BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041075
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2MY50|PAT01_SOLTU Patatin-01 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357
>sp|Q2MY58|PATA3_SOLTU Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357
>sp|Q2MY60|PAT02_SOLTU Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1
Length = 387
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357
>sp|Q2MY59|PATA2_SOLTU Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357
>sp|Q3YJT4|PT1K2_SOLTU Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1
Length = 375
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ LA++GE LLKKPVS+
Sbjct: 296 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 345
>sp|Q41487|PAT16_SOLTU Patatin-16 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N L+G D A E M+ LA++GE LLKKPVS+
Sbjct: 307 FQDLHSQNNYLRVQENPLTGTTTKADDASEANMELLAQVGENLLKKPVSK 356
>sp|Q3YJT5|PAT05_SOLTU Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1
Length = 387
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSK 357
>sp|Q2MY48|PAT03_SOLTU Patatin-03 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSK 357
>sp|Q2MY38|PAT13_SOLTU Patatin-13 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGETLLKKPVSK 357
>sp|Q2MY44|PAT07_SOLTU Patatin-07 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+ + S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSK 356
>sp|Q42502|PT2K3_SOLTU Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1
Length = 386
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE+LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGEKLLKKPVSK 356
>sp|Q8LPW4|PAT17_SOLCD Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1
Length = 386
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS
Sbjct: 307 FQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSE 356
>sp|Q2MY54|PATJ1_SOLTU Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 357
>sp|P07745|PAT0_SOLTU Patatin OS=Solanum tuberosum PE=3 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q3YJT2|PT2K2_SOLTU Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQAHHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q3YJT0|PT2K4_SOLTU Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1
Length = 374
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 295 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 344
>sp|Q2MY39|PAT12_SOLTU Patatin-12 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 357
>sp|Q2MY45|PAT06_SOLTU Patatin-06 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q2MY41|PAT10_SOLTU Patatin-10 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q2MY36|PAT15_SOLTU Patatin-15 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|P11768|PATM1_SOLTU Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q2MY37|PAT14_SOLTU Patatin-14 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q3YJT3|PT2K1_SOLTU Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1
Length = 374
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 295 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 344
>sp|Q2MY51|PATM3_SOLTU Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q2MY52|PATM2_SOLTU Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|P15476|PATB1_SOLTU Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2
Length = 386
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|P15478|PATT5_SOLTU Patatin-T5 OS=Solanum tuberosum PE=1 SV=1
Length = 386
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F+++ S+NNYLR Q+N+L+G D A E MQ L ++GE LLKK VS+
Sbjct: 307 FQALDSQNNYLRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSK 356
>sp|Q2MY40|PAT11_SOLTU Patatin-11 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK 357
>sp|Q2MY42|PAT04_SOLTU Patatin-04/09 OS=Solanum tuberosum PE=2 SV=1
Length = 386
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|P15477|PATB2_SOLTU Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1
Length = 386
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+NNYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 307 FQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK 356
>sp|Q2MY55|PATD3_SOLTU Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+ NYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQAQNSQKNYLRVQENALTGTTTEMDDASEANMESLVQVGENLLKKPVSK 357
>sp|Q2MY56|PATD2_SOLTU Patatin group D-2 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+ NYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQAQNSQKNYLRVQENALTGTTTEMDDASEANMESLVQVGENLLKKPVSK 357
>sp|Q2MY43|PAT08_SOLTU Patatin-08 OS=Solanum tuberosum PE=2 SV=1
Length = 387
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 95 FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
F++ S+ NYLR Q+N+L+G D A E M+ L ++GE LLKKPVS+
Sbjct: 308 FQAQNSQKNYLRVQENALTGTTTEMDDASEANMESLVQVGENLLKKPVSK 357
>sp|Q3YJS9|PT3K1_SOLTU Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1
Length = 374
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 72 SPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELA 131
SPL ++ ++A M +S F+++ S+NNYLR Q+N+L+G A + D A M L
Sbjct: 273 SPLWEMRSAASSYMNDYYLS-TVFQALDSQNNYLRVQENALTGTATTFDDASVANMILLV 331
Query: 132 KIGERLLKKPVSR 144
++GE LLKK VS
Sbjct: 332 QVGENLLKKSVSE 344
>sp|P25974|GLCB_SOYBN Beta-conglycinin, beta chain OS=Glycine max GN=CG-4 PE=1 SV=1
Length = 439
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 84 DMIHVPMSFDFFRSIASENNYLRF-------QDNSLSGDAPSTDKAIEKEMQELAKIG-- 134
D+ +P ++ F + S N+L F Q N L+G+ + + IE+++QELA G
Sbjct: 338 DVFVIPAAYPFVVNATSNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSA 397
Query: 135 ---ERLLKK 140
ERLLKK
Sbjct: 398 QDVERLLKK 406
>sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 13 OS=Mus musculus GN=Abca13
PE=2 SV=1
Length = 5034
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 68 VPGNSPLVDLFNSAGR--DMIHVPMSFDFFRSIASENNYLRFQD-----NSLSGDAPSTD 120
VP L+ LFN + + DMI ++ D ++AS++N+ F+D +S D P
Sbjct: 1486 VPNVEILLSLFNDSTKQVDMIITNLTEDL--NVASQSNWKHFKDLLLRPTEMSDDIPDQF 1543
Query: 121 KAIEKEMQELAKIGERLLK 139
+ I + + L K ++LLK
Sbjct: 1544 QNIWQHIIALGKEMQKLLK 1562
>sp|Q87JE8|CATA_VIBPA Catalase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD
2210633) GN=VPA0305 PE=3 SV=2
Length = 504
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 110 NSLSGDAPSTDKAIEKEM-----QELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMI 163
N + G PS D+ ++ + +L ++G L + PV+RP+ ++ +GL +N+ +
Sbjct: 333 NLIPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPVNRPLTSVNNHNQNGLSNNAQL 391
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,625,945
Number of Sequences: 539616
Number of extensions: 2690826
Number of successful extensions: 7189
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7148
Number of HSP's gapped (non-prelim): 45
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)