BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041075
MQAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVG
ISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTD
KAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGFNSSTINW
C

High Scoring Gene Products

Symbol, full name Information P value
PLP4
AT4G37050
protein from Arabidopsis thaliana 2.2e-17
PLP1 protein from Arabidopsis thaliana 1.2e-13
PLA2A
phospholipase A 2A
protein from Arabidopsis thaliana 1.1e-12
AT5G43590 protein from Arabidopsis thaliana 4.1e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041075
        (181 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2115065 - symbol:PLP4 "AT4G37050" species:3702...   165  2.2e-17   2
TAIR|locus:2114995 - symbol:PLP1 species:3702 "Arabidopsi...   155  1.2e-13   2
TAIR|locus:2066286 - symbol:PLA2A "phospholipase A 2A" sp...   175  1.1e-12   1
TAIR|locus:2158337 - symbol:AT5G43590 species:3702 "Arabi...   105  4.1e-05   2


>TAIR|locus:2115065 [details] [associations]
            symbol:PLP4 "AT4G37050" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0006629
            "lipid metabolic process" evidence=IEA] [GO:0008152 "metabolic
            process" evidence=IEA] [GO:0045735 "nutrient reservoir activity"
            evidence=ISS] [GO:0004620 "phospholipase activity" evidence=IDA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
            InterPro:IPR002641 InterPro:IPR016035 Pfam:PF01734 GO:GO:0009737
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0004620 GO:GO:0006629
            EMBL:Z99707 EMBL:AL161590 UniGene:At.4646 SUPFAM:SSF52151
            eggNOG:COG3621 HSSP:Q8LPW4 HOGENOM:HOG000189358 IPI:IPI00546583
            PIR:F85437 RefSeq:NP_195422.3 UniGene:At.48948
            ProteinModelPortal:O23181 PaxDb:O23181 PRIDE:O23181
            EnsemblPlants:AT4G37050.1 GeneID:829859 KEGG:ath:AT4G37050
            TAIR:At4g37050 InParanoid:O23181 OMA:HYQPISE PhylomeDB:O23181
            ProtClustDB:CLSN2914016 Genevestigator:O23181 Uniprot:O23181
        Length = 428

 Score = 165 (63.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
 Identities = 37/90 (41%), Positives = 56/90 (62%)

Query:    55 ASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSG 114
             + W  G+   ++E  G++P++D ++ A  DM+    S   F+++ SE NYLR  D+SL G
Sbjct:   299 SKW--GLMCWVFE-SGSTPILDCYSEAIHDMVDYQSSV-VFQALRSEKNYLRIDDDSLKG 354

Query:   115 DAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
             D  S D + EK M+ L ++GE LLKK VSR
Sbjct:   355 DLGSVDISTEKNMEGLVEVGEALLKKRVSR 384

 Score = 76 (31.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
 Identities = 20/55 (36%), Positives = 28/55 (50%)

Query:     2 QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS 56
             QA +N + +A  SDI   +S APT+ P  R  N   +  EG+   F   D G A+
Sbjct:   193 QAVNNQAMNAKLSDICISTSAAPTFFPAHRFTN---EDSEGIKHEFNLIDGGIAA 244


>TAIR|locus:2114995 [details] [associations]
            symbol:PLP1 species:3702 "Arabidopsis thaliana"
            [GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0045735 "nutrient reservoir activity"
            evidence=ISS] [GO:0004620 "phospholipase activity" evidence=IDA]
            [GO:0010311 "lateral root formation" evidence=IMP]
            InterPro:IPR002641 InterPro:IPR016035 Pfam:PF01734 EMBL:CP002687
            GO:GO:0004620 GO:GO:0006629 GO:GO:0010311 EMBL:Z99707 EMBL:AL161590
            SUPFAM:SSF52151 EMBL:BT029750 IPI:IPI00528835 PIR:H85437
            RefSeq:NP_849511.1 UniGene:At.23952 HSSP:Q8LPW4
            ProteinModelPortal:O23179 SMR:O23179 PRIDE:O23179
            EnsemblPlants:AT4G37070.2 GeneID:829861 KEGG:ath:AT4G37070
            TAIR:At4g37070 HOGENOM:HOG000189358 InParanoid:O23179 OMA:GSAKEEY
            PhylomeDB:O23179 ProtClustDB:CLSN2685599 ArrayExpress:O23179
            Genevestigator:O23179 Uniprot:O23179
        Length = 414

 Score = 155 (59.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 34/94 (36%), Positives = 56/94 (59%)

Query:    49 YADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQ 108
             Y+    A W  GI S +++  G++P++D+   + RDMIH   S   F+++ SE+ YLR  
Sbjct:   269 YSAKKAAKW--GIISWLYD-DGSTPILDITMESSRDMIHYHSSV-VFKALQSEDKYLRID 324

Query:   109 DNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPV 142
             D++L GD  + D A +  ++ L KIGE++L   V
Sbjct:   325 DDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRV 358

 Score = 50 (22.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query:     8 SKDAFPSDISTGSSPAPTYVP 28
             S D   SDI  G+S APT+ P
Sbjct:   175 SLDVKVSDICIGTSAAPTFFP 195


>TAIR|locus:2066286 [details] [associations]
            symbol:PLA2A "phospholipase A 2A" species:3702
            "Arabidopsis thaliana" [GO:0006629 "lipid metabolic process"
            evidence=IEA;IDA] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0045735 "nutrient
            reservoir activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0009626 "plant-type hypersensitive response"
            evidence=IEP;IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0016298
            "lipase activity" evidence=IDA] [GO:0046686 "response to cadmium
            ion" evidence=IEP] [GO:0008219 "cell death" evidence=IGI]
            [GO:0031408 "oxylipin biosynthetic process" evidence=IMP]
            [GO:0051607 "defense response to virus" evidence=IMP] [GO:0071456
            "cellular response to hypoxia" evidence=IEP] [GO:0000165 "MAPK
            cascade" evidence=RCA] [GO:0002237 "response to molecule of
            bacterial origin" evidence=RCA] [GO:0002679 "respiratory burst
            involved in defense response" evidence=RCA] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0006944 "cellular membrane
            fusion" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
            evidence=RCA] [GO:0009646 "response to absence of light"
            evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
            evidence=RCA] [GO:0009723 "response to ethylene stimulus"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009863
            "salicylic acid mediated signaling pathway" evidence=RCA]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
            [GO:0010310 "regulation of hydrogen peroxide metabolic process"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0031348 "negative regulation of defense
            response" evidence=RCA] [GO:0042742 "defense response to bacterium"
            evidence=RCA] [GO:0043069 "negative regulation of programmed cell
            death" evidence=RCA] [GO:0043900 "regulation of multi-organism
            process" evidence=RCA] [GO:0050832 "defense response to fungus"
            evidence=RCA] [GO:0051707 "response to other organism"
            evidence=RCA] InterPro:IPR002641 InterPro:IPR016035 Pfam:PF01734
            GO:GO:0005737 GO:GO:0046686 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0016020 GO:GO:0031408 GO:GO:0071456 GO:GO:0051607
            GO:GO:0016298 GO:GO:0009626 EMBL:AC002505 SUPFAM:SSF52151
            eggNOG:COG3621 HSSP:Q8LPW4 HOGENOM:HOG000189358 EMBL:AY062644
            EMBL:AY093305 IPI:IPI00536283 PIR:T00989 RefSeq:NP_180224.1
            UniGene:At.12388 ProteinModelPortal:O48723 SMR:O48723 IntAct:O48723
            STRING:O48723 PaxDb:O48723 PRIDE:O48723 DNASU:817197
            EnsemblPlants:AT2G26560.1 GeneID:817197 KEGG:ath:AT2G26560
            TAIR:At2g26560 InParanoid:O48723 OMA:KDVCRAT PhylomeDB:O48723
            ProtClustDB:CLSN2913024 ArrayExpress:O48723 Genevestigator:O48723
            Uniprot:O48723
        Length = 407

 Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query:    55 ASWVVGISSTMWEVPGNS-PLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLS 113
             A  V G     W    NS P++D F+ A  DM+   +S   FR++ SE NY+R QD++L+
Sbjct:   271 AKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSA-VFRALHSEANYIRIQDDTLT 329

Query:   114 GDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
             GDA S D A  + +  LAK G+ LLKKPV+R
Sbjct:   330 GDAASVDIATVENLDILAKTGDELLKKPVAR 360


>TAIR|locus:2158337 [details] [associations]
            symbol:AT5G43590 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006629 "lipid metabolic
            process" evidence=IEA] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0045735 "nutrient reservoir activity"
            evidence=ISS] InterPro:IPR002641 InterPro:IPR016035 Pfam:PF01734
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016740 GO:GO:0006629
            GO:GO:0016787 EMBL:AB016875 SUPFAM:SSF52151 eggNOG:COG3621
            HSSP:Q8LPW4 HOGENOM:HOG000189358 IPI:IPI00534522 RefSeq:NP_199172.1
            UniGene:At.55341 ProteinModelPortal:Q9FIY1 SMR:Q9FIY1
            EnsemblPlants:AT5G43590.1 GeneID:834379 KEGG:ath:AT5G43590
            TAIR:At5g43590 InParanoid:Q9FIY1 OMA:REEYYSA PhylomeDB:Q9FIY1
            ProtClustDB:CLSN2916489 Genevestigator:Q9FIY1 Uniprot:Q9FIY1
        Length = 401

 Score = 105 (42.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query:    72 SPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELA 131
             +P++D+   + RDM+    S   F+++ SE+NYLR   ++L  D    D +    ++ L 
Sbjct:   281 TPILDIIFESSRDMVQYHTSV-LFQALESEDNYLRIDADTLKKDEVFMDDSETLNLENLK 339

Query:   132 KIGERLLKKPVSR 144
              IGE+LL   V R
Sbjct:   340 NIGEKLLDTNVMR 352

 Score = 49 (22.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query:     3 AKSNASKDAFPSDISTGSSPAPTYVP 28
             A  + S +A  SDI  G+S AP Y+P
Sbjct:   163 ASVDPSLNAKLSDICIGTSAAPFYLP 188


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      181       181   0.00095  109 3  11 22  0.45    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  157 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.40u 0.10s 19.50t   Elapsed:  00:00:01
  Total cpu time:  19.41u 0.10s 19.51t   Elapsed:  00:00:01
  Start:  Thu May  9 20:28:24 2013   End:  Thu May  9 20:28:25 2013

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