Query 041077
Match_columns 257
No_of_seqs 116 out of 1156
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:26:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041077.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041077hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.1E-64 7.3E-69 450.4 22.3 251 2-253 68-353 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 1.6E-64 5.6E-69 444.8 15.0 251 2-257 22-306 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 5.6E-63 1.9E-67 434.4 22.0 243 1-245 23-309 (312)
4 1odm_A Isopenicillin N synthas 100.0 7.7E-58 2.6E-62 404.6 18.7 232 2-246 30-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.7E-58 5.9E-63 405.4 13.7 231 2-246 20-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.1E-54 3.6E-59 376.0 17.8 218 2-244 16-276 (280)
7 3dkq_A PKHD-type hydroxylase S 96.1 0.035 1.2E-06 46.1 9.7 109 93-212 71-195 (243)
8 2hbt_A EGL nine homolog 1; pro 94.6 0.11 3.7E-06 43.2 7.8 83 122-212 117-213 (247)
9 3i3q_A Alpha-ketoglutarate-dep 93.7 0.79 2.7E-05 37.0 10.9 109 83-210 76-201 (211)
10 2rg4_A Uncharacterized protein 92.8 0.43 1.5E-05 38.7 8.2 43 168-214 166-209 (216)
11 2jig_A Prolyl-4 hydroxylase; h 91.6 0.55 1.9E-05 38.0 7.4 106 93-213 78-218 (224)
12 3itq_A Prolyl 4-hydroxylase, a 91.1 0.81 2.8E-05 37.1 7.8 106 91-212 89-212 (216)
13 3s57_A Alpha-ketoglutarate-dep 89.4 1 3.6E-05 36.0 7.1 80 123-209 101-200 (204)
14 2iuw_A Alkylated repair protei 84.6 2.5 8.4E-05 34.7 6.8 82 122-210 126-228 (238)
15 3tht_A Alkylated DNA repair pr 84.4 3.6 0.00012 35.7 8.1 68 122-197 198-272 (345)
16 3kt7_A PKHD-type hydroxylase T 55.5 17 0.00057 34.0 5.5 100 97-212 106-228 (633)
17 2fct_A Syringomycin biosynthes 48.2 1.1E+02 0.0039 25.1 18.4 34 2-36 12-45 (313)
18 1e5r_A Proline oxidase; oxidor 44.0 39 0.0013 28.4 5.6 65 140-210 103-175 (290)
19 3rcq_A Aspartyl/asparaginyl be 36.8 73 0.0025 25.0 5.9 69 140-214 114-186 (197)
20 2opw_A Phyhd1 protein; double- 27.2 1.1E+02 0.0039 24.8 5.9 37 2-39 6-42 (291)
21 2ww6_A Fibritin, T4 fibritin; 26.2 59 0.002 16.7 2.4 13 162-174 12-24 (27)
22 1zrr_A E-2/E-2' protein; nicke 25.6 2.3E+02 0.0077 21.7 7.1 64 141-212 95-159 (179)
23 2p17_A Pirin-like protein; GK1 20.6 2.1E+02 0.0073 23.5 6.3 76 137-220 50-127 (277)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.1e-64 Score=450.39 Aligned_cols=251 Identities=34% Similarity=0.647 Sum_probs=226.9
Q ss_pred hHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccC--CCCCcccCCC----CCCCChhhhhhhcc
Q 041077 2 EKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKFFALPLEEKQKYAKQN--GSDGGYGNDI----HPTLNWSDRLFLAL 75 (257)
Q Consensus 2 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~--~~~~Gy~~~~----~~~~d~~e~~~~~~ 75 (257)
++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ..++||+... .+..||+|.|.++.
T Consensus 68 ~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~ 147 (356)
T 1gp6_A 68 EELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLA 147 (356)
T ss_dssp HHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEE
T ss_pred HHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeec
Confidence 68999999999999999999999999999999999999999999997763 4689998764 45789999999887
Q ss_pred CCccccccCCCCCCchhhHHH--------------HHHHHHHHcCCChhhhHhhhcc--CCcceeeeeecCCCCCCCCcc
Q 041077 76 IPEDRRQLKFWPENPESFSQI--------------IFKAFARSINLEENCFQDMFGE--QTFMFGRFFWYPPCLRPNLVL 139 (257)
Q Consensus 76 ~p~~~~~~~~wP~~~~~f~~~--------------ll~~la~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~~~~~ 139 (257)
.|......|.||+.+|+|+++ ||++||++||+++++|.+.+.. .+.+.||++|||||+.++..+
T Consensus 148 ~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~ 227 (356)
T 1gp6_A 148 YPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELAL 227 (356)
T ss_dssp ESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCC
T ss_pred CCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCccccc
Confidence 665445678999989999887 9999999999999999988842 467899999999999888889
Q ss_pred cccccCCCCcEEEEecCCCCCceEEeeCCeEEEecCCCCcEE--------EeeCCeecCCCceeccCCCCCeeEEEEeec
Q 041077 140 GVFPHTDGSGLTVLLPDKEVEGLQFLKDDQWYRVPVIPEAFV--------IMSNGIFKSPVHRVVTNSERERMSVAVFCC 211 (257)
Q Consensus 140 g~~~HtD~~~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~lv--------~~Tng~~~s~~HRV~~~~~~~R~S~~~F~~ 211 (257)
|+++|||+|+||||+| |+++||||+++|+|++|+|.||++| +||||+|+|+.|||+.++..+|+|++||++
T Consensus 228 g~~~HtD~g~lTlL~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~ 306 (356)
T 1gp6_A 228 GVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCE 306 (356)
T ss_dssp SEEEECCCSSEEEEEE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEE
T ss_pred CcCCccCCCeEEEEEE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeec
Confidence 9999999999999999 7899999999999999999999999 999999999999999988889999999999
Q ss_pred CCCCc-eeec--cccCCCCCCCCCChH--HHHHHHHHhhhcccchhh
Q 041077 212 PNPEK-DIEP--GVVNEARPRLYKTLN--NYNRLYFENLRRVKKGIE 253 (257)
Q Consensus 212 p~~d~-~i~p--~~~~~~~~~~y~~~~--e~~~~~~~~~~~~~~~~~ 253 (257)
|+.|+ +|+| +++++++|++|++++ ||+..+++++..++...+
T Consensus 307 P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~~~ 353 (356)
T 1gp6_A 307 PPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSE 353 (356)
T ss_dssp CCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC---
T ss_pred CCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchhhh
Confidence 99999 9999 899999999999999 999999988777755433
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.6e-64 Score=444.78 Aligned_cols=251 Identities=29% Similarity=0.544 Sum_probs=219.7
Q ss_pred hHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCCcccCCC--CCCCChhhhhhhccCCcc
Q 041077 2 EKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKFFALPLEEKQKYAKQNGSDGGYGNDI--HPTLNWSDRLFLALIPED 79 (257)
Q Consensus 2 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~--~~~~d~~e~~~~~~~p~~ 79 (257)
++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.... .+..||+|.|.+...|.
T Consensus 22 ~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~~e~~~~d~ke~~~~~~~p~- 97 (319)
T 1w9y_A 22 EMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQAEVTDMDWESTFFLKHLPI- 97 (319)
T ss_dssp HHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCCCCGGGCCCCEEEEEEEESC-
T ss_pred HHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCcccccCCCCChhhheeeecCCc-
Confidence 6899999999999999999999999999999999999999999998654 23666543 45689999999877654
Q ss_pred ccccCCCCCCchhhHHH--------------HHHHHHHHcCCChhhhHhhhcc--CCcceeeeeecCCCCCCCCcccccc
Q 041077 80 RRQLKFWPENPESFSQI--------------IFKAFARSINLEENCFQDMFGE--QTFMFGRFFWYPPCLRPNLVLGVFP 143 (257)
Q Consensus 80 ~~~~~~wP~~~~~f~~~--------------ll~~la~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~~~~~g~~~ 143 (257)
...|.||+.+|+|+++ ||++||++||+++++|.+.+.. .+.+.||++|||||+.++..+|+++
T Consensus 98 -~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~ 176 (319)
T 1w9y_A 98 -SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRA 176 (319)
T ss_dssp -CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSCGGGGSSCCC
T ss_pred -ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCccccccccccc
Confidence 2468899989999887 9999999999999999988853 3668999999999998878899999
Q ss_pred cCCCCcEEEEecCCCCCceEEeeCCeEEEecCCCCcEE--------EeeCCeecCCCceeccCCCCCeeEEEEeecCCCC
Q 041077 144 HTDGSGLTVLLPDKEVEGLQFLKDDQWYRVPVIPEAFV--------IMSNGIFKSPVHRVVTNSERERMSVAVFCCPNPE 215 (257)
Q Consensus 144 HtD~~~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~lv--------~~Tng~~~s~~HRV~~~~~~~R~S~~~F~~p~~d 215 (257)
|||+|+||||+|+++++||||.++|+|++|+|.||++| +||||+|+|+.|||++++..+|+|++||++|+.|
T Consensus 177 HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d 256 (319)
T 1w9y_A 177 HTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSD 256 (319)
T ss_dssp BCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTT
T ss_pred ccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCC
Confidence 99999999999944799999999999999999999999 9999999999999999988899999999999999
Q ss_pred ceeec--cccCCC---CCCCCCChH--HHHHHHHHhhhcccch-hhhhcC
Q 041077 216 KDIEP--GVVNEA---RPRLYKTLN--NYNRLYFENLRRVKKG-IEAAML 257 (257)
Q Consensus 216 ~~i~p--~~~~~~---~~~~y~~~~--e~~~~~~~~~~~~~~~-~~~~~~ 257 (257)
++|+| ++++++ +|++|++++ ||+..+++..+.++.. ++.+||
T Consensus 257 ~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~ 306 (319)
T 1w9y_A 257 AVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA 306 (319)
T ss_dssp CEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred CeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHH
Confidence 99999 888887 599999999 9999999888877765 576653
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=5.6e-63 Score=434.39 Aligned_cols=243 Identities=24% Similarity=0.400 Sum_probs=213.4
Q ss_pred ChHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCCcccCCC------CCCCChhhhhhhc
Q 041077 1 LEKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKFFALPLEEKQKYAKQNGSDGGYGNDI------HPTLNWSDRLFLA 74 (257)
Q Consensus 1 ~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~------~~~~d~~e~~~~~ 74 (257)
+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||.+.+ ....||+|.|.++
T Consensus 23 ~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~ 102 (312)
T 3oox_A 23 AQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGVETAKGADHYDLKEFWHMG 102 (312)
T ss_dssp HHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCCCCCSTTSCSCCCCEEEEEC
T ss_pred HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccccceecCCCCCCCceeeeEee
Confidence 3689999999999999999999999999999999999999999999877545678997543 2468999999886
Q ss_pred cC-Ccc-----ccccCCCCCCchhhHHH--------------HHHHHHHHcCCChhhhHhhhccCCcceeeeeecCCCCC
Q 041077 75 LI-PED-----RRQLKFWPENPESFSQI--------------IFKAFARSINLEENCFQDMFGEQTFMFGRFFWYPPCLR 134 (257)
Q Consensus 75 ~~-p~~-----~~~~~~wP~~~~~f~~~--------------ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~ 134 (257)
.. +.. ...+|.||+.+|+|+++ ||++||++||+++++|.+.+. .+.+.||++|||||+.
T Consensus 103 ~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~-~~~~~lr~~~Ypp~~~ 181 (312)
T 3oox_A 103 RDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQ-DGNSVLRLLHYPPIPK 181 (312)
T ss_dssp CCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHT-TCCCEEEEEEECCCSS
T ss_pred cCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhc-CCcceeeeEecCCCCC
Confidence 43 211 12368999989999876 999999999999999999884 5678999999999987
Q ss_pred CCCcccccccCCCCcEEEEecCCCCCceEEe-eCCeEEEecCCCCcEE--------EeeCCeecCCCceeccCC----CC
Q 041077 135 PNLVLGVFPHTDGSGLTVLLPDKEVEGLQFL-KDDQWYRVPVIPEAFV--------IMSNGIFKSPVHRVVTNS----ER 201 (257)
Q Consensus 135 ~~~~~g~~~HtD~~~lTlL~q~~~~~GLqV~-~~g~W~~V~p~~g~lv--------~~Tng~~~s~~HRV~~~~----~~ 201 (257)
++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|.||++| +||||+|+|+.|||+.++ ..
T Consensus 182 ~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~ 260 (312)
T 3oox_A 182 DATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGV 260 (312)
T ss_dssp CCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTS
T ss_pred CcCCcCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCC
Confidence 655599999999999999999 789999997 7899999999999999 999999999999998764 45
Q ss_pred CeeEEEEeecCCCCceeec--cccCCCCCCCCC-ChH--HHHHHHHHhh
Q 041077 202 ERMSVAVFCCPNPEKDIEP--GVVNEARPRLYK-TLN--NYNRLYFENL 245 (257)
Q Consensus 202 ~R~S~~~F~~p~~d~~i~p--~~~~~~~~~~y~-~~~--e~~~~~~~~~ 245 (257)
+|||++||++|+.|++|+| +++++++|++|+ +++ ||+..+++..
T Consensus 261 ~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 261 PRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp CEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred CEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 7999999999999999999 899999999999 999 9999998853
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=7.7e-58 Score=404.64 Aligned_cols=232 Identities=24% Similarity=0.343 Sum_probs=204.7
Q ss_pred hHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHH-hcCCHHHHhhhhccCCCCCcccCCC-----C-------CCCChh
Q 041077 2 EKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKF-FALPLEEKQKYAKQNGSDGGYGNDI-----H-------PTLNWS 68 (257)
Q Consensus 2 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~Gy~~~~-----~-------~~~d~~ 68 (257)
++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||...+ . ...||+
T Consensus 30 ~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy~~~~~e~~~~~~~~~~~~~~d~k 101 (331)
T 1odm_A 30 QQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAYNKEHQDQVRAGYYLSIPGKKAVE 101 (331)
T ss_dssp HHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTTCTTCTTCSSSEEECCBTTTBCCE
T ss_pred HHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCCCcCCccccccccccccCCCCChh
Confidence 68999999999999999999 899999999999 9999999999865 5665432 1 467999
Q ss_pred hhhhhccCCc-c---------ccccCCCCCC--chhhHHH--------------HHHHHHHHcCCChhhhHhhhccCCcc
Q 041077 69 DRLFLALIPE-D---------RRQLKFWPEN--PESFSQI--------------IFKAFARSINLEENCFQDMFGEQTFM 122 (257)
Q Consensus 69 e~~~~~~~p~-~---------~~~~~~wP~~--~~~f~~~--------------ll~~la~~Lgl~~~~~~~~~~~~~~~ 122 (257)
|.|.++..+. + ...+|.||+. +|+|+++ ||++||++||+++++|.+.+. .+.+
T Consensus 102 E~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~-~~~~ 180 (331)
T 1odm_A 102 SFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFK-PDDT 180 (331)
T ss_dssp EEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCC-TTTC
T ss_pred heEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc-CcHH
Confidence 9999875421 1 1347899987 8999887 999999999999999998884 5778
Q ss_pred eee--eeecC------C---CCCCCC-cccccccCCCCcEEEEecCCCCCceEEe-eCCeEEEecCCCCcEE--------
Q 041077 123 FGR--FFWYP------P---CLRPNL-VLGVFPHTDGSGLTVLLPDKEVEGLQFL-KDDQWYRVPVIPEAFV-------- 181 (257)
Q Consensus 123 ~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~~~lTlL~q~~~~~GLqV~-~~g~W~~V~p~~g~lv-------- 181 (257)
.|| ++||| | |+.++. .+|+++|||+|+||||+| |+++||||+ ++| |++|+|.||++|
T Consensus 181 ~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~ 258 (331)
T 1odm_A 181 LASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SNVQNLQVETAAG-YQDIEADDTGYLINCGSYMA 258 (331)
T ss_dssp CCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CSSCCEEEEETTE-EEECCCCTTSEEEEECHHHH
T ss_pred HHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee-CCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHH
Confidence 999 99999 7 766665 789999999999999999 789999999 688 999999999999
Q ss_pred EeeCCeecCCCceeccCCCCCeeEEEEeecCCCCceeec--cccCCCCCCCCCChH--HHHHHHHHhhh
Q 041077 182 IMSNGIFKSPVHRVVTNSERERMSVAVFCCPNPEKDIEP--GVVNEARPRLYKTLN--NYNRLYFENLR 246 (257)
Q Consensus 182 ~~Tng~~~s~~HRV~~~~~~~R~S~~~F~~p~~d~~i~p--~~~~~~~~~~y~~~~--e~~~~~~~~~~ 246 (257)
+||||+|+|+.|||+.+ ..+|+|++||++|+.|++|+| +++++++ ++|++++ ||+..++++.+
T Consensus 259 ~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 259 HLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp HHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHHH
T ss_pred HHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHHHH
Confidence 99999999999999864 678999999999999999999 8888777 8999999 99999988764
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.7e-58 Score=405.41 Aligned_cols=231 Identities=19% Similarity=0.255 Sum_probs=196.3
Q ss_pred hHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHHhcCC-HHHHhhhhcc-CCCCCcccCCC----------CCCCChhh
Q 041077 2 EKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKFFALP-LEEKQKYAKQ-NGSDGGYGNDI----------HPTLNWSD 69 (257)
Q Consensus 2 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~-~~~~~Gy~~~~----------~~~~d~~e 69 (257)
++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++... ....+||.+.+ .+..||+|
T Consensus 20 ~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~~~e~~~~~~~~~~~~d~~E 99 (311)
T 1dcs_A 20 DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSM 99 (311)
T ss_dssp HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC-----------------CE
T ss_pred HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeeccccccccccCCCCCCCcce
Confidence 379999999999999999999999999999999999999 9999999876 35689998653 24679999
Q ss_pred hhhhccCCccccccCCCCCCchhhHHH--------------HHHHHHHHcCC----ChhhhHhhhccCCcceeeeeecCC
Q 041077 70 RLFLALIPEDRRQLKFWPENPESFSQI--------------IFKAFARSINL----EENCFQDMFGEQTFMFGRFFWYPP 131 (257)
Q Consensus 70 ~~~~~~~p~~~~~~~~wP~~~~~f~~~--------------ll~~la~~Lgl----~~~~~~~~~~~~~~~~lr~~~Yp~ 131 (257)
.|.++.. +|.|| +|+|+++ ||++||++||+ ++++|.+. .+.||++||||
T Consensus 100 ~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~-----~~~lrl~~YPp 166 (311)
T 1dcs_A 100 CYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC-----EPLLRFRYFPQ 166 (311)
T ss_dssp EEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC-----CCEEEEEEECC
T ss_pred eeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc-----chhhheecCCC
Confidence 9988755 47899 8999887 99999999999 77877654 68899999999
Q ss_pred CCCCC--C--cccccccCCCCcEEEEecCC-CCCc---eEEeeCCeEEEecCCCCcEE--------EeeCCeecCCCcee
Q 041077 132 CLRPN--L--VLGVFPHTDGSGLTVLLPDK-EVEG---LQFLKDDQWYRVPVIPEAFV--------IMSNGIFKSPVHRV 195 (257)
Q Consensus 132 ~~~~~--~--~~g~~~HtD~~~lTlL~q~~-~~~G---LqV~~~g~W~~V~p~~g~lv--------~~Tng~~~s~~HRV 195 (257)
|+.++ . .+|+++|||+|+||||+| | +++| |||+.+|+|++|+|.||++| +||||+|+|+.|||
T Consensus 167 ~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRV 245 (311)
T 1dcs_A 167 VPEHRSAEEQPLRMAPHYDLSMVTLIQQ-TPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHV 245 (311)
T ss_dssp -----------CCEEEEEECSSEEEEEE-ECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEE
T ss_pred CCcccccCccccccccccCCCeEEEEec-CCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceE
Confidence 98763 3 678999999999999999 6 8999 99999999999999999999 99999999999999
Q ss_pred ccCC-----CCCeeEEEEeecCCCCceeec-cccCCCCCCCC--CChH--HHHHHHHHhhh
Q 041077 196 VTNS-----ERERMSVAVFCCPNPEKDIEP-GVVNEARPRLY--KTLN--NYNRLYFENLR 246 (257)
Q Consensus 196 ~~~~-----~~~R~S~~~F~~p~~d~~i~p-~~~~~~~~~~y--~~~~--e~~~~~~~~~~ 246 (257)
+.++ ..+|+|++||++|+.|++|+. +++++++|++| ++++ ||+..++++..
T Consensus 246 v~~~~~~~~~~~R~Si~~F~~p~~d~~i~l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 246 AAPRRDQIAGSSRTSSVFFLRPNADFTFSVPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp CCC----CTTCCEEEEEEEECCCTTCEEEHHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred eCCCcccCCCCCeEEEEEEEcCCCCcEEeCCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9987 678999999999999999995 88888899999 9999 99987766533
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.1e-54 Score=376.00 Aligned_cols=218 Identities=21% Similarity=0.317 Sum_probs=186.5
Q ss_pred hHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCCcccCCC-------CCCCChhhhhhhc
Q 041077 2 EKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKFFALPLEEKQKYAKQNGSDGGYGNDI-------HPTLNWSDRLFLA 74 (257)
Q Consensus 2 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~Gy~~~~-------~~~~d~~e~~~~~ 74 (257)
++|.+||++||||||+||||+.++++++++.+++||++ |+|+++...+...+||.+.. ....||+|.|.+.
T Consensus 16 ~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~~e~~~~~~~~D~kE~~~~~ 93 (280)
T 3on7_A 16 KRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASISETAKGHTVKDIKEYYHVY 93 (280)
T ss_dssp HHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC--------CCCCSCEEEEEC
T ss_pred HHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCccccccCCCCcccHHHHHhcC
Confidence 68999999999999999999999999999999999998 78998877666789997643 2357999987652
Q ss_pred cCCccccccCCCCCCchhhHHH--------------HHHHHHHHcCCCh--hh---hHhhhccCCcceeeeeecCCCCCC
Q 041077 75 LIPEDRRQLKFWPENPESFSQI--------------IFKAFARSINLEE--NC---FQDMFGEQTFMFGRFFWYPPCLRP 135 (257)
Q Consensus 75 ~~p~~~~~~~~wP~~~~~f~~~--------------ll~~la~~Lgl~~--~~---~~~~~~~~~~~~lr~~~Yp~~~~~ 135 (257)
.||..+++|+++ ||++||++||++. ++ +.+.+.....+.||++|||||+.+
T Consensus 94 ----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~ 163 (280)
T 3on7_A 94 ----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGD 163 (280)
T ss_dssp ----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTT
T ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCc
Confidence 277677888876 9999999999763 22 455553334589999999999865
Q ss_pred C--CcccccccCCCCcEEEEecCCCCCceEEe-eCCeEEEecCCCCcEE--------EeeCCeecCCCceeccCC----C
Q 041077 136 N--LVLGVFPHTDGSGLTVLLPDKEVEGLQFL-KDDQWYRVPVIPEAFV--------IMSNGIFKSPVHRVVTNS----E 200 (257)
Q Consensus 136 ~--~~~g~~~HtD~~~lTlL~q~~~~~GLqV~-~~g~W~~V~p~~g~lv--------~~Tng~~~s~~HRV~~~~----~ 200 (257)
+ ..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|.||++| +||||+|+|+.|||+.++ .
T Consensus 164 ~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~ 242 (280)
T 3on7_A 164 EEMGAIRAAAHEDINLITVLPT-ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKT 242 (280)
T ss_dssp CCCCSEEEEEECCCSSEEEEEC-CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTT
T ss_pred cccCcccccCCCCCCeEEEEEe-cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCC
Confidence 4 4789999999999999999 789999999 6899999999999999 999999999999999874 4
Q ss_pred CCeeEEEEeecCCCCceeeccccCCCCCCCCCChH--HHHHHHHHh
Q 041077 201 RERMSVAVFCCPNPEKDIEPGVVNEARPRLYKTLN--NYNRLYFEN 244 (257)
Q Consensus 201 ~~R~S~~~F~~p~~d~~i~p~~~~~~~~~~y~~~~--e~~~~~~~~ 244 (257)
.+|||++||++|+.|++|+| +++ ||+..+++.
T Consensus 243 ~~R~Si~~F~~P~~d~~i~p------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 243 KSRISLPLFLHPHPSVVLSE------------RYTADSYLMERLRE 276 (280)
T ss_dssp SCEEECCEEECCCTTCBCSS------------SCBHHHHHHHHHHH
T ss_pred CCeEEEEEEEcCCCCCEECC------------CccHHHHHHHHHHH
Confidence 58999999999999999976 256 999998886
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=96.13 E-value=0.035 Score=46.10 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHHcCCChhhhHhhhccCCcceeeeeecCCCCCCCCcccccccCCCC-----------cEEEEecCCC---
Q 041077 93 FSQIIFKAFARSINLEENCFQDMFGEQTFMFGRFFWYPPCLRPNLVLGVFPHTDGS-----------GLTVLLPDKE--- 158 (257)
Q Consensus 93 f~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~--- 158 (257)
+...+.+.|...|+....+....+ ......+++++|.+-. -..+|.|.. .+|+++..++
T Consensus 71 ~~~~l~~~i~~~l~~~~~f~~~~L-~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~ 143 (243)
T 3dkq_A 71 VAVALGQQIMDRLLAHPQFVSAAL-PLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPEN 143 (243)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHC-EEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGG
T ss_pred HHHHHHHHHHHHHccCcchhhccc-ccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCC
Confidence 556677777788777644333222 1223458889998732 366777763 4666665332
Q ss_pred -C-CceEEeeCCeEEEecCCCCcEEEeeCCeecCCCceeccCCCCCeeEEEEeecC
Q 041077 159 -V-EGLQFLKDDQWYRVPVIPEAFVIMSNGIFKSPVHRVVTNSERERMSVAVFCCP 212 (257)
Q Consensus 159 -~-~GLqV~~~g~W~~V~p~~g~lv~~Tng~~~s~~HRV~~~~~~~R~S~~~F~~p 212 (257)
. |.|.+.....=..|+|..|.+|++..+ .+|+|.......|++++.+++-
T Consensus 144 ~~GGetvf~~~~~~~~V~P~~G~~v~F~s~----~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 144 YQGGELVIQDTYGQQSIKLSAGSLVLYPSS----SLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp EEECCEEEEETTEEEEECCCTTCEEEEETT----SEEEECCEEEECEEEEEEEEEE
T ss_pred CCCceEEEeeCCCcEEEecCCCEEEEECCC----CeEcCccccccCEEEEEEehhh
Confidence 2 336666554457899999999966553 6899977555689999999873
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=94.63 E-value=0.11 Score=43.22 Aligned_cols=83 Identities=14% Similarity=0.152 Sum_probs=56.4
Q ss_pred ceeeeeecCCCCCCCCcccccccCCCC-----cEEEEecCCC-------CCceEEeeCC--eEEEecCCCCcEEEeeCCe
Q 041077 122 MFGRFFWYPPCLRPNLVLGVFPHTDGS-----GLTVLLPDKE-------VEGLQFLKDD--QWYRVPVIPEAFVIMSNGI 187 (257)
Q Consensus 122 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----~lTlL~q~~~-------~~GLqV~~~g--~W~~V~p~~g~lv~~Tng~ 187 (257)
.-+.+.+|++. .-...+|.|.. .+|+++..++ .|-|.++.++ ....|.|..|.+|++..+.
T Consensus 117 ~e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~ 191 (247)
T 2hbt_A 117 TKAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR 191 (247)
T ss_dssp CCEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST
T ss_pred ceEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC
Confidence 34677888761 12466777762 6888876332 3336777544 6789999999999554331
Q ss_pred ecCCCceeccCCCCCeeEEEEeecC
Q 041077 188 FKSPVHRVVTNSERERMSVAVFCCP 212 (257)
Q Consensus 188 ~~s~~HRV~~~~~~~R~S~~~F~~p 212 (257)
..+|.|.. ....|+||+.++.-
T Consensus 192 --~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 --RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp --TCCEEECC-BSSCEEEEEEEEEE
T ss_pred --Cceeeecc-CCCEEEEEEEEEcC
Confidence 26899976 45689999987764
No 9
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=93.69 E-value=0.79 Score=37.00 Aligned_cols=109 Identities=17% Similarity=0.075 Sum_probs=66.0
Q ss_pred cCCCCCCchhhHHHHHHHHHHHcCCChhhhHhhhccCCcceeeeeecCCCCCCCCcccccccCCC-----C--cEEEEec
Q 041077 83 LKFWPENPESFSQIIFKAFARSINLEENCFQDMFGEQTFMFGRFFWYPPCLRPNLVLGVFPHTDG-----S--GLTVLLP 155 (257)
Q Consensus 83 ~~~wP~~~~~f~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~-----~--~lTlL~q 155 (257)
...||. .|..-..+++.++...|.+. + ....+-+|+|.+- . ++++|.|. + ++++-+-
T Consensus 76 ~~pw~~-~P~~L~~l~~~~~~~~g~~~------~---~pn~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG 139 (211)
T 3i3q_A 76 NKPWPA-MPQSFHNLCQRAATAAGYPD------F---QPDACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG 139 (211)
T ss_dssp SSBCCC-CCHHHHHHHHHHHHHTTCTT------C---CCCEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE
T ss_pred CCCCCc-hHHHHHHHHHHHHHhcCCCC------c---CCCEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC
Confidence 345987 45544445555555555321 1 1133557889772 3 79999993 2 2233222
Q ss_pred CCCCCceEEee---CCeEEEecCCCCcEEEeeCCeecCCCceeccCCC-------CCeeEEEEee
Q 041077 156 DKEVEGLQFLK---DDQWYRVPVIPEAFVIMSNGIFKSPVHRVVTNSE-------RERMSVAVFC 210 (257)
Q Consensus 156 ~~~~~GLqV~~---~g~W~~V~p~~g~lv~~Tng~~~s~~HRV~~~~~-------~~R~S~~~F~ 210 (257)
...-+.+.. .+..+.+.-.+|+++++++..-. ..|.|..... ..|+|+.|=.
T Consensus 140 --~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 140 --LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTT-CCEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --CCeEEEEecccCCCceEEEECCCCCEEEECchHHc-eEeccCcccCCcCCCCCCCEEEEEeee
Confidence 222234432 35678888899999999877754 7899977542 3599998854
No 10
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.85 E-value=0.43 Score=38.65 Aligned_cols=43 Identities=19% Similarity=0.134 Sum_probs=33.5
Q ss_pred CeEEEecCCCCcEEEeeCCeecCCCceeccCC-CCCeeEEEEeecCCC
Q 041077 168 DQWYRVPVIPEAFVIMSNGIFKSPVHRVVTNS-ERERMSVAVFCCPNP 214 (257)
Q Consensus 168 g~W~~V~p~~g~lv~~Tng~~~s~~HRV~~~~-~~~R~S~~~F~~p~~ 214 (257)
..+..|.|.+|.+|++... ..|.|.... +.+|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~----l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW----LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT----SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC----CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4667899999999977544 589998864 468999999988765
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=91.59 E-value=0.55 Score=38.04 Aligned_cols=106 Identities=15% Similarity=0.079 Sum_probs=67.0
Q ss_pred hHHHHHHHHHHHcCCChhhhHhhhccCCcceeeeeecCCCCCCCCcccccccCCC--------------CcEEEEecCC-
Q 041077 93 FSQIIFKAFARSINLEENCFQDMFGEQTFMFGRFFWYPPCLRPNLVLGVFPHTDG--------------SGLTVLLPDK- 157 (257)
Q Consensus 93 f~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~--------------~~lTlL~q~~- 157 (257)
+...|.+.|+..+|++.. ....+++++|.+-. ...+|.|+ ..+|+++..+
T Consensus 78 ~~~~i~~ri~~~~gl~~~---------~~e~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd 142 (224)
T 2jig_A 78 VISKIEKRVAQVTMIPLE---------NHEGLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTT 142 (224)
T ss_dssp HHHHHHHHHHHHHTCCGG---------GBCCCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhCCCcc---------cccceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecC
Confidence 444566677777777632 12347788887732 35567774 2588886533
Q ss_pred -CCCc-eEEeeCC-------------eEEEecCCCCcEEEeeC----Cee-cCCCceeccCCCCCeeEEEEeecCC
Q 041077 158 -EVEG-LQFLKDD-------------QWYRVPVIPEAFVIMSN----GIF-KSPVHRVVTNSERERMSVAVFCCPN 213 (257)
Q Consensus 158 -~~~G-LqV~~~g-------------~W~~V~p~~g~lv~~Tn----g~~-~s~~HRV~~~~~~~R~S~~~F~~p~ 213 (257)
..|| +.+...+ .-+.|.|..|.+|+|-| |.. ..++|+|.......|+++..+++-.
T Consensus 143 ~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 143 VEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp CSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred CCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 3444 3332211 24899999998885543 433 5789998765456899999988754
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=91.10 E-value=0.81 Score=37.07 Aligned_cols=106 Identities=13% Similarity=-0.027 Sum_probs=67.6
Q ss_pred hhhHHHHHHHHHHHcCCChhhhHhhhccCCcceeeeeecCCCCCCCCcccccccCCCC-----------cEEEEecCC--
Q 041077 91 ESFSQIIFKAFARSINLEENCFQDMFGEQTFMFGRFFWYPPCLRPNLVLGVFPHTDGS-----------GLTVLLPDK-- 157 (257)
Q Consensus 91 ~~f~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~~-----------~lTlL~q~~-- 157 (257)
..+...|.+-|+..+|++.. ....+++.+|.+.. -..+|.|+. .+|+++..+
T Consensus 89 ~~~v~~i~~Ri~~~~gl~~~---------~~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~ 153 (216)
T 3itq_A 89 NELTAKIEKRISSIMNVPAS---------HGEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDV 153 (216)
T ss_dssp CHHHHHHHHHHHHHHTSCGG---------GBCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCC
T ss_pred cHHHHHHHHHHHHhcCceec---------cccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccC
Confidence 34445577777777888632 12457788887632 256777753 478887633
Q ss_pred CCCceEEeeCCeEEEecCCCCcEEEeeCC----e-ecCCCceeccCCCCCeeEEEEeecC
Q 041077 158 EVEGLQFLKDDQWYRVPVIPEAFVIMSNG----I-FKSPVHRVVTNSERERMSVAVFCCP 212 (257)
Q Consensus 158 ~~~GLqV~~~g~W~~V~p~~g~lv~~Tng----~-~~s~~HRV~~~~~~~R~S~~~F~~p 212 (257)
..||==+..+ .=+.|.|..|..|+|-|- . -..++|++.......|+++..+++-
T Consensus 154 ~~GGeT~Fp~-~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 154 EEGGETFFPK-LNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp SEECCEEETT-TTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred CcCceeEecC-CCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEec
Confidence 3444333322 127899999998866651 1 1468999876555689999988763
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=89.44 E-value=1 Score=36.03 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=52.3
Q ss_pred eeeeeecCCCCCCCCcccccccCCCC-------cE-EEEecCCCCCceEEee----------CCeEEEecCCCCcEEEee
Q 041077 123 FGRFFWYPPCLRPNLVLGVFPHTDGS-------GL-TVLLPDKEVEGLQFLK----------DDQWYRVPVIPEAFVIMS 184 (257)
Q Consensus 123 ~lr~~~Yp~~~~~~~~~g~~~HtD~~-------~l-TlL~q~~~~~GLqV~~----------~g~W~~V~p~~g~lv~~T 184 (257)
.+-+|+|.+-. -++++|.|-. .| ++-+. ...-+.+.. .+..+.+.-.+|++++++
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~ 173 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMN 173 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEE
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEEC
Confidence 34579998832 2788999862 12 22222 222233332 124678888899999999
Q ss_pred CCeecCCCceeccCC--CCCeeEEEEe
Q 041077 185 NGIFKSPVHRVVTNS--ERERMSVAVF 209 (257)
Q Consensus 185 ng~~~s~~HRV~~~~--~~~R~S~~~F 209 (257)
++.-..-.|.|-... ...|+|+.|=
T Consensus 174 g~~q~~w~H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 174 HPTNTHWYHSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp TTHHHHEEEEECCCTTCCSCEEEEEEE
T ss_pred chhhheeEeeccccCCCCCCEEEEEee
Confidence 988777789987653 3679999873
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=84.58 E-value=2.5 Score=34.67 Aligned_cols=82 Identities=15% Similarity=0.067 Sum_probs=53.7
Q ss_pred ceeeeeecCCCCCCCCcccccccCCCC--------cEEEEecCCCCCceEEee-C----------CeEEEecCCCCcEEE
Q 041077 122 MFGRFFWYPPCLRPNLVLGVFPHTDGS--------GLTVLLPDKEVEGLQFLK-D----------DQWYRVPVIPEAFVI 182 (257)
Q Consensus 122 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~--------~lTlL~q~~~~~GLqV~~-~----------g~W~~V~p~~g~lv~ 182 (257)
..+-+|+|.+-. -++++|.|-. +.||-+. ...=+.+.. . +..+.+.-.+|++++
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 345679998732 2789999852 2222222 112233332 1 368889999999999
Q ss_pred eeCCeecCCCceeccCC--CCCeeEEEEee
Q 041077 183 MSNGIFKSPVHRVVTNS--ERERMSVAVFC 210 (257)
Q Consensus 183 ~Tng~~~s~~HRV~~~~--~~~R~S~~~F~ 210 (257)
|++..-..-.|.|.... ...|+|+.|=.
T Consensus 199 M~G~~r~~w~H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp EEETHHHHEEEEECCCSSCCCCEEEEEEEC
T ss_pred EChhhhCccEecCCCcCCCCCCEEEEEeee
Confidence 99887776679986542 46899999854
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=84.36 E-value=3.6 Score=35.71 Aligned_cols=68 Identities=16% Similarity=0.087 Sum_probs=43.1
Q ss_pred ceeeeeecCCCCCCCCcccccccCCCC------cEEEEecCCCCCceEEe-eCCeEEEecCCCCcEEEeeCCeecCCCce
Q 041077 122 MFGRFFWYPPCLRPNLVLGVFPHTDGS------GLTVLLPDKEVEGLQFL-KDDQWYRVPVIPEAFVIMSNGIFKSPVHR 194 (257)
Q Consensus 122 ~~lr~~~Yp~~~~~~~~~g~~~HtD~~------~lTlL~q~~~~~GLqV~-~~g~W~~V~p~~g~lv~~Tng~~~s~~HR 194 (257)
..+-+|+|.+- -++++|.|.. +.|+=+- ...-+.+. ++|.++.+.-.+|++++|++.....-.|.
T Consensus 198 n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~ 269 (345)
T 3tht_A 198 DQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHG 269 (345)
T ss_dssp SEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEE
T ss_pred CEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEcc
Confidence 34567889772 2799999984 2222222 22234444 35678899999999997777666555566
Q ss_pred ecc
Q 041077 195 VVT 197 (257)
Q Consensus 195 V~~ 197 (257)
|-.
T Consensus 270 I~~ 272 (345)
T 3tht_A 270 ITC 272 (345)
T ss_dssp ECC
T ss_pred CCc
Confidence 643
No 16
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=55.51 E-value=17 Score=34.02 Aligned_cols=100 Identities=12% Similarity=0.043 Sum_probs=60.2
Q ss_pred HHHHHHHHcCCChhhhHhhhccCCcceeeeeecCCCCCCCCcccccccCCC-C--cEEEEecCC---------CCCceEE
Q 041077 97 IFKAFARSINLEENCFQDMFGEQTFMFGRFFWYPPCLRPNLVLGVFPHTDG-S--GLTVLLPDK---------EVEGLQF 164 (257)
Q Consensus 97 ll~~la~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~-~--~lTlL~q~~---------~~~GLqV 164 (257)
++..|+...|++.= . ....-+.+.+|++- -.+..|.|. + -||+++.-+ ..|-|++
T Consensus 106 Fr~~Ls~iTGi~~L-----s--g~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 106 YRDFFGYVTKAGKL-----S--GSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHTCCCC-----C--SSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHhCCccc-----C--CCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 66777777776310 0 01233567788762 357889995 2 356665422 2344888
Q ss_pred eeC--------CeEEEecCCCCcEE-EeeC-CeecCCCceeccC-CCCCeeEEEEeecC
Q 041077 165 LKD--------DQWYRVPVIPEAFV-IMSN-GIFKSPVHRVVTN-SERERMSVAVFCCP 212 (257)
Q Consensus 165 ~~~--------g~W~~V~p~~g~lv-~~Tn-g~~~s~~HRV~~~-~~~~R~S~~~F~~p 212 (257)
+.. .....|.|..|.+| ..+. + ..+|.|... ++..|+||+-.++-
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp~---~S~H~V~eV~~~~~RlSItGWF~~ 228 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFFKVLPG---FSFHDXEEVKVDKHRLSIQGWYHI 228 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEEECCTT---TCCEEECCBCSSCCEEEEEEEEEC
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEEEcCCC---CCcCCCCccCCCCCEEEEEEEecc
Confidence 732 24678999999999 4443 3 246765332 26789999876653
No 17
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=48.21 E-value=1.1e+02 Score=25.09 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=26.5
Q ss_pred hHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHH
Q 041077 2 EKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKF 36 (257)
Q Consensus 2 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f 36 (257)
++..+.+.+.||+.|.+- ++.+.++++.+.+...
T Consensus 12 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~ 45 (313)
T 2fct_A 12 AEQRASFEKNGFIGPFDA-YSPEEMKETWKRTRLR 45 (313)
T ss_dssp HHHHHHHHHHSEEEEEES-SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEECCCC-CCHHHHHHHHHHHHHH
Confidence 355678999999988874 6888899988766544
No 18
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=43.99 E-value=39 Score=28.42 Aligned_cols=65 Identities=20% Similarity=0.149 Sum_probs=44.4
Q ss_pred cccccCCC--------CcEEEEecCCCCCceEEeeCCeEEEecCCCCcEEEeeCCeecCCCceeccCCCCCeeEEEEee
Q 041077 140 GVFPHTDG--------SGLTVLLPDKEVEGLQFLKDDQWYRVPVIPEAFVIMSNGIFKSPVHRVVTNSERERMSVAVFC 210 (257)
Q Consensus 140 g~~~HtD~--------~~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~lv~~Tng~~~s~~HRV~~~~~~~R~S~~~F~ 210 (257)
.+.+|.|. +.+.++..-..-+|....-+|+-+..++ |.+..+-+ +..|.|...++.+|+.+.+=+
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d~----~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLDA----ATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECCT----TSCEEEEESSSSCCCEEEEEE
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEcC----CCeeEEEcCCCCCeEEEEEEe
Confidence 58899998 3455555433566666666665555544 65554442 458999999999999998766
No 19
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=36.78 E-value=73 Score=25.04 Aligned_cols=69 Identities=22% Similarity=0.191 Sum_probs=38.5
Q ss_pred cccccCCCC--cEEEEecCCCC-CceEEeeCCeEEEecCCCCcEEEeeCCeecCCCceeccCCCCCeeEEEE-eecCCC
Q 041077 140 GVFPHTDGS--GLTVLLPDKEV-EGLQFLKDDQWYRVPVIPEAFVIMSNGIFKSPVHRVVTNSERERMSVAV-FCCPNP 214 (257)
Q Consensus 140 g~~~HtD~~--~lTlL~q~~~~-~GLqV~~~g~W~~V~p~~g~lv~~Tng~~~s~~HRV~~~~~~~R~S~~~-F~~p~~ 214 (257)
.+.+|+|.. .++++..-..- .|-.+.-+|+...- .+|.++++-. +-.|.|...++..|+-+.+ |.+|+.
T Consensus 114 ~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~~~~~w--~eGe~~~fDd----s~~Hev~N~~d~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 114 HVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANETKTW--EEGKVLIFDD----SFEHEVWQDASSFRLIFIVDVWHPEL 186 (197)
T ss_dssp EEEEECCSCTTEEEEEEEEECCSSSEEEEETTEEECC--CBTCEEEECT----TSCEEEEECSSSCEEEEEEEEECTTS
T ss_pred CcCCeeCCCCCeEEEEEEEEeCCCCcEEEECCEEEEe--eCCcEEEEcC----CeEEEEEECCCCCEEEEEEeeeCCCC
Confidence 588899886 56666541001 13333323332222 2344433332 5689999888888988766 666655
No 20
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=27.15 E-value=1.1e+02 Score=24.79 Aligned_cols=37 Identities=5% Similarity=-0.129 Sum_probs=30.3
Q ss_pred hHHHHHhhhccEEEEEccCCCHHHHHHHHHHHHHHhcC
Q 041077 2 EKLGTALCFWGCFQAINHGIEPAFLDKVREVTKKFFAL 39 (257)
Q Consensus 2 ~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 39 (257)
++..+.+.+.||+.|.|- ++.+.++.+.+.+.++++.
T Consensus 6 ~e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~~ 42 (291)
T 2opw_A 6 PSQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVAE 42 (291)
T ss_dssp HHHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHhh
Confidence 356788999999988864 7899999999988887753
No 21
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=26.17 E-value=59 Score=16.74 Aligned_cols=13 Identities=15% Similarity=0.222 Sum_probs=10.0
Q ss_pred eEEeeCCeEEEec
Q 041077 162 LQFLKDDQWYRVP 174 (257)
Q Consensus 162 LqV~~~g~W~~V~ 174 (257)
.-|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4577899999764
No 22
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=25.57 E-value=2.3e+02 Score=21.68 Aligned_cols=64 Identities=13% Similarity=0.201 Sum_probs=40.7
Q ss_pred ccccCCCCcEEEEecCCCCCceEEeeCCeEEEecCCCCcEEEeeCCeecCCCceeccCCCCCeeE-EEEeecC
Q 041077 141 VFPHTDGSGLTVLLPDKEVEGLQFLKDDQWYRVPVIPEAFVIMSNGIFKSPVHRVVTNSERERMS-VAVFCCP 212 (257)
Q Consensus 141 ~~~HtD~~~lTlL~q~~~~~GLqV~~~g~W~~V~p~~g~lv~~Tng~~~s~~HRV~~~~~~~R~S-~~~F~~p 212 (257)
.-.|.+ .=+.++.. +.+-+.|..+|.|+.+...+|.+|++-.| +.|+.....+ .++. +-+|..+
T Consensus 95 ~H~H~~-~Ei~~Vl~--G~g~~~i~~~d~~~~~~l~~GDli~IP~g----~~H~~~~~~~-~~~~~ir~F~~~ 159 (179)
T 1zrr_A 95 EHTHGE-DEVRFFVE--GAGLFCLHIGDEVFQVLCEKNDLISVPAH----TPHWFDMGSE-PNFTAIRIFDNP 159 (179)
T ss_dssp CBEESS-CEEEEEEE--SCCCCCEECSSCEEEEECCCSCEEEECTT----CCBCCCCSSC-SSCEEEEEECCG
T ss_pred ceECCh-heEEEEEc--ceEEEEEEeCCEEEEEEECCCCEEEECCC----CeEeeecCCC-ceEEEEEeccCC
Confidence 344554 45566665 55556666678998888888999977766 4688766444 3454 4455444
No 23
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=20.56 E-value=2.1e+02 Score=23.48 Aligned_cols=76 Identities=21% Similarity=0.279 Sum_probs=41.1
Q ss_pred CcccccccCCCCcEEEEecCCCCCceEEee-CCeEEEecCCCCcEEEeeCCeecCCCceeccCCCCCeeEEEEeec-CCC
Q 041077 137 LVLGVFPHTDGSGLTVLLPDKEVEGLQFLK-DDQWYRVPVIPEAFVIMSNGIFKSPVHRVVTNSERERMSVAVFCC-PNP 214 (257)
Q Consensus 137 ~~~g~~~HtD~~~lTlL~q~~~~~GLqV~~-~g~W~~V~p~~g~lv~~Tng~~~s~~HRV~~~~~~~R~S~~~F~~-p~~ 214 (257)
..++.-||.+.-++|++++ +.++=.+ -|+--.+ .+|.+-++|-| +...|-=....+..---+-++.+ |..
T Consensus 50 ~gf~~HPHrg~EtVTyvl~----G~~~H~DS~Gn~~~i--~~GdvQwMtAG--~GI~HsE~~~~~~~~~~lQlWvnLP~~ 121 (277)
T 2p17_A 50 GTFDVHPHRGIETVTYVIS----GELEHFDSKAGHSTL--GPGDVQWMTAG--RGVVHKEDPASGSTVHSLQLWVNLPSA 121 (277)
T ss_dssp TCCCCEEECSEEEEEEEEE----SCEEEEETTTEEEEE--CTTCEEEEECT--TCEEEEEEECTTCCEEEEEEEEECCGG
T ss_pred CCCCCCCCCCcEEEEEEEE----eEEEEeeCCCCceEE--CCCeEEEEeCC--CCEEEEeecCCCCCEEEEEEEeeCChh
Confidence 4677889999999999998 2333332 2443333 23555555555 33345444333223334555554 444
Q ss_pred Cceeec
Q 041077 215 EKDIEP 220 (257)
Q Consensus 215 d~~i~p 220 (257)
+.+++|
T Consensus 122 ~k~~~P 127 (277)
T 2p17_A 122 YKMTEP 127 (277)
T ss_dssp GTTCCC
T ss_pred hcCCCC
Confidence 455555
Done!