Your job contains 1 sequence.
>041076
MCSSKDKVTTGMNEATPTMVAKINGRPVLQPTCNRVPSKLDRRNTLNKAPPPPPTLPLPT
SIKPNKPAAPLVLTCPAESKSPRPQAIKRGNDLNSSSEKVVTPRSNIRTLERKKSKSFKE
GGNVERTAALMMSTNTSTYSSSLIMDSPGSIAAVRREQMALQHAQRKMRIAHYGRSKSAK
FESKVVPLFDPNNNNAARSTPTTGEQQEEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNM
LFELLVLSGAQVGSDWTSILKKRQGFRDAFSGFEAETVAKLSDKQMMSISTEYSIDMSRV
RGVVDNSNRILEVKRVFGSFEKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRR
GFRFVGPTVVHSFMQAAGLTNDHLIICHRHLPCTLLAAAPYKRPNNDQEPTTPTTATPTL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041076
(420 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087710 - symbol:AT3G12710 species:3702 "Arabi... 921 1.9e-92 1
TAIR|locus:2156329 - symbol:AT5G44680 species:3702 "Arabi... 818 1.5e-91 2
TAIR|locus:1006230719 - symbol:AT1G13635 species:3702 "Ar... 548 6.3e-53 1
TAIR|locus:2174373 - symbol:AT5G57970 species:3702 "Arabi... 531 4.0e-51 1
TAIR|locus:2037268 - symbol:AT1G75090 species:3702 "Arabi... 525 1.7e-50 1
TAIR|locus:2025697 - symbol:AT1G80850 species:3702 "Arabi... 522 3.6e-50 1
TAIR|locus:2200447 - symbol:AT1G15970 species:3702 "Arabi... 510 6.7e-49 1
TIGR_CMR|GSU_0567 - symbol:GSU_0567 "DNA-3-methyladenine ... 443 8.4e-42 1
TIGR_CMR|CBU_0383 - symbol:CBU_0383 "DNA-3-methyladenine ... 419 2.9e-39 1
TIGR_CMR|CPS_2351 - symbol:CPS_2351 "DNA-3-methyladenine ... 385 1.2e-35 1
UNIPROTKB|P05100 - symbol:tag "3-methyl-adenine DNA glyco... 376 1.1e-34 1
UNIPROTKB|Q9KRH0 - symbol:VC1672 "DNA-3-methyladenine gly... 367 9.5e-34 1
TIGR_CMR|VC_1672 - symbol:VC_1672 "DNA-3-methyladenine gl... 367 9.5e-34 1
UNIPROTKB|Q0C3V6 - symbol:tag "DNA-3-methyladenine glycos... 363 2.5e-33 1
TIGR_CMR|SO_0016 - symbol:SO_0016 "DNA-3-methyladenine gl... 342 4.2e-31 1
TIGR_CMR|SPO_1900 - symbol:SPO_1900 "DNA-3-methyladenine ... 292 8.4e-26 1
DICTYBASE|DDB_G0271050 - symbol:magA "methyladenine glyco... 269 2.3e-23 1
>TAIR|locus:2087710 [details] [associations]
symbol:AT3G12710 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA;ISS] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352
EMBL:CP002686 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB024033 HSSP:P05100
IPI:IPI00517252 RefSeq:NP_566433.1 UniGene:At.23022
ProteinModelPortal:Q9LTW3 SMR:Q9LTW3 EnsemblPlants:AT3G12710.1
GeneID:820453 KEGG:ath:AT3G12710 TAIR:At3g12710 InParanoid:Q9LTW3
OMA:SCPRHRV PhylomeDB:Q9LTW3 ProtClustDB:CLSN2914975
Genevestigator:Q9LTW3 Uniprot:Q9LTW3
Length = 312
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 194/324 (59%), Positives = 230/324 (70%)
Query: 79 SKSPRPQAIKRGNDLNSSSEKVVTPRSNIRTLERKKSKSFKEGGNVERTAALMMXXXXXX 138
SK+ KRG SS ++ +++ + + K G++ER +
Sbjct: 2 SKTEAISLTKRGMLPPSSCNSLMDRSESLKRDSVMGNGAAKVRGSLERKKSKSFKEGDSY 61
Query: 139 XXXXLIMDSPGSIAAVRREQMALQHAQRKMRIAHYGRSKSA-KF-ESKVVPLFDPNNNNA 196
LI ++PGSIAAVRREQ+A Q A RK++IAHYGRSKS F SKVVPL +PN N
Sbjct: 62 SSW-LITEAPGSIAAVRREQVAAQQALRKLKIAHYGRSKSTINFTSSKVVPLLNPNPN-- 118
Query: 197 ARSTPTTGEQQEEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDW 256
P +RCSF+T SDPI+VAYHDEEWGVPV +D LFELL LSGAQVGSDW
Sbjct: 119 ----P------HPQRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVGSDW 168
Query: 257 TSILKKRQGFRDAFSGFEAETVAKLSDKQMMSISTEYSIDMSRVRGVVDNSNRILEVKRV 316
TS L+KR +R AF FEAE VAKL++K+M +IS EY I+MS+VRGVV+N+ +I+E+K+
Sbjct: 169 TSTLRKRHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEMSKVRGVVENAKKIVEIKKA 228
Query: 317 FGSFEKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQA 376
F S EKY+WGFVNHKPIST YK GHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQA
Sbjct: 229 FVSLEKYLWGFVNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQA 288
Query: 377 AGLTNDHLIICHRHLPCTLLAAAP 400
AGLTNDHLI C RH PCTLLA P
Sbjct: 289 AGLTNDHLITCCRHAPCTLLATNP 312
>TAIR|locus:2156329 [details] [associations]
symbol:AT5G44680 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:AB016874 HSSP:P05100 EMBL:BT003900 EMBL:BT004932
IPI:IPI00531451 RefSeq:NP_199281.1 UniGene:At.23434
ProteinModelPortal:Q9FIZ5 SMR:Q9FIZ5 EnsemblPlants:AT5G44680.1
GeneID:834497 KEGG:ath:AT5G44680 TAIR:At5g44680 InParanoid:Q9FIZ5
OMA:NTFREAF PhylomeDB:Q9FIZ5 ProtClustDB:CLSN2916729
ArrayExpress:Q9FIZ5 Genevestigator:Q9FIZ5 Uniprot:Q9FIZ5
Length = 353
Score = 818 (293.0 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 159/256 (62%), Positives = 197/256 (76%)
Query: 143 LIMDSPGSIAAVRREQMALQHAQRKMRIAHYGRSKSAKFESKVVPLFDPNNNNAARSTPT 202
++ PGSIAA RRE++A++ +RK +I+HYGR KS K K N N
Sbjct: 113 IVQKQPGSIAAARREEVAMKQEERKKKISHYGRIKSVKSNEK--------NLNV------ 158
Query: 203 TGEQQEEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKK 262
E +++KRCSFIT SDPI+VAYHD+EWGVPV +DN+LFELLVL+GAQVGSDWTS+LK+
Sbjct: 159 --EHEKKKRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKR 216
Query: 263 RQGFRDAFSGFEAETVAKLSDKQMMSISTEYSIDMSRVRGVVDNSNRILEVKRVFGSFEK 322
R FR+AFSGFEAE VA ++K++ SI +Y I++S+V VVDN+ +IL+VKR GSF K
Sbjct: 217 RNTFREAFSGFEAELVADFNEKKIQSIVNDYGINLSQVLAVVDNAKQILKVKRDLGSFNK 276
Query: 323 YIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTND 382
YIWGF+ HKP++T+Y KIPVKTSKSE+ISKDMVRRGFRFVGPTV+HS MQAAGLTND
Sbjct: 277 YIWGFMKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTND 336
Query: 383 HLIICHRHLPCTLLAA 398
HLI C RHL CT +AA
Sbjct: 337 HLITCPRHLECTAMAA 352
Score = 114 (45.2 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 40/109 (36%), Positives = 55/109 (50%)
Query: 1 MCSSKDKVTTGMNEATPTMVAKINGRPVLQPTCNRVPSKLDRRNTLNKAXXXXXXXXXXX 60
MCSSK K T N +++INGRPVLQP N+VP+ LDRRN+L K+
Sbjct: 1 MCSSKLKNLTQEN------ISQINGRPVLQPKSNQVPT-LDRRNSLKKSPPKPLNPIASK 53
Query: 61 SIKPNKPAAPLVLTCPAESKSPRPQAIKRGNDLNSSSEK---VVTPRSN 106
P +P + + +KS R A L SSS K V++P ++
Sbjct: 54 IPSP-RPISLISPPLSPNTKSLRKPAGSCKELLRSSSTKSKPVISPENS 101
>TAIR|locus:1006230719 [details] [associations]
symbol:AT1G13635 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 IPI:IPI00521326 RefSeq:NP_001184988.1
RefSeq:NP_973818.1 UniGene:At.19663 ProteinModelPortal:F4HSJ2
SMR:F4HSJ2 EnsemblPlants:AT1G13635.1 EnsemblPlants:AT1G13635.2
GeneID:2745751 KEGG:ath:AT1G13635 OMA:HNWTEIL Uniprot:F4HSJ2
Length = 311
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 97/197 (49%), Positives = 144/197 (73%)
Query: 208 EEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFR 267
E KRC++IT SD ++V +HD++WGVPV +DN+LFE L +SG + +WT ILK+++ FR
Sbjct: 113 EPKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFR 172
Query: 268 DAFSGFEAETVAKLSDKQMMSISTEYSIDM--SRVRGVVDNSNRILEVKRVFGSFEKYIW 325
+AF F+ VAK+ +K++ I++ +I + SRVR +VDN+ I +V FGSF ++W
Sbjct: 173 EAFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVW 232
Query: 326 GFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLI 385
GF+++KPI ++K+ +P+++ K+E ISKDM++RGFRFVGP +VHSFMQAAGLT DHL+
Sbjct: 233 GFMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLV 292
Query: 386 ICHRHLPCTLLAAAPYK 402
C RH C LA P++
Sbjct: 293 DCFRHGDCVSLAERPWR 309
>TAIR|locus:2174373 [details] [associations]
symbol:AT5G57970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB013396
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT003075 EMBL:AK227342
IPI:IPI00522860 RefSeq:NP_001032091.1 RefSeq:NP_200605.1
UniGene:At.29303 UniGene:At.66976 ProteinModelPortal:Q9FJL9
SMR:Q9FJL9 PaxDb:Q9FJL9 PRIDE:Q9FJL9 EnsemblPlants:AT5G57970.1
EnsemblPlants:AT5G57970.2 GeneID:835908 KEGG:ath:AT5G57970
TAIR:At5g57970 InParanoid:Q9FJL9 OMA:VSMLERE PhylomeDB:Q9FJL9
ProtClustDB:CLSN2716844 Genevestigator:Q9FJL9 Uniprot:Q9FJL9
Length = 347
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 104/223 (46%), Positives = 150/223 (67%)
Query: 175 RSKSAKFESKVVPLFDPNN--NNAARSTPTTGEQQEEKRCSFITAYSDPIFVAYHDEEWG 232
RS S SK P P + + A +P G + + KRC+++T SDP ++ +HDEEWG
Sbjct: 119 RSYSVGSRSKSYPS-KPRSVVSEGALDSPPNGSETK-KRCTWVTPNSDPCYIVFHDEEWG 176
Query: 233 VPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRDAFSGFEAETVAKLSDKQMMSISTE 292
VPV +D LFELLVLSGA W +IL KRQ FR+ F+ F+ + K+++K+++ +
Sbjct: 177 VPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSP 236
Query: 293 YSIDMS--RVRGVVDNSNRILEVKRVFGSFEKYIWGFVNHKPISTQYKFGHKIPVKTSKS 350
S +S ++R V++N+ +IL+V +GSF+KYIW FV +K I +++++ ++P KT K+
Sbjct: 237 ASTLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKA 296
Query: 351 ESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLIICHRHLPC 393
E ISKD+VRRGFR VGPTVV+SFMQAAG+TNDHL C R C
Sbjct: 297 EVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHC 339
>TAIR|locus:2037268 [details] [associations]
symbol:AT1G75090 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 UniGene:At.17945
EMBL:AY034999 EMBL:AY063008 IPI:IPI00546123 RefSeq:NP_565100.1
HSSP:P05100 ProteinModelPortal:Q94CA9 SMR:Q94CA9
EnsemblPlants:AT1G75090.1 GeneID:843846 KEGG:ath:AT1G75090
TAIR:At1g75090 HOGENOM:HOG000220754 InParanoid:Q94CA9 OMA:RETKSHE
PhylomeDB:Q94CA9 ProtClustDB:CLSN2722806 ArrayExpress:Q94CA9
Genevestigator:Q94CA9 Uniprot:Q94CA9
Length = 329
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 94/188 (50%), Positives = 134/188 (71%)
Query: 210 KRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRDA 269
KRC +IT SDPI+V +HDEEWGVPVR+D LFELLV S A W SIL++R FR
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178
Query: 270 FSGFEAETVAKLSDKQMMSISTEYSIDMS--RVRGVVDNSNRILEVKRVFGSFEKYIWGF 327
F F+ +A+ ++K++MS+ + +S ++R +V+N+ +L+VK+ FGSF Y W F
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRF 238
Query: 328 VNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLIIC 387
VNHKP+ Y++G ++PVK+ K+E ISKDM++RGFR VGPTV++SF+QA+G+ NDHL C
Sbjct: 239 VNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTAC 298
Query: 388 HRHLPCTL 395
R+ C +
Sbjct: 299 FRYQECNV 306
>TAIR|locus:2025697 [details] [associations]
symbol:AT1G80850 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC011713
UniGene:At.28188 HSSP:P05100 HOGENOM:HOG000220754
ProtClustDB:CLSN2679529 EMBL:BT033081 IPI:IPI00524875 PIR:B96841
RefSeq:NP_178200.1 UniGene:At.50058 ProteinModelPortal:Q9SAH6
SMR:Q9SAH6 EnsemblPlants:AT1G80850.1 GeneID:844424
KEGG:ath:AT1G80850 TAIR:At1g80850 InParanoid:Q9SAH6 OMA:ENARQIC
PhylomeDB:Q9SAH6 Genevestigator:Q9SAH6 Uniprot:Q9SAH6
Length = 327
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 95/186 (51%), Positives = 133/186 (71%)
Query: 210 KRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRDA 269
KRC++IT SD ++A+HDEEWGVPV +D LFELL LSGA W IL KRQ FR+
Sbjct: 134 KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFREV 193
Query: 270 FSGFEAETVAKLSDKQMMS--ISTEYSIDMSRVRGVVDNSNRILEVKRVFGSFEKYIWGF 327
F F+ +++L++K++ S I+ + ++R +++N+N++ ++ FGSF+KYIW F
Sbjct: 194 FMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIWNF 253
Query: 328 VNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLIIC 387
VN KP +Q+++ ++PVKTSK+E ISKD+VRRGFR V PTV++SFMQ AGLTNDHL C
Sbjct: 254 VNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTCC 313
Query: 388 HRHLPC 393
RH C
Sbjct: 314 FRHHDC 319
>TAIR|locus:2200447 [details] [associations]
symbol:AT1G15970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC010924
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT029471 EMBL:AK229092
IPI:IPI00536280 PIR:C86294 RefSeq:NP_173049.1 UniGene:At.43545
ProteinModelPortal:Q9S9N7 SMR:Q9S9N7 PaxDb:Q9S9N7 PRIDE:Q9S9N7
EnsemblPlants:AT1G15970.1 GeneID:838167 KEGG:ath:AT1G15970
TAIR:At1g15970 InParanoid:Q9S9N7 OMA:EREFRSV PhylomeDB:Q9S9N7
ProtClustDB:CLSN2679529 Genevestigator:Q9S9N7 Uniprot:Q9S9N7
Length = 352
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 96/186 (51%), Positives = 132/186 (70%)
Query: 210 KRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRDA 269
KRC++IT +DP +VA+HDEEWGVPV +D LFELL LSGA WT IL +R R+
Sbjct: 145 KRCAWITPKADPCYVAFHDEEWGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILREV 204
Query: 270 FSGFEAETVAKLSDKQMMSISTEYSIDMS--RVRGVVDNSNRILEVKRVFGSFEKYIWGF 327
F F+ VA+L+DK++ + T +S ++R ++DNS + ++ GS +KY+W F
Sbjct: 205 FMDFDPVAVAELNDKKLTAPGTAAISLLSEVKIRSILDNSRHVRKIIAECGSLKKYMWNF 264
Query: 328 VNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLIIC 387
VN+KP +Q+++ ++PVKTSK+E ISKD+VRRGFR V PTV++SFMQAAGLTNDHLI C
Sbjct: 265 VNNKPTQSQFRYQRQVPVKTSKAEFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDHLIGC 324
Query: 388 HRHLPC 393
R+ C
Sbjct: 325 FRYQDC 330
>TIGR_CMR|GSU_0567 [details] [associations]
symbol:GSU_0567 "DNA-3-methyladenine glycosylase I"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE017180 GenomeReviews:AE017180_GR
RefSeq:NP_951625.1 ProteinModelPortal:Q74FN9 SMR:Q74FN9
GeneID:2685903 KEGG:gsu:GSU0567 PATRIC:22023883 OMA:HELFEYL
ProtClustDB:CLSK746102 BioCyc:GSUL243231:GH27-592-MONOMER
Uniprot:Q74FN9
Length = 191
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 79/183 (43%), Positives = 123/183 (67%)
Query: 210 KRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRDA 269
+RC + +DP++VAYHD EWGVP +D LFE+L+L GAQ G W +IL+KR+ +R A
Sbjct: 3 QRCEWCG--TDPLYVAYHDGEWGVPAHDDRHLFEMLILEGAQAGLSWLTILRKREAYRRA 60
Query: 270 FSGFEAETVAKLSDKQMMSISTEYSIDMSRVR--GVVDNSNRILEVKRVFGSFEKYIWGF 327
F+GF+AETVA S+ + + + I +R++ + N+ +L+++ FGS + Y+W F
Sbjct: 61 FAGFDAETVAAWSEADVARLLADPGIVRNRLKIESTIRNARGVLKIREEFGSLDAYLWRF 120
Query: 328 VNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLIIC 387
V+H P ++ IP +T +S+++SKD+ RRGF FVG T+ ++FMQA G+ NDH++ C
Sbjct: 121 VDHAPRHNAWRSLTDIPARTEQSDAMSKDLKRRGFNFVGSTICYAFMQAVGMVNDHVVHC 180
Query: 388 HRH 390
RH
Sbjct: 181 FRH 183
>TIGR_CMR|CBU_0383 [details] [associations]
symbol:CBU_0383 "DNA-3-methyladenine glycosidase I"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
OMA:KCGENFS GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 TIGRFAMs:TIGR00624 EMBL:AE016828
GenomeReviews:AE016828_GR RefSeq:NP_819422.2 GeneID:1208266
KEGG:cbu:CBU_0383 PATRIC:17929461 ProtClustDB:CLSK914033
BioCyc:CBUR227377:GJ7S-384-MONOMER Uniprot:Q83EE1
Length = 212
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 72/184 (39%), Positives = 124/184 (67%)
Query: 209 EKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRD 268
++RC++++ +DP+++ YHD EWGVP+ +D +LFE L+L G Q G W +ILKKR +RD
Sbjct: 18 KERCAWVS--NDPLYIHYHDLEWGVPIYDDRLLFEFLILEGMQAGLSWLTILKKRNNYRD 75
Query: 269 AFSGFEAETVAKLSDKQMMSISTEYSI--DMSRVRGVVDNSNRILEVKRVFGSFEKYIWG 326
+F+ F+A ++K + +++ + I + +++ ++N+ LEVK+ + +F YIW
Sbjct: 76 SFNNFDASIISKYNPRKIDRLLENAGIIRNKLKIQATINNAKAFLEVKKEWRNFSDYIWH 135
Query: 327 FVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLII 386
FV+ PI Q+K +IP +++ S+ +SKD+ +RGF+FVG T+ ++FMQA G+ NDH
Sbjct: 136 FVDGHPIQNQWKNAKQIPTRSAISDVLSKDLKKRGFKFVGSTICYAFMQAVGMVNDHTTN 195
Query: 387 CHRH 390
C R+
Sbjct: 196 CFRY 199
>TIGR_CMR|CPS_2351 [details] [associations]
symbol:CPS_2351 "DNA-3-methyladenine glycosylase I"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:CP000083 GenomeReviews:CP000083_GR RefSeq:YP_269071.1
ProteinModelPortal:Q482E7 STRING:Q482E7 GeneID:3521376
KEGG:cps:CPS_2351 PATRIC:21467793 OMA:PNELVIC
ProtClustDB:CLSK742465 BioCyc:CPSY167879:GI48-2416-MONOMER
Uniprot:Q482E7
Length = 194
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 80/183 (43%), Positives = 115/183 (62%)
Query: 211 RCSFI-TAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRDA 269
RC ++ T+ D +V YHDEEWGVPV D +FE LVL AQ G W +ILKKR+G+R
Sbjct: 8 RCPWLDTSKLD--YVKYHDEEWGVPVYEDKKMFESLVLESAQAGLSWYTILKKREGYRKL 65
Query: 270 FSGFEAETVAKLSDKQMMSISTEYSIDMSR--VRGVVDNSNRILEVKRVFGSFEKYIWGF 327
F+ FE VAK +D + + + SI R + ++N+NR +E++ FGSF K+IW +
Sbjct: 66 FADFEVTKVAKFTDDDVERLMQDASIVRYRRKIEAAINNANRFIEIQNEFGSFTKFIWSY 125
Query: 328 VNHKPISTQYKFGHKIPVKTSK-SESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLII 386
VN++ I K V TS S++++KD+ +RGF+F+GPT ++S +QA GL NDH
Sbjct: 126 VNNETIVNNLDT-IKDYVATSPISDALAKDLKKRGFKFLGPTTLYSHLQATGLINDHSNS 184
Query: 387 CHR 389
C R
Sbjct: 185 CFR 187
>UNIPROTKB|P05100 [details] [associations]
symbol:tag "3-methyl-adenine DNA glycosylase I,
constitutive" species:83333 "Escherichia coli K-12" [GO:0006284
"base-excision repair" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008725 "DNA-3-methyladenine glycosylase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR004597 InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 ECOGENE:EG10986 EMBL:J02606 EMBL:X03845 EMBL:U00039
EMBL:U00096 EMBL:AP009048 PIR:A24604 RefSeq:NP_418005.1
RefSeq:YP_491887.1 PDB:1LMZ PDB:1NKU PDB:1P7M PDBsum:1LMZ
PDBsum:1NKU PDBsum:1P7M ProteinModelPortal:P05100 SMR:P05100
DIP:DIP-10950N IntAct:P05100 MINT:MINT-1230071
EnsemblBacteria:EBESCT00000001171 EnsemblBacteria:EBESCT00000015713
GeneID:12932561 GeneID:947137 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR KEGG:ecj:Y75_p3628 KEGG:eco:b3549
PATRIC:32122570 EchoBASE:EB0979 eggNOG:COG2818 HOGENOM:HOG000220753
KO:K01246 OMA:KCGENFS ProtClustDB:PRK10353
BioCyc:EcoCyc:EG10986-MONOMER BioCyc:ECOL316407:JW3518-MONOMER
BioCyc:MetaCyc:EG10986-MONOMER EvolutionaryTrace:P05100
Genevestigator:P05100 GO:GO:0008725 GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 TIGRFAMs:TIGR00624
Uniprot:P05100
Length = 187
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 68/180 (37%), Positives = 112/180 (62%)
Query: 210 KRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRDA 269
+RC +++ DP+++AYHD EWGVP + LFE++ L G Q G W ++LKKR+ +R
Sbjct: 2 ERCGWVS--QDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRAC 59
Query: 270 FSGFEAETVAKLSDKQMMSISTEYSIDMSR--VRGVVDNSNRILEVKRVFGSFEKYIWGF 327
F F+ VA + ++ + + + I R ++ ++ N+ L++++ F ++W F
Sbjct: 60 FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWSF 119
Query: 328 VNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLIIC 387
VNH+P TQ +IP TS S+++SK + +RGF+FVG T+ +SFMQA GL NDH++ C
Sbjct: 120 VNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 179
>UNIPROTKB|Q9KRH0 [details] [associations]
symbol:VC1672 "DNA-3-methyladenine glycosidase I"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GenomeReviews:AE003852_GR GO:GO:0006281 HSSP:P05100 OMA:FKMLILE
EMBL:AE004245 PIR:E82171 RefSeq:NP_231308.1
ProteinModelPortal:Q9KRH0 DNASU:2613803 GeneID:2613803
KEGG:vch:VC1672 PATRIC:20082406 ProtClustDB:CLSK874490
Uniprot:Q9KRH0
Length = 193
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 70/185 (37%), Positives = 111/185 (60%)
Query: 208 EEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFR 267
E+ C++ A + P+ YHD+EWG V +D LFE L L GAQ G W ++LKKR+G+R
Sbjct: 5 EQGVCAW--AMNHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYR 62
Query: 268 DAFSGFEAETVAKLSDKQMMSISTEYSIDMSR--VRGVVDNSNRILEVKRVFGSFEKYIW 325
AF G++ + +A+ + + I EY + R + V N+ L +++ FGS + +W
Sbjct: 63 QAFLGYDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALW 122
Query: 326 GFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLI 385
FV +P ++ +P T +S+++SK + +RGF+FVG T+ ++FMQA GL NDHL+
Sbjct: 123 QFVGGQPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLV 182
Query: 386 ICHRH 390
C H
Sbjct: 183 GCPNH 187
>TIGR_CMR|VC_1672 [details] [associations]
symbol:VC_1672 "DNA-3-methyladenine glycosidase I"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 GenomeReviews:AE003852_GR
GO:GO:0006281 HSSP:P05100 OMA:FKMLILE EMBL:AE004245 PIR:E82171
RefSeq:NP_231308.1 ProteinModelPortal:Q9KRH0 DNASU:2613803
GeneID:2613803 KEGG:vch:VC1672 PATRIC:20082406
ProtClustDB:CLSK874490 Uniprot:Q9KRH0
Length = 193
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 70/185 (37%), Positives = 111/185 (60%)
Query: 208 EEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFR 267
E+ C++ A + P+ YHD+EWG V +D LFE L L GAQ G W ++LKKR+G+R
Sbjct: 5 EQGVCAW--AMNHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYR 62
Query: 268 DAFSGFEAETVAKLSDKQMMSISTEYSIDMSR--VRGVVDNSNRILEVKRVFGSFEKYIW 325
AF G++ + +A+ + + I EY + R + V N+ L +++ FGS + +W
Sbjct: 63 QAFLGYDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALW 122
Query: 326 GFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLI 385
FV +P ++ +P T +S+++SK + +RGF+FVG T+ ++FMQA GL NDHL+
Sbjct: 123 QFVGGQPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLV 182
Query: 386 ICHRH 390
C H
Sbjct: 183 GCPNH 187
>UNIPROTKB|Q0C3V6 [details] [associations]
symbol:tag "DNA-3-methyladenine glycosylase I"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GO:GO:0006281 EMBL:CP000158 GenomeReviews:CP000158_GR
RefSeq:YP_759587.1 ProteinModelPortal:Q0C3V6 SMR:Q0C3V6
STRING:Q0C3V6 GeneID:4288756 KEGG:hne:HNE_0860 PATRIC:32214528
OMA:LVECISY ProtClustDB:CLSK2531831
BioCyc:HNEP228405:GI69-902-MONOMER Uniprot:Q0C3V6
Length = 193
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 70/185 (37%), Positives = 107/185 (57%)
Query: 208 EEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFR 267
E C + +DPI+ AYHDEEWGVP R+ L+E L L G Q G W +IL+KR+ R
Sbjct: 3 EPHSCGWAPV-TDPIYRAYHDEEWGVPERDPRALWEKLQLDGMQAGLSWITILRKRESIR 61
Query: 268 DAFSGFEAETVAKLSDKQMMSISTEYSIDMS--RVRGVVDNSNRILEVKRVFGSFEKYIW 325
+ F F+ E +A+ + ++ T I S ++ V+ N+ L + F Y W
Sbjct: 62 EEFDEFDPEKLARWTPRRAEKALTNPGIIRSPKKIDAVIGNARSYLSMMEAGDDFSDYCW 121
Query: 326 GFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLI 385
G+V KP+ ++K + P T S ++S+D+ +RGF+FVGPT+V+++ QA G+ NDH +
Sbjct: 122 GYVGGKPVVNKWKNFREAPTSTDWSAAMSRDLKKRGFKFVGPTIVYAWAQAVGMVNDHEV 181
Query: 386 ICHRH 390
C RH
Sbjct: 182 GCPRH 186
>TIGR_CMR|SO_0016 [details] [associations]
symbol:SO_0016 "DNA-3-methyladenine glycosidase I"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P05100 RefSeq:NP_715658.1 ProteinModelPortal:Q8EKS4 SMR:Q8EKS4
GeneID:1167914 KEGG:son:SO_0016 PATRIC:23519723 OMA:FKMLILE
ProtClustDB:CLSK905542 Uniprot:Q8EKS4
Length = 191
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 68/188 (36%), Positives = 105/188 (55%)
Query: 208 EEKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFR 267
EE RC++++ DP++ YHD WG PV + LF L L G Q G W +ILKK+Q +
Sbjct: 2 EEIRCNWVS--DDPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYE 59
Query: 268 DAFSGFEAETVAKLSDKQMMSISTEYSIDMSRVR--GVVDNSNRILEVKRVFGSFEKYIW 325
AF+ FE +A D ++ + I +R++ ++ N+ L F ++W
Sbjct: 60 QAFADFEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLW 119
Query: 326 GFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLI 385
FV KP Q+ +IP +T +SE++SK + + GF FVGPT+ ++FMQA G+ NDHL+
Sbjct: 120 SFVGGKPRVNQFTSMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLV 179
Query: 386 ICHRHLPC 393
C + C
Sbjct: 180 DCVAYDAC 187
>TIGR_CMR|SPO_1900 [details] [associations]
symbol:SPO_1900 "DNA-3-methyladenine glycosylase I"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 EMBL:CP000031 GenomeReviews:CP000031_GR
HOGENOM:HOG000220753 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 RefSeq:YP_167136.1
ProteinModelPortal:Q5LS69 GeneID:3195713 KEGG:sil:SPO1900
PATRIC:23377131 OMA:WRTILAK ProtClustDB:CLSK713517 Uniprot:Q5LS69
Length = 202
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 68/182 (37%), Positives = 96/182 (52%)
Query: 209 EKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRD 268
+ RC + S P F YHD EWG PV +D LFE L L Q G W +IL KR+ FR
Sbjct: 11 QPRCRWCN--SAPEFFDYHDREWGYPVGDDRRLFEKLCLESFQSGLSWRTILAKRENFRA 68
Query: 269 AFSGFEAETVAKLSDKQMMSISTEYSIDMSR--VRGVVDNSNRILEVKRVFGSFEKYIWG 326
AF GF+ +A + + + I R + V++N+ R+ ++ GS Y+W
Sbjct: 69 AFDGFDWTRIAAYDAADVARLLDDAGIIRHRGKIEAVINNARRMGDLLAEHGSLAAYVWS 128
Query: 327 FVNHKPIST-QYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLI 385
+ KP + + IP T+ +SKD+ +RG++FVGPT V +FMQA GL NDH
Sbjct: 129 Y-EPKPEDLPEPQTASIIPASTA----MSKDLKKRGWKFVGPTTVFAFMQAMGLVNDHAR 183
Query: 386 IC 387
C
Sbjct: 184 GC 185
>DICTYBASE|DDB_G0271050 [details] [associations]
symbol:magA "methyladenine glycosylase" species:44689
"Dictyostelium discoideum" [GO:0008725 "DNA-3-methyladenine
glycosylase activity" evidence=IEA;ISS] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 dictyBase:DDB_G0271050
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG2818
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0006281 RefSeq:XP_001134476.1
ProteinModelPortal:Q1ZXP8 SMR:Q1ZXP8 STRING:Q1ZXP8
EnsemblProtists:DDB0232992 GeneID:8617613 KEGG:ddi:DDB_G0271050
InParanoid:Q1ZXP8 ProtClustDB:CLSZ2733540 Uniprot:Q1ZXP8
Length = 290
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 60/190 (31%), Positives = 102/190 (53%)
Query: 209 EKRCSFITAYSDPIFVAYHDEEWGVPVRNDNMLFELLVLSGAQVGSDWTSILKKRQGFRD 268
+KRC +I+ D ++ YHD EWG R+ LFE + L Q G W ++LKKRQ +RD
Sbjct: 90 KKRCFWISLTKDEEYIHYHDNEWGKENRDSQRLFEKICLEAQQAGLSWITVLKKRQNYRD 149
Query: 269 AFSGFEAETVAKLSDKQMMSISTEYSIDMSRVR----GVVDNSNRILEVKRVFG-SFEKY 323
+F F+ + + +++ S + + R R +VDN+ L+++ F +
Sbjct: 150 SFYNFDPKLIVDNITPEVIENSLMKNTGLIRNRLKLQAIVDNARAYLKMRDQDKIEFSTF 209
Query: 324 IWGFVNHKPISTQYKFGHKI-----PVKTSK-SESISKDMVRRGFRFVGPTVVHSFMQAA 377
IW FVN+K Q G P+ ++ S+++S + ++GF+F+G T +++FMQ+
Sbjct: 210 IWSFVNNKSSIGQRVTGDTSVQGSRPLTRNEVSDAMSVALKKKGFKFIGTTTLYAFMQSV 269
Query: 378 GLTNDHLIIC 387
G+ NDH C
Sbjct: 270 GIINDHCKDC 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 420 389 0.00093 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 617 (66 KB)
Total size of DFA: 238 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.93u 0.08s 33.01t Elapsed: 00:00:04
Total cpu time: 32.94u 0.08s 33.02t Elapsed: 00:00:04
Start: Thu May 9 20:31:12 2013 End: Thu May 9 20:31:16 2013