT221_PHANO Autophagy-related protein 22-1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=ATG22-1 PE=3 SV=2
Length = 566
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 22/170 (12%)
Query: 72 MTLFTIAGSLGGLFGGWMGDTLVKRLPNSGR-IILSQISSGSVIPIAAVLLLVLPDDPST 130
+ L +I G+ G + + KR + I+L ++ +IP+ LL +P
Sbjct: 384 IALLSITSIGSGIIGAFAWPRVQKRFSLQPKTILLCCVAGMEMIPLYG-LLGFIPLFKKL 442
Query: 131 GFMHGL--------VLVIMGLCISWNAPTTNNPIFAEIVPERSRTSIYALDRSFESILAS 182
GF+ GL V V+ G+ + + ++A ++PE S + +AL + ++
Sbjct: 443 GFI-GLQQPWEIYPVAVLHGIVMG-GVSSYARSVYAPLIPEGSEAAFFALYAVTDKGSSA 500
Query: 183 FAPPVVGLLAQHVHGYKP----------VPKGASNSLEVETDRENAASLA 222
F P +VG L H +P +P L+VE RE+A ++A
Sbjct: 501 FGPALVGWLVDHAGSIRPAFIFLAVLVVLPAPLLWMLDVEKGREDAKAMA 550
>sp|Q6ZSM3|MOT12_HUMAN Monocarboxylate transporter 12 OS=Homo sapiens GN=SLC16A12 PE=2
SV=2
Length = 486
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 50/255 (19%), Positives = 99/255 (38%), Gaps = 60/255 (23%)
Query: 50 CFVIFAYVV---RTIGFSHGLTVFLMTLFTIAGSLGGLFGGWMGDTLVKRLPNSGRIILS 106
C +F Y+V ++G SH FLM++ + +G + GW+ D +R + + +
Sbjct: 267 CSPLFVYLVPYALSVGVSHQQAAFLMSILGVIDIIGNITFGWLTD---RRCLKNYQYVCY 323
Query: 107 QISSGS------VIPIAAVLLLVLPDDPSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEI 160
+ G +P+ L L++P + G+ G + ++ P EI
Sbjct: 324 LFAVGMDGLCYLCLPMLQSLPLLVPFSCTFGYFDGAYVTLI--------PVVTT----EI 371
Query: 161 VPERSRTSIYALDRSFESILASFAPPVVGLLAQHVHGYKPVPKGASNSLEVETDRENAAS 220
V S +S + ++ +PP+ G L Y
Sbjct: 372 VGTTSLSSALGVVYFLHAVPYLVSPPIAGRLVDTTGSY---------------------- 409
Query: 221 LAKALYTAIGIPMTICCFIYSFLYCTYPRDRERVRIDALIESEMQKLEKDNAPSLK--KN 278
A + G M I+S + + R +R+R ++++Q + K++ P L+ N
Sbjct: 410 --TAAFLLCGFSM-----IFSSVLLGFARLIKRMR-----KTQLQFIAKESDPKLQLWTN 457
Query: 279 SQRHFSESKELNEKE 293
+S ++EL++K
Sbjct: 458 GSVAYSVARELDQKH 472
>sp|Q0GQS6|PBUE_BACAM Purine efflux pump PbuE OS=Bacillus amyloliquefaciens GN=pbuE PE=1
SV=1
Length = 386
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 61/195 (31%)
Query: 5 GWRITFHLVGLISVIVGILVYLFAKDTRCSDGKSRAKDQKPHKAFCFVIFAYVVRTIGFS 64
GWR+ F +G++S++ +++ +F + K A+ P + ++TIG +
Sbjct: 155 GWRVLFLGIGVLSLVSMLIISVFFE-------KIPAEKMIPFRE--------QIKTIGNA 199
Query: 65 HGLTVFLMTLFTIAGSL----------------------------------GGLFGGWMG 90
+ L+TLFT+AG GG FGGW+
Sbjct: 200 KIASAHLVTLFTLAGHYTLYAYFAPFLETTLHLSSVWVSVCYFLFGLSAVCGGPFGGWLY 259
Query: 91 DTLVKRLPNSGRIILSQISSGSVIPIAAVLLLVLPDDPSTGFMHGLVLVIMGLCISWNAP 150
D RL + I+L +S A++L +LP + + +VI GL +SW+
Sbjct: 260 D----RLGSFKSIMLVTVSF-------ALILFILPLSTVSLIVFLPAMVIWGL-LSWSLA 307
Query: 151 TTNNPIFAEIVPERS 165
+I PE S
Sbjct: 308 PAQQSYLIKIAPESS 322
>sp|Q797E3|PBUE_BACSU Purine efflux pump PbuE OS=Bacillus subtilis (strain 168) GN=pbuE
PE=1 SV=1
Length = 388
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 5 GWRITFHLVGLISVIVGILVYLFA-----------KDTRCSDGKSRAKDQKPHKAFC--- 50
GWRI F +GL+++I +++ +F ++ + G + F
Sbjct: 155 GWRILFLGIGLLALISMLIISIFFERIPAEKMIPFREQLKTIGNLKIASSHLVTMFTLAG 214
Query: 51 -FVIFAYVVRTIGFSHGLTVFLMT----LFTIAGSLGGLFGGWMGDTLVKRLPNSGRIIL 105
+ ++AY + + L+ F ++ LF I+ GG FGG + D RL + I+L
Sbjct: 215 HYTLYAYFAPFLEETLHLSSFWVSICYFLFGISAVCGGPFGGALSD----RLGSFKSILL 270
Query: 106 SQISSGSVIPIAAVLLLVLPDDPSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEIVPERS 165
+GS A+++ +LP S+ V+VI GL +SW+ EI P+ S
Sbjct: 271 ---VTGSF----AIIMFLLPLSTSSMIFFLPVMVIWGL-LSWSLAPAQQSYLIEIAPDSS 322
>sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=DAL5 PE=1 SV=1
Length = 543
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 2 GIPGWRITFHLVGLISVIVGILVYLFAKD 30
I GWR F + G+I++ +GIL++L+ D
Sbjct: 243 AIKGWRTLFVITGVITIFIGILIFLWIPD 271
>sp|Q8I659|YPF11_PLAF7 Uncharacterized protein PFB0765w OS=Plasmodium falciparum (isolate
3D7) GN=PFB0765w PE=4 SV=1
Length = 1383
Score = 33.5 bits (75), Expect = 2.3, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 261 ESEMQKLEKDNA-PSLKKNSQR-HFSESKELNEKEVTDIDIEYGGEESTDIDDNDKK 315
E E+Q EK+N SLKKN Q H +++ELNEKE+ + +Y E + I+ +KK
Sbjct: 886 EYEIQIKEKENEIDSLKKNEQNLHVLKNEELNEKEII-LKNKYDKEINMIIEQYNKK 941
>sp|P77228|YDFJ_ECOLI Putative inner membrane metabolite transport protein YdfJ
OS=Escherichia coli (strain K12) GN=ydfJ PE=5 SV=1
Length = 427
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 56 YVVRTIGFSHGLTVFLMTLFTIAGSLGGLFGGWMGDTLVKRLPNSGRIILSQISSGSVIP 115
Y+V+T+ F+ + + + +I G + F GW+ D + +R+P II++ S I
Sbjct: 239 YLVQTLLFNKAIPTDALMISSILGFMTIPFLGWLSDKIGRRIP---YIIMNT----SAIV 291
Query: 116 IAAVLLLVLPDDPSTGFMHGLVLVIMGLCISWNAPTTNNPIFAEIVPERSRTSIYALDRS 175
+A +L ++ D + L+++ C N AE+ ++R + A+ +
Sbjct: 292 LAWPMLSIIVDKSYAPSTIMVALIVIHNCAVLGLFALENITMAEMFGCKNRFTRMAISKE 351
Query: 176 FESILAS-FAPPVVGLLAQHVHGYKPV 201
++AS F P + G+ + P+
Sbjct: 352 IGGLIASGFGPILAGIFCTMTESWYPI 378
>sp|Q00798|RBP1_PLAVB Reticulocyte-binding protein 1 OS=Plasmodium vivax (strain Belem)
GN=RBP1 PE=4 SV=3
Length = 2833
Score = 32.3 bits (72), Expect = 5.1, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 208 SLEVETDRENAASLAKALYTAIG-IPMTICCFIYSFLYCTYPRDRERVRIDALIESEMQK 266
++ +++ + A ++K L G I + I S L E VR L E K
Sbjct: 1338 NMNLQSAIQGNAGISKELNELKGVIELLISTNYSSILEYVKKNSSESVRFSQLANGEFTK 1397
Query: 267 LEKDNAPSLKKNSQRHFSESKELNEKEVTDIDIEYGGEESTDIDDNDKK 315
E + +KN+ +E+++L E+ V D+D +DIDD KK
Sbjct: 1398 AEGE-----EKNASARLAEAEKLKEQIVKDLDY-------SDIDDKVKK 1434
>sp|A0M6G6|ATPF_GRAFK ATP synthase subunit b OS=Gramella forsetii (strain KT0803) GN=atpF
PE=3 SV=1
Length = 164
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 234 TICCFIYSFLYCTYP--------RDRERVRIDALIESE-----MQKLEKDNAPSLKK-NS 279
TI I FL + R+RE+ DAL +E MQ L+ DN LK+ +
Sbjct: 15 TIVFLILLFLMAKFAWKPILGSVRNREQSINDALASAEKARKEMQNLQSDNEQLLKEARA 74
Query: 280 QRH--FSESKELNEKEVTDIDIEYGGEESTDIDDNDKKSLLPHQVTFSNLQH 329
+R E++EL EK +TD E + + D + L Q + L++
Sbjct: 75 ERDAILKEARELKEKVITDASDEAKVKADKIVADAKRSIELEKQSAMAELKN 126
>sp|Q8LQJ9|FTSH4_ORYSJ ATP-dependent zinc metalloprotease FTSH 4, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH4 PE=3 SV=1
Length = 709
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 23/141 (16%)
Query: 161 VPERSRTSIYALDRSFESILASFAPPVVGLLAQH-VHGYKPVPKGASNSLEVETDRENAA 219
+PE+ TS S + +LA + G +A+ + G V GAS +D +NA
Sbjct: 517 LPEKDETSF-----SRKQMLAWLDVSMAGRVAEELIFGDSEVTSGAS------SDFQNAT 565
Query: 220 SLAKALYTAIGIPMTICCFIYSFLYCTYPRDRERVRIDA--LIESEMQKLEK---DNAPS 274
+A+A+ T G+ + F+ Y D + + + LIE E++ L + +NA +
Sbjct: 566 KMARAMVTKYGMSKQL-----GFVSYNYEDDGKSMSTETRLLIEQEVKSLLENAYNNAKT 620
Query: 275 -LKKNSQRHFSESKELNEKEV 294
L K+S+ H ++ L E E
Sbjct: 621 ILTKHSKEHHVLAQALLEHET 641
>sp|P46458|CCMH_HAEIN Putative cytochrome c-type biogenesis protein CcmH OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=ccmH PE=5 SV=1
Length = 459
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 22/124 (17%)
Query: 199 KPVPKGASNSLEVETDRENAASLAKAL-------YTAIGIPMTICCFIYSF--LYCTYPR 249
KP + A S E+ TD +N A LA+ L +T I I T+ + F L C +
Sbjct: 124 KPKTQSAVKSQEILTDEDN-ARLAELLNKDKXMNFTLIFILTTLVVALICFYPLLCQFKA 182
Query: 250 DRERVRID---ALIESEMQKLEKDNAPSLKKNSQRHFSESKELNEKEVTDI------DIE 300
+ R D AL S ++++E+DN+ L +N ++ +EL + + D+ +++
Sbjct: 183 KHGQKRDDLNKALYFSRLEEIEQDNSQGLVENVEQL---KQELQKTLLDDVPSKVQENVD 239
Query: 301 YGGE 304
Y G+
Sbjct: 240 YSGK 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,937,942
Number of Sequences: 539616
Number of extensions: 5072444
Number of successful extensions: 15579
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 15536
Number of HSP's gapped (non-prelim): 74
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)