BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041073
(436 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 293 KRYSYPEIIAMTNHFTHK--LGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE--FINE 348
KR+S E+ +++F++K LG+GGFG VYKG+L G L+AVK LK + E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 349 VSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVA 408
V I H N+++L GFC ++R +VY YM NGS+ + + W K +A
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
LG+ARG+ YLH+ CD I+H D+K NI
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANI 173
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 293 KRYSYPEIIAMTNHFTHK--LGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE--FINE 348
KR+S E+ +++F +K LG+GGFG VYKG+L G L+AVK LK + E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 349 VSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVA 408
V I H N+++L GFC ++R +VY YM NGS+ + + W K +A
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
LG+ARG+ YLH+ CD I+H D+K NI
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANI 165
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 6/136 (4%)
Query: 304 TNHFTHK--LGQGGFGSVYKGQLHTGGLIAVKM-LKNSKFSAEEFINEVSTIGRIHHVNV 360
TN+F HK +G G FG VYKG L G +A+K S EEF E+ T+ H ++
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V L+GFC E ++ ++Y+YM NG+L RH++ + S SWE+ E+ +G ARG+ YLH
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 421 GCDVCILHFDIKPHNI 436
I+H D+K NI
Sbjct: 158 R---AIIHRDVKSINI 170
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 6/136 (4%)
Query: 304 TNHFTHK--LGQGGFGSVYKGQLHTGGLIAVKM-LKNSKFSAEEFINEVSTIGRIHHVNV 360
TN+F HK +G G FG VYKG L G +A+K S EEF E+ T+ H ++
Sbjct: 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL 97
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V L+GFC E ++ ++Y+YM NG+L RH++ + S SWE+ E+ +G ARG+ YLH
Sbjct: 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 421 GCDVCILHFDIKPHNI 436
I+H D+K NI
Sbjct: 158 ---RAIIHRDVKSINI 170
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 18/155 (11%)
Query: 295 YSYPEIIAMTNHFT--------HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE-- 344
+S+ E+ +TN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 345 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGS-LDRHIFPKESRGQSFSW 401
F E+ + + H N+V+LLGF S+G +VY YMPNGS LDR SW
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 132
Query: 402 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
++A G A GI +LH + H DIK NI
Sbjct: 133 HMRCKIAQGAANGINFLHENHHI---HRDIKSANI 164
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 18/155 (11%)
Query: 295 YSYPEIIAMTNHFT--------HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE-- 344
+S+ E+ +TN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 345 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGS-LDRHIFPKESRGQSFSW 401
F E+ + + H N+V+LLGF S+G +VY YMPNGS LDR SW
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 126
Query: 402 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
++A G A GI +LH + H DIK NI
Sbjct: 127 HMRCKIAQGAANGINFLHENHHI---HRDIKSANI 158
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 18/155 (11%)
Query: 295 YSYPEIIAMTNHFT--------HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE-- 344
+S+ E+ +TN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 345 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGS-LDRHIFPKESRGQSFSW 401
F E+ + + H N+V+LLGF S+G +VY YMPNGS LDR SW
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 132
Query: 402 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
++A G A GI +LH + H DIK NI
Sbjct: 133 HMRCKIAQGAANGINFLHENHHI---HRDIKSANI 164
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAE---EFINEVSTIGRIHHVNVVQ 362
+ K+G G FG+V++ + H G +AVK+L F AE EF+ EV+ + R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
+G ++ ++V EY+ GSL R + +R Q +L +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL-SMAYDVAKGMNYLHNR- 156
Query: 423 DVCILHFDIKPHNI 436
+ I+H D+K N+
Sbjct: 157 NPPIVHRDLKSPNL 170
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 86/143 (60%), Gaps = 12/143 (8%)
Query: 297 YPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI---NEVSTIG 353
Y EI A + ++G G FG+VYKG+ H G +AVK+LK + E+F NEV+ +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 354 RIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
+ HVN++ +G+ ++ + A+V ++ SL +H+ +E++ Q F +L ++A TA+
Sbjct: 88 KTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQ 143
Query: 414 GIEYLHNGCDVCILHFDIKPHNI 436
G++YLH I+H D+K +NI
Sbjct: 144 GMDYLHAK---NIIHRDMKSNNI 163
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 295 YSYPEIIAMTNHFT--------HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE-- 344
+S+ E+ +TN+F +K G+GGFG VYKG ++ + K+ + EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 345 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGS-LDRHIFPKESRGQSFSW 401
F E+ + H N+V+LLGF S+G +VY Y PNGS LDR SW
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR--LSCLDGTPPLSW 123
Query: 402 EKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
++A G A GI +LH + H DIK NI
Sbjct: 124 HXRCKIAQGAANGINFLHENHHI---HRDIKSANI 155
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 18 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F +KL ++A TARG++YLH
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---S 128
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 129 IIHRDLKSNNI 139
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ S + A+V ++ SL H+ E++ F +KL ++A TARG++YLH
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---S 140
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 141 IIHRDLKSNNI 151
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 78/131 (59%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F +KL ++A TARG++YLH
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAK---S 140
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 141 IIHRDLKSNNI 151
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAE---EFINEVSTIGRIHHVNVVQ 362
+ K+G G FG+V++ + H G +AVK+L F AE EF+ EV+ + R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
+G ++ ++V EY+ GSL R + +R Q +L +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL-SMAYDVAKGMNYLHNR- 156
Query: 423 DVCILHFDIKPHNI 436
+ I+H ++K N+
Sbjct: 157 NPPIVHRNLKSPNL 170
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ S + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 125 IIHRDLKSNNI 135
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 16 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 126
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 127 IIHRDLKSNNI 137
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 125 IIHRDLKSNNI 135
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 130 IIHRDLKSNNI 140
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 34 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 144
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 145 IIHRDLKSNNI 155
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 125 IIHRDLKSNNI 135
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 130 IIHRDLKSNNI 140
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 41 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 151
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 152 IIHRDLKSNNI 162
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 153 IIHRDLKSNNI 163
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
++G G FG+VYKG+ H G +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ ++ + A+V ++ SL H+ E++ F KL ++A TA+G++YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 426 ILHFDIKPHNI 436
I+H D+K +NI
Sbjct: 153 IIHRDLKSNNI 163
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F ++G G FG V+ G +A+K ++ S E+FI E + ++ H +VQL G
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C E + +V+E+M +G L ++ + RG F+ E L + L G+ YL + C+
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 122
Query: 427 LHFDIKPHN 435
+H D+ N
Sbjct: 123 IHRDLAARN 131
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F ++G G FG V+ G +A+K ++ S E+FI E + ++ H +VQL G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C E + +V+E+M +G L ++ + RG F+ E L + L G+ YL + C+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 124
Query: 427 LHFDIKPHN 435
+H D+ N
Sbjct: 125 IHRDLAARN 133
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F ++G G FG V+ G +A+K ++ S E+FI E + ++ H +VQL G
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C E + +V+E+M +G L ++ + RG F+ E L + L G+ YL + C+
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 127
Query: 427 LHFDIKPHN 435
+H D+ N
Sbjct: 128 IHRDLAARN 136
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F ++G G FG V+ G +A+K +K S ++FI E + ++ H +VQL G
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C E + +V+E+M +G L ++ + RG F+ E L + L G+ YL + C+
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 144
Query: 427 LHFDIKPHN 435
+H D+ N
Sbjct: 145 IHRDLAARN 153
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F ++G G FG V+ G +A+K ++ S E+FI E + ++ H +VQL G
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C E + +V E+M +G L ++ + RG F+ E L + L G+ YL + C+
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EACV 125
Query: 427 LHFDIKPHN 435
+H D+ N
Sbjct: 126 IHRDLAARN 134
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQL 363
+G G FG VYKG L T +A+K LK + +F+ E +G+ H N+++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G S+ ++ EYM NG+LD+ F +E G+ FS +L + G A G++YL N
Sbjct: 112 EGVISKYKPMMIITEYMENGALDK--FLREKDGE-FSVLQLVGMLRGIAAGMKYLAN--- 165
Query: 424 VCILHFDIKPHNI 436
+ +H D+ NI
Sbjct: 166 MNYVHRDLAARNI 178
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G FG VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 132 HRDLAARN 139
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ +V EYMP G+L ++ +E + + L +A + +EYL +
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLEKK---NFI 152
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 153 HRDLAARN 160
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F +LG G FG V G+ +A+KM+K S +EFI E + + H +VQL G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 121
Query: 427 LHFDIKPHN 435
LH D+ N
Sbjct: 122 LHRDLAARN 130
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F ++G G FG V+ G +A+K ++ S E+FI E + ++ H +VQL G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C E + +V+E+M +G L ++ + RG F+ E L + L G+ YL + +
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLE---EASV 124
Query: 427 LHFDIKPHN 435
+H D+ N
Sbjct: 125 IHRDLAARN 133
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F +LG G FG V G+ +A+KM+K S +EFI E + + H +VQL G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 125
Query: 427 LHFDIKPHN 435
LH D+ N
Sbjct: 126 LHRDLAARN 134
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 134 HRDLAARN 141
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F +LG G FG V G+ +A+KM+K S +EFI E + + H +VQL G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 427 LHFDIKPHN 435
LH D+ N
Sbjct: 127 LHRDLAARN 135
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 134 HRDLAARN 141
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 132 HRDLAARN 139
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F +LG G FG V G+ +A+KM+K S +EFI E + + H +VQL G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 427 LHFDIKPHN 435
LH D+ N
Sbjct: 127 LHRDLAARN 135
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 139 HRDLAARN 146
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 134 HRDLAARN 141
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 134 HRDLAARN 141
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 139 HRDLAARN 146
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q S L +A + +EYL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 132 HRDLAARN 139
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 134 HRDLAARN 141
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F +LG G FG V G+ +A+KM+K S +EFI E + + H +VQL G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 132
Query: 427 LHFDIKPHN 435
LH D+ N
Sbjct: 133 LHRDLAARN 141
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG----LIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G L G +A+K LK+ ++ +F++E S +G+ H NV+ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ + ++ E+M NGSLD F +++ GQ F+ +L + G A G++YL D+
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQ-FTVIQLVGMLRGIAAGMKYL---ADM 154
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 155 NYVHRDLAARNI 166
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 139 HRDLAARN 146
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 134 HRDLAARN 141
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F +LG G FG V G+ +A+KM+K S +EFI E + + H +VQL G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 427 LHFDIKPHN 435
LH D+ N
Sbjct: 142 LHRDLAARN 150
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
F +LG G FG V G+ +A+KM+K S +EFI E + + H +VQL G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
C++ ++ EYM NG L ++ R Q+ ++L E+ +EYL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 427 LHFDIKPHN 435
LH D+ N
Sbjct: 142 LHRDLAARN 150
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 83 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 137
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 138 HRDLAARN 145
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 80 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 135 HRDLAARN 142
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 139 HRDLAARN 146
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 136 HRDLAARN 143
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 92 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 146
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 147 HRDLAARN 154
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 136 HRDLAARN 143
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 135 HRDLAARN 142
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 139 HRDLAARN 146
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+M G+L ++ +E Q + L +A + +EYL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 428 HFDIKPHN 435
H D+ N
Sbjct: 136 HRDLAARN 143
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL----IAVKMLKN--SKFSAEEFINEVSTI 352
EI A H +G G G V G+L G +A+K LK ++ +F++E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N+++L G + G +V EYM NGSLD F + GQ F+ +L + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G+ YL D+ +H D+ N+
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNV 182
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL----IAVKMLKN--SKFSAEEFINEVSTI 352
EI A H +G G G V G+L G +A+K LK ++ +F++E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N+++L G + G +V EYM NGSLD F + GQ F+ +L + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G+ YL D+ +H D+ N+
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNV 182
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 291 MPKRYSYP---------EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL----IAVKMLK- 336
MP Y P EI A +G G FG V G+L G +A+K LK
Sbjct: 1 MPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV 60
Query: 337 -NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESR 395
++ +F+ E S +G+ H N++ L G ++ +V EYM NGSLD F K++
Sbjct: 61 GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD--TFLKKND 118
Query: 396 GQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
GQ F+ +L + G + G++YL D+ +H D+ NI
Sbjct: 119 GQ-FTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNI 155
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLGQG FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K G+ +L ++A A G+ Y+
Sbjct: 64 KLVQLYAVVSE-EPIXIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 121 ER---MNYVHRDLRAANI 135
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + +I H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 139 DLRAANI 145
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+ ++ E+M G+L ++ +E Q S L +A + +EYL
Sbjct: 286 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE 335
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + +LG G FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K+ G++ L ++A A G+ Y+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 122 ER---MNYIHRDLRSANI 136
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLGQG FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K G+ +L ++A A G+ Y+
Sbjct: 67 KLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 124 ER---MNYVHRDLRAANI 138
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLGQG FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K G+ +L ++A A G+ Y+
Sbjct: 63 KLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 120 ER---MNYVHRDLRAANI 134
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLGQG FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K G+ +L ++A A G+ Y+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 122 ER---MNYVHRDLRAANI 136
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 251 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 305 DLRAANI 311
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 251 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 305 DLRAANI 311
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 252 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 305
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 306 DLRAANI 312
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG----LIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G L G +A+K LK+ ++ +F++E S +G+ H NV+ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ + ++ E+M NGSLD F +++ GQ F+ +L + G A G++YL D+
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQ-FTVIQLVGMLRGIAAGMKYL---ADM 128
Query: 425 CILHFDIKPHNI 436
+H + NI
Sbjct: 129 NYVHRALAARNI 140
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 139 DLRAANI 145
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 139 DLRAANI 145
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 251 -EPIYIVGEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 305 DLRAANI 311
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 139 DLRAANI 145
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 368 SEGSKRAVVYEYMPNGSL 385
+ ++ E+M G+L
Sbjct: 283 TREPPFYIITEFMTYGNL 300
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L G +A+K LK ++ +F+ E S +G+ H NVV L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G + G +V E+M NG+LD F ++ GQ F+ +L + G A G+ YL D+
Sbjct: 111 GVVTRGKPVMIVIEFMENGALD--AFLRKHDGQ-FTVIQLVGMLRGIAAGMRYL---ADM 164
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 165 GYVHRDLAARNI 176
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
HKLG G +G VY+G L +AVK LK EEF+ E + + I H N+VQLLG C
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 368 SEGSKRAVVYEYMPNGSL 385
+ ++ E+M G+L
Sbjct: 325 TREPPFYIITEFMTYGNL 342
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLGQG FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K G+ +L ++A A G+ Y+
Sbjct: 74 KLVQLYAVVSE-EPIYIVCEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 131 ER---MNYVHRDLRAANI 145
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG----LIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V +G+L G +A+K LK ++ EF++E S +G+ H N+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G + ++ E+M NG+LD F + + GQ F+ +L + G A G+ YL ++
Sbjct: 82 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 135
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 136 SYVHRDLAARNI 147
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG----LIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V +G+L G +A+K LK ++ EF++E S +G+ H N+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G + ++ E+M NG+LD F + + GQ F+ +L + G A G+ YL ++
Sbjct: 84 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 137
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 138 SYVHRDLAARNI 149
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 334 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 387
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 388 DLRAANI 394
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM GSL F K G+ +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 430 DIKPHNI 436
D+ NI
Sbjct: 139 DLAAANI 145
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGG----LIAVKMLKN--SKFSAEEFINEVSTI 352
EI A +G G FG V G+L G +A+K LK + +F++E S +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N++ L G ++ ++ EYM NGSLD + + R F+ +L + G
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIG 141
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G++YL D+ +H D+ NI
Sbjct: 142 SGMKYLS---DMSAVHRDLAARNI 162
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLGQG FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K G+ +L +++ A G+ Y+
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 128 ER---MNYVHRDLRAANI 142
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLGQG FG V+ G + +A+K LK S E F+ E + ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VQL SE +V EYM GSL F K G+ +L +++ A G+ Y+
Sbjct: 71 KLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 128 ER---MNYVHRDLRAANI 142
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM G L F K G+ +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVMEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 139 DLRAANI 145
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGG----LIAVKMLKN--SKFSAEEFINEVSTI 352
EI A +G G FG V G+L G +A+K LK + +F++E S +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N++ L G ++ ++ EYM NGSLD + + R F+ +L + G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIG 126
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G++YL D+ +H D+ NI
Sbjct: 127 SGMKYLS---DMSYVHRDLAARNI 147
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGG----LIAVKMLKN--SKFSAEEFINEVSTI 352
EI A +G G FG V G+L G +A+K LK + +F++E S +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N++ L G ++ ++ EYM NGSLD + + R F+ +L + G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLRGIG 120
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G++YL D+ +H D+ NI
Sbjct: 121 SGMKYLS---DMSYVHRDLAARNI 141
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
KLGQG FG V+ G + +A+K LK S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EYM G L F K G+ +L ++A A G+ Y+ + +H
Sbjct: 85 -EPIYIVTEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 430 DIKPHNI 436
D++ NI
Sbjct: 139 DLRAANI 145
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 2 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 58
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 115
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 116 MAAQIAEGMAFIE---ERNYIHRDLRAANI 142
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 1 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 57
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 58 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 114
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 115 MAAQIAEGMAFIE---ERNYIHRDLRAANI 141
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 5 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 61
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 118
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 119 MAAQIAEGMAFIE---ERNYIHRDLRAANI 145
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 6 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 62
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 119
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANI 146
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GFVHRDLAARNI 178
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTI 352
E+ A +G G FG V G+L +A+K LK ++ +F+ E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N+++L G ++ +V EYM NGSLD + +++ F+ +L + G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIA 128
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G++YL D+ +H D+ NI
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNI 149
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL----IAVKMLKN--SKFSAEEFINEVSTI 352
E+ A +G G FG V G+L +A+K LK ++ +F+ E S +
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N+++L G ++ +V EYM NGSLD + +++ F+ +L + G A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIA 145
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G++YL D+ +H D+ NI
Sbjct: 146 SGMKYL---SDMGYVHRDLAARNI 166
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 164
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 165 GYVHRDLAARNI 176
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 9 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 65
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 122
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 123 MAAQIAEGMAFIE---ERNYIHRDLRAANI 149
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 6 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 62
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 119
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANI 146
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+LG G FG V G+ +AVKM+K S +EF E T+ ++ H +V+ G CS+
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+V EY+ NG L ++ S G+ +L E+ G+ +L + +H
Sbjct: 75 EYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 430 DIKPHN 435
D+ N
Sbjct: 129 DLAARN 134
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GYVHRDLAARNI 178
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GYVHRDLAARNI 178
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GYVHRDLAARNI 178
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GYVHRDLAARNI 178
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GYVHRDLAARNI 178
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V EYM NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GYVHRDLAARNI 178
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 8 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 64
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 121
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 122 MAAQIAEGMAFIE---ERNYIHRDLRAANI 148
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P T +LG G FG V+ G + +AVK LK S + F+
Sbjct: 10 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 66
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + ++ H +V+L ++ ++ EYM NGSL F K G + KL +
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 123
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+A A G+ ++ + +H D++ NI
Sbjct: 124 MAAQIAEGMAFIE---ERNYIHRDLRAANI 150
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
E+ T +LG G FG V+ G + +AVK LK S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ EYM NGSL F K G + KL ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 126 E---ERNYIHRDLRAANI 140
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
E+ T +LG G FG V+ G + +AVK LK S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ EYM NGSL F K G + KL ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 126 E---ERNYIHRDLRAANI 140
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
E+ T +LG G FG V+ G + +AVK LK S + F+ E + + ++ H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ EYM NGSL F K G + KL ++A A G+ ++
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 121 E---ERNYIHRDLRAANI 135
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
E+ T +LG G FG V+ G + +AVK LK S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ EYM NGSL F K G + KL ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 126 E---ERNYIHRDLRAANI 140
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLG-FC 367
+G+G FG V G + G +AVK +KN +A+ F+ E S + ++ H N+VQLLG
Sbjct: 12 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQS-FSWEKLHEVALGTARGIEYLHNGCDVCI 426
E +V EYM GSL ++ SRG+S + L + +L +EYL
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 427 LHFDIKPHNI 436
+H D+ N+
Sbjct: 124 VHRDLAARNV 133
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLG-FC 367
+G+G FG V G + G +AVK +KN +A+ F+ E S + ++ H N+VQLLG
Sbjct: 199 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQS-FSWEKLHEVALGTARGIEYLHNGCDVCI 426
E +V EYM GSL ++ SRG+S + L + +L +EYL
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 427 LHFDIKPHNI 436
+H D+ N+
Sbjct: 311 VHRDLAARNV 320
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 308 THKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKF-SAEEFINEVSTIGRIHHVNVVQLLG 365
T LG G FG V+K + GL +A K++K EE NE+S + ++ H N++QL
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 366 FCSEGSKRAVVYEYMPNGSL-DRHIFPKESRGQSFSWEKLHEVALGTA--RGIEYLHNGC 422
+ +V EY+ G L DR I +S++ +L + GI ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRII------DESYNLTELDTILFMKQICEGIRHMHQ-- 205
Query: 423 DVCILHFDIKPHNI 436
+ ILH D+KP NI
Sbjct: 206 -MYILHLDLKPENI 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLG-FC 367
+G+G FG V G + G +AVK +KN +A+ F+ E S + ++ H N+VQLLG
Sbjct: 27 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQS-FSWEKLHEVALGTARGIEYLHNGCDVCI 426
E +V EYM GSL ++ SRG+S + L + +L +EYL
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 427 LHFDIKPHNI 436
+H D+ N+
Sbjct: 139 VHRDLAARNV 148
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 310 KLGQGGFGSVYKGQLHT------GGLIAVKMLKNSKFSA-EEFINEVSTIGRIHHVNVVQ 362
+LG+G FG V+ + H L+AVK LK + SA ++F E + + H ++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDR 387
G C+EG +V+EYM +G L+R
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNR 109
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLG-FC 367
+G+G FG V G + G +AVK +KN +A+ F+ E S + ++ H N+VQLLG
Sbjct: 18 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQS-FSWEKLHEVALGTARGIEYLHNGCDVCI 426
E +V EYM GSL ++ SRG+S + L + +L +EYL
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 427 LHFDIKPHNI 436
+H D+ N+
Sbjct: 130 VHRDLAARNV 139
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 21/163 (12%)
Query: 292 PKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL---IAVKMLKN--SKFSAEEFI 346
P YP + F +G+G FG V K ++ GL A+K +K SK +F
Sbjct: 4 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 63
Query: 347 NEVSTIGRI-HHVNVVQLLGFCSEGSKRAVVYEYMPNGSL------------DRHIFPKE 393
E+ + ++ HH N++ LLG C + EY P+G+L D
Sbjct: 64 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 123
Query: 394 SRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
S + S ++L A ARG++YL +H D+ NI
Sbjct: 124 STASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 163
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 310 KLGQGGFGSVYKGQLHT------GGLIAVKMLKNSKFSA-EEFINEVSTIGRIHHVNVVQ 362
+LG+G FG V+ + H L+AVK LK + SA ++F E + + H ++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDR 387
G C+EG +V+EYM +G L+R
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNR 103
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 311 LGQGGFGSVYKGQLHTGGLIAVKMLKNS-----KFSAEEFINEVSTIGRIHHVNVVQLLG 365
+G GGFG VY+ G +AVK ++ + E E + H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
C + +V E+ G L+R + G+ + L A+ ARG+ YLH+ V
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 426 ILHFDIKPHNI 436
I+H D+K NI
Sbjct: 129 IIHRDLKSSNI 139
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 21/163 (12%)
Query: 292 PKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL---IAVKMLKN--SKFSAEEFI 346
P YP + F +G+G FG V K ++ GL A+K +K SK +F
Sbjct: 14 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 73
Query: 347 NEVSTIGRI-HHVNVVQLLGFCSEGSKRAVVYEYMPNGSL------------DRHIFPKE 393
E+ + ++ HH N++ LLG C + EY P+G+L D
Sbjct: 74 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 133
Query: 394 SRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
S + S ++L A ARG++YL +H D+ NI
Sbjct: 134 STASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 173
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 5/138 (3%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + +LG G FG V+ G + +AVK LK S + F+ E + + + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L + ++ EYM GSL F K G KL + + A G+ Y+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSL--LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 419 HNGCDVCILHFDIKPHNI 436
+H D++ N+
Sbjct: 127 ERK---NYIHRDLRAANV 141
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 306 HFTHKLGQGGFGSVYKGQL-HTGGLIAVK--MLKNSKFSAE------EFINEVSTIGRIH 356
+ ++G+GGFG V+KG+L ++A+K +L +S+ E EF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
H N+V+L G + +V E++P G L + + W + L A GIE
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIE 136
Query: 417 YLHNGCDVCILHFDIKPHNI 436
Y+ N + I+H D++ NI
Sbjct: 137 YMQN-QNPPIVHRDLRSPNI 155
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL----IAVKMLKN--SKFSAEEFINEVSTI 352
E+ A +G G FG V G+L +A+K LK ++ +F+ E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 353 GRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
G+ H N+++L G ++ +V E M NGSLD + +++ F+ +L + G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIA 128
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
G++YL D+ +H D+ NI
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNI 149
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 306 HFTHKLGQGGFGSVYKGQL-HTGGLIAVK--MLKNSKFSAE------EFINEVSTIGRIH 356
+ ++G+GGFG V+KG+L ++A+K +L +S+ E EF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
H N+V+L G + +V E++P G L + + W + L A GIE
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIE 136
Query: 417 YLHNGCDVCILHFDIKPHNI 436
Y+ N + I+H D++ NI
Sbjct: 137 YMQN-QNPPIVHRDLRSPNI 155
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 306 HFTHKLGQGGFGSVYKGQL-HTGGLIAVK--MLKNSKFSAE------EFINEVSTIGRIH 356
+ ++G+GGFG V+KG+L ++A+K +L +S+ E EF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
H N+V+L G + +V E++P G L + + W + L A GIE
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIE 136
Query: 417 YLHNGCDVCILHFDIKPHNI 436
Y+ N + I+H D++ NI
Sbjct: 137 YMQN-QNPPIVHRDLRSPNI 155
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 310 KLGQGGFGSVYKGQLHT------GGLIAVKMLKNSKFSA-EEFINEVSTIGRIHHVNVVQ 362
+LG+G FG V+ + H L+AVK LK + SA ++F E + + H ++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDR 387
G C+EG +V+EYM +G L+R
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNR 132
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 311 LGQGGFGSVYKGQLH----TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G FGSV +G L T +AVK +K +S+ EEF++E + + H NV++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 364 LGFCSEGS-----KRAVVYEYMPNGSLDRHIF--PKESRGQSFSWEKLHEVALGTARGIE 416
LG C E S K V+ +M G L ++ E+ + + L + + A G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 417 YLHNGCDVCILHFDIKPHN 435
YL N LH D+ N
Sbjct: 162 YLSNR---NFLHRDLAARN 177
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V E M NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GAVHRDLAARNI 178
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLG G FG V+ G + +AVK LK S + F+ E + + + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ E+M GSL F K G KL + + A G+ Y+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSL--LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 419 HNGCDVCILHFDIKPHNI 436
+H D++ N+
Sbjct: 126 ERK---NYIHRDLRAANV 140
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
E+ T +LG G FG V+ G + +AVK LK S + F+ E + + ++ H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ EYM NGSL F K G + KL ++A A G+ ++
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H +++ NI
Sbjct: 122 E---ERNYIHRNLRAANI 136
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGL----IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G G FG V G+L +A+K LK ++ +F+ E S +G+ H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G ++ +V E M NGSLD + +++ F+ +L + G A G++YL D+
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYL---SDM 166
Query: 425 CILHFDIKPHNI 436
+H D+ NI
Sbjct: 167 GYVHRDLAARNI 178
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 311 LGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG 370
+G+G FG V K + +A+K ++ S+ + FI E+ + R++H N+V+L G C
Sbjct: 16 VGRGAFGVVCKAKWRAKD-VAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 371 SKRAVVYEYMPNGSL-----DRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ +V EY GSL P + + SW L ++G+ YLH+
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 125
Query: 426 ILHFDIKPHNI 436
++H D+KP N+
Sbjct: 126 LIHRDLKPPNL 136
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 311 LGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG 370
+G+G FG V K + +A+K ++ S+ + FI E+ + R++H N+V+L G C
Sbjct: 17 VGRGAFGVVCKAKWRAKD-VAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 371 SKRAVVYEYMPNGSL-----DRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ +V EY GSL P + + SW L ++G+ YLH+
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 126
Query: 426 ILHFDIKPHNI 436
++H D+KP N+
Sbjct: 127 LIHRDLKPPNL 137
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 21/163 (12%)
Query: 292 PKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGL---IAVKMLKN--SKFSAEEFI 346
P YP + F +G+G FG V K ++ GL A+K +K SK +F
Sbjct: 11 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 70
Query: 347 NEVSTIGRI-HHVNVVQLLGFCSEGSKRAVVYEYMPNGSL------------DRHIFPKE 393
E+ + ++ HH N++ LLG C + EY P+G+L D
Sbjct: 71 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 130
Query: 394 SRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
S + S ++L A ARG++YL +H ++ NI
Sbjct: 131 STASTLSSQQLLHFAADVARGMDYLSQK---QFIHRNLAARNI 170
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
E+ T +LG G G V+ G + +AVK LK S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ EYM NGSL F K G + KL ++A A G+ ++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 419 HNGCDVCILHFDIKPHNI 436
+ +H D++ NI
Sbjct: 126 E---ERNYIHRDLRAANI 140
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ ++ + KL + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 134 --GTKRYI-HRDLATRNI 148
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE------------V 407
++ LLG C++ V+ EY G+L ++ +E G +S+ H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNV 181
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I +++H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 159 EN---HFIHRDIAARN 171
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 307 FTHKLGQGGFGSVYKGQLHT------GGLIAVKMLKNSKFSA-EEFINEVSTIGRIHHVN 359
+LG+G FG V+ + + L+AVK LK+ +A ++F E + + H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIF-------------PKESRGQSFSWEKLHE 406
+V+ G C +G +V+EYM +G L++ + P++++G+ + LH
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH- 137
Query: 407 VALGTARGIEYL 418
+A A G+ YL
Sbjct: 138 IASQIASGMVYL 149
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I +++H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 173 EN---HFIHRDIAARN 185
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 129
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 130 --GTKRYI-HRDLATRNI 144
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 130
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 131 --GTKRYI-HRDLATRNI 145
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 134
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 135 --GTKRYI-HRDLATRNI 149
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 128
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 129 --GTKRYI-HRDLATRNI 143
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 136
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 137 --GTKRYI-HRDLATRNI 151
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 161
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 162 --GTKRYI-HRDLATRNI 176
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 130
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 131 --GTKRYI-HRDLATRNI 145
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 133
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 134 --GTKRYI-HRDLATRNI 148
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 130
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 131 --GTKRYI-HRDLATRNI 145
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 165 EN---HFIHRDIAARN 177
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
+LG G FG VYK + TG L A K+++ S+ E++I E+ + H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
K ++ E+ P G++D I + RG + ++ V + +LH+ I+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDA-IMLELDRG--LTEPQIQVVCRQMLEALNFLHSK---RII 131
Query: 428 HFDIKPHNI 436
H D+K N+
Sbjct: 132 HRDLKAGNV 140
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 135
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 136 --GTKRYI-HRDLATRNI 150
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
+LG G FG VYK + TG L A K+++ S+ E++I E+ + H +V+LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
K ++ E+ P G++D I + RG + ++ V + +LH+ I+
Sbjct: 86 YHDGKLWIMIEFCPGGAVD-AIMLELDRG--LTEPQIQVVCRQMLEALNFLHSK---RII 139
Query: 428 HFDIKPHNI 436
H D+K N+
Sbjct: 140 HRDLKAGNV 148
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 175 EN---HFIHRDIAARN 187
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 137
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 138 --GTKRYI-HRDLATRNI 152
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE------------V 407
++ LLG C++ V+ EY G+L ++ + G FS+ H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNV 181
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 159 EN---HFIHRDIAARN 171
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 185 EN---HFIHRDIAARN 197
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 148
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 149 --GTKRYI-HRDLATRNI 163
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 159 EN---HFIHRDIAARN 171
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 158 EN---HFIHRDIAARN 170
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 173 EN---HFIHRDIAARN 185
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 158 EN---HFIHRDIAARN 170
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K+L+ S + +E ++E + + V +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
LG C S +V + MP G L H+ +E+RG+ S + L + A+G+ YL D
Sbjct: 85 LGICLT-STVQLVTQLMPYGCLLDHV--RENRGRLGS-QDLLNWCMQIAKGMSYLE---D 137
Query: 424 VCILHFDIKPHNI 436
V ++H D+ N+
Sbjct: 138 VRLVHRDLAARNV 150
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 199 EN---HFIHRDIAARN 211
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE-----FINEVSTIGRIHHVNVVQLL 364
KLG G + +VYKG T G+ LK K +EE I E+S + + H N+V+L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVA--LKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 365 GFCSEGSKRAVVYEYMPNGS---LDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+K +V+E+M N +D RG + K + L +G+ + H
Sbjct: 70 DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHEN 127
Query: 422 CDVCILHFDIKPHNI 436
ILH D+KP N+
Sbjct: 128 ---KILHRDLKPQNL 139
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 173 EN---HFIHRDIAARN 185
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 148
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 149 --GTKRYI-HRDLATRNI 163
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 176 EN---HFIHRDIAARN 188
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 311 LGQGGFGSVYKGQLH------TGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+G + R ++ E M G L R P+ S+ S + L VA A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 420 NGCDVCILHFDIKPHN 435
+H DI N
Sbjct: 150 EN---HFIHRDIAARN 162
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
KLG+G +GSVYK TG ++A+K + + +E I E+S + + +VV+ G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ + +V EY GS+ I R ++ + +++ + T +G+EYLH + +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKI 147
Query: 428 HFDIKPHNI 436
H DIK NI
Sbjct: 148 HRDIKAGNI 156
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ EY+P GSL ++ + R KL + +G+EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI---KLLQYTSQICKGMEYL 131
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 307 FTHKLGQGGFGSVY-----KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNV 360
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 361 VQLLGFCSEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
V+ G C +R ++ E++P GSL ++ + R KL + +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI---KLLQYTSQICKGMEYL 133
Query: 419 HNGCDVCILHFDIKPHNI 436
G I H D+ NI
Sbjct: 134 --GTKRYI-HRDLATRNI 148
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE------------V 407
++ LLG C++ V+ EY G+L ++ + G +S+ H
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 149 AYQVARGMEYL--ASKKCI-HRDLAARNV 174
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE------------V 407
++ LLG C++ V+ EY G+L ++ + G +S+ H
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 145 AYQVARGMEYL--ASKKCI-HRDLAARNV 170
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE------------V 407
++ LLG C++ V+ EY G+L ++ + G +S+ H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNV 181
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE------------V 407
++ LLG C++ V+ EY G+L ++ + G +S+ H
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 148 AYQVARGMEYL--ASKKCI-HRDLAARNV 173
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE-----FINEVSTIGRIH---HVNV 360
++G G +G+VYK + H+G +A+K ++ + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 361 VQLLGFCSEGS-----KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGI 415
V+L+ C+ K +V+E++ D + ++ E + ++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 416 EYLHNGCDVCILHFDIKPHNI 436
++LH C I+H D+KP NI
Sbjct: 126 DFLHANC---IVHRDLKPENI 143
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE------------V 407
++ LLG C++ V+ EY G+L ++ + G +S+ H
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 197 AYQVARGMEYL--ASKKCI-HRDLAARNV 222
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE-----FINEVSTIGRIH---HVNV 360
++G G +G+VYK + H+G +A+K ++ + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 361 VQLLGFCSEGS-----KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGI 415
V+L+ C+ K +V+E++ D + ++ E + ++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 416 EYLHNGCDVCILHFDIKPHNI 436
++LH C I+H D+KP NI
Sbjct: 126 DFLHANC---IVHRDLKPENI 143
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE-----FINEVSTIGRIH---HVNV 360
++G G +G+VYK + H+G +A+K ++ + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 361 VQLLGFCSEGS-----KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGI 415
V+L+ C+ K +V+E++ D + ++ E + ++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 416 EYLHNGCDVCILHFDIKPHNI 436
++LH C I+H D+KP NI
Sbjct: 126 DFLHANC---IVHRDLKPENI 143
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 288 QSWMPKRYSYPEIIAMTNHFT-------HKLGQGGFGSVYKGQLHTGGLI-AVKMLKNSK 339
Q M P+I +T HFT LG+G FG+VY + I A+K+L S+
Sbjct: 3 QKVMENSSGTPDI--LTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ 60
Query: 340 FSAE----EFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESR 395
E + E+ +HH N+++L + + + ++ EY P G L + + +
Sbjct: 61 IEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QK 116
Query: 396 GQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHN 435
+F ++ + A + Y H ++H DIKP N
Sbjct: 117 SCTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPEN 153
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVKMLKN---SKFSAEEFINEVSTIGRIHHVNVVQL 363
F KLG G FG V+ + + GL V N S+ E+ E+ + + H N++++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+ +V E G L I ++RG++ S + E+ + Y H+
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 424 VCILHFDIKPHNI 436
++H D+KP NI
Sbjct: 144 -HVVHKDLKPENI 155
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 309 HKLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFS--AEEFINEVSTIGRIHHVNVVQLLG 365
++G+G FG V+ G+L L+AVK + + +F+ E + + H N+V+L+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
C++ +V E + G + + G + L ++ A G+EYL + C C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC--C 234
Query: 426 ILHFDIKPHN 435
I H D+ N
Sbjct: 235 I-HRDLAARN 243
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEEFINEVSTIGRI---------HHVN 359
++G G +G+VYK + H+G +A+K ++ +ST+ + H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 360 VVQLLGFCSEGS-----KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARG 414
VV+L+ C+ K +V+E++ D + ++ E + ++ RG
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+++LH C I+H D+KP NI
Sbjct: 133 LDFLHANC---IVHRDLKPENI 151
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 209 TYQLARGMEYL--ASQKCI-HRDLAARNV 234
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 309 HKLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFS--AEEFINEVSTIGRIHHVNVVQLLG 365
++G+G FG V+ G+L L+AVK + + +F+ E + + H N+V+L+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
C++ +V E + G + + G + L ++ A G+EYL + C C
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC--C 234
Query: 426 ILHFDIKPHN 435
I H D+ N
Sbjct: 235 I-HRDLAARN 243
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE------FINEVSTIGRIHHVNVVQ 362
K+G+G +G VYK + G ++A LK + AE+ I E+S + +HH N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVA---LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
L+ +V+E+M + + + G S K++ L RG+ + H
Sbjct: 84 LIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQL--LRGVAHCHQH- 138
Query: 423 DVCILHFDIKPHNI 436
ILH D+KP N+
Sbjct: 139 --RILHRDLKPQNL 150
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 70
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VVY +Y+P + RH + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNL 153
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRG------------QSFSWEKLHEV 407
++ LLG C++ V+ EY G+L ++ + G + S + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNV 181
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + + +AVKMLK+ + + I+E+ + I H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRG------------QSFSWEKLHEV 407
++ LLG C++ V+ EY G+L ++ + G + S + L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
A ARG+EYL CI H D+ N+
Sbjct: 141 AYQVARGMEYL--ASKKCI-HRDLAARNV 166
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 306 HFTHKLGQGGFGSVYKGQL------HTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHH 357
+ +G+G FG V++ + ++AVKMLK S +F E + + +
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 358 VNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
N+V+LLG C+ G +++EYM G L+ +
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEE------FINEVSTIGRIHHVNVVQ 362
K+G+G +G VYK + G ++A LK + AE+ I E+S + +HH N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVA---LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
L+ +V+E+M + + + G S K++ L RG+ + H
Sbjct: 84 LIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQL--LRGVAHCHQH- 138
Query: 423 DVCILHFDIKPHNI 436
ILH D+KP N+
Sbjct: 139 --RILHRDLKPQNL 150
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 150 TYQLARGMEYL--ASQKCI-HRDLTARNV 175
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 293 KRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSA--EE 344
K+ EI F +LG+ FG VYKG L +A+K LK+ EE
Sbjct: 16 KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE 75
Query: 345 FINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
F +E R+ H NVV LLG ++ ++++ Y +G L
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 310 KLGQGGFGSVYKGQLHT------GGLIAVKMLKNSKFSA-EEFINEVSTIGRIHHVNVVQ 362
+LG+G FG V+ + + L+AVK LK++ +A ++F E + + H ++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDR 387
G C EG +V+EYM +G L++
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNK 104
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 26/196 (13%)
Query: 260 IVFLVFLIHKYRTTLQTVDNV------EKFLHNQQSWMPKRYSYPEIIAMTNHFTHKLGQ 313
+V ++++ H+ R + + V ++ ++P + E+ + +LGQ
Sbjct: 1 LVIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEW---EVAREKITMSRELGQ 57
Query: 314 GGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQLLG 365
G FG VY+G + +A+K + + E EF+NE S + + +VV+LLG
Sbjct: 58 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 117
Query: 366 FCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTARGIEYLH 419
S+G V+ E M G L R + P+ S K+ ++A A G+ YL+
Sbjct: 118 VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN 177
Query: 420 NGCDVCILHFDIKPHN 435
+H D+ N
Sbjct: 178 AN---KFVHRDLAARN 190
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLK-NSKFSAEEFIN-----EVSTIGRIHHVNVVQL 363
LG+G F +VYK + +T ++A+K +K + A++ IN E+ + + H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
L S ++V+++M D + K++ + + L T +G+EYLH
Sbjct: 78 LDAFGHKSNISLVFDFM---ETDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 424 VCILHFDIKPHNI 436
ILH D+KP+N+
Sbjct: 133 --ILHRDLKPNNL 143
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRG------------QSFSWEKLHEV 407
++ LLG C++ V+ EY G+L ++ + G + +++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 155 TYQLARGMEYL--ASQKCI-HRDLAARNV 180
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 131
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 132 ---LQIAHFDLKPENI 144
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 131
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 132 ---LQIAHFDLKPENI 144
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ EY G+L ++ + G +S++ L
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 152 TYQLARGMEYL--ASQKCI-HRDLAARNV 177
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 142 DGMAYLNAN---KFVHRDLAARN 161
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 149 DGMAYLNAN---KFVHRDLAARN 168
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P + S K+ ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 149 DGMAYLNAN---KFVHRDLAARN 168
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 296 SYPEIIAMTNHFTHK--LGQGGFGSVYK-GQLHTGGLIAVK-MLKNSKFSAEEFINEVST 351
S P I + H LG+G FG K TG ++ +K +++ + + F+ EV
Sbjct: 1 SMPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV 60
Query: 352 IGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGT 411
+ + H NV++ +G + + + EY+ G+L R I +S + W + A
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL-RGII--KSMDSQYPWSQRVSFAKDI 117
Query: 412 ARGIEYLHNGCDVCILHFDIKPHN 435
A G+ YLH+ + I+H D+ HN
Sbjct: 118 ASGMAYLHS---MNIIHRDLNSHN 138
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 142 DGMAYLNAN---KFVHRDLAARN 161
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 20 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 140 DGMAYLNAN---KFVHRDLAARN 159
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSA--EEFINEVS 350
EI F +LG+ FG VYKG L +A+K LK+ EEF +E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 351 TIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
R+ H NVV LLG ++ ++++ Y +G L
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 136 DGMAYLNAN---KFVHRDLAARN 155
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 19 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P + S K+ ++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 139 DGMAYLNAN---KFVHRDLAARN 158
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSA-------EEFINEVSTIGRIHHVNV 360
+LG G F V K Q TG A K +K + S+ EE EV+ + I H N+
Sbjct: 18 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + + L ++ G+ YLH+
Sbjct: 78 ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLHS 133
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 134 K---RIAHFDLKPENI 146
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 14 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 134 DGMAYLNAN---KFVHRDLAARN 153
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSV-YKGQLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + HTG +AVK + K E + NEV + HH NVV +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + VV E++ G+L + +R + E++ V L R + YLHN ++
Sbjct: 112 LVGDELWVVMEFLEGGALTDIV--THTR---MNEEQIATVCLSVLRALSYLHNQ---GVI 163
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 164 HRDIKSDSI 172
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 143 DGMAYLNAN---KFVHRDLAARN 162
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 143 DGMAYLNAN---KFVHRDLAARN 162
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSA-------EEFINEVSTIGRIHHVNV 360
+LG G F V K Q TG A K +K + S+ EE EV+ + I H N+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + + L ++ G+ YLH+
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLHS 126
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 127 K---RIAHFDLKPENI 139
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 307 FTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSF---SWEKLHEVALGTA 412
+VV+LLG S+G V+ E M G L R + P+ S K+ ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 413 RGIEYLHNGCDVCILHFDIKPHN 435
G+ YL+ +H D+ N
Sbjct: 136 DGMAYLNAN---KFVHRDLAARN 155
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
+LG G FG VYK Q T L A K++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+ G++D + E + + ++ V T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 428 HFDIKPHNI 436
H D+K NI
Sbjct: 158 HRDLKAGNI 166
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
+LG G FG VYK Q T L A K++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+ G++D + E + + ++ V T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 428 HFDIKPHNI 436
H D+K NI
Sbjct: 158 HRDLKAGNI 166
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
+LG G FG VYK Q T L A K++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ E+ G++D + E + + ++ V T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 428 HFDIKPHNI 436
H D+K NI
Sbjct: 158 HRDLKAGNI 166
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ Y G+L ++ + G +S++ L
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + E L ++ G+ YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 421 GCDVCILHFDIKPHNI 436
+ I HFD+KP NI
Sbjct: 133 ---LQIAHFDLKPENI 145
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ S+D F S + +G+ + H+
Sbjct: 71 DVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 125 RVLHRDLKPQNL 136
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ S+D F S + +G+ + H+
Sbjct: 72 DVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 126 RVLHRDLKPQNL 137
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKML--KNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+V+KG G + +K++ K+ + S + + + IG + H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
LG C GS +V +Y+P GSL H+ ++ RG + + L + A+G+ YL
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLEE 151
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 309 HKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNV 360
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTARG 414
V+LLG S+G VV E M +G L R + P+ L E +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 415 IEYLH 419
+ YL+
Sbjct: 143 MAYLN 147
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKML--KNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+V+KG G + +K++ K+ + S + + + IG + H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
LG C GS +V +Y+P GSL H+ ++ RG + + L + A+G+ YL
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLEE 133
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 311 LGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRI-HHVN 359
LG+G FG V K + +AVKMLK+ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWE------------KLHEV 407
++ LLG C++ V+ Y G+L ++ + G +S++ L
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
ARG+EYL CI H D+ N+
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNV 188
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 309 HKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNV 360
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTARG 414
V+LLG S+G VV E M +G L R + P+ L E +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 415 IEYLH 419
+ YL+
Sbjct: 143 MAYLN 147
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 309 HKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNV 360
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTARG 414
V+LLG S+G VV E M +G L R + P+ L E +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 415 IEYLH 419
+ YL+
Sbjct: 143 MAYLN 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQ 362
H K+G+G +G VYK Q + G A+K ++ K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
L + +V+E++ + L + + E +S + + L GI Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCH--- 117
Query: 423 DVCILHFDIKPHNI 436
D +LH D+KP N+
Sbjct: 118 DRRVLHRDLKPQNL 131
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQ 362
H K+G+G +G VYK Q + G A+K ++ K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
L + +V+E++ + L + + E +S + + L GI Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCH--- 117
Query: 423 DVCILHFDIKPHNI 436
D +LH D+KP N+
Sbjct: 118 DRRVLHRDLKPQNL 131
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQ 362
H K+G+G +G VYK Q + G A+K ++ K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
L + +V+E++ + L + + E +S + + L GI Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSF---LLQLLNGIAYCH--- 117
Query: 423 DVCILHFDIKPHNI 436
D +LH D+KP N+
Sbjct: 118 DRRVLHRDLKPQNL 131
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ S+D F S + +G+ + H+
Sbjct: 70 DVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 124 RVLHRDLKPENL 135
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ S+D F S + +G+ + H+
Sbjct: 72 DVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 126 RVLHRDLKPENL 137
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 309 HKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNV 360
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTARG 414
V+LLG S+G VV E M +G L R + P+ L E +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 415 IEYLH 419
+ YL+
Sbjct: 143 MAYLN 147
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 309 HKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNV 360
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTARG 414
V+LLG S+G VV E M +G L R + P+ L E +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 415 IEYLH 419
+ YL+
Sbjct: 143 MAYLN 147
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKL 70
Query: 356 HHVNVVQL-LGFCSEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNL 153
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYK-GQLHTGGLIAVKMLKNSKF-------SAEEFINEVSTIGRIHHVNV 360
+LG G F V K Q TG A K +K + S EE EV+ + I H N+
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L + KES + + + L ++ G+ YLH+
Sbjct: 92 ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----LDGVHYLHS 147
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 148 K---RIAHFDLKPENI 160
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + P + KLG G FG V+ + +AVK +K S E F+
Sbjct: 2 QKPWEKDAWEIPR---ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFL 58
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + + H +V+L ++ ++ E+M GSL F K G KL +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLID 115
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ A G+ ++ +H D++ NI
Sbjct: 116 FSAQIAEGMAFIEQR---NYIHRDLRAANI 142
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 309 HKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNV 360
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTARG 414
V+LLG S+G VV E M +G L R + P+ L E +A A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 415 IEYLH 419
+ YL+
Sbjct: 144 MAYLN 148
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 30 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 83
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 142
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 143 QL--FRSLAYIHS---FGICHRDIKPQNL 166
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 311 LGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLG----- 365
+G GGFG V+K + G V +K K++ E+ EV + ++ HVN+V G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYV--IKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGF 76
Query: 366 -----FCSEGSKRA------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARG 414
S+ S R+ + E+ G+L++ I ++ RG+ E+ +G
Sbjct: 77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITKG 134
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
++Y+H+ +++ D+KP NI
Sbjct: 135 VDYIHSK---KLINRDLKPSNI 153
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 309 HKLGQGGFGSVYKGQL------HTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNV 360
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTARG 414
V+LLG S+G VV E M +G L R + P+ L E +A A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 415 IEYLH 419
+ YL+
Sbjct: 140 MAYLN 144
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKL 70
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNL 153
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 18 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKL 71
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 130
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 131 QL--FRSLAYIHS---FGICHRDIKPQNL 154
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 36 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 89
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 148
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 149 QL--FRSLAYIHS---FGICHRDIKPQNL 172
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 25 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 78
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 137
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 138 QL--FRSLAYIHS---FGICHRDIKPQNL 161
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----RELQIMRKL 70
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNL 153
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 82
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 142 QL--FRSLAYIHS---FGICHRDIKPQNL 165
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 82
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 142 QL--FRSLAYIHS---FGICHRDIKPQNL 165
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 22 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 75
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 134
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 135 QL--FRSLAYIHS---FGICHRDIKPQNL 158
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 45 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 98
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 157
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 158 QL--FRSLAYIHS---FGICHRDIKPQNL 181
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
EI + KLG G FG V+ + +AVK +K S E F+ E + + + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+V+L ++ ++ E+M GSL F K G KL + + A G+ ++
Sbjct: 238 KLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 419 HNGCDVCILHFDIKPHNI 436
+H D++ NI
Sbjct: 295 EQ---RNYIHRDLRAANI 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 311 LGQGGFGSVYKGQ-LHTGG-----LIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQ 362
LG+G FG V K H G +AVKMLK + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRG----------------------QSFS 400
L G CS+ ++ EY GSL F +ESR ++ +
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL--RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 401 WEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L A ++G++YL ++ ++H D+ NI
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNI 181
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 21 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 74
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 133
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 134 QL--FRSLAYIHS---FGICHRDIKPQNL 157
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 287 QQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI 346
Q+ W + EI + KLG G FG V+ + +AVK +K S E F+
Sbjct: 175 QKPWEKDAW---EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFL 231
Query: 347 NEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE 406
E + + + H +V+L ++ ++ E+M GSL F K G KL +
Sbjct: 232 AEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLID 288
Query: 407 VALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ A G+ ++ +H D++ NI
Sbjct: 289 FSAQIAEGMAFIEQ---RNYIHRDLRAANI 315
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 309 HKLGQGGFGSVY--------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHV 358
+LGQG FG VY KG+ T +AVK + S E EF+NE S +
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAET--RVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLD---RHIFPKESRGQSFSWEKLHE---VALGTA 412
+VV+LLG S+G VV E M +G L R + P+ L E +A A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 413 RGIEYLH 419
G+ YL+
Sbjct: 140 DGMAYLN 146
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 104
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 164 QL--FRSLAYIHS---FGICHRDIKPQNL 187
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 286 NQQSW-MPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKG-QLHTGGLIAVKMLK---NSKF 340
N+ +W +PK Y P TH +G G +GSV +G +A+K L S+
Sbjct: 34 NKTAWELPKTYVSP---------TH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 83
Query: 341 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEY---MPNGSLDRHIFPKESRGQ 397
A+ E+ + + H NV+ LL + S Y++ MP D ++ G
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QKIMGM 139
Query: 398 SFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
FS EK+ + +G++Y+H+ ++H D+KP N+
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNL 175
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 112 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 167
Query: 418 L 418
L
Sbjct: 168 L 168
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 311 LGQGGFGSVYKGQ-LHTGG-----LIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQ 362
LG+G FG V K H G +AVKMLK + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESR 395
L G CS+ ++ EY GSL F +ESR
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL--RGFLRESR 121
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 53 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 106
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 165
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 166 QL--FRSLAYIHS---FGICHRDIKPQNL 189
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 311 LGQGGFGSVYKGQ-LHTGG-----LIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQ 362
LG+G FG V K H G +AVKMLK + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESR 395
L G CS+ ++ EY GSL F +ESR
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL--RGFLRESR 121
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 104
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 164 QL--FRSLAYIHS---FGICHRDIKPQNL 187
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 286 NQQSW-MPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKG-QLHTGGLIAVKMLK---NSKF 340
N+ +W +PK Y P TH +G G +GSV +G +A+K L S+
Sbjct: 16 NKTAWELPKTYVSP---------TH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 65
Query: 341 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEY---MPNGSLDRHIFPKESRGQ 397
A+ E+ + + H NV+ LL + S Y++ MP D ++ G
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QKIMGL 121
Query: 398 SFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
FS EK+ + +G++Y+H+ ++H D+KP N+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNL 157
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 111 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 166
Query: 418 L 418
L
Sbjct: 167 L 167
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 55 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 108
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 167
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 168 QL--FRSLAYIHS---FGICHRDIKPQNL 191
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKML-KNSKFSA---EEFINEVSTIGRIHHVNVVQLLG 365
LG+G F VY+ + +HTG +A+KM+ K + + A + NEV ++ H ++++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + + +V E NG ++R++ ++R + FS + G+ YLH+
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSH---G 132
Query: 426 ILHFDIKPHNI 436
ILH D+ N+
Sbjct: 133 ILHRDLTLSNL 143
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 307 FTHKLGQGGFGSV--YKGQLHTGGLIAVK-MLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
F KLG+GGF V +G LH G A+K +L + + EE E +H N+++L
Sbjct: 33 FIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 364 LGFC--SEGSKRA--VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+ +C G+K ++ + G+L I + +G + +++ + LG RG+E +H
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 420 NGCDVCILHFDIKPHNI 436
H D+KP NI
Sbjct: 152 AK---GYAHRDLKPTNI 165
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 90 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 145
Query: 418 L 418
L
Sbjct: 146 L 146
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKML---KNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G +G V K + TG ++A+K + K + + E+ + ++ H N+V LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 367 CSEGSKRAVVYEYMPNGSLDR-HIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
C + + +V+E++ + LD +FP ++ + + GI + H+
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSH---N 144
Query: 426 ILHFDIKPHNI 436
I+H DIKP NI
Sbjct: 145 IIHRDIKPENI 155
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 418 L 418
L
Sbjct: 148 L 148
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 418 L 418
L
Sbjct: 149 L 149
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRI-------HHV 358
H K+G G FGSV+K G I +K SK ++E + + + H
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VV+ +E + EY GSL I F +L ++ L RG+ Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 419 HNGCDVCILHFDIKPHNI 436
H+ + ++H DIKP NI
Sbjct: 130 HS---MSLVHMDIKPSNI 144
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 85 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 140
Query: 418 L 418
L
Sbjct: 141 L 141
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 418 L 418
L
Sbjct: 149 L 149
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+ K+L++ +F E+ + ++
Sbjct: 96 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKL 149
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 208
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 209 QL--FRSLAYIHS---FGICHRDIKPQNL 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 418 L 418
L
Sbjct: 148 L 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRI-------HHV 358
H K+G G FGSV+K G I +K SK ++E + + + H
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 69
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VV+ +E + EY GSL I F +L ++ L RG+ Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 419 HNGCDVCILHFDIKPHNI 436
H+ + ++H DIKP NI
Sbjct: 130 HS---MSLVHMDIKPSNI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRI-------HHV 358
H K+G G FGSV+K G I +K SK ++E + + + H
Sbjct: 14 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VV+ +E + EY GSL I F +L ++ L RG+ Y+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 419 HNGCDVCILHFDIKPHNI 436
H+ + ++H DIKP NI
Sbjct: 132 HS---MSLVHMDIKPSNI 146
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 88 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 143
Query: 418 L 418
L
Sbjct: 144 L 144
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRI-------HHV 358
H K+G G FGSV+K G I +K SK ++E + + + H
Sbjct: 10 HELEKIGSGEFGSVFKCVKRLDGCIYA--IKRSKKPLAGSVDEQNALREVYAHAVLGQHS 67
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
+VV+ +E + EY GSL I F +L ++ L RG+ Y+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 419 HNGCDVCILHFDIKPHNI 436
H+ + ++H DIKP NI
Sbjct: 128 HS---MSLVHMDIKPSNI 142
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 22/137 (16%)
Query: 309 HKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFI--NEVSTIGRIHHVNVVQLLGF 366
+LG G FG V++ G + V N+ + +++ NE+S + ++HH ++ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV-- 424
+ + ++ E++ G L F + + A I Y+ C+
Sbjct: 117 FEDKYEMVLILEFLSGGEL-------------FDRIAAEDYKMSEAEVINYMRQACEGLK 163
Query: 425 -----CILHFDIKPHNI 436
I+H DIKP NI
Sbjct: 164 HMHEHSIVHLDIKPENI 180
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G++Y
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 146
Query: 418 L 418
L
Sbjct: 147 L 147
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + K SR F ++ TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSR---FDEQR-------TATYITELANALSYC 128
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 HSKRVIHRDIKPENL 143
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + K SR F ++ TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL-QKLSR---FDEQR-------TATYITELANALSYC 128
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 HSKRVIHRDIKPENL 143
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 128 HSKRVIHRDIKPENL 142
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 128 HSKRVIHRDIKPENL 142
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 130 VIHRDIKPENL 140
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 130 VIHRDIKPENL 140
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 123
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 124 HSKRVIHRDIKPENL 138
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 VIHRDIKPENL 139
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 125 HSKRVIHRDIKPENL 139
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 VIHRDIKPENL 139
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 132 VIHRDIKPENL 142
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAVKMLKNSKFSAEEFIN-EVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+K + K F N E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNRELQIMRKL 70
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNL 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 128 HSKRVIHRDIKPENL 142
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAVKMLKNSKFSAEEFIN-EVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+K + K F N E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNRELQIMRKL 70
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNL 153
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---K 128
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 VIHRDIKPENL 139
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 130
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 131 VIHRDIKPENL 141
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 130
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 131 VIHRDIKPENL 141
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVK--MLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
KLG+G + +VYKG+ T L+A+K L++ + + I EVS + + H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V+EY+ + L +++ + G + + RG+ Y H +
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 427 LHFDIKPHNI 436
LH D+KP N+
Sbjct: 122 LHRDLKPQNL 131
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 125 HSKRVIHRDIKPENL 139
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 307 FTHKLGQGGFGSVY-KGQLHTGGLIAVKMLKNS-KFSAEEFINEVSTIGRIHHVNVVQLL 364
F LG G F V+ Q TG L A+K +K S F NE++ + +I H N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLH-NGCD 423
+ +V + + G L I RG ++ + V ++YLH NG
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRIL---ERG-VYTEKDASLVIQQVLSAVKYLHENG-- 126
Query: 424 VCILHFDIKPHNI 436
I+H D+KP N+
Sbjct: 127 --IVHRDLKPENL 137
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 VIHRDIKPENL 139
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 124
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 125 HSKRVIHRDIKPENL 139
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 134 VIHRDIKPENL 144
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + Q S K E TA I L N C
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 141
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 142 HSKRVIHRDIKPENL 156
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 VIHRDIKPENL 139
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 36/172 (20%)
Query: 294 RYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIG 353
+Y+ + M +G GGFG V+K + G V ++ K++ E+ EV +
Sbjct: 3 KYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYV--IRRVKYNNEKAEREVKALA 60
Query: 354 RIHHVNVVQLLG--------------------FCSEGSKRA---------VVYEYMPNGS 384
++ HVN+V G + E SK + + E+ G+
Sbjct: 61 KLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 385 LDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L++ I ++ RG+ E+ +G++Y+H+ ++H D+KP NI
Sbjct: 121 LEQWI--EKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNI 167
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 134 VIHRDIKPENL 144
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + Q S K E TA I L N C
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 125
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 126 HSKRVIHRDIKPENL 140
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 128 HSKRVIHRDIKPENL 142
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + Q S K E TA I L N C
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL-------QKLS--KFDEQR--TATYITELANALSYC 150
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 151 HSKRVIHRDIKPENL 165
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 154
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 155 VIHRDIKPENL 165
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 121
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 122 HSKRVIHRDIKPENL 136
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 128
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 129 HSKRVIHRDIKPENL 143
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 22/149 (14%)
Query: 298 PEIIAMTNHFTHKLGQGGFGSVYKGQL-HTGGLIAVKMLKNSKFSAEEFIN-EVSTIGRI 355
P+ ++ T+ T +G G FG VY+ +L +G L+A+K + K F N E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNRELQIMRKL 70
Query: 356 HHVNVVQLLGFC-SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEV 407
H N+V+L F S G K+ VY +Y+P + RH + + + + KL+
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 408 ALGTARGIEYLHNGCDVCILHFDIKPHNI 436
L R + Y+H+ I H DIKP N+
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNL 153
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G+++
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 146
Query: 418 L 418
L
Sbjct: 147 L 147
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-------EEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + A EE EVS + ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L F ++ +S S E+ G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 134 K---KIAHFDLKPENI 146
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ TA I L N C
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQR-------TATYITELANALSYC 127
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 128 HSKRVIHRDIKPENL 142
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G ++ + + F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 134 VIHRDIKPENL 144
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE----------VALG 410
LLG C++ G V+ E+ G+L ++ K + + E L++ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L +H D+ NI
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNI 179
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G++ R + + F ++ A + Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 426 ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 134 VIHRDIKPENL 144
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G+++
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 418 L 418
L
Sbjct: 149 L 149
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ + ++ ++ EY P G ++ + + F ++ TA I L N C
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQR-------TATYITELANALSYC 129
Query: 426 ----ILHFDIKPHNI 436
++H DIKP N+
Sbjct: 130 HSKRVIHRDIKPENL 144
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGL------IAVKMLKNSKFSAEE--FINEVSTIGRI-H 356
F LG G FG V + G +AVKMLK++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLH 405
H N+V LLG C+ G V+ EY G L + K G +S+ H
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S EE EVS + ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L F ++ +S S E+ G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 134 K---KIAHFDLKPENI 146
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHIFPKESR--------GQSFSWEKLHEVALGTA 412
LLG C++ G V+ E+ G+L ++ K + + E L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
+G+E+L +H D+ NI
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNI 175
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G+++
Sbjct: 152 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 207
Query: 418 L 418
L
Sbjct: 208 L 208
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G+++
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 418 L 418
L
Sbjct: 149 L 149
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S EE EVS + ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L F ++ +S S E+ G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 134 K---KIAHFDLKPENI 146
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G+++
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 418 L 418
L
Sbjct: 150 L 150
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
Query: 294 RYSYPEIIAMTNHFTHKLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE--FINEVS 350
R+ E I F LG G F V + T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 351 TIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALG 410
+ +I H N+V L G ++ + + G L I K ++ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
++YLH D+ I+H D+KP N+
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENL 147
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G+++
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 418 L 418
L
Sbjct: 150 L 150
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S EE EVS + ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L F ++ +S S E+ G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 134 K---KIAHFDLKPENI 146
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 22/136 (16%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKML--KNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
LG+G +G VY G+ L IA+K + ++S++S + E++ + H N+VQ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKL--HEVALG-----TARGIEYLHN 420
SE + E +P GSL + K W L +E +G G++YLH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSK--------WGPLKDNEQTIGFYTKQILEGLKYLH- 139
Query: 421 GCDVCILHFDIKPHNI 436
D I+H DIK N+
Sbjct: 140 --DNQIVHRDIKGDNV 153
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
Query: 294 RYSYPEIIAMTNHFTHKLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE--FINEVS 350
R+ E I F LG G F V + T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 351 TIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALG 410
+ +I H N+V L G ++ + + G L I K ++ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
++YLH D+ I+H D+KP N+
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENL 147
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSAE--EFINEVSTIGRIHHVN 359
HF +G+G FG VY G L + G I AVK L E +F+ E + H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 360 VVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ LLG C SEGS VV YM +G L R+ E+ + + L L A+G+++
Sbjct: 98 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 153
Query: 418 L 418
L
Sbjct: 154 L 154
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S EE EVS + ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L F ++ +S S E+ G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 134 K---KIAHFDLKPENI 146
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 22/136 (16%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKML--KNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
LG+G +G VY G+ L IA+K + ++S++S + E++ + H N+VQ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKL--HEVALG-----TARGIEYLHN 420
SE + E +P GSL + K W L +E +G G++YLH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSK--------WGPLKDNEQTIGFYTKQILEGLKYLH- 125
Query: 421 GCDVCILHFDIKPHNI 436
D I+H DIK N+
Sbjct: 126 --DNQIVHRDIKGDNV 139
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
Query: 294 RYSYPEIIAMTNHFTHKLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE--FINEVS 350
R+ E I F LG G F V + T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 351 TIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALG 410
+ +I H N+V L G ++ + + G L I K ++ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
++YLH D+ I+H D+KP N+
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENL 147
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 72 DVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 126 RVLHRDLKPQNL 137
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 284 LHNQQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKG------QLHTGGLIAVKMLKN 337
L Q +P S E LG+G FG V + + T +AVKMLK
Sbjct: 8 LDEQCERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKE 67
Query: 338 SKFSAE--EFINEVSTIGRI-HHVNVVQLLGFCS-EGSKRAVVYEYMPNGSLDRHIFPK 392
++E + E+ + I HH+NVV LLG C+ +G V+ EY G+L ++ K
Sbjct: 68 GATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSK 126
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G +G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKF 70
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 123
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 IGITHRDIKPENL 136
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEEFINEVSTIGRI-HHVNVVQLLG-FC 367
+G G +G VYKG+ + TG L A+K++ + EE E++ + + HH N+ G F
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 368 SEG-----SKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
+ + +V E+ GS+ I K ++G + E + + RG+ +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHLHQH- 148
Query: 423 DVCILHFDIKPHNI 436
++H DIK N+
Sbjct: 149 --KVIHRDIKGQNV 160
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 311 LGQGGFGSVYKG-QLHTGGLIAVKML-KNSKFSAEEFINEVSTIGRIH-HVNVVQLLGFC 367
LG+G + V L G AVK++ K + S EV T+ + + N+++L+ F
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ +V+E + GS+ HI + + F+ + V A +++LH I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHTK---GIA 133
Query: 428 HFDIKPHNI 436
H D+KP NI
Sbjct: 134 HRDLKPENI 142
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH--- 122
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 RVLHRDLKPQNL 134
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 123
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 124 VLHRDLKPQNL 134
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 122
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 VLHRDLKPQNL 133
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 RVLHRDLKPQNL 134
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 RVLHRDLKPQNL 134
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 68 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 122 RVLHRDLKPQNL 133
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 122
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 VLHRDLKPQNL 133
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 314 GGFGSVYKGQ-LHTGGLIAVKMLKN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 371
G FG VYK Q T L A K++ S+ E+++ E+ + H N+V+LL +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 372 KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDI 431
++ E+ G++D + E + + ++ V T + YLH D I+H D+
Sbjct: 81 NLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 134
Query: 432 KPHNI 436
K NI
Sbjct: 135 KAGNI 139
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 68 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 121
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 122 RVLHRDLKPQNL 133
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGGL-IAVKMLKNSK-------FSAEEFINEVSTIGRIHHVNV 360
+LG G F V K + + GL A K +K + S EE EVS + ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+ L + ++ E + G L F ++ +S S E+ G+ YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 421 GCDVCILHFDIKPHNI 436
I HFD+KP NI
Sbjct: 134 K---KIAHFDLKPENI 146
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 RVLHRDLKPQNL 134
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 RVLHRDLKPQNL 134
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 74 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 127
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 128 VLHRDLKPQNL 138
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 RVLHRDLKPQNL 134
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 25/146 (17%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHE----------VALG 410
LLG C++ G V+ E+ G+L ++ + R + ++ L++ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L + + H D+ NI
Sbjct: 153 VAKGMEFLASRKXI---HRDLAARNI 175
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 123
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 124 VLHRDLKPQNL 134
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNI 179
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 72 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 126 RVLHRDLKPQNL 137
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 71 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 125 RVLHRDLKPQNL 136
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 ---IGITHRDIKPENL 135
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 70 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 124 RVLHRDLKPQNL 135
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 122
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 RVLHRDLKPENL 134
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 70 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 124 RVLHRDLKPQNL 135
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G +G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 IGITHRDIKPENL 135
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 71 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 125 RVLHRDLKPQNL 136
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G +G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 123
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 IGITHRDIKPENL 136
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNI 179
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 76 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 129
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 130 RVLHRDLKPQNL 141
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G +G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 IGITHRDIKPENL 135
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 122
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 VLHRDLKPQNL 133
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNI 170
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 ---IGITHRDIKPENL 136
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 124
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 125 VLHRDLKPQNL 135
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 ---IGITHRDIKPENL 135
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 9 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 121
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 122 ---IGITHRDIKPENL 134
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 70 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 123
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 124 RVLHRDLKPENL 135
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNI 179
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 10/146 (6%)
Query: 294 RYSYPEIIAMTNHFTHKLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE--FINEVS 350
R+ E I F LG G F V + T L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 351 TIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALG 410
+ +I H N+V L G ++ + + G L I K ++ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
++YLH D+ I+H D+KP N+
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENL 147
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G +G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 IGITHRDIKPENL 135
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 71 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 124
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 125 RVLHRDLKPENL 136
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G +G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 IGITHRDIKPENL 135
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 72 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 126 RVLHRDLKPQNL 137
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 ---IGITHRDIKPENL 136
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 24/147 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHI-----------FPKESRGQSFSWEKLHEVAL 409
LLG C++ G V+ E+ G+L ++ P++ + E L +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 410 GTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 156 QVAKGMEFL--ASRKCI-HRDLAARNI 179
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 312 GQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 371
+G FG V+K QL +AVK+ + + EV ++ + H N++Q +G G+
Sbjct: 33 ARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 372 KRAV----VYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLH-------N 420
V + + GSL + + SW +L +A ARG+ YLH +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 421 GCDVCILHFDIKPHNI 436
G I H DIK N+
Sbjct: 147 GHKPAISHRDIKSKNV 162
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 73 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 126
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 127 RVLHRDLKPQNL 138
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G +G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 IGITHRDIKPENL 135
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 76 DVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 129
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 130 RVLHRDLKPQNL 141
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 ---IGITHRDIKPENL 135
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 312 GQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 371
+G FG V+K QL +AVK+ + + E+ + + H N++Q + GS
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 372 KRAV----VYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC-- 425
V + + GSL ++ +G +W +L VA +RG+ YLH C
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 426 ------ILHFDIKPHNI 436
I H D K N+
Sbjct: 138 EGHKPSIAHRDFKSKNV 154
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNI 170
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGL------IAVKMLKNSKFSAEE--FINEVSTIGRI-H 356
F LG G FG V + G +AVKMLK++ + E+ ++E+ + +
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPK------ESRGQSFSWEKLHEVALG 410
H N+V LLG C+ G V+ EY G L + K + G+ L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+ +L CI H D+ N+
Sbjct: 161 VAQGMAFL--ASKNCI-HRDVAARNV 183
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNI 170
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 192 FQVAKGMEFL--ASRKCI-HRDLAARNI 216
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 ---IGITHRDIKPENL 135
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRH------------IFPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L + + P++ + E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNI 170
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGL------IAVKMLKNSKFSAEE--FINEVSTIGRI-H 356
F LG G FG V + G +AVKMLK++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPK------ESRGQSFSWEKLHEVALG 410
H N+V LLG C+ G V+ EY G L + K + G+ L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+ +L CI H D+ N+
Sbjct: 169 VAQGMAFL--ASKNCI-HRDVAARNV 191
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 307 FTHKLGQGGFGSVYKG---------QLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHH 357
F LGQG F ++KG QLH ++ + K + +E F S + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 358 VNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
++V G C G + +V E++ GSLD ++
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 ---IGITHRDIKPENL 136
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 ---IGITHRDIKPENL 136
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 ---IGITHRDIKPENL 136
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSAE----EFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L S+ E + E+ + H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 366 FCSEGSKRAVVYEYMPNG----SLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+ + + ++ E+ P G L +H E R +F E A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 131
Query: 422 CDVCILHFDIKPHNI 436
+ ++H DIKP N+
Sbjct: 132 -ERKVIHRDIKPENL 145
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 ---IGITHRDIKPENL 135
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHI------------FPKESRGQSFSWEKLHEVA 408
LLG C++ G V+ E+ G+L ++ P++ + E L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 409 LGTARGIEYLHNGCDVCILHFDIKPHNI 436
A+G+E+L CI H D+ NI
Sbjct: 157 FQVAKGMEFL--ASRKCI-HRDLAARNI 181
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 307 FTHKLGQGGFGSVYKGQL-----HTGGLIAVKMLKNSKFSAE-EFINEVSTIGRIHHVNV 360
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 361 VQLLGFCSEGSKRA---VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ G S G R +V EY+P+G L + +R +L + +G+EY
Sbjct: 71 VKYRGV-SYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEY 126
Query: 418 LHNGCDVCILHFDIKPHNI 436
L G C+ H D+ NI
Sbjct: 127 L--GSRRCV-HRDLAARNI 142
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 307 FTHKLGQGGFGSVYKG---------QLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHH 357
F LGQG F ++KG QLH ++ + K + +E F S + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 358 VNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
++V G C G + +V E++ GSLD ++
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYL 103
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 309 HKLGQGGFGSVYKGQLH-TGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G VYK + TG ++A+K ++ ++ I E+S + ++H N+V+LL
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+K +V+E++ D F S + +G+ + H+
Sbjct: 72 DVIHTENKLYLVFEHVDQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--- 125
Query: 425 CILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 126 RVLHRDLKPQNL 137
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 312 GQGGFGSVYKGQLHTGGL-IAVK-MLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF--- 366
GQG FG+V G+ + G+ +A+K ++++ +F E + + + +HH N+VQL +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 367 CSEGSKRA----VVYEYMPN-------GSLDRHIFPKESRGQSFSWEKLHEVALGTARGI 415
E +R VV EY+P+ R + P + F ++ + R I
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI--------RSI 142
Query: 416 EYLH-NGCDVCILHFDIKPHNI 436
LH +VC H DIKPHN+
Sbjct: 143 GCLHLPSVNVC--HRDIKPHNV 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSAE----EFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L S+ E + E+ + H N++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 366 FCSEGSKRAVVYEYMPNG----SLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+ + + ++ E+ P G L +H E R +F E A + Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 132
Query: 422 CDVCILHFDIKPHNI 436
+ ++H DIKP N+
Sbjct: 133 -ERKVIHRDIKPENL 146
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 311 LGQGGFGSVYKGQLHTGGLI-AVKMLKNSKFSAE----EFINEVSTIGRIHHVNVVQLLG 365
LG+G FG+VY + I A+K+L S+ E + E+ + H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 366 FCSEGSKRAVVYEYMPNG----SLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+ + + ++ E+ P G L +H E R +F E A + Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE--------LADALHYCH-- 131
Query: 422 CDVCILHFDIKPHNI 436
+ ++H DIKP N+
Sbjct: 132 -ERKVIHRDIKPENL 145
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 123
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 124 ---IGITHRDIKPENL 136
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 307 FTHKLGQGGFGSVYKGQLH----TGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNV 360
LG+G +G V QL T +AVK+ +K + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
V+ G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG 122
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 ---IGITHRDIKPENL 135
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 311 LGQGGFGSVYKGQLHTGGLIAV-KMLKNSKFSAEEFINEVSTIGRI-HHVNVVQLLGFC- 367
+G G FG V++ +L +A+ K+L++ +F E I RI H NVV L F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL-----QIMRIVKHPNVVDLKAFFY 102
Query: 368 SEGSKRAVVY-----EYMPNG--SLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
S G K+ V+ EY+P RH + K + KL+ L R + Y+H+
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQL--LRSLAYIHS 159
Query: 421 GCDVCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 160 ---IGICHRDIKPQNL 172
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K+L + EF++E + + H ++V+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C + + +V + MP+G L ++ K++ G L + A+G+ YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLE--- 134
Query: 423 DVCILHFDIKPHNI 436
+ ++H D+ N+
Sbjct: 135 ERRLVHRDLAARNV 148
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 311 LGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQLLGFC 367
+G GGF V + TG ++A+K++ + ++ E+ + + H ++ QL
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+K +V EY P G L +I ++ S E+ V + Y+H+
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYA 130
Query: 428 HFDIKPHNI 436
H D+KP N+
Sbjct: 131 HRDLKPENL 139
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 307 FTHKLGQGGFGSVYKGQL-----HTGGLIAVKMLKNSKFSAE-EFINEVSTIGRIHHVNV 360
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 361 VQLLGFCSEGSKRA---VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ G S G R +V EY+P+G L + +R +L + +G+EY
Sbjct: 87 VKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEY 142
Query: 418 LHNGCDVCILHFDIKPHNI 436
L G C+ H D+ NI
Sbjct: 143 L--GSRRCV-HRDLAARNI 158
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 309 HKLGQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 366
+LG G FG V++ + TG A K + S +E + E+ T+ + H +V L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ ++ ++YE+M G L + + ++ S ++ E +G+ ++H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQVCKGLCHMHEN---NY 276
Query: 427 LHFDIKPHNI 436
+H D+KP NI
Sbjct: 277 VHLDLKPENI 286
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 23/137 (16%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G V+K + TG ++A+K S+ + + E+ + ++ H N+V LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRG------QSFSWEKLHEVALGTARGIEYLH 419
+ +V+EY + L H + RG +S +W+ L V + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFC------HKH 121
Query: 420 NGCDVCILHFDIKPHNI 436
N CI H D+KP NI
Sbjct: 122 N----CI-HRDVKPENI 133
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
Query: 311 LGQGGFGSVY------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQ 362
LG+G FG V +G +TG +AVK LK + E+ + ++H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGD-NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 363 LLGFCSE--GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
G C+E G+ ++ E++P+GSL ++ PK + ++ + A+ +G++YL
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNK--NKINLKQQLKYAVQICKGMDYL 130
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 310 KLGQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
+LG G FG V++ + TG A K + S +E + E+ T+ + H +V L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
+ ++ ++YE+M G L + + ++ S ++ E +G+ ++H +
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDEAVEYMRQVCKGLCHMHEN---NYV 171
Query: 428 HFDIKPHNI 436
H D+KP NI
Sbjct: 172 HLDLKPENI 180
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 307 FTHKLGQGGFGSVYKGQL-----HTGGLIAVKMLKNSKFSAE-EFINEVSTIGRIHHVNV 360
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 361 VQLLGFCSEGSKRA---VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ G S G R +V EY+P+G L + +R +L + +G+EY
Sbjct: 74 VKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEY 129
Query: 418 LHNGCDVCILHFDIKPHNI 436
L G C+ H D+ NI
Sbjct: 130 L--GSRRCV-HRDLAARNI 145
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLG- 365
+LG G G V K Q GLI + L + + + I E+ + + +V G
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
F S+G + ++ E+M GSLD+ + KE++ E L +V++ RG+ YL
Sbjct: 83 FYSDG-EISICMEHMDGGSLDQVL--KEAK--RIPEEILGKVSIAVLRGLAYLREKHQ-- 135
Query: 426 ILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 136 IMHRDVKPSNI 146
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 309 HKLGQGGFG-SVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLL 364
K+G+G FG ++ G +K + S+ S+ EE EV+ + + H N+VQ
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
E +V +Y G L + I +G F +++ + + ++++H D
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVH---DR 144
Query: 425 CILHFDIKPHNI 436
ILH DIK NI
Sbjct: 145 KILHRDIKSQNI 156
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 307 FTHKLGQGGFGSVYKGQLH------TGGLIAVKMLKNSKF--SAEEFINEVSTIGRI-HH 357
F LG G FG V + + +AVKMLK S E ++E+ + + +H
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 358 VNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
+N+V LLG C+ G V+ EY G L
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDL 132
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
Query: 307 FTHKLGQGGFGSVYKGQL-----HTGGLIAVKMLKNSKFSAE-EFINEVSTIGRIHHVNV 360
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 361 VQLLGFCSEGSKRA---VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
V+ G S G R +V EY+P+G L + +R +L + +G+EY
Sbjct: 75 VKYRGV-SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEY 130
Query: 418 LHNGCDVCILHFDIKPHNI 436
L G C+ H D+ NI
Sbjct: 131 L--GSRRCV-HRDLAARNI 146
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 307 FTHKLGQGGFGSVYKGQLH------TGGLIAVKMLKNSKF--SAEEFINEVSTIGRI-HH 357
F LG G FG V + + +AVKMLK S E ++E+ + + +H
Sbjct: 43 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 358 VNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
+N+V LLG C+ G V+ EY G L
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDL 130
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLI--------AVKMLKNSKF--SAEEFINEVSTIGRI- 355
F LG G FG V + + GLI AVKMLK S E ++E+ + +
Sbjct: 27 FGKTLGAGAFGKVVEATAY--GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 356 HHVNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
+H+N+V LLG C+ G V+ EY G L
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDL 114
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K+L + EF++E + + H ++V+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C + + +V + MP+G L ++ K++ G L + A+G+ YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLE--- 157
Query: 423 DVCILHFDIKPHNI 436
+ ++H D+ N+
Sbjct: 158 ERRLVHRDLAARNV 171
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
Query: 311 LGQGGFGSVY------KGQLHTGGLIAVKMLKNSKFSAE--EFINEVSTIGRIHHVNVVQ 362
LG+G FG V +G +TG +AVK LK + E+ + ++H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGD-NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 363 LLGFCSE--GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYL 418
G C+E G+ ++ E++P+GSL ++ PK + ++ + A+ +G++YL
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNK--NKINLKQQLKYAVQICKGMDYL 142
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 307 FTHKLGQGGFGSVYKGQLH------TGGLIAVKMLKNSKF--SAEEFINEVSTIGRI-HH 357
F LG G FG V + + +AVKMLK S E ++E+ + + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 358 VNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
+N+V LLG C+ G V+ EY G L
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDL 137
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Query: 309 HKLGQGGFGSVYKGQLHTG-GLIAVKMLKNSKFSA--------------EEFINEVSTIG 353
KLG G +G V + G A+K++K S+F EE NE+S +
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 354 RIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
+ H N+++L + +V E+ G L I + + + + ++
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI----LS 157
Query: 414 GIEYLHNGCDVCILHFDIKPHNI 436
GI YLH I+H DIKP NI
Sbjct: 158 GICYLHKH---NIVHRDIKPENI 177
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + G L +++ ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 123
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 124 VLHRDLKPQNL 134
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G +G VYK + G L +++ ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+K +V+E++ D F S + +G+ + H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 122
Query: 426 ILHFDIKPHNI 436
+LH D+KP N+
Sbjct: 123 VLHRDLKPQNL 133
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGL------IAVKMLKNSKFSAEE--FINEVSTIGRI-H 356
F LG G FG V + G +AVKMLK++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
H N+V LLG C+ G V+ EY G L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 307 FTHKLGQGGFGSVYKGQLH------TGGLIAVKMLKNSKF--SAEEFINEVSTIGRI-HH 357
F LG G FG V + + +AVKMLK S E ++E+ + + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 358 VNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
+N+V LLG C+ G V+ EY G L
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDL 137
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGL------IAVKMLKNSKFSAEE--FINEVSTIGRI-H 356
F LG G FG V + G +AVKMLK++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
H N+V LLG C+ G V+ EY G L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDL 137
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG+G G V T +AVK+ +K + E E+ ++H NVV+
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G EG+ + + EY G L I P + + H++ G YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHG--- 122
Query: 424 VCILHFDIKPHNI 436
+ I H DIKP N+
Sbjct: 123 IGITHRDIKPENL 135
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 366
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPK-ESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
G + VV EY+ GSL + GQ + V + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN---Q 136
Query: 426 ILHFDIKPHNI 436
++H DIK NI
Sbjct: 137 VIHRDIKSDNI 147
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 21/134 (15%)
Query: 311 LGQGGFGSVYKGQLHTGGLIAVKML---KNSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
+G+G FG VY G+ H G +A++++ ++++ + F EV + H NVV +G C
Sbjct: 41 IGKGRFGQVYHGRWH--GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 368 SEGSKRAVVYEYMPNGSL-----DRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
A++ +L D I K ++A +G+ YLH
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIV--------LDVNKTRQIAQEIVKGMGYLHAK- 149
Query: 423 DVCILHFDIKPHNI 436
ILH D+K N+
Sbjct: 150 --GILHKDLKSKNV 161
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 366
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPK-ESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
G + VV EY+ GSL + GQ + V + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN---Q 136
Query: 426 ILHFDIKPHNI 436
++H DIK NI
Sbjct: 137 VIHRDIKSDNI 147
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGL------IAVKMLKNSKFSAEE--FINEVSTIGRI-H 356
F LG G FG V + G +AVKMLK++ + E+ ++E+ + +
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSL 385
H N+V LLG C+ G V+ EY G L
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDL 122
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 366
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPK-ESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
G + VV EY+ GSL + GQ + V + +E+LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN---Q 136
Query: 426 ILHFDIKPHNI 436
++H DIK NI
Sbjct: 137 VIHRDIKSDNI 147
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 366
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPK-ESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
G + VV EY+ GSL + GQ + V + +E+LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN---Q 137
Query: 426 ILHFDIKPHNI 436
++H DIK NI
Sbjct: 138 VIHRDIKSDNI 148
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 311 LGQGGFGSVYKG-QLHTGGLIAVKMLKNSKF------SAEEFINEVSTIGRIHHVNVVQL 363
+G+G F V + TG AVK++ +KF S E+ E S + H ++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
L S +V+E+M L I + G +S + Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 424 VCILHFDIKPHNI 436
I+H D+KP N+
Sbjct: 149 NNIIHRDVKPENV 161
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 299 EIIAMTNHFT--HKLGQGGFGSVYKGQL--HTGGLI--AVKMLKNSKFSA---EEFINEV 349
+++ FT LG+G FGSV + QL G + AVKMLK ++ EEF+ E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 350 STIGRIHHVNVVQLLGFCSEGSKRA------VVYEYMPNGSLDRHIFPKESR-GQ---SF 399
+ + H +V +L+G + V+ +M +G L H F SR G+ +
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL--HAFLLASRIGENPFNL 134
Query: 400 SWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHN 435
+ L + A G+EYL + +H D+ N
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARN 167
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 18/137 (13%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKM-----LKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
K+G+G F VY+ L G +A+K L ++K A+ I E+ + +++H NV++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKY 97
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHI--FPKESR--GQSFSWEKLHEVALGTARGIEYLH 419
E ++ +V E G L R I F K+ R + W+ V L +A +E++H
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF--VQLCSA--LEHMH 153
Query: 420 NGCDVCILHFDIKPHNI 436
+ ++H DIKP N+
Sbjct: 154 SR---RVMHRDIKPANV 167
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHI-------FPKESRGQSFSWEK 403
LLG C++ G V+ E+ G+L ++ P +++G F K
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGK 139
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHI-------FPKESRGQSFSWEK 403
LLG C++ G V+ E+ G+L ++ P +++G F K
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGK 137
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHI-------FPKESRGQSFSWEK 403
LLG C++ G V+ E+ G+L ++ P +++G F K
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGK 144
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 310 KLGQGGFGSVYKG-QLHTGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
KLG+G +G VYK T +A+K ++ + I EVS + + H N+++L
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY-LHNGCDV 424
+ +++EY N L +++ +K +V++ + Y L NG +
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYM------------DKNPDVSMRVIKSFLYQLINGVNF 147
Query: 425 C----ILHFDIKPHNI 436
C LH D+KP N+
Sbjct: 148 CHSRRCLHRDLKPQNL 163
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 17/110 (15%)
Query: 311 LGQGGFGSVYKG------QLHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRI-HHVNVV 361
LG+G FG V + + T +AVKMLK +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 362 QLLGFCSE-GSKRAVVYEYMPNGSLDRHI-------FPKESRGQSFSWEK 403
LLG C++ G V+ E+ G+L ++ P +++G F K
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGK 146
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSV-YKGQLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + H+G +AVKM+ K E + NEV + H NVV++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + V+ E++ G+L + + R + E++ V + + YLH ++
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV--SQVR---LNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 164 HRDIKSDSI 172
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 84 LGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 135
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 136 DRRLVHRDLAARNV 149
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C + + ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 138
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 139 DRRLVHRDLAARNV 152
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 311 LGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINE--VSTIGRIHHVNVVQLL---- 364
+G+G +G+VYKG L +AVK+ S + + FINE + + + H N+ + +
Sbjct: 21 IGRGRYGAVYKGSLDERP-VAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 365 GFCSEGSKR-AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC- 422
++G +V EY PNGSL +++ S W +A RG+ YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELP 132
Query: 423 -----DVCILHFDIKPHNI 436
I H D+ N+
Sbjct: 133 RGDHYKPAISHRDLNSRNV 151
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 310 KLGQGGFGSVYKGQLHTGGL-IAVKML----KNSKFSAEEFINEVSTIGRIHHVNVVQLL 364
KLG GG +VY + + +A+K + + + + + F EV ++ H N+V ++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
E +V EY+ +L +I ES G S + GI++ H D+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI---ESHG-PLSVDTAINFTNQILDGIKHAH---DM 130
Query: 425 CILHFDIKPHNI 436
I+H DIKP NI
Sbjct: 131 RIVHRDIKPQNI 142
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C + + ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 128
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 129 DRRLVHRDLAARNV 142
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 84 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 135
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 136 DRRLVHRDLAARNV 149
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 83 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 134
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 135 DRRLVHRDLAARNV 148
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 83 LGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 134
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 135 DRRLVHRDLAARNV 148
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 87 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 138
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 139 DRRLVHRDLAARNV 152
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 86 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 137
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 138 DRRLVHRDLAARNV 151
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 85 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 136
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 137 DRRLVHRDLAARNV 150
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C + + ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 144
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 145 DRRLVHRDLAARNV 158
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 273 TLQTVDNVEKFLHNQQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAV 332
TLQ +E FL +Q + E I+ +LG G G V+K GL+
Sbjct: 2 TLQQRKRLEAFLTQKQKVGELKDDDFEKIS-------ELGAGNGGVVFKVSHKPSGLVMA 54
Query: 333 KMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLG-FCSEGSKRAVVYEYMPNGSLDRH 388
+ L + + + I E+ + + +V G F S+G + ++ E+M GSLD+
Sbjct: 55 RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQ- 112
Query: 389 IFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ K R + L +V++ +G+ YL I+H D+KP NI
Sbjct: 113 VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNI 155
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 85 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 136
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 137 DRRLVHRDLAARNV 150
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 85 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 136
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 137 DRRLVHRDLAARNV 150
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 83 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 134
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 135 DRRLVHRDLAARNV 148
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 108 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 159
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 160 DRRLVHRDLAARNV 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 83 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 134
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 135 DRRLVHRDLAARNV 148
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 83 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 134
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 135 DRRLVHRDLAARNV 148
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 86 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 137
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 138 DRRLVHRDLAARNV 151
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 86 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 137
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 138 DRRLVHRDLAARNV 151
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 85 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 136
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 137 DRRLVHRDLAARNV 150
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 85 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 136
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 137 DRRLVHRDLAARNV 150
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 311 LGQGGFGSVYKGQL--HTGGLI--AVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
LG+G FG VY+G H G I AVK K + + E+F++E + + H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G E ++ E P G L ++ E S L +L + + YL + +
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLES---I 128
Query: 425 CILHFDIKPHNI 436
+H DI NI
Sbjct: 129 NCVHRDIAVRNI 140
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 86 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 137
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 138 DRRLVHRDLAARNV 151
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEE----FINEVSTIGRIHHVNV 360
KLG G FG V +G+ +AVK LK S E FI EV+ + + H N+
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
++L G + +V E P GSL + ++ +G F L A+ A G+ YL +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLES 133
Query: 421 GCDVCILHFDIKPHNI 436
+H D+ N+
Sbjct: 134 K---RFIHRDLAARNL 146
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 90 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 141
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 142 DRRLVHRDLAARNV 155
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 90 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 141
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 142 DRRLVHRDLAARNV 155
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 89 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 140
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 141 DRRLVHRDLAARNV 154
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 310 KLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEE----FINEVSTIGRIHHVNVV 361
KLG G FG V +G+ +AVK LK S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L G + +V E P GSL + ++ +G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 422 CDVCILHFDIKPHNI 436
+H D+ N+
Sbjct: 131 ---RFIHRDLAARNL 142
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 311 LGQGGFGSVYKG-QLHTGGLIAVKMLKNSKF------SAEEFINEVSTIGRIHHVNVVQL 363
+G+G F V + TG AVK++ +KF S E+ E S + H ++V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
L S +V+E+M L I + G +S + Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 424 VCILHFDIKPH 434
I+H D+KPH
Sbjct: 149 NNIIHRDVKPH 159
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 310 KLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEE----FINEVSTIGRIHHVNVV 361
KLG G FG V +G+ +AVK LK S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L G + +V E P GSL + ++ +G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 422 CDVCILHFDIKPHNI 436
+H D+ N+
Sbjct: 131 ---RFIHRDLAARNL 142
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 311 LGQGGFGSVYKGQL--HTGGLI--AVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
LG+G FG VY+G H G I AVK K + + E+F++E + + H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G E ++ E P G L ++ E S L +L + + YL + +
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLES---I 144
Query: 425 CILHFDIKPHNI 436
+H DI NI
Sbjct: 145 NCVHRDIAVRNI 156
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 311 LGQGGFGSVYKGQL--HTGGLI--AVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
LG+G FG VY+G H G I AVK K + + E+F++E + + H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G E ++ E P G L ++ E S L +L + + YL + +
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYLES---I 132
Query: 425 CILHFDIKPHNI 436
+H DI NI
Sbjct: 133 NCVHRDIAVRNI 144
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 310 KLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEE----FINEVSTIGRIHHVNVV 361
KLG G FG V +G+ +AVK LK S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L G + +V E P GSL + ++ +G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 422 CDVCILHFDIKPHNI 436
+H D+ N+
Sbjct: 131 ---RFIHRDLAARNL 142
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 306 HFTHKLGQGGFGSVY-KGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVN----- 359
H KLG G F +V+ + +A+K++K+++ E ++E+ + + + +
Sbjct: 24 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 83
Query: 360 ---VVQLLGFCS----EGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
VVQLL G+ +V+E + + L I +S Q + ++
Sbjct: 84 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII---KSNYQGLPLPCVKKIIQQVL 140
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
+G++YLH C I+H DIKP NI
Sbjct: 141 QGLDYLHTKCR--IIHTDIKPENI 162
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 57/142 (40%), Gaps = 12/142 (8%)
Query: 299 EIIAMTNHFTHKLGQGGFGSVYKGQLH-TGGLIAVKMLKNSKFSAEE--FINEVSTIGRI 355
E I F LG G F V + TG L AVK + +E NE++ + +I
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 356 HHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA-RG 414
H N+V L + +V + + G L I K F EK +
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK-----GFYTEKDASTLIRQVLDA 132
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ YLH + I+H D+KP N+
Sbjct: 133 VYYLHR---MGIVHRDLKPENL 151
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 310 KLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEE----FINEVSTIGRIHHVNVV 361
KLG G FG V +G+ +AVK LK S E FI EV+ + + H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L G + +V E P GSL + ++ +G F L A+ A G+ YL +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 134
Query: 422 CDVCILHFDIKPHNI 436
+H D+ N+
Sbjct: 135 ---RFIHRDLAARNL 146
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEE----FINEVSTIGRIHHVNV 360
KLG G FG V +G+ +AVK LK S E FI EV+ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
++L G + +V E P GSL + ++ +G F L A+ A G+ YL +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLES 139
Query: 421 GCDVCILHFDIKPHNI 436
+H D+ N+
Sbjct: 140 K---RFIHRDLAARNL 152
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F +G G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EYMP G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 366
K+GQG G+VY + TG +A++ + + +E I NE+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPK-ESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
G + VV EY+ GSL + GQ + V + +E+LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSN---Q 137
Query: 426 ILHFDIKPHNI 436
++H +IK NI
Sbjct: 138 VIHRNIKSDNI 148
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 311 LGQGGFGSVYKG-QLHTGGLIAVKMLKNSKF------SAEEFINEVSTIGRIHHVNVVQL 363
+G+G F V + TG AVK++ +KF S E+ E S + H ++V+L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
L S +V+E+M L I + G +S + Y H D
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 150
Query: 424 VCILHFDIKPH 434
I+H D+KPH
Sbjct: 151 NNIIHRDVKPH 161
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A G+ YL
Sbjct: 80 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAEGMNYLE--- 131
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 132 DRRLVHRDLAARNV 145
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 309 HKLGQGGFGSVYKGQLHTGG----LIAVKMLKNSKFSAEE----FINEVSTIGRIHHVNV 360
KLG G FG V +G+ +AVK LK S E FI EV+ + + H N+
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
++L G + +V E P GSL + ++ +G F L A+ A G+ YL +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLES 139
Query: 421 GCDVCILHFDIKPHNI 436
+H D+ N+
Sbjct: 140 K---RFIHRDLAARNL 152
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F +G G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EYMP G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 31/142 (21%)
Query: 309 HKLGQGGFGSVYKGQ-LHTGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G+V+K + T ++A+K ++ + + + E+ + + H N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 365 GFCSEGSKRAVVYEYMP----------NGSLDRHIFPKESRGQSFSWEKLHEVALGTARG 414
K +V+E+ NG LD I +SF ++ L +G
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLL--------KG 113
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + H+ +LH D+KP N+
Sbjct: 114 LGFCHSR---NVLHRDLKPQNL 132
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 306 HFTHKLGQGGFGSVY-KGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVN----- 359
H KLG G F +V+ + +A+K++K+++ E ++E+ + + + +
Sbjct: 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 99
Query: 360 ---VVQLLGFCS----EGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
VVQLL G+ +V+E + + L I +S Q + ++
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII---KSNYQGLPLPCVKKIIQQVL 156
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
+G++YLH C I+H DIKP NI
Sbjct: 157 QGLDYLHTKCR--IIHTDIKPENI 178
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 31/142 (21%)
Query: 309 HKLGQGGFGSVYKGQ-LHTGGLIAVKMLK---NSKFSAEEFINEVSTIGRIHHVNVVQLL 364
K+G+G +G+V+K + T ++A+K ++ + + + E+ + + H N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 365 GFCSEGSKRAVVYEYMP----------NGSLDRHIFPKESRGQSFSWEKLHEVALGTARG 414
K +V+E+ NG LD I +SF ++ L +G
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLL--------KG 113
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + H+ +LH D+KP N+
Sbjct: 114 LGFCHSR---NVLHRDLKPQNL 132
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
+LG+G +G V K + + +G ++AVK ++ + S E+ ++ ++ + V G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ E M + SLD+ +GQ+ + L ++A+ + +E+LH+ +
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 130
Query: 426 ILHFDIKPHNI 436
++H D+KP N+
Sbjct: 131 VIHRDVKPSNV 141
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLGF 366
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ ++ E+M GSLD+ + K R + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 427 LHFDIKPHNI 436
+H D+KP NI
Sbjct: 127 MHRDVKPSNI 136
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLGF 366
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ ++ E+M GSLD+ + K R + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 427 LHFDIKPHNI 436
+H D+KP NI
Sbjct: 127 MHRDVKPSNI 136
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLGF 366
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ ++ E+M GSLD+ + K R + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 427 LHFDIKPHNI 436
+H D+KP NI
Sbjct: 127 MHRDVKPSNI 136
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLGF 366
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ ++ E+M GSLD+ + K R + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 427 LHFDIKPHNI 436
+H D+KP NI
Sbjct: 127 MHRDVKPSNI 136
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLGF 366
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ ++ E+M GSLD+ + K R + L +V++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 427 LHFDIKPHNI 436
+H D+KP NI
Sbjct: 127 MHRDVKPSNI 136
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 311 LGQGGFGSVY-----KGQLHTGGLIAVKMLKNSKFSA--EEFINEVSTIGRIHHVNVVQL 363
LG+G FG V TG ++AVK LK + E+ + ++H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 364 LGFCSEGSKRAV--VYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
G C + +++V V EY+P GSL R P+ G + +L A G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLA----QLLLFAQQICEGMAYLH 128
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 311 LGQGGFGSVY-----KGQLHTGGLIAVKMLKNSKFSA--EEFINEVSTIGRIHHVNVVQL 363
LG+G FG V TG ++AVK LK + E+ + ++H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 364 LGFCSEGSKRAV--VYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
G C + +++V V EY+P GSL R P+ G + +L A G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLA----QLLLFAQQICEGMAYLH 129
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 15/165 (9%)
Query: 280 VEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVKML 335
V++FL + K++ P + A + F LG G FG V + TG A+K+L
Sbjct: 1 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 60
Query: 336 KNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFP 391
K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 61 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 118
Query: 392 KESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 119 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 158
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE---FINEVSTIGRIHHVNVVQLLG 365
+LG+G +G V K + + +G ++AVK ++ + S E+ ++ ++ + V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ E M + SLD+ +GQ+ + L ++A+ + +E+LH+ +
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 174
Query: 426 ILHFDIKPHNI 436
++H D+KP N+
Sbjct: 175 VIHRDVKPSNV 185
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 33/160 (20%)
Query: 306 HFTHKLGQGGFGSVYK----GQLHTGGLI--AVKMLKNSKFSAEE--FINEVSTIGRI-H 356
F LG G FG V G TG I AVKMLK S+E ++E+ + ++
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQS------------------ 398
H N+V LLG C+ +++EY G L ++ K +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 399 -FSWEKLHEVALGTARGIEYLH-NGCDVCILHFDIKPHNI 436
++E L A A+G+E+L C +H D+ N+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNV 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKML----KNSKFSAEEFINEVSTIGRIHHVNVVQLL 364
++G G FG+VY + + ++A+K + K S ++ I EV + ++ H N +Q
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G +V EY + D E + ++ V G +G+ YLH+
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDL----LEVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 134
Query: 425 CILHFDIKPHNI 436
++H D+K NI
Sbjct: 135 NMIHRDVKAGNI 146
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLGF 366
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ ++ E+M GSLD+ + K R + L +V++ +G+ YL I
Sbjct: 76 FYSDGEISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK--I 129
Query: 427 LHFDIKPHNI 436
+H D+KP NI
Sbjct: 130 MHRDVKPSNI 139
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
LG G FG+VYKG G +A+ L+ S + +E ++E + + + +V +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C + + ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 168
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 169 DRRLVHRDLAARNV 182
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
L G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C + + ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 134
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 135 DRRLVHRDLAARNV 148
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLG- 365
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
F S+G + ++ E+M GSLD+ + K R + L +V++ +G+ YL
Sbjct: 135 FYSDG-EISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK-- 187
Query: 426 ILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 188 IMHRDVKPSNI 198
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
L G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 90 LGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 141
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 142 DRRLVHRDLAARNV 155
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + + G L+AVK + K E + NEV + H NVV++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + VV E++ G+L + + E++ V L + + LH ++
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 138
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 139 HRDIKSDSI 147
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSA---EEFINEVSTIGRIHHVNVVQLLG- 365
+LG G G V+K GL+ + L + + + I E+ + + +V G
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
F S+G + ++ E+M GSLD+ + K R + L +V++ +G+ YL
Sbjct: 100 FYSDG-EISICMEHMDGGSLDQ-VLKKAGR---IPEQILGKVSIAVIKGLTYLREKHK-- 152
Query: 426 ILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 153 IMHRDVKPSNI 163
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 311 LGQGGFGSVYKGQLHTGG-----LIAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQL 363
L G FG+VYKG G +A+K L+ S + +E ++E + + + +V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFP-KESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
LG C S ++ + MP G L ++ K++ G + L + A+G+ YL
Sbjct: 90 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQY----LLNWCVQIAKGMNYLE--- 141
Query: 423 DVCILHFDIKPHNI 436
D ++H D+ N+
Sbjct: 142 DRRLVHRDLAARNV 155
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + + G L+AVK + K E + NEV + H NVV++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + VV E++ G+L + + E++ V L + + LH ++
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 147
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 148 HRDIKSDSI 156
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKML----KNSKFSAEEFINEVSTIGRIHHVNVVQLL 364
++G G FG+VY + + ++A+K + K S ++ I EV + ++ H N +Q
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
G +V EY + D E + ++ V G +G+ YLH+
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDL----LEVHKKPLQEVEIAAVTHGALQGLAYLHSH--- 173
Query: 425 CILHFDIKPHNI 436
++H D+K NI
Sbjct: 174 NMIHRDVKAGNI 185
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 15/166 (9%)
Query: 279 NVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVKM 334
+V++FL + K++ P + A + F LG G FG V TG A+K+
Sbjct: 7 DVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI 66
Query: 335 LKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIF 390
L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 67 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 391 PKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 126 ---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 165
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F +G G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + + G L+AVK + K E + NEV + H NVV++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + VV E++ G+L + +R + E++ V L + + LH ++
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV--THTR---MNEEQIAAVCLAVLQALSVLHAQ---GVI 142
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 143 HRDIKSDSI 151
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + + G L+AVK + K E + NEV + H NVV++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + VV E++ G+L + + E++ V L + + LH ++
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 149
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 150 HRDIKSDSI 158
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 310 KLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLGF 366
++G+G FG VYKG HT ++A+K+ L+ ++ E+ E++ + + + + G
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+ +K ++ EY+ GS + P +++ L E+ +G++YLH+ +
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGPLE-ETYIATILREI----LKGLDYLHSERKI-- 138
Query: 427 LHFDIKPHNI 436
H DIK N+
Sbjct: 139 -HRDIKAANV 147
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 301 IAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNV 360
IA T +G+G FG V++G+ G +AVK+ + + + E+ + H N+
Sbjct: 40 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 98
Query: 361 VQLLGFCSEGSKRA-------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
LGF + +K +V +Y +GSL F +R + + E + ++AL TA
Sbjct: 99 ---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTAS 150
Query: 414 GIEYLH-----NGCDVCILHFDIKPHNI 436
G+ +LH I H D+K NI
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNI 178
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
++G+G FG V+KG T ++A+K+ L+ ++ E+ E++ + + V + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 366 FCSEGSKRAVVYEYMPNGS-LDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+GSK ++ EY+ GS LD R F ++ + +G++YLH+ +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL------RAGPFDEFQIATMLKEILKGLDYLHSEKKI 142
Query: 425 CILHFDIKPHNI 436
H DIK N+
Sbjct: 143 ---HRDIKAANV 151
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 301 IAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNV 360
IA T +G+G FG V++G+ G +AVK+ + + + E+ + H N+
Sbjct: 2 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 60
Query: 361 VQLLGFCSEGSKRA-------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
LGF + +K +V +Y +GSL F +R + + E + ++AL TA
Sbjct: 61 ---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTAS 112
Query: 414 GIEYLH-----NGCDVCILHFDIKPHNI 436
G+ +LH I H D+K NI
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNI 140
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 301 IAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNV 360
IA T +G+G FG V++G+ G +AVK+ + + + E+ + H N+
Sbjct: 27 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 85
Query: 361 VQLLGFCSEGSKRA-------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
LGF + +K +V +Y +GSL F +R + + E + ++AL TA
Sbjct: 86 ---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTAS 137
Query: 414 GIEYLH-----NGCDVCILHFDIKPHNI 436
G+ +LH I H D+K NI
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNI 165
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 301 IAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNV 360
IA T +G+G FG V++G+ G +AVK+ + + + E+ + H N+
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 59
Query: 361 VQLLGFCSEGSKRA-------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
LGF + +K +V +Y +GSL F +R + + E + ++AL TA
Sbjct: 60 ---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTAS 111
Query: 414 GIEYLH-----NGCDVCILHFDIKPHNI 436
G+ +LH I H D+K NI
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNI 139
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 301 IAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNV 360
IA T +G+G FG V++G+ G +AVK+ + + + E+ + H N+
Sbjct: 7 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 65
Query: 361 VQLLGFCSEGSKRA-------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
LGF + +K +V +Y +GSL F +R + + E + ++AL TA
Sbjct: 66 ---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTAS 117
Query: 414 GIEYLH-----NGCDVCILHFDIKPHNI 436
G+ +LH I H D+K NI
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNI 145
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 31/145 (21%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVK--MLKNSKFSAEEF----INEVSTIGRIHHVNVVQ 362
K+GQG FG V+K + TG +A+K +++N K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 363 LLGFCSEGSK-----RAVVY------EYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGT 411
L+ C + +A +Y E+ G L + F+ ++ V
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQML 134
Query: 412 ARGIEYLHNGCDVCILHFDIKPHNI 436
G+ Y+H ILH D+K N+
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANV 156
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 301 IAMTNHFTHKLGQGGFGSVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNV 360
IA T +G+G FG V++G+ G +AVK+ + + + E+ + H N+
Sbjct: 4 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI 62
Query: 361 VQLLGFCSEGSKRA-------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTAR 413
LGF + +K +V +Y +GSL F +R + + E + ++AL TA
Sbjct: 63 ---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLALSTAS 114
Query: 414 GIEYLH-----NGCDVCILHFDIKPHNI 436
G+ +LH I H D+K NI
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNI 142
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ + +L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ + +L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEE--FINEVSTIGRIHHVNVVQLLGF 366
+LG+G +G V K + + +G + AVK ++ + S E+ + ++ R V+ + F
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRT--VDCPFTVTF 98
Query: 367 CSEGSKRAVVY--EYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+ V+ + + SLD+ +GQ+ + L ++A+ + +E+LH+ +
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KL 156
Query: 425 CILHFDIKPHNI 436
++H D+KP N+
Sbjct: 157 SVIHRDVKPSNV 168
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 93
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 153
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 154 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 193
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 267 IHKYRTTLQTVDNVEKFLHNQQSW-MPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKG--- 322
+ + ++ D+ + + + ++ MP Y EI +G+G FG V++G
Sbjct: 354 VRSHTVSVSETDDYAEIIDEEDTYTMPSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYM 412
Query: 323 -QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+ +A+K KN S E+F+ E T+ + H ++V+L+G +E
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 267 IHKYRTTLQTVDNVEKFLHNQQSW-MPKRYSYPEIIAMTNHFTHKLGQGGFGSVYKG--- 322
+ + ++ D+ + + + ++ MP Y EI +G+G FG V++G
Sbjct: 354 VRSHTVSVSETDDYAEIIDEEDTYTMPSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYM 412
Query: 323 -QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+ +A+K KN S E+F+ E T+ + H ++V+L+G +E
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE 462
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + + G L+AVK + K E + NEV + H NVV++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + VV E++ G+L + + E++ V L + + LH ++
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 192
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 193 HRDIKSDSI 201
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 310 KLGQGGFGSVYKGQLHTGG-LIAVKMLKNSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 367
K+G+G G V + + G L+AVK + K E + NEV + H NVV++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 368 SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCIL 427
G + VV E++ G+L + + E++ V L + + LH ++
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVI 269
Query: 428 HFDIKPHNI 436
H DIK +I
Sbjct: 270 HRDIKSDSI 278
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLK--NSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 367
LG+GGFG V++ + A+K ++ N + + E+ + EV + ++ H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 368 SEGSKRAVVYEYMPNGSL--DRHIFPKES-----RGQSFSWEKLHEVA----LGTARGIE 416
E + + P L + KE+ G+ E+ V L A +E
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 417 YLHNGCDVCILHFDIKPHNI 436
+LH+ ++H D+KP NI
Sbjct: 133 FLHSK---GLMHRDLKPSNI 149
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 306 HFTHKLGQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVN----- 359
H KLG G F +V+ + +A+K++K+++ E ++E+ + + +
Sbjct: 34 HVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSDPN 93
Query: 360 ---VVQLLGFCS----EGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTA 412
VVQL+ G +V+E + + L I +S Q + +
Sbjct: 94 KDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWII---KSNYQGLPVRCVKSIIRQVL 150
Query: 413 RGIEYLHNGCDVCILHFDIKPHNI 436
+G++YLH+ C I+H DIKP NI
Sbjct: 151 QGLDYLHSKCK--IIHTDIKPENI 172
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 279 NVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVKM 334
+V++FL + K++ P + A + F LG G FG V TG A+K+
Sbjct: 7 DVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI 66
Query: 335 LKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIF 390
L K E +NE + ++ +V+L + S +V EY+P G + H+
Sbjct: 67 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 391 PKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 126 ---RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 165
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 303 MTNHFTHKLGQGGFGSVYKG----QLHTGGLIAVKMLK--NSKFSAEEFINEVSTIGRIH 356
+ H +G+G FG VY G Q A+K L E F+ E + ++
Sbjct: 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 357 HVNVVQLLGFC--SEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARG 414
H NV+ L+G EG V+ YM +G L + I S ++ + + L L ARG
Sbjct: 81 HPNVLALIGIMLPPEGLPH-VLLPYMCHGDLLQFI---RSPQRNPTVKDLISFGLQVARG 136
Query: 415 IEYLHNGCDVCILHFDIKPHN 435
+EYL + +H D+ N
Sbjct: 137 MEYL---AEQKFVHRDLAARN 154
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVK--MLKNSKFSAEEF----INEVSTIGRIHHVNVVQ 362
K+GQG FG V+K + TG +A+K +++N K E F + E+ + + H NVV
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 80
Query: 363 LLGFC 367
L+ C
Sbjct: 81 LIEIC 85
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSE 369
G +E
Sbjct: 78 GVITE 82
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVK--MLKNSKFSAEEF----INEVSTIGRIHHVNVVQ 362
K+GQG FG V+K + TG +A+K +++N K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 363 LLGFC 367
L+ C
Sbjct: 82 LIEIC 86
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSE 369
G +E
Sbjct: 78 GVITE 82
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSE 369
G +E
Sbjct: 78 GVITE 82
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 310 KLGQGGFGSVYKGQ-LHTGGLIAVK--MLKNSKFSAEEF----INEVSTIGRIHHVNVVQ 362
K+GQG FG V+K + TG +A+K +++N K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 363 LLGFC 367
L+ C
Sbjct: 82 LIEIC 86
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 343 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSL---DRHIFPKESRGQSF 399
++F NE+ I I + + G + + ++YEYM N S+ D + F + F
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 400 -SWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ + + Y+HN ++C H D+KP NI
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNI 183
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 365 GFCSE 369
G +E
Sbjct: 78 GVITE 82
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 365 GFCSE 369
G +E
Sbjct: 75 GVITE 79
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 365 GFCSE 369
G +E
Sbjct: 106 GVITE 110
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 365 GFCSE 369
G +E
Sbjct: 80 GVITE 84
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 365 GFCSE 369
G +E
Sbjct: 83 GVITE 87
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 306 HFTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
+LG GGFG V + TG +A+K + S + E + E+ + +++H NVV
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 363 LLGFCSEGSKRA------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
K A + EY G L +++ E+ + + + +
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALR 136
Query: 417 YLHNGCDVCILHFDIKPHNI 436
YLH I+H D+KP NI
Sbjct: 137 YLHENR---IIHRDLKPENI 153
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 311 LGQGGFGSVYKG----QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQLL 364
+G+G FG V++G + +A+K KN S E+F+ E T+ + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 365 GFCSE 369
G +E
Sbjct: 81 GVITE 85
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 13/140 (9%)
Query: 306 HFTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKN--SKFSAEEFINEVSTIGRIHHVNVVQ 362
+LG GGFG V + TG +A+K + S + E + E+ + +++H NVV
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 363 LLGFCSEGSKRA------VVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
K A + EY G L +++ E+ + + + +
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALR 135
Query: 417 YLHNGCDVCILHFDIKPHNI 436
YLH I+H D+KP NI
Sbjct: 136 YLHENR---IIHRDLKPENI 152
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ + +L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 259 PIVFLVFLIHKYRTTLQTVDNVEKFLHNQQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGS 318
P ++ + L K R + N + +Q S++ + + +A +G+G FG
Sbjct: 56 PEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDH---VAYRYEVLKVIGKGSFGQ 112
Query: 319 VYKGQLH-TGGLIAVKMLKNSKFSAEEFINEVSTIGRIHH------VNVVQLLGFCSEGS 371
V K H +A+KM++N K + E+ + + +NV+ +L + +
Sbjct: 113 VVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172
Query: 372 KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDI 431
+ +E + S++ + K+++ Q FS + + A + ++ LH I+H D+
Sbjct: 173 HICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDL 226
Query: 432 KPHNI 436
KP NI
Sbjct: 227 KPENI 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE ++ +V+L + S +V EY P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 20/140 (14%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV----------- 358
LGQG FG V K + A+K +++++ ++EV + ++H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 359 --NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
N V+ + + S + EY NG+L I + Q + +L L +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL---EALS 130
Query: 417 YLHNGCDVCILHFDIKPHNI 436
Y+H+ I+H D+KP NI
Sbjct: 131 YIHSQ---GIIHRDLKPMNI 147
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 259 PIVFLVFLIHKYRTTLQTVDNVEKFLHNQQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGS 318
P ++ + L K R + N + +Q S++ + + +A +G+G FG
Sbjct: 56 PEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDH---VAYRYEVLKVIGKGSFGQ 112
Query: 319 VYKGQLH-TGGLIAVKMLKNSKFSAEEFINEVSTIGRIHH------VNVVQLLGFCSEGS 371
V K H +A+KM++N K + E+ + + +NV+ +L + +
Sbjct: 113 VVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172
Query: 372 KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDI 431
+ +E + S++ + K+++ Q FS + + A + ++ LH I+H D+
Sbjct: 173 HICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDL 226
Query: 432 KPHNI 436
KP NI
Sbjct: 227 KPENI 231
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AVK++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V EY G + ++ + + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI----VSAVQYCHQK---FI 134
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 135 VHRDLKAENL 144
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AVK++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V EY G + ++ + + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI----VSAVQYCHQK---FI 134
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 135 VHRDLKAENL 144
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 311 LGQGGFGSVYKGQ----LHTGGLIAVKMLK------NSKFSAEEFINEVSTIGRIHHVNV 360
LG+GG+G V++ + +TG + A+K+LK N+K +A E + + + H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA-ERNILEEVKHPFI 83
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEK----LHEVALGTARGIE 416
V L+ G K ++ EY+ G L F + R F + L E+++ +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISM----ALG 135
Query: 417 YLHNGCDVCILHFDIKPHNI 436
+LH I++ D+KP NI
Sbjct: 136 HLHQK---GIIYRDLKPENI 152
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AVK++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V EY G + ++ + + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI----VSAVQYCHQK---FI 134
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 135 VHRDLKAENL 144
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 26/140 (18%)
Query: 311 LGQGGFGSVYKGQ----LHTGGLIAVKMLK------NSKFSAEEFINEVSTIGRIHHVNV 360
LG+GG+G V++ + +TG + A+K+LK N+K +A E + + + H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA-ERNILEEVKHPFI 83
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEK----LHEVALGTARGIE 416
V L+ G K ++ EY+ G L F + R F + L E+++ +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISM----ALG 135
Query: 417 YLHNGCDVCILHFDIKPHNI 436
+LH I++ D+KP NI
Sbjct: 136 HLHQK---GIIYRDLKPENI 152
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 259 PIVFLVFLIHKYRTTLQTVDNVEKFLHNQQSWMPKRYSYPEIIAMTNHFTHKLGQGGFGS 318
P ++ + L K R + N + +Q S++ + + +A +G+G FG
Sbjct: 56 PEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDH---VAYRYEVLKVIGKGXFGQ 112
Query: 319 VYKGQLH-TGGLIAVKMLKNSKFSAEEFINEVSTIGRIHH------VNVVQLLGFCSEGS 371
V K H +A+KM++N K + E+ + + +NV+ +L + +
Sbjct: 113 VVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172
Query: 372 KRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDI 431
+ +E + S++ + K+++ Q FS + + A + ++ LH I+H D+
Sbjct: 173 HICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDL 226
Query: 432 KPHNI 436
KP NI
Sbjct: 227 KPENI 231
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 301 IAMTNHFTHKL-GQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
+ M + H++ G+GGFG VY + TG + A+K L + ++ G +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 237
Query: 359 NVVQLLGFCSEG---------------SKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEK 403
N +L S G K + + + M G L H+ S+ FS
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 293
Query: 404 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ A G+E++HN +++ D+KP NI
Sbjct: 294 MRFYAAEIILGLEHMHNR---FVVYRDLKPANI 323
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 301 IAMTNHFTHKL-GQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
+ M + H++ G+GGFG VY + TG + A+K L + ++ G +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 237
Query: 359 NVVQLLGFCSEG---------------SKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEK 403
N +L S G K + + + M G L H+ S+ FS
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 293
Query: 404 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ A G+E++HN +++ D+KP NI
Sbjct: 294 MRFYAAEIILGLEHMHNR---FVVYRDLKPANI 323
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 301 IAMTNHFTHKL-GQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
+ M + H++ G+GGFG VY + TG + A+K L + ++ G +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 237
Query: 359 NVVQLLGFCSEG---------------SKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEK 403
N +L S G K + + + M G L H+ S+ FS
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 293
Query: 404 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ A G+E++HN +++ D+KP NI
Sbjct: 294 MRFYAAEIILGLEHMHN---RFVVYRDLKPANI 323
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 301 IAMTNHFTHKL-GQGGFGSVYK-GQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV 358
+ M + H++ G+GGFG VY + TG + A+K L + ++ G +
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLAL 236
Query: 359 NVVQLLGFCSEG---------------SKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEK 403
N +L S G K + + + M G L H+ S+ FS
Sbjct: 237 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD 292
Query: 404 LHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+ A G+E++HN +++ D+KP NI
Sbjct: 293 MRFYAAEIILGLEHMHN---RFVVYRDLKPANI 322
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AVK++ ++ S ++ EV + ++H N+V+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 367 CSEGSKRAVVYEYMPNGS----LDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
+V EY G L H + KE ++ K ++ ++Y H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARA----KFRQI----VSAVQYCHQK- 125
Query: 423 DVCILHFDIKPHNI 436
I+H D+K N+
Sbjct: 126 --FIVHRDLKAENL 137
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G FG V+KG T ++A+K+ L+ ++ E+ E++ + + V + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGT-----ARGIEYLHN 420
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 142
Query: 421 GCDVCILHFDIKPHNI 436
+ H DIK N+
Sbjct: 143 EKKI---HRDIKAANV 155
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 311 LGQGGFGSVYKGQLH-TGGLIAVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+GGFG V+ Q+ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ +V M G + HI+ + F + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 426 ILHFDIKPHNI 436
I++ D+KP N+
Sbjct: 310 IIYRDLKPENV 320
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G FG V+KG T ++A+K+ L+ ++ E+ E++ + + V + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGT-----ARGIEYLHN 420
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 122
Query: 421 GCDVCILHFDIKPHNI 436
+ H DIK N+
Sbjct: 123 EKKI---HRDIKAANV 135
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 145
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 146 SNFVHRDLAARNV 158
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 145
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 146 SNFVHRDLAARNV 158
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G FG V+KG T ++A+K+ L+ ++ E+ E++ + + V + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGT-----ARGIEYLHN 420
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 122
Query: 421 GCDVCILHFDIKPHNI 436
+ H DIK N+
Sbjct: 123 EKKI---HRDIKAANV 135
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AV+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V EY G + ++ + + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI----VSAVQYCHQK---FI 134
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 135 VHRDLKAENL 144
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 309 HKLGQGGFGSVYKG-QLHTGGLIAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLG 365
K+G+G FG V+KG T ++A+K+ L+ ++ E+ E++ + + V + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGT-----ARGIEYLHN 420
+ +K ++ EY+ GS + P L E + T +G++YLH+
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 137
Query: 421 GCDVCILHFDIKPHNI 436
+ H DIK N+
Sbjct: 138 EKKI---HRDIKAANV 150
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 127 G---IIHRDLKPENI 138
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 129 G---IIHRDLKPENI 140
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 130 G---IIHRDLKPENI 141
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 128 G---IIHRDLKPENI 139
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AV+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V EY G + ++ + + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI----VSAVQYCHQK---FI 134
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 135 VHRDLKAENL 144
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 125
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 126 SNFVHRDLAARNV 138
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 311 LGQGGFGSVYKGQLH-TGGLIAVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+GGFG V+ Q+ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ +V M G + HI+ + F + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 426 ILHFDIKPHNI 436
I++ D+KP N+
Sbjct: 310 IIYRDLKPENV 320
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 311 LGQGGFGSVYKGQLH-TGGLIAVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+GGFG V+ Q+ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ +V M G + HI+ + F + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 426 ILHFDIKPHNI 436
I++ D+KP N+
Sbjct: 310 IIYRDLKPENV 320
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 73
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 133
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 173
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 8/131 (6%)
Query: 311 LGQGGFGSVYKGQLH-TGGLIAVKMLKNSKFSA----EEFINEVSTIGRIHHVNVVQLLG 365
LG+GGFG V+ Q+ TG L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ +V M G + HI+ + F + G+E+LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 426 ILHFDIKPHNI 436
I++ D+KP N+
Sbjct: 310 IIYRDLKPENV 320
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AVK++ ++ S ++ EV + ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V EY G + ++ + + K ++ ++Y H I
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI----VSAVQYCHQK---YI 135
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 136 VHRDLKAENL 145
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 129
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 130 SNFVHRDLAARNV 142
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 149 G---IIHRDLKPENI 160
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 134 G---IIHRDLKPENI 145
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 143
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 144 SNFVHRDLAARNV 156
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 149 G---IIHRDLKPENI 160
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +AVK++ ++ S ++ EV ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
+V EY G + ++ + + K ++ ++Y H I
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI----VSAVQYCHQK---FI 134
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 135 VHRDLKAENL 144
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 123
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 124 SNFVHRDLAARNV 136
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 347 NEVSTIGRIHHVNVVQLLG--FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKL 404
E+ + R+ H NV+QL+ + E K +V EY G + E R F +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR---FPVCQA 111
Query: 405 HEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
H G+EYLH+ I+H DIKP N+
Sbjct: 112 HGYFCQLIDGLEYLHS---QGIVHKDIKPGNL 140
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 279 NVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVKM 334
+V++FL + K++ P + A + F LG G FG V +G A+K+
Sbjct: 1 SVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI 60
Query: 335 LKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIF 390
L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 61 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL- 119
Query: 391 PKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 120 ---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 159
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 135
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 136 SNFVHRDLAARNV 148
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 129
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 130 SNFVHRDLAARNV 142
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 154 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R FS A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 150 G---IIHRDLKPENI 161
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 150 G---IIHRDLKPENI 161
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 307 FTHKLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVN------ 359
KLG G F +V+ + + +A+K+++ K E +E+ + R++ +
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 360 -----VVQLLGFCSEGSKRAV----VYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALG 410
+++LL + V V+E + L I E RG + K +++
Sbjct: 83 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL-IKKYEHRGIPLIYVK--QISKQ 139
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
G++Y+H C I+H DIKP N+
Sbjct: 140 LLLGLDYMHRRC--GIIHTDIKPENV 163
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +A+K++ ++ S ++ EV + ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
++ EY G + ++ + + K ++ ++Y H I
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI----VSAVQYCHQK---RI 135
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 136 VHRDLKAENL 145
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 150 G---IIHRDLKPENI 161
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 152 G---IIHRDLKPENI 163
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 307 FTHKLGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVN------ 359
KLG G F +V+ + + +A+K+++ K E +E+ + R++ +
Sbjct: 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDS 82
Query: 360 -----VVQLLGFCSEGSKRAV----VYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALG 410
+++LL + V V+E + L I E RG + K +++
Sbjct: 83 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL-IKKYEHRGIPLIYVK--QISKQ 139
Query: 411 TARGIEYLHNGCDVCILHFDIKPHNI 436
G++Y+H C I+H DIKP N+
Sbjct: 140 LLLGLDYMHRRC--GIIHTDIKPENV 163
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 307 FTHKLGQGGFG--SVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLL 364
F +G G FG + + +L T L+AVK ++ E E+ + H N+V+
Sbjct: 24 FVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 365 GFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDV 424
+ A++ EY G L + + FS ++ G+ Y H+ +
Sbjct: 83 EVILTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLSGVSYCHS---M 135
Query: 425 CILHFDIKPHN 435
I H D+K N
Sbjct: 136 QICHRDLKLEN 146
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGS-VYKGQLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F + V +L T A+K+L+ E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 149
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 150 G---IIHRDLKPENI 161
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 330 IAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGS-LD 386
+A+K L+ + S +E + E+ + + HH N+V + +V + + GS LD
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 387 --RHIFPK-ESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+HI K E + + + G+EYLH + H D+K NI
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNI 147
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 152 G---IIHRDLKPENI 163
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 330 IAVKM--LKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGS-LD 386
+A+K L+ + S +E + E+ + + HH N+V + +V + + GS LD
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 387 --RHIFPK-ESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
+HI K E + + + G+EYLH + H D+K NI
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNI 152
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 153 G---IIHRDLKPENI 164
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 152 G---IIHRDLKPENI 163
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 154
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 155 G---IIHRDLKPENI 166
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 152
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 153 G---IIHRDLKPENI 164
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 362 QLLGFCSEGSKRAVV-YEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHN 420
+L FC + ++ Y NG L ++I + SF +EYLH
Sbjct: 101 KLY-FCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 421 GCDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 156 KG---IIHRDLKPENI 168
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F+ A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 366
+G+G F V + + TG +A+K++ ++ S ++ EV + ++H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 367 CSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCI 426
++ EY G + ++ + + K ++ ++Y H I
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI----VSAVQYCHQK---RI 132
Query: 427 LHFDIKPHNI 436
+H D+K N+
Sbjct: 133 VHRDLKAENL 142
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 152 G---IIHRDLKPENI 163
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I S ++ + E+ +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEYLHGK 151
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 152 G---IIHRDLKPENI 163
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVYK-GQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 8 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 67
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 68 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 127
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 128 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 167
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 20/140 (14%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHV----------- 358
LGQG FG V K + A+K +++++ ++EV + ++H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 359 --NVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
N V+ + + S + EY N +L I + Q + +L L +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---EALS 130
Query: 417 YLHNGCDVCILHFDIKPHNI 436
Y+H+ I+H D+KP NI
Sbjct: 131 YIHSQ---GIIHRDLKPMNI 147
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 307 FTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFI----NEVSTIGRIHHVNVV 361
F LG+G F +V +L T A+K+L+ E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 362 QLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNG 421
+L + K Y NG L ++I + SF +EYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 422 CDVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 152 G---IIHRDLKPENI 163
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYK-GQLHTGGLIAVKMLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLG 365
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
F + VV E R + R ++ + + T +G++YLHN
Sbjct: 94 FFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 146
Query: 426 ILHFDIKPHNI 436
++H D+K N+
Sbjct: 147 VIHRDLKLGNL 157
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 172
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 307 FTHKLGQGGFGSVYKGQLHTGGLIAVK--MLKNSKFSAEE---FINEVSTIGRIHHVNVV 361
F ++G+G F +VYKG L T + V L++ K + E F E + + H N+V
Sbjct: 30 FDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 362 QLLGFCS---EGSKRAV-VYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEY 417
+ +G K V V E +G+L ++ R + + L +G+++
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQF 144
Query: 418 LHNGCDVCILHFDIKPHNI 436
LH I+H D+K NI
Sbjct: 145 LHTRTPP-IIHRDLKCDNI 162
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYK-GQLHTGGLIAVKMLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLG 365
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
F + VV E R + R ++ + + T +G++YLHN
Sbjct: 110 FFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 426 ILHFDIKPHNI 436
++H D+K N+
Sbjct: 163 VIHRDLKLGNL 173
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 488
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 489 SNFVHRDLAARNV 501
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYK-GQLHTGGLIAVKMLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLG 365
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
F + VV E R + R ++ + + T +G++YLHN
Sbjct: 110 FFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 426 ILHFDIKPHNI 436
++H D+K N+
Sbjct: 163 VIHRDLKLGNL 173
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Query: 311 LGQGGFGSVYK-GQLHTGGLIAVKMLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLG 365
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 366 FCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
F + VV E R + R ++ + + T +G++YLHN
Sbjct: 110 FFEDDDFVYVVLEI----CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 426 ILHFDIKPHNI 436
++H D+K N+
Sbjct: 163 VIHRDLKLGNL 173
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 310 KLGQGGFGSVYKGQLHTGGLIA------VKMLKNSKFSAEEFINEVSTIGRIHHVNVVQL 363
+LG G FG+V KG ++ +K N +E + E + + ++ + +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 364 LGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
+G C E +V E G L++++ E +H+V++ G++YL +
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM----GMKYLE---E 487
Query: 424 VCILHFDIKPHNI 436
+H D+ N+
Sbjct: 488 SNFVHRDLAARNV 500
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Query: 310 KLGQGGFGSVYKGQLH--TGGLIAVKMLKNSKFSAEE--FINEVSTIGRIHHVN-VVQLL 364
++G+G +GSV K +H +G ++AVK ++++ E+ + ++ + R +VQ
Sbjct: 29 EIGRGAYGSVNK-MVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 365 GFCSEGSKRAVVYEYMPNGSLDR-HIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCD 423
G + E M + S D+ + + E L ++ L T + + +L +
Sbjct: 88 GALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--N 144
Query: 424 VCILHFDIKPHNI 436
+ I+H DIKP NI
Sbjct: 145 LKIIHRDIKPSNI 157
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 278 DNVEKFLHNQQSWMPKRYSYP-EIIAMTNHFTH--KLGQGGFGSVY-KGQLHTGGLIAVK 333
++V++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 334 MLKNSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHI 389
+L K E +NE + ++ +V+L + S +V EY+ G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 390 FPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHFDIKPHNI 436
R F A EYLH+ + +++ D+KP N+
Sbjct: 154 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENL 193
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 61/141 (43%), Gaps = 26/141 (18%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 361 VQLLGFCSEGSKRAVVYEYM-PNGSLDRHIFPK----ESRGQSFSWEKLHEVALGTARGI 415
++LL + ++ E M P L I + E +SF W+ L +
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE--------AV 127
Query: 416 EYLHNGCDVCILHFDIKPHNI 436
+ HN C V LH DIK NI
Sbjct: 128 RHCHN-CGV--LHRDIKDENI 145
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 24/134 (17%)
Query: 311 LGQGGFGS-VYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCS 368
LG G G+ VY+G +AVK + FS + EV + H NV++ FC+
Sbjct: 32 LGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFAD--REVQLLRESDEHPNVIRY--FCT 86
Query: 369 EGSKRAVVYEYMP----NGSLDRHIFPKESRGQSFSWEKLHEVAL--GTARGIEYLHNGC 422
E ++ ++Y+ +L ++ K+ F+ L + L T G+ +LH+
Sbjct: 87 EKDRQ---FQYIAIELCAATLQEYVEQKD-----FAHLGLEPITLLQQTTSGLAHLHS-- 136
Query: 423 DVCILHFDIKPHNI 436
+ I+H D+KPHNI
Sbjct: 137 -LNIVHRDLKPHNI 149
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 311 LGQGGFG-SVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+G G FG + + L+AVK ++ + E E+ + H N+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+ A+V EY G L F + FS ++ G+ Y H VC H
Sbjct: 86 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 138
Query: 430 DIKPHN 435
D+K N
Sbjct: 139 DLKLEN 144
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 306 HFTHKLGQGGFGSVYKGQLHTGGLI-AVKMLKN----SKFSAEEFINEVSTIGR-IHHVN 359
HF +G+G FG V + + AVK+L+ K + ++E + + + + H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 360 VVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLH 419
+V L K V +Y+ G L H+ R + F + A A + YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEIASALGYLH 156
Query: 420 NGCDVCILHFDIKPHNI 436
+ + I++ D+KP NI
Sbjct: 157 S---LNIVYRDLKPENI 170
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 311 LGQGGFG-SVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+G G FG + + L+AVK ++ + E E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+ A+V EY G L F + FS ++ G+ Y H VC H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 139
Query: 430 DIKPHN 435
D+K N
Sbjct: 140 DLKLEN 145
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 311 LGQGGFG-SVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+G G FG + + L+AVK ++ + E E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+ A+V EY G L F + FS ++ G+ Y H VC H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 139
Query: 430 DIKPHN 435
D+K N
Sbjct: 140 DLKLEN 145
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 306 HFTHKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKF------SAEEFINEVSTIGRIHHV 358
H +GQG +G V + T + A+K++ +K E EV + ++HH
Sbjct: 29 HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 359 NVVQLLGFCSEGSKRAVVYEYMPNGS-LDR-HIFPKESRGQ 397
N+ +L + +V E G LD+ ++F +S G+
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK 129
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 311 LGQGGFG-SVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+G G FG + + L+AVK ++ + A E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+ A+V EY G L F + FS ++ G+ Y H VC H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVC--HR 139
Query: 430 DIKPHN 435
D+K N
Sbjct: 140 DLKLEN 145
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 10/134 (7%)
Query: 308 THKLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAE---EFINEVSTIGRIHHV-NVVQ 362
+ +LG+G F V + TG A K LK + + E ++E++ + V+
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 363 LLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGC 422
L S+ ++ EY G + P+ + S + + G+ YLH
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 423 DVCILHFDIKPHNI 436
I+H D+KP NI
Sbjct: 152 ---IVHLDLKPQNI 162
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 20/140 (14%)
Query: 311 LGQGGFGSVYKGQ-LHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
LGQG FG V K + A+K +++++ ++EV + ++H VV+ E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 370 G----------SKRAVVY---EYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
K++ ++ EY N +L I + Q + +L L +
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---EALS 130
Query: 417 YLHNGCDVCILHFDIKPHNI 436
Y+H+ I+H ++KP NI
Sbjct: 131 YIHSQ---GIIHRNLKPXNI 147
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
H NV++L+ F E + +V+E M GS+ HI + + F+ + V A ++
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALD 125
Query: 417 YLHNGCDVCILHFDIKPHNI 436
+LHN I H D+KP NI
Sbjct: 126 FLHNK---GIAHRDLKPENI 142
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 357 HVNVVQLLGFCSEGSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIE 416
H NV++L+ F E + +V+E M GS+ HI + + F+ + V A ++
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALD 125
Query: 417 YLHNGCDVCILHFDIKPHNI 436
+LHN I H D+KP NI
Sbjct: 126 FLHNK---GIAHRDLKPENI 142
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 127
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 128 VRHCHN-CGV--LHRDIKDENI 146
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 122
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 123 VRHCHN-CGV--LHRDIKDENI 141
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 126
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 127 VRHCHN-CGV--LHRDIKDENI 145
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 125
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 126 VRHCHN-CGV--LHRDIKDENI 144
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 127
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 128 VRHCHN-CGV--LHRDIKDENI 146
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 154
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 155 VRHCHN-CGV--LHRDIKDENI 173
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 141
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 142 VRHCHN-CGV--LHRDIKDENI 160
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 169
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 170 VRHCHN-CGV--LHRDIKDENI 188
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 141
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 142 VRHCHN-CGV--LHRDIKDENI 160
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 156 VRHCHN-CGV--LHRDIKDENI 174
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 122
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN +LH DIK NI
Sbjct: 123 VRHCHN---XGVLHRDIKDENI 141
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 122
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 123 VRHCHN-CGV--LHRDIKDENI 141
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 154
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 155 VRHCHN-CGV--LHRDIKDENI 173
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 310 KLGQGGFGSVYKG-QLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHH-VNVVQLLGFC 367
KLG+G + V++ + + VK+LK K + E+ + + N++ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVK--KNKIKREIKILENLRGGPNIITLADIV 101
Query: 368 SEGSKR--AVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVC 425
+ R A+V+E++ N + ++ Q+ + + + ++Y H+ +
Sbjct: 102 KDPVSRTPALVFEHVNNTDF-KQLY------QTLTDYDIRFYMYEILKALDYCHS---MG 151
Query: 426 ILHFDIKPHNI 436
I+H D+KPHN+
Sbjct: 152 IMHRDVKPHNV 162
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 156 VRHCHN-CGV--LHRDIKDENI 174
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 169
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 170 VRHCHN-CGV--LHRDIKDENI 188
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 156 VRHCHN-CGV--LHRDIKDENI 174
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 142
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 143 VRHCHN-CGV--LHRDIKDENI 161
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 155
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 156 VRHCHN-CGV--LHRDIKDENI 174
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 154
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 155 VRHCHN-CGV--LHRDIKDENI 173
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 142
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 143 VRHCHN-CGV--LHRDIKDENI 161
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVL--------EA 154
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 155 VRHCHN-CGV--LHRDIKDENI 173
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 127
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 128 VRHCHN-CGV--LHRDIKDENI 146
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 311 LGQGGFG-SVYKGQLHTGGLIAVKMLKNSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 369
+G G FG + L+AVK ++ + E E+ + H N+V+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 370 GSKRAVVYEYMPNGSLDRHIFPKESRGQSFSWEKLHEVALGTARGIEYLHNGCDVCILHF 429
+ A+V EY G L F + FS ++ G+ Y H + + H
Sbjct: 87 PTHLAIVMEYASGGEL----FERICNAGRFSEDEARFFFQQLISGVSYAHA---MQVAHR 139
Query: 430 DIKPHN 435
D+K N
Sbjct: 140 DLKLEN 145
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 311 LGQGGFGSVYKGQLHTGGL-IAVKMLKNSKFSA-EEFIN------EVSTIGRIHH--VNV 360
LG GGFGSVY G + L +A+K ++ + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 361 VQLLGFCSEGSKRAVVYEYMPNGSLDRHIF------PKESRGQSFSWEKLHEVALGTARG 414
++LL + ++ E P D F +E +SF W+ L
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 142
Query: 415 IEYLHNGCDVCILHFDIKPHNI 436
+ + HN C V LH DIK NI
Sbjct: 143 VRHCHN-CGV--LHRDIKDENI 161
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,989,605
Number of Sequences: 62578
Number of extensions: 528067
Number of successful extensions: 2113
Number of sequences better than 100.0: 786
Number of HSP's better than 100.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 536
Number of HSP's that attempted gapping in prelim test: 1576
Number of HSP's gapped (non-prelim): 794
length of query: 436
length of database: 14,973,337
effective HSP length: 102
effective length of query: 334
effective length of database: 8,590,381
effective search space: 2869187254
effective search space used: 2869187254
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)