Query         041080
Match_columns 247
No_of_seqs    174 out of 1592
Neff          10.8
Searched_HMMs 29240
Date          Mon Mar 25 05:31:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041080.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041080hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4b9d_A Serine/threonine-protei 100.0   8E-61 2.7E-65  382.6  21.2  233    1-238    48-285 (350)
  2 4fih_A Serine/threonine-protei 100.0 4.2E-60 1.4E-64  377.9  22.5  229    1-236    98-330 (346)
  3 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.6E-60 1.9E-64  372.0  20.6  231    1-236    56-297 (311)
  4 3hyh_A Carbon catabolite-derep 100.0 2.3E-59 7.8E-64  363.7  22.8  233    1-238    37-271 (275)
  5 3fpq_A Serine/threonine-protei 100.0 1.2E-58 4.1E-63  362.6  24.4  229    1-235    50-288 (290)
  6 4fie_A Serine/threonine-protei 100.0 1.2E-58   4E-63  378.1  23.5  229    1-236   175-407 (423)
  7 3ubd_A Ribosomal protein S6 ki 100.0 6.3E-59 2.2E-63  365.9  17.4  229    2-236    52-288 (304)
  8 4g3f_A NF-kappa-beta-inducing  100.0 7.7E-57 2.6E-61  358.1  21.1  225    1-237    82-330 (336)
  9 4asz_A BDNF/NT-3 growth factor 100.0 5.8E-56   2E-60  349.6  20.1  221    1-228    42-281 (299)
 10 4aoj_A High affinity nerve gro 100.0 3.4E-55 1.2E-59  349.6  22.5  223    1-230    70-313 (329)
 11 4gt4_A Tyrosine-protein kinase 100.0 4.3E-55 1.5E-59  346.0  20.3  223    2-230    56-300 (308)
 12 4g31_A Eukaryotic translation  100.0 5.4E-55 1.9E-59  344.5  20.4  227    1-236    29-286 (299)
 13 4b99_A Mitogen-activated prote 100.0 2.1E-53 7.3E-58  347.3  23.8  232    1-237    78-352 (398)
 14 3omv_A RAF proto-oncogene seri 100.0 2.4E-53 8.1E-58  334.9  23.3  223    3-229    59-293 (307)
 15 3v5w_A G-protein coupled recep 100.0 3.3E-53 1.1E-57  360.8  22.0  234    1-236   213-456 (689)
 16 4f9c_A Cell division cycle 7-r 100.0 3.4E-52 1.2E-56  336.7  22.8  225    2-236    49-359 (361)
 17 3uto_A Twitchin; kinase, muscl 100.0 1.5E-51 5.1E-56  351.2  23.2  232    1-239   181-420 (573)
 18 4ase_A Vascular endothelial gr 100.0 5.6E-52 1.9E-56  333.6  18.0  223    2-230    94-341 (353)
 19 3fe3_A MAP/microtubule affinit 100.0 8.4E-50 2.9E-54  320.1  26.1  232    1-237    39-272 (328)
 20 3fxz_A Serine/threonine-protei 100.0 2.1E-49 7.2E-54  314.0  23.6  230    1-237    44-277 (297)
 21 3zgw_A Maternal embryonic leuc 100.0 1.9E-49 6.5E-54  319.9  21.6  233    1-239    34-270 (347)
 22 1o6l_A RAC-beta serine/threoni 100.0 8.1E-49 2.8E-53  315.3  24.0  231    1-236    29-267 (337)
 23 2yab_A Death-associated protei 100.0   2E-48 6.9E-53  315.6  25.0  234    1-236    36-279 (361)
 24 1fot_A TPK1 delta, CAMP-depend 100.0 1.9E-48 6.6E-53  311.0  23.9  230    1-236    30-265 (318)
 25 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.4E-49 2.5E-53  317.4  20.7  231    1-236    47-287 (353)
 26 2c30_A Serine/threonine-protei 100.0 4.7E-48 1.6E-52  309.5  23.9  229    1-236    69-301 (321)
 27 3hmm_A TGF-beta receptor type- 100.0 4.7E-49 1.6E-53  311.9  17.4  223    1-229    25-290 (303)
 28 2y0a_A Death-associated protei 100.0 7.9E-48 2.7E-52  308.8  24.3  234    1-236    35-278 (326)
 29 3soa_A Calcium/calmodulin-depe 100.0 1.1E-47 3.7E-52  318.9  25.9  230    1-235    35-273 (444)
 30 1xjd_A Protein kinase C, theta 100.0 3.1E-48   1E-52  312.8  21.8  231    1-236    41-276 (345)
 31 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.7E-48 1.6E-52  312.5  22.5  229    1-235    65-299 (350)
 32 3gni_B Strad alpha; kinase fol 100.0 1.2E-47 4.1E-52  314.8  24.9  234    1-237    51-341 (389)
 33 4dc2_A Protein kinase C IOTA t 100.0 5.1E-48 1.8E-52  316.1  22.5  231    1-236    76-325 (396)
 34 3niz_A Rhodanese family protei 100.0 1.1E-47 3.9E-52  305.9  24.0  233    1-238    44-309 (311)
 35 3a8x_A Protein kinase C IOTA t 100.0 1.6E-47 5.4E-52  308.9  25.0  231    1-236    33-282 (345)
 36 3fdn_A Serine/threonine-protei 100.0 4.9E-48 1.7E-52  303.6  20.7  238    1-243    33-272 (279)
 37 3c0i_A Peripheral plasma membr 100.0 3.6E-48 1.2E-52  313.7  20.3  232    1-235    48-292 (351)
 38 2zv2_A Calcium/calmodulin-depe 100.0 3.8E-48 1.3E-52  307.0  20.1  235    1-235    37-298 (298)
 39 3a62_A Ribosomal protein S6 ki 100.0 1.5E-47 5.1E-52  307.3  23.7  232    1-236    44-283 (327)
 40 2bdw_A Hypothetical protein K1 100.0 1.6E-47 5.4E-52  311.0  23.9  230    1-235    53-290 (362)
 41 2eue_A Carbon catabolite derep 100.0 1.1E-47 3.6E-52  301.1  20.7  233    1-238    37-271 (275)
 42 1tki_A Titin; serine kinase, m 100.0 4.6E-48 1.6E-52  309.4  18.9  228    1-236    29-264 (321)
 43 3v8s_A RHO-associated protein  100.0 4.2E-48 1.4E-52  318.2  18.7  234    1-236    93-336 (410)
 44 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.4E-48 8.3E-53  312.3  16.5  233    1-238    33-267 (336)
 45 2i0e_A Protein kinase C-beta I 100.0 1.8E-47 6.2E-52  309.2  21.6  229    2-235    45-282 (353)
 46 4fr4_A YANK1, serine/threonine 100.0 2.7E-47 9.2E-52  310.9  22.4  233    1-236    39-278 (384)
 47 3hko_A Calcium/calmodulin-depe 100.0 6.3E-48 2.2E-52  311.6  18.6  237    1-237    50-338 (345)
 48 3tki_A Serine/threonine-protei 100.0 1.7E-47 5.8E-52  306.4  20.6  235    1-240    31-272 (323)
 49 2y94_A 5'-AMP-activated protei 100.0   2E-47   7E-52  319.3  21.7  234    1-238    40-275 (476)
 50 3o0g_A Cell division protein k 100.0 9.3E-47 3.2E-51  298.2  24.2  231    1-236    26-289 (292)
 51 1ob3_A PFPK5, cell division co 100.0 2.9E-47 9.9E-52  300.5  20.9  231    1-236    25-287 (288)
 52 2vgo_A Serine/threonine-protei 100.0 2.6E-47 8.8E-52  300.2  20.2  233    1-238    38-271 (284)
 53 2x4f_A Myosin light chain kina 100.0 4.2E-47 1.4E-51  309.5  22.0  228    1-235   113-348 (373)
 54 3kk8_A Calcium/calmodulin depe 100.0   2E-46 6.7E-51  295.1  25.1  231    1-236    30-268 (284)
 55 4ejn_A RAC-alpha serine/threon 100.0 2.6E-47 8.8E-52  317.9  20.4  231    1-236   172-411 (446)
 56 2pmi_A Negative RE, cyclin-dep 100.0 5.3E-47 1.8E-51  302.9  21.3  231    1-237    29-301 (317)
 57 2a2a_A Death-associated protei 100.0 1.4E-46 4.7E-51  301.0  23.7  234    1-236    36-279 (321)
 58 2jam_A Calcium/calmodulin-depe 100.0 1.6E-46 5.4E-51  298.5  23.7  231    1-238    33-270 (304)
 59 3is5_A Calcium-dependent prote 100.0 1.9E-46 6.4E-51  295.5  23.6  228    1-235    46-284 (285)
 60 3f3z_A Calcium/calmodulin-depe 100.0 9.3E-47 3.2E-51  296.0  21.4  230    1-238    33-270 (277)
 61 4agu_A Cyclin-dependent kinase 100.0 1.2E-46 4.1E-51  300.0  22.3  233    1-237    27-292 (311)
 62 2r5t_A Serine/threonine-protei 100.0 9.7E-47 3.3E-51  306.9  22.0  231    1-236    62-300 (373)
 63 1cm8_A Phosphorylated MAP kina 100.0 2.1E-46 7.3E-51  304.9  24.0  231    1-237    49-315 (367)
 64 3g33_A Cell division protein k 100.0 1.3E-46 4.3E-51  299.5  22.2  233    1-236    33-303 (308)
 65 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-46 4.9E-51  298.6  22.1  231    1-237    46-278 (303)
 66 2y7j_A Phosphorylase B kinase  100.0 2.7E-46 9.3E-51  304.1  24.2  235    1-235   118-365 (365)
 67 2rku_A Serine/threonine-protei 100.0 7.8E-46 2.7E-50  293.1  26.1  235    1-240    39-276 (294)
 68 3oz6_A Mitogen-activated prote 100.0 1.2E-46   4E-51  308.8  22.1  231    1-236    33-335 (388)
 69 3cok_A Serine/threonine-protei 100.0 7.1E-47 2.4E-51  296.8  19.9  232    1-237    35-270 (278)
 70 3kn6_A Ribosomal protein S6 ki 100.0 3.4E-46 1.2E-50  299.1  24.1  227    1-237    35-278 (325)
 71 1t4h_A Serine/threonine-protei 100.0 4.7E-46 1.6E-50  293.8  24.3  230    1-236    50-289 (290)
 72 1kob_A Twitchin; kinase, intra 100.0 1.9E-46 6.5E-51  306.6  22.6  230    1-237    75-312 (387)
 73 3uc3_A Serine/threonine-protei 100.0 3.8E-46 1.3E-50  302.8  24.1  231    1-238    44-283 (361)
 74 1u5q_A Serine/threonine protei 100.0 3.6E-46 1.2E-50  301.5  23.5  232    1-237    78-313 (348)
 75 1x8b_A WEE1HU, WEE1-like prote 100.0 6.1E-46 2.1E-50  292.6  24.2  228    1-237    35-287 (289)
 76 2vd5_A DMPK protein; serine/th 100.0 6.2E-47 2.1E-51  311.4  19.2  233    1-236    85-334 (412)
 77 2w5a_A Serine/threonine-protei 100.0 1.1E-46 3.6E-51  295.9  19.6  234    1-239    30-277 (279)
 78 4aw2_A Serine/threonine-protei 100.0 5.3E-47 1.8E-51  313.8  18.7  234    1-236    98-345 (437)
 79 2owb_A Serine/threonine-protei 100.0 9.4E-46 3.2E-50  297.8  25.5  234    1-239    65-301 (335)
 80 2h6d_A 5'-AMP-activated protei 100.0 1.4E-46 4.8E-51  294.8  20.1  234    1-238    35-270 (276)
 81 3qd2_B Eukaryotic translation  100.0 1.2E-46   4E-51  302.4  20.2  227    1-235    30-331 (332)
 82 2yex_A Serine/threonine-protei 100.0 3.9E-46 1.3E-50  292.2  22.5  235    1-240    31-272 (276)
 83 2acx_A G protein-coupled recep 100.0 1.1E-46 3.8E-51  319.3  20.0  230    1-235   208-450 (576)
 84 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-46 5.1E-51  301.8  19.5  232    1-237    58-326 (329)
 85 1ua2_A CAK, cell division prot 100.0 4.1E-46 1.4E-50  301.2  21.9  234    1-236    34-298 (346)
 86 2w4o_A Calcium/calmodulin-depe 100.0 4.7E-46 1.6E-50  301.0  21.6  229    1-238    77-314 (349)
 87 3ttj_A Mitogen-activated prote 100.0 1.9E-46 6.5E-51  313.5  19.8  229    1-236    86-362 (464)
 88 1phk_A Phosphorylase kinase; g 100.0 1.4E-45 4.6E-50  292.2  23.4  237    1-237    41-291 (298)
 89 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.6E-46 1.6E-50  314.6  22.0  230    1-235   209-454 (543)
 90 3p86_A Serine/threonine-protei 100.0 8.9E-46   3E-50  294.7  22.4  235    1-240    59-304 (309)
 91 3eqc_A Dual specificity mitoge 100.0 4.2E-46 1.5E-50  302.6  20.8  230    1-236    57-331 (360)
 92 2ac3_A MAP kinase-interacting  100.0 5.4E-46 1.8E-50  296.9  21.0  230    1-236    37-302 (316)
 93 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-45 4.2E-50  294.3  22.9  226    1-236    81-311 (311)
 94 3dls_A PAS domain-containing s 100.0 1.9E-46 6.7E-51  301.7  18.3  229    1-237    48-282 (335)
 95 3pfq_A PKC-B, PKC-beta, protei 100.0 9.2E-46 3.1E-50  321.5  23.8  231    1-236   365-604 (674)
 96 3mwu_A Calmodulin-domain prote 100.0 6.7E-46 2.3E-50  312.5  22.2  231    1-237    46-284 (486)
 97 3qyz_A Mitogen-activated prote 100.0 1.6E-45 5.4E-50  299.7  23.6  231    1-237    51-321 (364)
 98 2clq_A Mitogen-activated prote 100.0 1.5E-45   5E-50  291.6  22.6  233    1-238    46-287 (295)
 99 3lij_A Calcium/calmodulin depe 100.0 1.5E-45   5E-50  311.0  23.9  229    1-235    61-297 (494)
100 3bhy_A Death-associated protei 100.0   1E-45 3.5E-50  290.9  21.3  235    1-237    29-273 (283)
101 4aaa_A Cyclin-dependent kinase 100.0   6E-46   2E-50  298.5  20.3  232    1-236    49-313 (331)
102 3q5i_A Protein kinase; CDPK, m 100.0 1.4E-45 4.9E-50  311.7  23.4  235    1-238    60-310 (504)
103 3mtl_A Cell division protein k 100.0 1.7E-46 5.8E-51  300.8  16.4  232    1-238    26-290 (324)
104 2psq_A Fibroblast growth facto 100.0 1.8E-45 6.1E-50  299.8  22.5  223    2-230   113-358 (370)
105 2qr7_A Ribosomal protein S6 ki 100.0 7.9E-46 2.7E-50  298.7  19.9  224    1-235    46-283 (342)
106 3dbq_A Dual specificity protei 100.0 2.6E-45   9E-50  296.1  22.6  231    1-236    32-280 (343)
107 2j7t_A Serine/threonine-protei 100.0 1.5E-45 5.1E-50  292.5  20.6  232    1-237    43-283 (302)
108 3nyv_A Calmodulin-domain prote 100.0 4.1E-46 1.4E-50  313.8  18.3  231    1-236    50-288 (484)
109 3llt_A Serine/threonine kinase 100.0 2.6E-45   9E-50  298.0  22.4  224    1-234    59-360 (360)
110 3lm5_A Serine/threonine-protei 100.0 1.4E-45 4.8E-50  295.9  20.2  231    1-236    53-294 (327)
111 2fst_X Mitogen-activated prote 100.0 7.4E-46 2.5E-50  301.6  18.7  231    1-237    53-319 (367)
112 3com_A Serine/threonine-protei 100.0 4.6E-45 1.6E-49  291.3  22.7  227    1-236    53-285 (314)
113 3n9x_A Phosphotransferase; mal 100.0   1E-44 3.5E-49  301.0  25.6  232    1-237    50-369 (432)
114 3rp9_A Mitogen-activated prote 100.0 2.2E-45 7.4E-50  307.4  21.3  232    1-237    77-404 (458)
115 3fme_A Dual specificity mitoge 100.0 2.9E-45   1E-49  289.2  20.9  231    1-235    31-272 (290)
116 2r3i_A Cell division protein k 100.0 4.9E-45 1.7E-49  289.1  22.1  232    1-237    27-291 (299)
117 1vzo_A Ribosomal protein S6 ki 100.0 6.7E-46 2.3E-50  300.8  17.4  234    1-236    81-328 (355)
118 1nxk_A MAP kinase-activated pr 100.0 2.4E-45 8.2E-50  301.8  20.6  225    1-237    86-329 (400)
119 3mi9_A Cell division protein k 100.0   4E-45 1.4E-49  295.9  21.6  231    1-236    41-318 (351)
120 2wtk_C Serine/threonine-protei 100.0 3.3E-45 1.1E-49  290.9  20.7  235    1-238    29-272 (305)
121 2zmd_A Dual specificity protei 100.0 7.9E-45 2.7E-49  297.9  23.4  230    2-236    80-327 (390)
122 2pml_X PFPK7, Ser/Thr protein  100.0 5.5E-46 1.9E-50  300.6  16.2  234    1-236    53-329 (348)
123 3i6u_A CDS1, serine/threonine- 100.0 1.7E-45 5.7E-50  304.5  19.4  234    1-235   159-405 (419)
124 3byv_A Rhoptry kinase; malaria 100.0 1.8E-46   6E-51  306.6  13.2  225    1-235    97-365 (377)
125 2vwi_A Serine/threonine-protei 100.0 7.7E-46 2.6E-50  294.2  16.6  231    1-236    39-294 (303)
126 2xrw_A Mitogen-activated prote 100.0 2.9E-45   1E-49  298.8  20.3  229    1-236    49-325 (371)
127 3kul_A Ephrin type-A receptor  100.0 5.9E-45   2E-49  291.9  21.1  222    2-229    77-306 (325)
128 4eqm_A Protein kinase; transfe 100.0 1.4E-44 4.7E-49  286.0  22.6  231    1-235    35-273 (294)
129 3l9p_A Anaplastic lymphoma kin 100.0 2.7E-45 9.3E-50  298.5  19.0  226    2-233   101-342 (367)
130 4hcu_A Tyrosine-protein kinase 100.0 6.4E-45 2.2E-49  284.4  20.3  222    1-230    33-260 (269)
131 3tt0_A Basic fibroblast growth 100.0 1.1E-44 3.6E-49  296.6  22.3  222    3-230   102-346 (382)
132 3qup_A Tyrosine-protein kinase 100.0 6.5E-45 2.2E-49  291.5  20.6  232    4-240    53-309 (323)
133 4exu_A Mitogen-activated prote 100.0 7.8E-45 2.7E-49  296.3  21.1  229    1-236    66-330 (371)
134 3eb0_A Putative uncharacterize 100.0 1.2E-44   4E-49  296.4  22.0  224    1-235    31-327 (383)
135 2x7f_A TRAF2 and NCK-interacti 100.0 7.8E-45 2.7E-49  291.3  20.2  230    1-236    48-293 (326)
136 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-44 6.3E-49  292.2  22.6  231    1-237    35-313 (353)
137 3dtc_A Mitogen-activated prote 100.0 6.9E-45 2.4E-49  284.4  19.4  226    2-230    30-267 (271)
138 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-44 4.1E-49  282.6  20.6  221    2-230    32-258 (268)
139 1luf_A Muscle-specific tyrosin 100.0 7.5E-45 2.6E-49  293.4  19.6  222    2-229    77-328 (343)
140 2ivs_A Proto-oncogene tyrosine 100.0 8.3E-45 2.8E-49  289.6  19.6  223    2-230    53-305 (314)
141 3ork_A Serine/threonine protei 100.0 1.5E-45 5.1E-50  293.8  15.2  231    1-235    36-279 (311)
142 2ycf_A Serine/threonine-protei 100.0 8.5E-45 2.9E-49  290.7  19.5  234    1-235    34-280 (322)
143 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-45 4.4E-50  301.0  14.9  232    1-236    86-359 (371)
144 3kvw_A DYRK2, dual specificity 100.0 1.8E-44 6.2E-49  299.1  21.9  230    1-240   121-419 (429)
145 2wei_A Calmodulin-domain prote 100.0 1.4E-44 4.8E-49  285.0  20.1  230    1-236    46-283 (287)
146 3rgf_A Cyclin-dependent kinase 100.0 1.2E-44   4E-49  298.5  20.5  227    1-236    47-340 (405)
147 1blx_A Cyclin-dependent kinase 100.0 7.9E-44 2.7E-48  285.5  24.6  230    1-236    36-303 (326)
148 3cbl_A C-FES, proto-oncogene t 100.0   7E-45 2.4E-49  297.1  18.7  223    1-229   138-367 (377)
149 3coi_A Mitogen-activated prote 100.0 2.7E-44 9.3E-49  291.3  21.8  229    1-236    48-312 (353)
150 3pg1_A Mitogen-activated prote 100.0 2.6E-44   9E-49  292.3  21.3  235    1-237    45-324 (362)
151 2i6l_A Mitogen-activated prote 100.0 1.9E-44 6.5E-49  288.1  19.9  229    1-236    35-312 (320)
152 1zy4_A Serine/threonine-protei 100.0 4.8E-44 1.6E-48  283.6  21.9  227    1-237    30-291 (303)
153 3gen_A Tyrosine-protein kinase 100.0 2.9E-44   1E-48  282.6  20.4  221    2-230    48-274 (283)
154 3nsz_A CK II alpha, casein kin 100.0 2.3E-44   8E-49  289.0  20.2  227    1-238    60-328 (330)
155 3an0_A Dual specificity mitoge 100.0 2.1E-44 7.1E-49  290.5  19.9  231    1-236    75-317 (340)
156 1mp8_A Focal adhesion kinase 1 100.0 5.1E-44 1.7E-48  281.0  20.2  222    2-230    43-270 (281)
157 1k9a_A Carboxyl-terminal SRC k 100.0 8.4E-44 2.9E-48  296.8  22.6  219    1-229   215-438 (450)
158 1u59_A Tyrosine-protein kinase 100.0 4.2E-44 1.4E-48  282.3  19.6  223    2-231    37-267 (287)
159 2qol_A Ephrin receptor; recept 100.0   4E-44 1.4E-48  292.1  20.0  222    2-229    73-302 (373)
160 3t9t_A Tyrosine-protein kinase 100.0 5.7E-44 1.9E-48  278.6  19.6  222    1-230    31-258 (267)
161 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-44   9E-49  286.4  18.0  219    1-229    34-275 (310)
162 4euu_A Serine/threonine-protei 100.0 2.1E-44   7E-49  288.2  17.4  228    1-232    33-305 (319)
163 4e7w_A Glycogen synthase kinas 100.0 8.5E-44 2.9E-48  292.2  21.4  225    2-236    64-328 (394)
164 2pvf_A Fibroblast growth facto 100.0 7.4E-44 2.5E-48  286.7  20.6  223    2-230    67-312 (334)
165 3vhe_A Vascular endothelial gr 100.0 3.2E-44 1.1E-48  291.5  18.5  223    2-230    52-349 (359)
166 1p4o_A Insulin-like growth fac 100.0 6.4E-44 2.2E-48  285.6  19.9  223    2-230    55-293 (322)
167 1z57_A Dual specificity protei 100.0 9.8E-44 3.4E-48  286.1  21.1  226    1-236    39-335 (339)
168 1j1b_A Glycogen synthase kinas 100.0 1.1E-43 3.8E-48  293.7  21.4  225    1-236    78-343 (420)
169 1xbb_A Tyrosine-protein kinase 100.0 1.1E-43 3.7E-48  280.5  20.3  222    2-229    44-272 (291)
170 3kfa_A Tyrosine-protein kinase 100.0 1.1E-43 3.9E-48  279.8  20.0  220    2-229    38-264 (288)
171 2yfx_A Tyrosine-protein kinase 100.0 5.2E-44 1.8E-48  286.8  18.3  227    2-234    60-302 (327)
172 3a99_A Proto-oncogene serine/t 100.0 1.7E-44 5.8E-49  288.8  15.3  230    1-238    67-302 (320)
173 3ugc_A Tyrosine-protein kinase 100.0 1.3E-43 4.5E-48  280.5  20.1  222    1-229    38-284 (295)
174 3cek_A Dual specificity protei 100.0 3.6E-43 1.2E-47  280.3  22.4  233    1-238    51-301 (313)
175 1mqb_A Ephrin type-A receptor  100.0 4.2E-43 1.5E-47  282.1  22.8  221    3-229    74-302 (333)
176 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-43 5.2E-48  283.0  20.0  223    1-229    59-303 (318)
177 3fhr_A MAP kinase-activated pr 100.0 4.5E-44 1.5E-48  288.1  16.9  226    1-237    53-295 (336)
178 1fvr_A Tyrosine-protein kinase 100.0 1.6E-43 5.4E-48  284.0  20.0  220    5-230    55-294 (327)
179 2iwi_A Serine/threonine-protei 100.0 5.5E-44 1.9E-48  284.8  17.1  230    1-238    55-292 (312)
180 4f0f_A Serine/threonine-protei 100.0 6.4E-43 2.2E-47  275.5  23.1  226    1-229    43-282 (287)
181 3poz_A Epidermal growth factor 100.0 9.9E-44 3.4E-48  285.1  18.7  219    5-230    47-272 (327)
182 3cc6_A Protein tyrosine kinase 100.0   2E-43 6.8E-48  277.6  19.9  221    3-230    41-267 (281)
183 2dyl_A Dual specificity mitoge 100.0 5.1E-43 1.7E-47  279.8  22.4  231    1-235    49-289 (318)
184 1rjb_A FL cytokine receptor; k 100.0 1.1E-43 3.8E-48  286.7  18.3  224    2-231    75-329 (344)
185 3e3p_A Protein kinase, putativ 100.0 3.2E-43 1.1E-47  285.7  21.1  229    1-237    47-322 (360)
186 3aln_A Dual specificity mitoge 100.0 1.8E-43   6E-48  283.7  19.0  230    1-235    46-291 (327)
187 3lb7_A RAF proto-oncogene seri 100.0 1.2E-42 4.1E-47  276.5  23.4  228    2-233    58-297 (307)
188 3lzb_A Epidermal growth factor 100.0 2.3E-43   8E-48  282.9  19.4  218    5-229    47-271 (327)
189 1qcf_A Haematopoetic cell kina 100.0   2E-43 6.8E-48  295.0  19.6  219    2-229   212-437 (454)
190 3kmu_A ILK, integrin-linked ki 100.0 4.7E-43 1.6E-47  273.8  20.5  223    1-229    32-263 (271)
191 1t46_A HOMO sapiens V-KIT hard 100.0 3.6E-43 1.2E-47  280.0  20.1  223    2-230    53-301 (313)
192 3brb_A Proto-oncogene tyrosine 100.0 4.2E-43 1.4E-47  279.8  20.3  224    2-230    62-302 (313)
193 2rio_A Serine/threonine-protei 100.0 3.5E-43 1.2E-47  291.8  20.6  226    1-235    38-301 (434)
194 1wak_A Serine/threonine-protei 100.0 8.2E-44 2.8E-48  292.5  16.6  225    1-235    61-397 (397)
195 1opk_A P150, C-ABL, proto-onco 100.0 2.9E-43 9.8E-48  296.7  20.0  220    2-229   245-471 (495)
196 1byg_A CSK, protein (C-termina 100.0 4.2E-43 1.4E-47  275.3  19.6  219    1-229    43-266 (278)
197 3kex_A Receptor tyrosine-prote 100.0 6.5E-44 2.2E-48  286.0  14.8  219    5-230    45-270 (325)
198 3pls_A Macrophage-stimulating  100.0 1.6E-42 5.5E-47  274.5  22.3  220    4-229    51-280 (298)
199 1qpc_A LCK kinase; alpha beta  100.0 8.4E-43 2.9E-47  273.7  20.2  219    2-229    37-262 (279)
200 4e5w_A Tyrosine-protein kinase 100.0 4.5E-43 1.5E-47  278.2  18.7  223    1-229    49-295 (302)
201 4fl3_A Tyrosine-protein kinase 100.0 6.4E-43 2.2E-47  301.9  21.1  222    2-229   396-624 (635)
202 2vx3_A Dual specificity tyrosi 100.0 6.9E-43 2.4E-47  285.9  20.1  226    1-236    78-379 (382)
203 3p23_A Serine/threonine-protei 100.0 7.1E-43 2.4E-47  289.4  20.5  226    1-235    47-289 (432)
204 3f66_A Hepatocyte growth facto 100.0 1.4E-42 4.9E-47  274.9  21.3  220    4-229    55-284 (298)
205 2h34_A Serine/threonine-protei 100.0 1.9E-42 6.6E-47  275.6  22.0  225    1-229    58-289 (309)
206 2eu9_A Dual specificity protei 100.0   1E-42 3.5E-47  281.9  20.7  224    3-236    46-340 (355)
207 2ozo_A Tyrosine-protein kinase 100.0 9.8E-43 3.4E-47  299.9  21.2  221    2-229   363-591 (613)
208 2xir_A Vascular endothelial gr 100.0 4.5E-43 1.5E-47  279.9  17.7  223    2-230    57-304 (316)
209 2wqm_A Serine/threonine-protei 100.0 5.2E-42 1.8E-46  273.1  23.8  225    1-229    56-290 (310)
210 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 7.7E-43 2.6E-47  291.2  19.4  226    2-236   208-442 (452)
211 4fvq_A Tyrosine-protein kinase 100.0 5.5E-43 1.9E-47  276.1  16.9  218    3-230    41-269 (289)
212 2qkw_B Protein kinase; three-h 100.0 1.3E-43 4.4E-48  283.8  13.4  224    1-231    62-310 (321)
213 1q8y_A SR protein kinase; tran 100.0 4.8E-43 1.7E-47  285.8  17.0  230    1-240    43-344 (373)
214 3lxl_A Tyrosine-protein kinase 100.0 1.5E-42   5E-47  278.4  19.4  222    1-229    51-296 (327)
215 3c1x_A Hepatocyte growth facto 100.0 7.3E-43 2.5E-47  284.4  17.4  220    4-229   119-348 (373)
216 1csn_A Casein kinase-1; phosph 100.0   5E-42 1.7E-46  271.6  21.8  219    1-229    34-276 (298)
217 3soc_A Activin receptor type-2 100.0 1.4E-42 4.6E-47  278.0  18.1  222    2-229    47-311 (322)
218 3og7_A AKAP9-BRAF fusion prote 100.0 6.4E-42 2.2E-46  270.1  21.3  224    2-229    46-281 (289)
219 2izr_A Casein kinase I isoform 100.0 3.1E-42 1.1E-46  276.8  19.6  218    1-229    33-274 (330)
220 2eva_A TAK1 kinase - TAB1 chim 100.0 8.3E-42 2.8E-46  271.7  21.4  216    2-229    31-256 (307)
221 2nru_A Interleukin-1 receptor- 100.0 3.5E-42 1.2E-46  273.7  18.6  226    1-230    53-300 (307)
222 3uim_A Brassinosteroid insensi 100.0 4.8E-43 1.6E-47  281.0  13.6  226    1-232    53-307 (326)
223 2buj_A Serine/threonine-protei 100.0 3.4E-42 1.2E-46  275.0  18.3  225    1-230    53-300 (317)
224 2w1i_A JAK2; chromosomal rearr 100.0 6.9E-42 2.4E-46  274.3  19.4  222    1-229    69-315 (326)
225 2i1m_A Macrophage colony-stimu 100.0 4.3E-42 1.5E-46  276.2  18.3  221    3-229    77-319 (333)
226 2h8h_A Proto-oncogene tyrosine 100.0 3.9E-42 1.3E-46  292.3  18.6  225    2-235   291-524 (535)
227 2a19_B Interferon-induced, dou 100.0 5.4E-42 1.8E-46  269.6  18.1  219    1-235    35-273 (284)
228 3qa8_A MGC80376 protein; kinas 100.0 3.4E-42 1.2E-46  295.0  17.0  229    1-235    38-303 (676)
229 1u46_A ACK-1, activated CDC42  100.0 1.3E-41 4.5E-46  268.4  18.7  221    4-229    48-277 (291)
230 3m2w_A MAP kinase-activated pr 100.0 1.7E-41 5.9E-46  268.9  19.0  205    1-237    42-264 (299)
231 2v62_A Serine/threonine-protei 100.0 8.4E-42 2.9E-46  275.8  16.6  225    2-229    65-321 (345)
232 2j0j_A Focal adhesion kinase 1 100.0 3.7E-41 1.3E-45  291.9  21.7  221    2-229   418-644 (656)
233 3uzp_A CKI-delta, CKID, casein 100.0 6.2E-41 2.1E-45  265.1  21.1  219    1-229    33-273 (296)
234 3q4u_A Activin receptor type-1 100.0 2.2E-41 7.5E-46  268.3  17.2  221    1-229    30-295 (301)
235 3op5_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46  276.8  16.0  225    2-229    65-322 (364)
236 4eut_A Serine/threonine-protei 100.0 9.5E-42 3.2E-46  280.3  15.4  225    1-229    33-302 (396)
237 4hgt_A Casein kinase I isoform 100.0 1.1E-40 3.7E-45  263.7  20.8  219    1-229    33-273 (296)
238 2jii_A Serine/threonine-protei 100.0 3.2E-41 1.1E-45  273.2  17.6  215    2-229    75-329 (352)
239 3mdy_A Bone morphogenetic prot 100.0 1.3E-40 4.3E-45  268.0  20.3  221    2-230    60-325 (337)
240 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.4E-41 4.8E-46  271.6  14.6  223    3-229    56-295 (319)
241 3ll6_A Cyclin G-associated kin 100.0 1.1E-40 3.9E-45  268.1  18.9  222    1-231    52-303 (337)
242 1b6c_B TGF-B superfamily recep 100.0 1.5E-40 5.2E-45  268.0  18.8  222    1-230    64-330 (342)
243 3g2f_A Bone morphogenetic prot 100.0 8.4E-41 2.9E-45  269.0  15.8  234    1-240    35-328 (336)
244 3sv0_A Casein kinase I-like; t 100.0 1.5E-39   5E-44  272.3  21.3  219    1-229    31-271 (483)
245 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.5E-40 1.2E-44  268.3  16.5  214    1-229    94-331 (365)
246 3dzo_A Rhoptry kinase domain;  100.0   1E-40 3.5E-45  275.4  13.4  226    1-236   102-370 (413)
247 3gxj_A TGF-beta receptor type- 100.0   1E-41 3.4E-46  270.5   3.5  221    1-229    25-290 (303)
248 2vuw_A Serine/threonine-protei 100.0 8.7E-41   3E-45  269.0   8.2  223    1-234    42-336 (336)
249 3uqc_A Probable conserved tran 100.0 2.7E-38 9.3E-43  248.8  18.1  198    1-229    55-258 (286)
250 2pzi_A Probable serine/threoni 100.0 1.4E-39 4.9E-44  283.9  11.2  216    1-234   105-325 (681)
251 4azs_A Methyltransferase WBDD; 100.0 5.1E-35 1.8E-39  249.4   6.2  167    2-174   259-434 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 9.9E-27 3.4E-31  197.4   5.1  168    2-178   359-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 2.5E-20 8.6E-25  145.8   9.9  126    1-148   113-251 (282)
254 1zth_A RIO1 serine protein kin  99.7 1.5E-17 5.1E-22  128.5   9.8  119    1-127    71-218 (258)
255 4gyi_A RIO2 kinase; protein ki  99.6 3.6E-15 1.2E-19  120.2   8.1  121    1-128   118-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3 1.1E-11 3.6E-16   95.8  11.2  115    2-125    37-211 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.2 5.5E-11 1.9E-15   91.5   8.8  110    1-125    43-212 (264)
258 3dxp_A Putative acyl-COA dehyd  99.1 4.9E-10 1.7E-14   90.5   8.7  121    2-127    61-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  99.0   7E-10 2.4E-14   87.5   7.2  168    3-178    41-287 (304)
260 3r70_A Aminoglycoside phosphot  98.7 9.3E-08 3.2E-12   75.8  11.3  114    2-127    57-237 (320)
261 4gkh_A Aminoglycoside 3'-phosp  98.7 3.3E-07 1.1E-11   70.7  13.7  113    2-125    50-221 (272)
262 3tdw_A Gentamicin resistance p  98.6 7.7E-07 2.6E-11   70.1  13.2  118    2-127    39-224 (306)
263 2yle_A Protein spire homolog 1  98.5 2.7E-06 9.1E-11   62.5  12.7  134   64-229    33-194 (229)
264 3ovc_A Hygromycin-B 4-O-kinase  98.4 1.2E-06   4E-11   70.7   8.9   56    1-66     63-121 (362)
265 3ats_A Putative uncharacterize  98.2 3.8E-06 1.3E-10   67.5   7.1   63    2-66     52-120 (357)
266 2q83_A YTAA protein; 2635576,   97.9 0.00024 8.2E-09   56.4  12.3   29   97-125   222-250 (346)
267 3csv_A Aminoglycoside phosphot  97.8 9.5E-05 3.3E-09   58.7   9.3   31   97-127   183-217 (333)
268 3d1u_A Putative fructosamine-3  97.7 9.8E-05 3.3E-09   57.5   7.9   57    1-66     38-97  (288)
269 2olc_A MTR kinase, methylthior  97.7 0.00012 4.1E-09   59.6   7.8   30   96-126   226-255 (397)
270 3jr1_A Putative fructosamine-3  97.6 0.00047 1.6E-08   54.2   9.8   58    1-66     58-118 (312)
271 3dxq_A Choline/ethanolamine ki  97.4 0.00082 2.8E-08   52.5   9.0   28   98-126   174-201 (301)
272 2pyw_A Uncharacterized protein  97.4  0.0015   5E-08   53.6  10.2   32   95-127   230-261 (420)
273 3feg_A Choline/ethanolamine ki  97.3 0.00056 1.9E-08   55.3   7.3  115    2-126    82-253 (379)
274 1zyl_A Hypothetical protein YI  97.2  0.0029 9.9E-08   49.9  10.5   28   97-126   195-222 (328)
275 2ppq_A HSK, HK, homoserine kin  97.1 0.00096 3.3E-08   52.5   6.2   30   97-126   187-216 (322)
276 1nw1_A Choline kinase (49.2 KD  96.9  0.0037 1.3E-07   51.4   8.7   53    2-65    105-158 (429)
277 3f7w_A Putative fructosamine-3  96.9   0.004 1.4E-07   48.2   8.3   56    1-65     38-96  (288)
278 3f2s_A CK, chetk-alpha, cholin  96.5  0.0073 2.5E-07   49.1   7.0   29   98-126   245-279 (401)
279 4ann_A ESSB; membrane protein,  95.4   0.095 3.3E-06   38.4   8.2  115   37-179    43-158 (215)
280 4ano_A ESSB; membrane protein,  94.9    0.44 1.5E-05   35.1  10.4  114   37-179    48-163 (219)
281 3i1a_A Spectinomycin phosphotr  93.8   0.065 2.2E-06   42.4   4.5   30   97-126   206-235 (339)
282 3c5i_A Choline kinase; choline  92.3    0.19 6.4E-06   40.2   5.1   28   98-126   213-240 (369)
283 2qg7_A Ethanolamine kinase PV0  91.8    0.23 7.8E-06   41.1   5.2   55    2-66    133-188 (458)
284 3g15_A CK, chetk-alpha, cholin  87.3    0.35 1.2E-05   39.2   2.9   28   99-126   246-279 (401)
285 3mes_A Choline kinase; malaria  83.8    0.55 1.9E-05   38.4   2.5   28   98-126   263-290 (424)
286 3i1a_A Spectinomycin phosphotr  76.5      22 0.00077   27.7   9.5   76    4-98     48-132 (339)
287 2x6h_A GH13170P, VPS34, phosph  69.2      59   0.002   28.5  14.0   26  102-127   551-576 (696)
288 3mes_A Choline kinase; malaria  68.9      10 0.00034   31.0   5.9   81    2-99    102-183 (424)
289 3oja_A Leucine-rich immune mol  66.8    0.45 1.5E-05   39.6  -2.5   29   23-51    323-351 (487)
290 2qg7_A Ethanolamine kinase PV0  64.7      20 0.00069   29.5   7.0   35   63-97    176-212 (458)
291 3c5i_A Choline kinase; choline  58.4      12 0.00041   29.5   4.5   78    3-97     67-145 (369)
292 3ls8_A Phosphatidylinositol 3-  54.2 1.1E+02  0.0036   26.4  14.5   26  102-127   477-502 (614)
293 1e7u_A Phosphatidylinositol 3-  42.9      40  0.0014   30.7   5.6   26  102-127   804-829 (961)
294 2y3a_A Phosphatidylinositol-4,  41.8      92  0.0031   28.9   7.8   25  102-126   940-964 (1092)
295 3bpy_A FORK head domain, forkh  34.0      25 0.00086   21.3   2.1   31  206-236    10-45  (85)
296 1cja_A Protein (actin-fragmin   32.9      57  0.0019   25.7   4.4   74   52-127   155-237 (342)
297 1vtn_C HNF-3/FORK head DNA-rec  29.2      42  0.0014   21.2   2.6   30  206-235     8-42  (102)
298 3l2c_A Forkhead box protein O4  28.8      33  0.0011   22.0   2.1   32  205-236    28-64  (110)
299 3eps_A Isocitrate dehydrogenas  28.6 2.7E+02  0.0092   23.6  12.9   59   65-125   421-479 (578)
300 3coa_C Forkhead box protein O1  28.5      42  0.0014   21.8   2.6   32  205-236    15-51  (117)
301 1kq8_A HFH-1, hepatocyte nucle  27.6      43  0.0015   21.0   2.4   31  206-236     7-42  (100)
302 2fq3_A Transcription regulator  26.2      41  0.0014   21.3   2.1   26  204-229    50-75  (104)
303 2wxf_A Phosphatidylinositol-4,  26.1      34  0.0012   31.1   2.4   25  102-126   788-812 (940)
304 3hhm_A Phosphatidylinositol-4,  25.8 4.1E+02   0.014   24.8  12.6   26  102-127   937-962 (1091)
305 2c6y_A Forkhead box protein K2  23.1      50  0.0017   21.2   2.2   31  205-235    20-55  (111)
306 2dce_A KIAA1915 protein; swirm  21.1      49  0.0017   21.2   1.8   26  204-229    51-76  (111)
307 2eqg_A Tumor necrosis factor,   20.4      56  0.0019   16.8   1.6   15  229-243    18-32  (49)
308 3arc_T Photosystem II reaction  20.1      88   0.003   14.9   2.6   16  162-177    12-27  (32)

No 1  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=8e-61  Score=382.59  Aligned_cols=233  Identities=29%  Similarity=0.583  Sum_probs=210.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc---CCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY---HLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~   77 (247)
                      +|+.||||++.....   .....+.+.+|+.++++|+||||+++++++.+++.+|+||||++||+|.+++...   .+++
T Consensus        48 ~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e  124 (350)
T 4b9d_A           48 DGRQYVIKEINISRM---SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE  124 (350)
T ss_dssp             TCCEEEEEEEECTTS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCH
T ss_pred             CCCEEEEEEEehHHC---CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCH
Confidence            589999999987543   3445778999999999999999999999999999999999999999999999654   3789


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCCCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ..++.++.||+.||.|||++||+||||||+||+++.+|.+||+|||++.......  .....||+.|+|||.+.+..  +
T Consensus       125 ~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~--y  202 (350)
T 4b9d_A          125 DQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP--Y  202 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC--C
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCC--C
Confidence            9999999999999999999999999999999999999999999999998665432  23456999999999997654  8


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                      +.++|||||||++|+|++|+.||...+.......+..+..+..+..+|+++++||.+||+.||.+|||++|+++||||++
T Consensus       203 ~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          203 NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            99999999999999999999999998888888888888888888899999999999999999999999999999999987


Q ss_pred             CCC
Q 041080          236 PLQ  238 (247)
Q Consensus       236 ~~~  238 (247)
                      .++
T Consensus       283 ~~~  285 (350)
T 4b9d_A          283 RIE  285 (350)
T ss_dssp             TGG
T ss_pred             CCC
Confidence            543


No 2  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=4.2e-60  Score=377.89  Aligned_cols=229  Identities=31%  Similarity=0.595  Sum_probs=203.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      +|+.||||++......     ..+.+.+|+.+|++++||||+++++++.+++.+|+||||++||+|.+++++.++++..+
T Consensus        98 tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~  172 (346)
T 4fih_A           98 SGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI  172 (346)
T ss_dssp             TCCEEEEEEEEGGGCS-----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHSCCCHHHH
T ss_pred             CCCEEEEEEEecCchh-----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHH
Confidence            5899999999765322     23457799999999999999999999999999999999999999999999989999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCCcc
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ..++.||+.||.|||++||+||||||+||+++.+|.+||+|||++......  ......||+.|+|||.+.+..  ++.+
T Consensus       173 ~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~  250 (346)
T 4fih_A          173 AAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP--YGPE  250 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCC--BCTH
T ss_pred             HHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCC--CCcH
Confidence            999999999999999999999999999999999999999999998765433  345677999999999996554  8999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC--CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV--PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      +|||||||++|+|++|..||...+..+....+.....+..  +..+|+++++||.+||+.||.+|||++|+++||||++.
T Consensus       251 ~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          251 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999999998887777777665543333  35789999999999999999999999999999999874


No 3  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=5.6e-60  Score=371.99  Aligned_cols=231  Identities=26%  Similarity=0.452  Sum_probs=204.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.+....  .....+.+.+|+.++++++||||+++++++++++.+|+||||++||+|.+++++. .+++..
T Consensus        56 ~~~~~AiK~i~k~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~  133 (311)
T 4aw0_A           56 TSREYAIKILEKRHII--KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC  133 (311)
T ss_dssp             TCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHH
T ss_pred             CCCEEEEEEEEHHHCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHH
Confidence            5889999999764321  2234567899999999999999999999999999999999999999999999765 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc----ccccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN----DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      +..++.||+.||.|||++||+||||||+||+++.+|.+||+|||++......    ......||+.|+|||.+.+..  +
T Consensus       134 ~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y  211 (311)
T 4aw0_A          134 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS--A  211 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSC--B
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCC--C
Confidence            9999999999999999999999999999999999999999999999765322    234567999999999997655  8


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhh------hhc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTE------LME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~------il~  229 (247)
                      +.++|+||+||++|+|++|..||...+.......+..... .++..+++++++||.+||+.||.+|||++|      |++
T Consensus       212 ~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~  290 (311)
T 4aw0_A          212 CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA  290 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHT
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHC
Confidence            9999999999999999999999998888888877777654 567889999999999999999999999998      589


Q ss_pred             CccCCCC
Q 041080          230 HPFVKRP  236 (247)
Q Consensus       230 ~p~~~~~  236 (247)
                      ||||+.+
T Consensus       291 Hp~F~~i  297 (311)
T 4aw0_A          291 HPFFESV  297 (311)
T ss_dssp             SGGGTTC
T ss_pred             CCCcCCC
Confidence            9999874


No 4  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.3e-59  Score=363.74  Aligned_cols=233  Identities=29%  Similarity=0.458  Sum_probs=192.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.+....  .....+.+.+|+.++++++||||+++++++.+++.+++||||+ +|+|.+.+.+. .+++..
T Consensus        37 ~~~~vAiK~i~~~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~  113 (275)
T 3hyh_A           37 TGQKVALKIINKKVLA--KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQE  113 (275)
T ss_dssp             TCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHH
T ss_pred             CCCEEEEEEEeHHHcC--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHH
Confidence            5899999999765432  2334567899999999999999999999999999999999999 56888887654 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCCCcc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      +..++.|++.||+|||++||+||||||+||+++.++.++|+|||++....... .....||+.|+|||.+.+... ++.+
T Consensus       114 ~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y-~~~~  192 (275)
T 3hyh_A          114 ARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY-AGPE  192 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSSC-CCTH
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCC-CCCh
Confidence            99999999999999999999999999999999999999999999997654333 345679999999999976542 3679


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      +||||+||++|+|++|+.||...+.......+.... ..++..+|++++++|.+||+.||.+|||++|+++||||+..+.
T Consensus       193 ~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p  271 (275)
T 3hyh_A          193 VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV-YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP  271 (275)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCC
T ss_pred             hhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccCCC
Confidence            999999999999999999999887777777766654 4567889999999999999999999999999999999987653


No 5  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.2e-58  Score=362.61  Aligned_cols=229  Identities=29%  Similarity=0.523  Sum_probs=195.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec----CCcEEEEEeccccCcHHHHHHhc-CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD----ENRLYIFLELVTKGSLANLYQKY-HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~-~~   75 (247)
                      +|..||+|++.....   .....+.+.+|+.++++++|||||++++++.+    ++.+++||||++||+|.+++++. .+
T Consensus        50 ~~~~vAiK~i~~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l  126 (290)
T 3fpq_A           50 TTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVM  126 (290)
T ss_dssp             TCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSC
T ss_pred             CCeEEEEEEEchhhC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCC
Confidence            478999999976532   34456789999999999999999999999865    35689999999999999999765 59


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCcEEEcC-CCCeEEcccccccccCccccccCCCCCCccCCcccccCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERN--VVHRDIKCANILVDA-SGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~~~ni~~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  152 (247)
                      ++..+..++.|++.||+|||++|  |+||||||+||+++. +|.+||+|||++............||+.|+|||.+.+  
T Consensus       127 ~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~--  204 (290)
T 3fpq_A          127 KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE--  204 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT--
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC--
Confidence            99999999999999999999998  999999999999984 7899999999998666555667789999999999864  


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhH-HHHHhhcCCC-CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQ-ALFRIGKGEL-PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                       .++.++|||||||++|+|++|..||....... ....+..+.. +..+...+++++++|.+||..||.+|||++|+++|
T Consensus       205 -~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          205 -KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             38999999999999999999999997655443 3444444433 23456788999999999999999999999999999


Q ss_pred             ccCCC
Q 041080          231 PFVKR  235 (247)
Q Consensus       231 p~~~~  235 (247)
                      |||++
T Consensus       284 p~~~~  288 (290)
T 3fpq_A          284 AFFQE  288 (290)
T ss_dssp             GGGC-
T ss_pred             ccccC
Confidence            99985


No 6  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=1.2e-58  Score=378.07  Aligned_cols=229  Identities=31%  Similarity=0.589  Sum_probs=203.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      +|+.||||++......     ..+.+.+|+.+|++++||||+++++++.+++.+|+||||++||+|.++++..++++..+
T Consensus       175 tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~  249 (423)
T 4fie_A          175 SGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI  249 (423)
T ss_dssp             TCCEEEEEEEESTTCS-----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHSCCCHHHH
T ss_pred             CCCEEEEEEEeccchh-----HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhccCCCHHHH
Confidence            5899999999765322     23457899999999999999999999999999999999999999999999989999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCCcc
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......  ......||+.|+|||++.+..  |+.+
T Consensus       250 ~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~--y~~~  327 (423)
T 4fie_A          250 AAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP--YGPE  327 (423)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCC--BCTH
T ss_pred             HHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCC--CCcH
Confidence            999999999999999999999999999999999999999999998765433  344567999999999996554  8999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC--CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS--VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      +|||||||++|+|++|..||...+.......+.....+.  .+..+|+++++||.+||..||.+|||++|+|+||||++.
T Consensus       328 ~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence            999999999999999999999888777777766554333  345789999999999999999999999999999999874


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=6.3e-59  Score=365.88  Aligned_cols=229  Identities=29%  Similarity=0.436  Sum_probs=195.5

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQV   80 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~   80 (247)
                      |+.||||++.+......   ....+.+|+.++++++||||+++++++.+++.+++||||++||+|.+++++. .+++..+
T Consensus        52 ~~~vAiK~i~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~  128 (304)
T 3ubd_A           52 RQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV  128 (304)
T ss_dssp             TCEEEEEEEESEEEEEE---ECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHH
T ss_pred             CEEEEEEEEehHHcChH---HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHH
Confidence            67899999976543222   1235778999999999999999999999999999999999999999999765 5999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc--cccccCCCCCCccCCcccccCCCCCCcc
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM--NDLKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ..++.|++.||+|||++||+||||||+||+++.+|.+||+|||++.....  .......||+.|+|||.+.+..  ++.+
T Consensus       129 ~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~--y~~~  206 (304)
T 3ubd_A          129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG--HTQS  206 (304)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSC--CCTH
T ss_pred             HHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCC--CCCC
Confidence            99999999999999999999999999999999999999999999975432  2344567999999999997655  8899


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh-----hhhhcCccC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV-----TELMEHPFV  233 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~p~~  233 (247)
                      +||||+||++|+|++|..||...+..+....+..... .++..+|+++++||.+||+.||.+|||+     +|+++||||
T Consensus       207 ~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f  285 (304)
T 3ubd_A          207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL-GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF  285 (304)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred             CcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC-CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccc
Confidence            9999999999999999999999888888877776654 5678899999999999999999999984     799999999


Q ss_pred             CCC
Q 041080          234 KRP  236 (247)
Q Consensus       234 ~~~  236 (247)
                      +.+
T Consensus       286 ~~i  288 (304)
T 3ubd_A          286 STI  288 (304)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            864


No 8  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=7.7e-57  Score=358.07  Aligned_cols=225  Identities=30%  Similarity=0.452  Sum_probs=194.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++..+..          ..+|+.++++++|||||++++++.+++.+++||||++||+|.+++++. .+++..
T Consensus        82 ~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~  151 (336)
T 4g3f_A           82 TGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR  151 (336)
T ss_dssp             TCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHH
T ss_pred             CCCEEEEEEECHHHh----------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHH
Confidence            488999999975432          137999999999999999999999999999999999999999999765 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC-CeEEcccccccccCccc-------cccCCCCCCccCCcccccC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG-SVKLADFGLAKATTMND-------LKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~-~~~l~df~~~~~~~~~~-------~~~~~~~~~~~aPE~~~~~  151 (247)
                      +..++.|++.||+|||++||+||||||+||+++.+| .+||+|||++.......       .....||+.|+|||.+.+.
T Consensus       152 ~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  231 (336)
T 4g3f_A          152 ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK  231 (336)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCC
Confidence            999999999999999999999999999999999987 59999999997554322       1234699999999999765


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC--CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhh--
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL--PSVPSSLSRDARDFILKCLQVNPNDRPTVTEL--  227 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i--  227 (247)
                      .  ++.++|||||||++|+|++|..||...........+.....  ..++..+|++++++|.+||+.||.+|||+.|+  
T Consensus       232 ~--y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~  309 (336)
T 4g3f_A          232 P--CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRR  309 (336)
T ss_dssp             C--CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             C--CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            4  89999999999999999999999988777777666665543  24677899999999999999999999999997  


Q ss_pred             -----------hcCccCCCCC
Q 041080          228 -----------MEHPFVKRPL  237 (247)
Q Consensus       228 -----------l~~p~~~~~~  237 (247)
                                 ++|||+++..
T Consensus       310 ~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          310 KVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             HHHHHHHHTTSSCSCSSSSCC
T ss_pred             HHHHHHhhhhhccCCCcCCCC
Confidence                       6799998763


No 9  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5.8e-56  Score=349.61  Aligned_cols=221  Identities=26%  Similarity=0.494  Sum_probs=197.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-------
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-------   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------   73 (247)
                      +|..||||++..     ......+.|.+|+.++++++|||||++++++.+++..++||||+++|+|.+++.+.       
T Consensus        42 ~~~~vAvK~l~~-----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~  116 (299)
T 4asz_A           42 DKILVAVKTLKD-----ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLM  116 (299)
T ss_dssp             -CEEEEEEEECS-----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC
T ss_pred             CCEEEEEEEeCC-----CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccc
Confidence            367899999863     23455678999999999999999999999999999999999999999999999753       


Q ss_pred             -------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc----ccCCCCCCc
Q 041080           74 -------HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL----KSCKGTPFW  142 (247)
Q Consensus        74 -------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~  142 (247)
                             .+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||+++.......    ....|++.|
T Consensus       117 ~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~y  196 (299)
T 4asz_A          117 AEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW  196 (299)
T ss_dssp             ----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGG
T ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhh
Confidence                   489999999999999999999999999999999999999999999999999975433321    223478999


Q ss_pred             cCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCC
Q 041080          143 MAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDR  221 (247)
Q Consensus       143 ~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  221 (247)
                      +|||.+.+..  ++.++||||||+++|||+| |+.||...+..+....+..+..+..|..+|+++.+++.+||+.||.+|
T Consensus       197 mAPE~~~~~~--~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~R  274 (299)
T 4asz_A          197 MPPESIMYRK--FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMR  274 (299)
T ss_dssp             CCHHHHHHCC--CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             cCHHHHcCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHC
Confidence            9999997655  8999999999999999998 899999999888888888888888889999999999999999999999


Q ss_pred             CChhhhh
Q 041080          222 PTVTELM  228 (247)
Q Consensus       222 ps~~~il  228 (247)
                      ||+++++
T Consensus       275 Ps~~~i~  281 (299)
T 4asz_A          275 KNIKGIH  281 (299)
T ss_dssp             CCHHHHH
T ss_pred             cCHHHHH
Confidence            9999994


No 10 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=3.4e-55  Score=349.64  Aligned_cols=223  Identities=24%  Similarity=0.450  Sum_probs=192.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-------
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-------   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------   73 (247)
                      +|+.||||++..     ......+.|.+|+.++++++|||||++++++.+++..++||||+++|+|.+++.+.       
T Consensus        70 ~~~~vAvK~l~~-----~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~  144 (329)
T 4aoj_A           70 DKMLVAVKALKE-----ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL  144 (329)
T ss_dssp             -CEEEEEEEESC-----CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC----
T ss_pred             CCeEEEEEEECc-----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccc
Confidence            367899999963     23455678999999999999999999999999999999999999999999998653       


Q ss_pred             ---------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCC
Q 041080           74 ---------HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTP  140 (247)
Q Consensus        74 ---------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~  140 (247)
                               .+++..++.++.|++.||.|||+.+|+||||||+||+++.++.+||+|||+++......    .....|++
T Consensus       145 ~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~  224 (329)
T 4aoj_A          145 AGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI  224 (329)
T ss_dssp             -------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCG
T ss_pred             cccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccc
Confidence                     38899999999999999999999999999999999999999999999999997543332    22345889


Q ss_pred             CccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCC
Q 041080          141 FWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPN  219 (247)
Q Consensus       141 ~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  219 (247)
                      .|+|||.+.+..  ++.++||||||+++|||+| |+.||...+..+....+..+..+..|..+|+++.+++.+||+.||.
T Consensus       225 ~ymAPE~~~~~~--~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~  302 (329)
T 4aoj_A          225 RWMPPESILYRK--FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQ  302 (329)
T ss_dssp             GGCCHHHHTTCC--CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTT
T ss_pred             cccChhhhcCCC--CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChh
Confidence            999999996554  8999999999999999998 8999999888888888888777788889999999999999999999


Q ss_pred             CCCChhhhhcC
Q 041080          220 DRPTVTELMEH  230 (247)
Q Consensus       220 ~Rps~~~il~~  230 (247)
                      +|||++|++++
T Consensus       303 ~RPs~~ei~~~  313 (329)
T 4aoj_A          303 QRHSIKDVHAR  313 (329)
T ss_dssp             TSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999763


No 11 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=4.3e-55  Score=346.02  Aligned_cols=223  Identities=22%  Similarity=0.387  Sum_probs=197.3

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--------   73 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------   73 (247)
                      |+.||||++....    .....+.|.+|+.++++++||||++++|++.+++..++||||+++|+|.+++...        
T Consensus        56 ~~~VAvK~l~~~~----~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~  131 (308)
T 4gt4_A           56 TQAVAIKTLKDKA----EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS  131 (308)
T ss_dssp             CEEEEEEECCC-C----CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-
T ss_pred             CeEEEEEEECccc----ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccc
Confidence            5789999996432    2334567999999999999999999999999999999999999999999999542        


Q ss_pred             ---------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCC
Q 041080           74 ---------HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTP  140 (247)
Q Consensus        74 ---------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~  140 (247)
                               .+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++......    .....|++
T Consensus       132 ~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~  211 (308)
T 4gt4_A          132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI  211 (308)
T ss_dssp             ----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCG
T ss_pred             cccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCC
Confidence                     38899999999999999999999999999999999999999999999999987544332    23455889


Q ss_pred             CccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCC
Q 041080          141 FWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPN  219 (247)
Q Consensus       141 ~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  219 (247)
                      .|+|||.+.+..  ++.++||||||+++|||+| |..||...+..+....+..+..++.|..+|+++.+++.+||+.||.
T Consensus       212 ~ymAPE~l~~~~--~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~  289 (308)
T 4gt4_A          212 RWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPS  289 (308)
T ss_dssp             GGCCHHHHHHCC--CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             cccCHHHHhCCC--CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChh
Confidence            999999997655  8999999999999999998 8999999998888888888877788889999999999999999999


Q ss_pred             CCCChhhhhcC
Q 041080          220 DRPTVTELMEH  230 (247)
Q Consensus       220 ~Rps~~~il~~  230 (247)
                      +|||+++|+++
T Consensus       290 ~RPs~~ei~~~  300 (308)
T 4gt4_A          290 RRPRFKDIHSR  300 (308)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999874


No 12 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=5.4e-55  Score=344.53  Aligned_cols=227  Identities=26%  Similarity=0.429  Sum_probs=182.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC------------cEEEEEeccccCcHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN------------RLYIFLELVTKGSLAN   68 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------------~~~lv~e~~~~~~L~~   68 (247)
                      +|+.||||++....    .....+.+.+|+.++++++||||+++++++.+.+            .+++||||+++|+|.+
T Consensus        29 ~~~~vAiK~i~~~~----~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~  104 (299)
T 4g31_A           29 DDCNYAIKRIRLPN----RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKD  104 (299)
T ss_dssp             TCCEEEEEEEEECS----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHH
T ss_pred             CCCEEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHH
Confidence            58899999997643    3445677899999999999999999999886543            3799999999999999


Q ss_pred             HHHhcC----CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc------------
Q 041080           69 LYQKYH----LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND------------  132 (247)
Q Consensus        69 ~l~~~~----~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------------  132 (247)
                      +++...    .++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.......            
T Consensus       105 ~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~  184 (299)
T 4g31_A          105 WMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY  184 (299)
T ss_dssp             HHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-------------------
T ss_pred             HHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccc
Confidence            998754    4456688999999999999999999999999999999999999999999987544322            


Q ss_pred             --cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChh-hHHHHHhhcCCCCCCCCcCCHHHHHH
Q 041080          133 --LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEG-VQALFRIGKGELPSVPSSLSRDARDF  209 (247)
Q Consensus       133 --~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l  209 (247)
                        .....||+.|+|||.+.+..  ++.++|||||||++|+|++   ||..... ......+.....+......++...++
T Consensus       185 ~~~~~~~GT~~YmAPE~~~~~~--y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l  259 (299)
T 4g31_A          185 ARHTGQVGTKLYMSPEQIHGNS--YSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVM  259 (299)
T ss_dssp             -------CCCTTSCHHHHTTCC--CCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHH
T ss_pred             cccCCcccCccccCHHHHcCCC--CCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHH
Confidence              12346999999999997654  8999999999999999996   7754332 22333444444444445567788999


Q ss_pred             HHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          210 ILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       210 i~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      |.+||++||.+|||++|+++||||+..
T Consensus       260 i~~~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          260 VQDMLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             HHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999999864


No 13 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-53  Score=347.26  Aligned_cols=232  Identities=27%  Similarity=0.449  Sum_probs=192.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec------CCcEEEEEeccccCcHHHHHHhc-
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD------ENRLYIFLELVTKGSLANLYQKY-   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~-   73 (247)
                      +|+.||||++....   ......+.+.+|+.+|++++||||+++++++..      .+.+|+||||+.| +|.+++.+. 
T Consensus        78 t~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~~~~  153 (398)
T 4b99_A           78 TGQQVAIKKIPNAF---DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQ  153 (398)
T ss_dssp             TCCEEEEEEETTTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHTSSS
T ss_pred             CCCEEEEEEECccc---cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHHhcC
Confidence            58999999996543   334456678899999999999999999998653      4688999999975 788888654 


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc------ccccCCCCCCccCCcc
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN------DLKSCKGTPFWMAPEV  147 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~------~~~~~~~~~~~~aPE~  147 (247)
                      .+++..+..++.||+.||.|||++||+||||||+||+++.+|.++|+|||++......      ......||+.|+|||.
T Consensus       154 ~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv  233 (398)
T 4b99_A          154 PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL  233 (398)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHH
Confidence            5999999999999999999999999999999999999999999999999999754322      2345679999999999


Q ss_pred             cccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC----------------------CC--------
Q 041080          148 VNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL----------------------PS--------  197 (247)
Q Consensus       148 ~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~--------  197 (247)
                      +.+... ++.++||||+||++|+|++|+.||...+..+....+.....                      +.        
T Consensus       234 ~~~~~~-~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (398)
T 4b99_A          234 MLSLHE-YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWET  312 (398)
T ss_dssp             HTTCSC-CCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHH
T ss_pred             hcCCCC-CCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHH
Confidence            865432 68999999999999999999999988777666554432100                      00        


Q ss_pred             CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          198 VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       198 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      .....++++++||.+||..||.+|||++|+|+||||++..
T Consensus       313 ~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          313 VYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             hCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            1135689999999999999999999999999999999753


No 14 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.4e-53  Score=334.92  Aligned_cols=223  Identities=25%  Similarity=0.475  Sum_probs=183.9

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHHH
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQV   80 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~   80 (247)
                      ..||||+++...   ...+..+.|.+|+.++++++||||+++++++.. +.+++||||+++|+|.+++...  .+++..+
T Consensus        59 ~~vAvK~~~~~~---~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~  134 (307)
T 3omv_A           59 GDVAVKILKVVD---PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQL  134 (307)
T ss_dssp             SEEEEEECCCSS---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCCCCCHHHH
T ss_pred             CcEEEEEEEecC---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHH
Confidence            468999986543   345567789999999999999999999998754 5689999999999999999653  5999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc----ccccCCCCCCccCCcccccC-CCCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN----DLKSCKGTPFWMAPEVVNSK-NDGY  155 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~-~~~~  155 (247)
                      ..++.|++.||+|||++||+||||||+||+++.++.+||+|||++......    ......||+.|+|||.+.+. ...+
T Consensus       135 ~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y  214 (307)
T 3omv_A          135 IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF  214 (307)
T ss_dssp             HHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCC
T ss_pred             HHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCC
Confidence            999999999999999999999999999999999999999999999754322    23445699999999998654 3348


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhh-cCC----CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIG-KGE----LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++||||||+++|||++|+.||...+......... .+.    .+..+..+|+++.+++.+||+.+|.+|||+.++++
T Consensus       215 ~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             CcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            999999999999999999999998766554443332 221    23455688999999999999999999999998754


No 15 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=3.3e-53  Score=360.82  Aligned_cols=234  Identities=29%  Similarity=0.390  Sum_probs=197.8

Q ss_pred             CCceEEEEEEeecCCC-ccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQG-AQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++.+.... ..........+.++.+++.++||||++++++|++.+.+|+||||++||+|.+++.+. .+++.
T Consensus       213 tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~  292 (689)
T 3v5w_A          213 TGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA  292 (689)
T ss_dssp             TCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHH
T ss_pred             CCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHH
Confidence            5899999999865432 222233333445677888889999999999999999999999999999999999765 59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcc
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      .+..++.||+.||.|||++||+||||||+||+++.+|.+||+|||++............||+.|+|||++.... .++.+
T Consensus       293 ~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~-~y~~~  371 (689)
T 3v5w_A          293 DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGV-AYDSS  371 (689)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTC-CCCTH
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCC-CCCcH
Confidence            99999999999999999999999999999999999999999999999877766677788999999999985322 37999


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhh---HHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCC-----hhhhhcC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGV---QALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPT-----VTELMEH  230 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~  230 (247)
                      +|+|||||++|+|++|..||......   .....+... ...++..+|+++++||.+||+.||.+|++     ++||++|
T Consensus       372 vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~-~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM-AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC-CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence            99999999999999999999764332   223333333 34677889999999999999999999998     7999999


Q ss_pred             ccCCCC
Q 041080          231 PFVKRP  236 (247)
Q Consensus       231 p~~~~~  236 (247)
                      |||+.+
T Consensus       451 pfF~~i  456 (689)
T 3v5w_A          451 PFFRSL  456 (689)
T ss_dssp             GGGTTC
T ss_pred             ccccCC
Confidence            999864


No 16 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=3.4e-52  Score=336.71  Aligned_cols=225  Identities=27%  Similarity=0.377  Sum_probs=181.6

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      |+.||||.+....       ...++.+|+++++.+ +||||+++++++.+.+.+++||||+++++|.++++  .+++..+
T Consensus        49 ~~~vAiK~i~~~~-------~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~--~l~~~~~  119 (361)
T 4f9c_A           49 EEKIALKHLIPTS-------HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN--SLSFQEV  119 (361)
T ss_dssp             EEEEEEEEECTTS-------CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT--TCCHHHH
T ss_pred             CCEEEEEEEcccc-------CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc--CCCHHHH
Confidence            5689999986432       134577999999998 69999999999999999999999999999999985  5999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC-CCeEEcccccccccCcc----------------------------
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDAS-GSVKLADFGLAKATTMN----------------------------  131 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~-~~~~l~df~~~~~~~~~----------------------------  131 (247)
                      ..++.|++.||+|||++||+||||||+||+++.+ +.++|+|||++......                            
T Consensus       120 ~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (361)
T 4f9c_A          120 REYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSR  199 (361)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------
T ss_pred             HHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999999876 79999999998643221                            


Q ss_pred             --ccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCh-hhHHHHHhhc----------------
Q 041080          132 --DLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLE-GVQALFRIGK----------------  192 (247)
Q Consensus       132 --~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~-~~~~~~~~~~----------------  192 (247)
                        ......||+.|+|||.+.+... ++.++||||+||++|+|++|+.||.... ..+....+..                
T Consensus       200 ~~~~~~~~GT~~Y~APE~l~~~~~-y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~  278 (361)
T 4f9c_A          200 RQQVAPRAGTPGFRAPEVLTKCPN-QTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGK  278 (361)
T ss_dssp             ------CCCCGGGCCHHHHTTCSC-CCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTE
T ss_pred             cccccccccCccccCHHHHcCCCC-CCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccc
Confidence              1233569999999999865433 7899999999999999999999985432 2221111100                


Q ss_pred             ----------------------C---------------CCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          193 ----------------------G---------------ELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       193 ----------------------~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                                            .               ........+|+++++||.+||..||.+|+|++|+|+||||+.
T Consensus       279 ~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          279 SILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             EEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             cccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                                  0               000112457899999999999999999999999999999997


Q ss_pred             C
Q 041080          236 P  236 (247)
Q Consensus       236 ~  236 (247)
                      .
T Consensus       359 i  359 (361)
T 4f9c_A          359 M  359 (361)
T ss_dssp             C
T ss_pred             C
Confidence            5


No 17 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=1.5e-51  Score=351.19  Aligned_cols=232  Identities=29%  Similarity=0.453  Sum_probs=202.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||+|++...     .....+.+.+|+.+|+.++||||+++++++.+.+.+++||||++||+|.+++.+  ..+++.
T Consensus       181 tg~~~AiK~i~~~-----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~  255 (573)
T 3uto_A          181 TGNNFAAKFVMTP-----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED  255 (573)
T ss_dssp             TCCEEEEEEEECC-----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHH
T ss_pred             CCCEEEEEEEecc-----chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHH
Confidence            5889999999753     234456788999999999999999999999999999999999999999998854  359999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC--CCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS--GSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~--~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .+..++.||+.||.|||++||+||||||+||+++.+  +.+||+|||++....... .....||+.|+|||.+.+..  +
T Consensus       256 ~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~--y  333 (573)
T 3uto_A          256 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP--V  333 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCC--B
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCC--C
Confidence            999999999999999999999999999999999854  899999999997655433 34567999999999997654  8


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC---CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP---SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++||||+||++|+|++|..||...........+......   .....+|+++++||.+||..||.+|||++|+|+|||
T Consensus       334 ~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw  413 (573)
T 3uto_A          334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW  413 (573)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence            99999999999999999999999998888887777665432   223578999999999999999999999999999999


Q ss_pred             CCCCCCC
Q 041080          233 VKRPLQT  239 (247)
Q Consensus       233 ~~~~~~~  239 (247)
                      |+.....
T Consensus       414 ~~~~~~~  420 (573)
T 3uto_A          414 LTPGNAP  420 (573)
T ss_dssp             TSCCCCT
T ss_pred             cCCCCCC
Confidence            9976443


No 18 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=5.6e-52  Score=333.63  Aligned_cols=223  Identities=26%  Similarity=0.461  Sum_probs=190.1

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCC-Cceeeeceeeec-CCcEEEEEeccccCcHHHHHHhc------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQ-DNIVQYLGTDKD-ENRLYIFLELVTKGSLANLYQKY------   73 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~------   73 (247)
                      ++.||||.+...    ......+.+.+|+.++.+++| ||||++++++.+ ++.+++|||||++|+|.+++++.      
T Consensus        94 ~k~VAvK~l~~~----~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~  169 (353)
T 4ase_A           94 CRTVAVKMLKEG----ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP  169 (353)
T ss_dssp             EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCC
T ss_pred             CeEEEEEEEccc----cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhccccccc
Confidence            467999998643    234456779999999999975 899999999865 45789999999999999999642      


Q ss_pred             -----------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCC
Q 041080           74 -----------HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKG  138 (247)
Q Consensus        74 -----------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~  138 (247)
                                 .+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++......    .....|
T Consensus       170 ~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~g  249 (353)
T 4ase_A          170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL  249 (353)
T ss_dssp             C-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEE
T ss_pred             ccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccc
Confidence                       27899999999999999999999999999999999999999999999999997654332    223457


Q ss_pred             CCCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhH-HHHHhhcCCCCCCCCcCCHHHHHHHHHHhcC
Q 041080          139 TPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQ-ALFRIGKGELPSVPSSLSRDARDFILKCLQV  216 (247)
Q Consensus       139 ~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  216 (247)
                      ++.|+|||.+.+..  ++.++|||||||++|||++ |..||....... ....+..+..+..|..+++++.+++.+||+.
T Consensus       250 t~~ymAPE~l~~~~--y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~  327 (353)
T 4ase_A          250 PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHG  327 (353)
T ss_dssp             CGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             cccccCHHHHhcCC--CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCc
Confidence            88999999997655  8999999999999999998 899998765443 4455556666778889999999999999999


Q ss_pred             CCCCCCChhhhhcC
Q 041080          217 NPNDRPTVTELMEH  230 (247)
Q Consensus       217 ~p~~Rps~~~il~~  230 (247)
                      ||.+|||+++|++|
T Consensus       328 dP~~RPt~~eil~~  341 (353)
T 4ase_A          328 EPSQRPTFSELVEH  341 (353)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999987


No 19 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=8.4e-50  Score=320.13  Aligned_cols=232  Identities=26%  Similarity=0.477  Sum_probs=203.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||||++.....   .....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++.. ..+++..
T Consensus        39 ~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~  115 (328)
T 3fe3_A           39 TGREVAIKIIDKTQL---NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKE  115 (328)
T ss_dssp             TCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHH
T ss_pred             CCCEEEEEEEEhhcC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHH
Confidence            588999999976532   345567788999999999999999999999999999999999999999998865 4699999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCCCcc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++...... ......|++.|+|||.+.+... .+.+
T Consensus       116 ~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~  194 (328)
T 3fe3_A          116 ARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY-DGPE  194 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCC-CSHH
T ss_pred             HHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCc-CCch
Confidence            9999999999999999999999999999999999999999999998654432 3445669999999999976542 3579


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      +||||+|+++|+|++|..||...........+..+.. ..+...++++.+++.+||..||.+|||++++++||||+...
T Consensus       195 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             hhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence            9999999999999999999999888777777766544 56678899999999999999999999999999999998754


No 20 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=2.1e-49  Score=314.04  Aligned_cols=230  Identities=36%  Similarity=0.625  Sum_probs=199.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      +|+.||||++......     ..+.+.+|+.++++++||||+++++++..++..++||||+++++|.+++.+..+++..+
T Consensus        44 ~~~~vaiK~~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  118 (297)
T 3fxz_A           44 TGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI  118 (297)
T ss_dssp             TCCEEEEEEEEGGGCS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHH
T ss_pred             CCcEEEEEEeeccccc-----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHH
Confidence            4789999999764321     24567899999999999999999999999999999999999999999999989999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCCCCCcc
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      +.++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.......  .....|++.|+|||.+.+..  ++.+
T Consensus       119 ~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~  196 (297)
T 3fxz_A          119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA--YGPK  196 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSC--BCTH
T ss_pred             HHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCC--CCcH
Confidence            9999999999999999999999999999999999999999999986544332  33456899999999996654  7899


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC--CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL--PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      +||||||+++|+|++|..||...........+.....  ...+..+++.+++++.+||+.||.+|||++++++||||+..
T Consensus       197 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence            9999999999999999999988776655544433322  23456789999999999999999999999999999999975


Q ss_pred             C
Q 041080          237 L  237 (247)
Q Consensus       237 ~  237 (247)
                      .
T Consensus       277 ~  277 (297)
T 3fxz_A          277 K  277 (297)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 21 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.9e-49  Score=319.91  Aligned_cols=233  Identities=27%  Similarity=0.483  Sum_probs=195.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||||++......    ...+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.. ..+++..
T Consensus        34 ~~~~vAiK~~~~~~~~----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~  109 (347)
T 3zgw_A           34 TGEMVAIKIMDKNTLG----SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEE  109 (347)
T ss_dssp             TCCEEEEEEEESSCC-------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHH
T ss_pred             CCCEEEEEEEEccccc----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHH
Confidence            4889999999765432    2345678999999999999999999999999999999999999999998855 4599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc---ccccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN---DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++......   ......|++.|+|||.+.+... .+
T Consensus       110 ~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~  188 (347)
T 3zgw_A          110 TRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSY-LG  188 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--------------CGGGCCHHHHTTC----C
T ss_pred             HHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCccccccCCccCccCHHHHcCCCC-CC
Confidence            9999999999999999999999999999999999999999999998654332   2344568999999999975442 48


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      .++||||+|+++|+|++|..||...........+..+.. ..+..+++++.+++.+||+.||.+|||++++++||||+..
T Consensus       189 ~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~  267 (347)
T 3zgw_A          189 SEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY-DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD  267 (347)
T ss_dssp             CHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred             cHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence            899999999999999999999998888777777766544 5677899999999999999999999999999999999875


Q ss_pred             CCC
Q 041080          237 LQT  239 (247)
Q Consensus       237 ~~~  239 (247)
                      ...
T Consensus       268 ~~~  270 (347)
T 3zgw_A          268 YNY  270 (347)
T ss_dssp             TCS
T ss_pred             CCC
Confidence            443


No 22 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=8.1e-49  Score=315.32  Aligned_cols=231  Identities=28%  Similarity=0.468  Sum_probs=199.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.....  ......+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|..++.+. .+++..
T Consensus        29 ~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~  106 (337)
T 1o6l_A           29 TGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEER  106 (337)
T ss_dssp             TCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHH
T ss_pred             CCCEEEEEEEeHHHh--hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHH
Confidence            488999999976421  12223556789999999999999999999999999999999999999999988764 589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc--cccccCCCCCCccCCcccccCCCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM--NDLKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      ++.++.|++.||.|||++||+|+||||+||+++.+|.++|+|||++.....  .......|++.|+|||.+.+..  ++.
T Consensus       107 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~  184 (337)
T 1o6l_A          107 ARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND--YGR  184 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSC--BCT
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCC--CCc
Confidence            999999999999999999999999999999999999999999999875322  2334556899999999996544  789


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC-----ChhhhhcCcc
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRP-----TVTELMEHPF  232 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~il~~p~  232 (247)
                      ++|+||||+++|+|++|..||...+.......+.... ..++..++++++++|.+||..+|.+||     +++++++|||
T Consensus       185 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~  263 (337)
T 1o6l_A          185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE-IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             hhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence            9999999999999999999998887777766665543 356778999999999999999999999     8999999999


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      |+..
T Consensus       264 f~~~  267 (337)
T 1o6l_A          264 FLSI  267 (337)
T ss_dssp             GTTC
T ss_pred             cCCC
Confidence            9753


No 23 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=2e-48  Score=315.65  Aligned_cols=234  Identities=31%  Similarity=0.481  Sum_probs=201.0

Q ss_pred             CCceEEEEEEeecCCCc-cchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGA-QGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||+|++....... ......+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++... .+++.
T Consensus        36 ~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~  115 (361)
T 2yab_A           36 TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE  115 (361)
T ss_dssp             TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHH
T ss_pred             CCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHH
Confidence            48899999998754322 12224567889999999999999999999999999999999999999999999764 49999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC----CeEEcccccccccCcc-ccccCCCCCCccCCcccccCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG----SVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~----~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      .++.++.|++.||.|||+.|++|+||||+||+++.++    .++|+|||++...... ......|++.|+|||.+.+.. 
T Consensus       116 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-  194 (361)
T 2yab_A          116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP-  194 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCC-
Confidence            9999999999999999999999999999999998877    7999999998765433 234556899999999996544 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                       ++.++|+||+|+++|+|++|..||...........+........   ...++++++++|.+||..||.+|||++++++|
T Consensus       195 -~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          195 -LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             -CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence             78999999999999999999999998887777777666543222   25689999999999999999999999999999


Q ss_pred             ccCCCC
Q 041080          231 PFVKRP  236 (247)
Q Consensus       231 p~~~~~  236 (247)
                      |||+..
T Consensus       274 p~~~~~  279 (361)
T 2yab_A          274 PWITPV  279 (361)
T ss_dssp             TTTSCS
T ss_pred             cCcCCC
Confidence            999853


No 24 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-48  Score=310.96  Aligned_cols=230  Identities=26%  Similarity=0.473  Sum_probs=200.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++......  .....+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.+++.+. .+++..
T Consensus        30 ~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~  107 (318)
T 1fot_A           30 NGRYYAMKVLKKEIVV--RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV  107 (318)
T ss_dssp             TCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHH
T ss_pred             CCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHH
Confidence            5889999999764211  1223556789999999999999999999999999999999999999999999764 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcch
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTA  159 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~  159 (247)
                      ++.++.|++.||.+||++|++|+||||+||+++.+|.++|+|||++..... ......|++.|+|||.+.+..  ++.++
T Consensus       108 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~  184 (318)
T 1fot_A          108 AKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-VTYTLCGTPDYIAPEVVSTKP--YNKSI  184 (318)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS-CBCCCCSCTTTCCHHHHTTCC--BCTTH
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC-ccccccCCccccCHhHhcCCC--CCccc
Confidence            999999999999999999999999999999999999999999999875443 234456899999999996544  78999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC-----ChhhhhcCccCC
Q 041080          160 DIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRP-----TVTELMEHPFVK  234 (247)
Q Consensus       160 Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~il~~p~~~  234 (247)
                      |+||||+++|+|++|..||...+.......+.... ..++..+++++++++.+||..+|.+||     +++++++||||+
T Consensus       185 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~  263 (318)
T 1fot_A          185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE-LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK  263 (318)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGS
T ss_pred             chhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcccc
Confidence            99999999999999999998887777777666654 356778999999999999999999999     999999999998


Q ss_pred             CC
Q 041080          235 RP  236 (247)
Q Consensus       235 ~~  236 (247)
                      ..
T Consensus       264 ~~  265 (318)
T 1fot_A          264 EV  265 (318)
T ss_dssp             SC
T ss_pred             CC
Confidence            53


No 25 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=7.4e-49  Score=317.44  Aligned_cols=231  Identities=27%  Similarity=0.455  Sum_probs=198.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++.....  ......+.+.+|..++..+ +||||+++++++.+.+..++||||+++++|.+++.+. .+++.
T Consensus        47 ~~~~~AvK~~~~~~~--~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~  124 (353)
T 3txo_A           47 TGDLYAVKVLKKDVI--LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA  124 (353)
T ss_dssp             TCCEEEEEEEEHHHH--HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHH
T ss_pred             CCCEEEEEEEEHHHh--cchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHH
Confidence            478999999976421  1233456678999999998 6999999999999999999999999999999988664 59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc--cccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM--NDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....  .......|++.|+|||.+.+..  ++
T Consensus       125 ~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~  202 (353)
T 3txo_A          125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML--YG  202 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHH--CT
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCC--cC
Confidence            9999999999999999999999999999999999999999999999875332  2234556899999999996654  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh------hhhhcC
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV------TELMEH  230 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~------~~il~~  230 (247)
                      .++|+||||+++|+|++|..||...+..+....+..... .++..++++++++|.+||..+|.+||++      +++++|
T Consensus       203 ~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h  281 (353)
T 3txo_A          203 PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH  281 (353)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred             CccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence            899999999999999999999999888888877776543 5677899999999999999999999999      899999


Q ss_pred             ccCCCC
Q 041080          231 PFVKRP  236 (247)
Q Consensus       231 p~~~~~  236 (247)
                      |||+..
T Consensus       282 p~f~~~  287 (353)
T 3txo_A          282 PFFKEI  287 (353)
T ss_dssp             GGGTTC
T ss_pred             CcccCC
Confidence            999864


No 26 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=4.7e-48  Score=309.47  Aligned_cols=229  Identities=34%  Similarity=0.620  Sum_probs=199.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      +|+.||||++....     ....+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++++..+++..+
T Consensus        69 ~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~  143 (321)
T 2c30_A           69 SGRQVAVKMMDLRK-----QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI  143 (321)
T ss_dssp             TCCEEEEEEEETTT-----CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHH
T ss_pred             CCcEEEEEEEeccc-----hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHH
Confidence            58899999997543     2234567899999999999999999999999999999999999999999999888999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCCcc
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ..++.|++.||.+||+.|++|+||||+||+++.++.++|+|||++......  ......|++.|+|||.+.+..  ++.+
T Consensus       144 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~  221 (321)
T 2c30_A          144 ATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSL--YATE  221 (321)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCC--BCTH
T ss_pred             HHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCC--CCch
Confidence            999999999999999999999999999999999999999999998654432  233456899999999996543  7889


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC--CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV--PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      +|+||||+++|+|++|..||...........+.....+..  ...+++.+++++.+||..+|.+|||++++++||||+..
T Consensus       222 ~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence            9999999999999999999988777666666655544333  34689999999999999999999999999999999875


No 27 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.7e-49  Score=311.88  Aligned_cols=223  Identities=25%  Similarity=0.335  Sum_probs=172.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC----cEEEEEeccccCcHHHHHHhcCCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN----RLYIFLELVTKGSLANLYQKYHLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~   76 (247)
                      +|+.||||++...      .......+.|+..+.+++||||+++++++.+++    .+++||||+++|+|.+++++.+++
T Consensus        25 ~g~~VAvK~l~~~------~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~   98 (303)
T 3hmm_A           25 RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT   98 (303)
T ss_dssp             TTEEEEEEEECGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBC
T ss_pred             CCEEEEEEEECcc------chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCC
Confidence            4789999998542      122223456777778899999999999987653    579999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhC--------CeeecCCCCCcEEEcCCCCeEEcccccccccCccc------cccCCCCCCc
Q 041080           77 DSQVSSYTRQILNGLVYLHER--------NVVHRDIKCANILVDASGSVKLADFGLAKATTMND------LKSCKGTPFW  142 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~--------~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~  142 (247)
                      ++.+.+++.|++.||+|||++        ||+||||||+||+++.++.+||+|||++.......      .....||+.|
T Consensus        99 ~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~y  178 (303)
T 3hmm_A           99 VEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY  178 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccc
Confidence            999999999999999999987        99999999999999999999999999986543222      2234699999


Q ss_pred             cCCcccccCCC----CCCcchhHHHHHHHHHHHHhCCCCCCCCh---------------hhHHHHHhhc-CCCCCCCCc-
Q 041080          143 MAPEVVNSKND----GYGLTADIWSLGCTVLEMLTRRPPYSHLE---------------GVQALFRIGK-GELPSVPSS-  201 (247)
Q Consensus       143 ~aPE~~~~~~~----~~~~~~Di~slG~ll~~l~~g~~p~~~~~---------------~~~~~~~~~~-~~~~~~~~~-  201 (247)
                      +|||.+.+...    .++.++||||||+++|||++|..|+....               .......+.. ...+.++.. 
T Consensus       179 mAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~  258 (303)
T 3hmm_A          179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW  258 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG
T ss_pred             cCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccc
Confidence            99999865421    25678999999999999999976542211               1112222222 222344432 


Q ss_pred             ----CCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          202 ----LSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       202 ----~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                          .++.+.+++.+||+.||.+|||+.++++
T Consensus       259 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          259 QSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence                3357899999999999999999999976


No 28 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=7.9e-48  Score=308.78  Aligned_cols=234  Identities=29%  Similarity=0.503  Sum_probs=199.1

Q ss_pred             CCceEEEEEEeecCCCc-cchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGA-QGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||+|++....... ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++... .+++.
T Consensus        35 ~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  114 (326)
T 2y0a_A           35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE  114 (326)
T ss_dssp             TCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHH
T ss_pred             CCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHH
Confidence            47899999998754322 12224667889999999999999999999999999999999999999999999654 48999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC----CeEEcccccccccCcc-ccccCCCCCCccCCcccccCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG----SVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~----~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      .++.++.|++.||.|||+.|++|+||||+||+++.++    .++|+|||.+...... ......|++.|+|||.+.+.. 
T Consensus       115 ~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-  193 (326)
T 2y0a_A          115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEP-  193 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCC-
Confidence            9999999999999999999999999999999999887    7999999998765432 334456899999999996544 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC---CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS---VPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                       ++.++|+||||+++|+|++|..||...........+.......   ....+++.++++|.+||..+|.+|||++++++|
T Consensus       194 -~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          194 -LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             -CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             7899999999999999999999998877766666555443322   125689999999999999999999999999999


Q ss_pred             ccCCCC
Q 041080          231 PFVKRP  236 (247)
Q Consensus       231 p~~~~~  236 (247)
                      |||+..
T Consensus       273 p~~~~~  278 (326)
T 2y0a_A          273 PWIKPK  278 (326)
T ss_dssp             TTTSCC
T ss_pred             CCccCC
Confidence            999864


No 29 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.1e-47  Score=318.91  Aligned_cols=230  Identities=28%  Similarity=0.462  Sum_probs=199.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++.....   .....+.+.+|+.+++.++||||+++++++.+.+..++||||+.+++|.+.+... .+++..
T Consensus        35 ~~~~~a~K~i~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~  111 (444)
T 3soa_A           35 AGQEYAAMIINTKKL---SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD  111 (444)
T ss_dssp             TTEEEEEEEEESCSC---HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHH
T ss_pred             CCcEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHH
Confidence            478999999976532   3445667889999999999999999999999999999999999999998888664 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc---CCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVD---ASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~---~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +..++.|++.||.|||++||+|+||||+||+++   .++.++|+|||++.......  .....|++.|+|||.+.+..  
T Consensus       112 ~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--  189 (444)
T 3soa_A          112 ASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP--  189 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCC--
Confidence            999999999999999999999999999999998   45789999999996554332  23456899999999996544  


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCc
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p  231 (247)
                      ++.++||||+|+++|+|++|..||...+.......+..+.....   ...++++++++|.+||+.||.+|||++++|+||
T Consensus       190 ~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp  269 (444)
T 3soa_A          190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP  269 (444)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred             CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence            78999999999999999999999998888777777766544222   247899999999999999999999999999999


Q ss_pred             cCCC
Q 041080          232 FVKR  235 (247)
Q Consensus       232 ~~~~  235 (247)
                      ||+.
T Consensus       270 ~~~~  273 (444)
T 3soa_A          270 WISH  273 (444)
T ss_dssp             TTHH
T ss_pred             cccC
Confidence            9974


No 30 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=3.1e-48  Score=312.78  Aligned_cols=231  Identities=27%  Similarity=0.472  Sum_probs=200.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~   78 (247)
                      +|+.||||++......  .....+.+..|..++..+ +||||+++++++.+.+..++||||+++|+|.+++.+ ..+++.
T Consensus        41 ~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~  118 (345)
T 1xjd_A           41 TNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS  118 (345)
T ss_dssp             TTEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHH
T ss_pred             CCCEEEEEEEEhHHhh--hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHH
Confidence            4789999999764211  122345677899999887 899999999999999999999999999999999876 469999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccC--ccccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATT--MNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.|||++|++|+||||+||+++.+|.++|+|||++....  ........|++.|+|||.+.+..  ++
T Consensus       119 ~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~  196 (345)
T 1xjd_A          119 RATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK--YN  196 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC--BC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCC--CC
Confidence            999999999999999999999999999999999999999999999987532  22344566899999999996544  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChh-hhhcCccCCC
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVT-ELMEHPFVKR  235 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~il~~p~~~~  235 (247)
                      .++|+||||+++|+|++|..||...+.......+.... +.++..++++++++|.+||..+|.+||++. ++++||||+.
T Consensus       197 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          197 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN-PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             ChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCC-CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence            99999999999999999999999888777777766554 456778999999999999999999999998 9999999986


Q ss_pred             C
Q 041080          236 P  236 (247)
Q Consensus       236 ~  236 (247)
                      .
T Consensus       276 ~  276 (345)
T 1xjd_A          276 I  276 (345)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 31 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=4.7e-48  Score=312.51  Aligned_cols=229  Identities=28%  Similarity=0.445  Sum_probs=200.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.....  ......+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.+++.+. .+++..
T Consensus        65 ~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~  142 (350)
T 1rdq_E           65 SGNHYAMKILDKQKV--VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH  142 (350)
T ss_dssp             TCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHH
T ss_pred             CCCEEEEEEEEhHHh--ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHH
Confidence            488999999976432  11223567889999999999999999999999999999999999999999998764 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcch
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTA  159 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~  159 (247)
                      ++.++.|++.||.+||++||+|+||||+||+++.+|.++|+|||.+...... .....|++.|+|||.+.+..  ++.++
T Consensus       143 ~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~  219 (350)
T 1rdq_E          143 ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-TWTLCGTPEALAPEIILSKG--YNKAV  219 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-BCCCEECGGGCCHHHHTTCC--BCTHH
T ss_pred             HHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-cccccCCccccCHHHhcCCC--CCCcC
Confidence            9999999999999999999999999999999999999999999998765433 33456899999999996544  78999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCC-----hhhhhcCccCC
Q 041080          160 DIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPT-----VTELMEHPFVK  234 (247)
Q Consensus       160 Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~p~~~  234 (247)
                      |+||||+++|+|++|..||...........+..+. ..++..++++++++|.+||+.||.+||+     ++++++||||+
T Consensus       220 DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~  298 (350)
T 1rdq_E          220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK-VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA  298 (350)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred             CEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcC
Confidence            99999999999999999999888777777776654 3567789999999999999999999998     99999999998


Q ss_pred             C
Q 041080          235 R  235 (247)
Q Consensus       235 ~  235 (247)
                      .
T Consensus       299 ~  299 (350)
T 1rdq_E          299 T  299 (350)
T ss_dssp             T
T ss_pred             C
Confidence            5


No 32 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.2e-47  Score=314.82  Aligned_cols=234  Identities=26%  Similarity=0.464  Sum_probs=192.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh---cCCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK---YHLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~   77 (247)
                      +|+.||||++....   ......+.+.+|+.+++.++||||+++++++.+++..++||||+++++|.+++..   ..+++
T Consensus        51 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  127 (389)
T 3gni_B           51 TGEYVTVRRINLEA---CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNE  127 (389)
T ss_dssp             TCCEEEEEEEEGGG---SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCH
T ss_pred             CCCEEEEEEecccc---cChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCH
Confidence            48899999998653   2345677888999999999999999999999999999999999999999999976   35999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc---------ccccCCCCCCccCCccc
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN---------DLKSCKGTPFWMAPEVV  148 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~---------~~~~~~~~~~~~aPE~~  148 (247)
                      ..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+......         ......++..|+|||.+
T Consensus       128 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (389)
T 3gni_B          128 LAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL  207 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHH
Confidence            999999999999999999999999999999999999999999999987432211         12223578889999999


Q ss_pred             ccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC--------------------------------
Q 041080          149 NSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP--------------------------------  196 (247)
Q Consensus       149 ~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------------------  196 (247)
                      .+....++.++||||||+++|+|++|..||...........+.....+                                
T Consensus       208 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (389)
T 3gni_B          208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTT  287 (389)
T ss_dssp             STTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------------
T ss_pred             hccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccccccccccc
Confidence            764445899999999999999999999999876655544333221111                                


Q ss_pred             -------------CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          197 -------------SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       197 -------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                                   ..+..+++++++||.+||+.||.+|||++++++||||+...
T Consensus       288 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          288 STPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             ------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             CccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence                         23456789999999999999999999999999999999754


No 33 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=5.1e-48  Score=316.13  Aligned_cols=231  Identities=27%  Similarity=0.486  Sum_probs=192.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++.+....  .....+.+.+|..++.++ +||||+++++++.+.+..++||||+++|+|..++.+. .+++.
T Consensus        76 ~~~~~AvK~~~k~~~~--~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~  153 (396)
T 4dc2_A           76 TDRIYAMRVVKKELVN--DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE  153 (396)
T ss_dssp             TTEEEEEEEEEGGGTC------CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHH
T ss_pred             CCCEEEEEEEEhhhcc--CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHH
Confidence            4788999999875432  233345677899999887 8999999999999999999999999999999988764 59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccC--ccccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATT--MNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.|||++||+||||||+||+++.+|.++|+|||++....  ........|++.|+|||.+.+..  ++
T Consensus       154 ~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~~  231 (396)
T 4dc2_A          154 HARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED--YG  231 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCC--BC
T ss_pred             HHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCC--CC
Confidence            999999999999999999999999999999999999999999999987422  23344566899999999996654  79


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCh---------hhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh---
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLE---------GVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV---  224 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~---  224 (247)
                      .++|+||||+++|+|++|..||....         .......+.. ....++..++++++++|.+||+.||.+||++   
T Consensus       232 ~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~  310 (396)
T 4dc2_A          232 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQ  310 (396)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTT
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc-cccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCC
Confidence            99999999999999999999996432         1122233333 3446778899999999999999999999985   


Q ss_pred             ---hhhhcCccCCCC
Q 041080          225 ---TELMEHPFVKRP  236 (247)
Q Consensus       225 ---~~il~~p~~~~~  236 (247)
                         +++++||||+..
T Consensus       311 ~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          311 TGFADIQGHPFFRNV  325 (396)
T ss_dssp             THHHHHHHSTTTTTC
T ss_pred             CCHHHHhcCccccCC
Confidence               799999999864


No 34 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.1e-47  Score=305.95  Aligned_cols=233  Identities=30%  Similarity=0.510  Sum_probs=189.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||+|++....   ........+.+|+.++++++||||+++++++.+++..++||||+++ +|.+.+...  .+++.
T Consensus        44 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~  119 (311)
T 3niz_A           44 QGRIVALKRIRLDA---EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS  119 (311)
T ss_dssp             TSCEEEEEEEC---------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHH
T ss_pred             CCCEEEEEEEeccc---ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHH
Confidence            47899999997543   2233456788999999999999999999999999999999999986 888877654  38999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+......  ......+++.|+|||.+.+.. .++
T Consensus       120 ~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~  198 (311)
T 3niz_A          120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK-KYS  198 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCC-SCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCC-CCC
Confidence            99999999999999999999999999999999999999999999998754422  233456899999999986533 378


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc---CCCC--------------------------CCCCcCCHHHH
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK---GELP--------------------------SVPSSLSRDAR  207 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~---~~~~--------------------------~~~~~~~~~~~  207 (247)
                      .++|+||+|+++|+|++|..||......+....+..   ...+                          .....+++++.
T Consensus       199 ~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (311)
T 3niz_A          199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI  278 (311)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHH
T ss_pred             chHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHH
Confidence            999999999999999999999987766655444321   0000                          01234688999


Q ss_pred             HHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          208 DFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       208 ~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      ++|.+||+.||.+|||++|+++||||+..-.
T Consensus       279 ~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          279 DLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             HHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence            9999999999999999999999999997643


No 35 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.6e-47  Score=308.93  Aligned_cols=231  Identities=28%  Similarity=0.485  Sum_probs=195.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++.....  ......+.+.+|..++.++ +||||+++++++.+.+..++||||+++++|.+++.+. .+++.
T Consensus        33 ~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~  110 (345)
T 3a8x_A           33 TDRIYAMKVVKKELV--NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE  110 (345)
T ss_dssp             TTEEEEEEEEEGGGS--CSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHH
T ss_pred             CCCEEEEEEEEhHHh--cchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHH
Confidence            478999999986542  2345567788999999998 8999999999999999999999999999999988764 59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccC--ccccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATT--MNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.+||++||+|+||||+||+++.++.++|+|||++....  ........|++.|+|||.+.+..  ++
T Consensus       111 ~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~  188 (345)
T 3a8x_A          111 HARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED--YG  188 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCC--BC
T ss_pred             HHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCC--CC
Confidence            999999999999999999999999999999999999999999999987532  22344566899999999996544  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCC---------hhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh---
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHL---------EGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV---  224 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~---  224 (247)
                      .++|+||||+++|+|++|..||...         ........+... ...++..++.+++++|.+||+.+|.+||++   
T Consensus       189 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~  267 (345)
T 3a8x_A          189 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQ  267 (345)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTT
T ss_pred             hHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCc
Confidence            9999999999999999999999652         122223333333 345677899999999999999999999996   


Q ss_pred             ---hhhhcCccCCCC
Q 041080          225 ---TELMEHPFVKRP  236 (247)
Q Consensus       225 ---~~il~~p~~~~~  236 (247)
                         +++++||||+..
T Consensus       268 ~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          268 TGFADIQGHPFFRNV  282 (345)
T ss_dssp             THHHHHHTSGGGTTC
T ss_pred             CCHHHHhcCCccCCC
Confidence               799999999853


No 36 
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=4.9e-48  Score=303.57  Aligned_cols=238  Identities=29%  Similarity=0.521  Sum_probs=199.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||||++.....  ........+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++.. ..+++..
T Consensus        33 ~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~  110 (279)
T 3fdn_A           33 SKFILALKVLFKAQL--EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR  110 (279)
T ss_dssp             TCCEEEEEEEEHHHH--HHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEEecccc--chhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHH
Confidence            467899999975321  1222356688999999999999999999999999999999999999999998876 4589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcch
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTA  159 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~  159 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+............++..|+|||.+.+..  ++.++
T Consensus       111 ~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~  188 (279)
T 3fdn_A          111 TATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM--HDEKV  188 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCC--CCTTH
T ss_pred             HHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCC--CCccc
Confidence            9999999999999999999999999999999999999999999998766555555667899999999986544  78899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC-
Q 041080          160 DIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ-  238 (247)
Q Consensus       160 Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~-  238 (247)
                      |+||||+++++|++|..||...........+.... ...+..+++.+++++.+||+.+|.+|||++++++||||+.... 
T Consensus       189 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~  267 (279)
T 3fdn_A          189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK  267 (279)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC-CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCccC
Confidence            99999999999999999999888777766665543 3556778999999999999999999999999999999998443 


Q ss_pred             CCCCc
Q 041080          239 TPRCG  243 (247)
Q Consensus       239 ~~~~~  243 (247)
                      ...|.
T Consensus       268 ~~~~~  272 (279)
T 3fdn_A          268 PSNCQ  272 (279)
T ss_dssp             CCCC-
T ss_pred             ccccc
Confidence            33554


No 37 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=3.6e-48  Score=313.73  Aligned_cols=232  Identities=32%  Similarity=0.501  Sum_probs=192.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-----CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-----HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~   75 (247)
                      +|+.||||++.............+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.+.+.+.     .+
T Consensus        48 ~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~  127 (351)
T 3c0i_A           48 TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY  127 (351)
T ss_dssp             TCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCC
Confidence            4889999999754322222223567889999999999999999999999999999999999999998877543     38


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC---eEEcccccccccCccc--cccCCCCCCccCCccccc
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS---VKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNS  150 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~---~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~  150 (247)
                      ++..++.++.|++.||.|||++|++|+||||+||+++.++.   ++|+|||.+.......  .....|++.|+|||.+.+
T Consensus       128 ~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (351)
T 3c0i_A          128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR  207 (351)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcC
Confidence            99999999999999999999999999999999999987655   9999999987654432  234568999999999965


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCC---CcCCHHHHHHHHHHhcCCCCCCCChhhh
Q 041080          151 KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVP---SSLSRDARDFILKCLQVNPNDRPTVTEL  227 (247)
Q Consensus       151 ~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~i  227 (247)
                      ..  ++.++||||||+++|+|++|..||..... .....+........+   ..++++++++|.+||..||.+|||+.++
T Consensus       208 ~~--~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~  284 (351)
T 3c0i_A          208 EP--YGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEA  284 (351)
T ss_dssp             CC--BCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             CC--CCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            44  78999999999999999999999987543 334444443332222   4689999999999999999999999999


Q ss_pred             hcCccCCC
Q 041080          228 MEHPFVKR  235 (247)
Q Consensus       228 l~~p~~~~  235 (247)
                      ++||||+.
T Consensus       285 l~hp~~~~  292 (351)
T 3c0i_A          285 LNHPWLKE  292 (351)
T ss_dssp             HTSHHHHT
T ss_pred             hcChhhcC
Confidence            99999985


No 38 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.8e-48  Score=306.96  Aligned_cols=235  Identities=31%  Similarity=0.533  Sum_probs=193.2

Q ss_pred             CCceEEEEEEeecCCCcc---------------------chHHHHHHHHHHHHHhhcCCCceeeeceeeec--CCcEEEE
Q 041080            1 DGFFFAVKEVSLQDQGAQ---------------------GKQSILQLEQEISLLSQFEQDNIVQYLGTDKD--ENRLYIF   57 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~---------------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv   57 (247)
                      +|+.||||++........                     .....+.+.+|+.++++++||||+++++++.+  .+..++|
T Consensus        37 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  116 (298)
T 2zv2_A           37 DNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMV  116 (298)
T ss_dssp             TTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEE
T ss_pred             CCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEE
Confidence            478999999976532111                     12234668899999999999999999999886  5689999


Q ss_pred             EeccccCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--ccc
Q 041080           58 LELVTKGSLANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKS  135 (247)
Q Consensus        58 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~  135 (247)
                      |||+++++|.+++....+++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||++.......  ...
T Consensus       117 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  196 (298)
T 2zv2_A          117 FELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN  196 (298)
T ss_dssp             EECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECC
T ss_pred             EecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccC
Confidence            999999999888777789999999999999999999999999999999999999999999999999986544332  234


Q ss_pred             CCCCCCccCCcccccCCCC-CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC-CCCCcCCHHHHHHHHHH
Q 041080          136 CKGTPFWMAPEVVNSKNDG-YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP-SVPSSLSRDARDFILKC  213 (247)
Q Consensus       136 ~~~~~~~~aPE~~~~~~~~-~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~  213 (247)
                      ..+++.|+|||.+.+.... .+.++|+||||+++|+|++|..||...........+...... .....++++++++|.+|
T Consensus       197 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  276 (298)
T 2zv2_A          197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRM  276 (298)
T ss_dssp             CCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHH
T ss_pred             CcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHH
Confidence            5689999999998654422 367899999999999999999999887766665555444332 22357899999999999


Q ss_pred             hcCCCCCCCChhhhhcCccCCC
Q 041080          214 LQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       214 l~~~p~~Rps~~~il~~p~~~~  235 (247)
                      |+.||.+|||++++++||||++
T Consensus       277 l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          277 LDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             TCSCTTTSCCHHHHTTCHHHHC
T ss_pred             hhcChhhCCCHHHHhcCccccC
Confidence            9999999999999999999963


No 39 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.5e-47  Score=307.27  Aligned_cols=232  Identities=28%  Similarity=0.447  Sum_probs=190.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++...... ........+.+|+.++++++||||+++++++...+..++||||+++++|.+++.+. .+++..
T Consensus        44 ~~~~~aiK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  122 (327)
T 3a62_A           44 TGKIFAMKVLKKAMIV-RNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDT  122 (327)
T ss_dssp             TTCEEEEEEECCC---------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEEEHHHhh-hhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHH
Confidence            4789999999764321 12234556789999999999999999999999999999999999999999998764 489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      ++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||++......  ......|++.|+|||.+.+..  ++.
T Consensus       123 ~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~  200 (327)
T 3a62_A          123 ACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG--HNR  200 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSC--CCT
T ss_pred             HHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCC--CCC
Confidence            9999999999999999999999999999999999999999999998643322  233456899999999996544  789


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC-----ChhhhhcCcc
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRP-----TVTELMEHPF  232 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~il~~p~  232 (247)
                      ++|+||||+++|+|++|..||...........+..... .++..++++++++|.+||..+|.+||     +++++++|||
T Consensus       201 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~  279 (327)
T 3a62_A          201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF  279 (327)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred             cccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence            99999999999999999999998887777766665543 56678999999999999999999999     7889999999


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      |+..
T Consensus       280 f~~~  283 (327)
T 3a62_A          280 FRHI  283 (327)
T ss_dssp             GSSC
T ss_pred             ccCC
Confidence            9864


No 40 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.6e-47  Score=310.96  Aligned_cols=230  Identities=28%  Similarity=0.484  Sum_probs=198.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++.....   .....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+.+... .+++..
T Consensus        53 ~~~~~avK~~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~  129 (362)
T 2bdw_A           53 TGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD  129 (362)
T ss_dssp             TCCEEEEEEEETTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHH
T ss_pred             CCCEEEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHH
Confidence            478999999976532   3445677899999999999999999999999999999999999999998888654 489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC---CeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG---SVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~---~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.|||++||+|+||||+||+++.++   .++|+|||++....... .....|++.|+|||.+.+..  +
T Consensus       130 ~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~  207 (362)
T 2bdw_A          130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP--Y  207 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCC--C
T ss_pred             HHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCC--C
Confidence            999999999999999999999999999999998654   59999999987655333 33456899999999996544  7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCC---CcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVP---SSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++||||||+++|+|++|..||...+.......+..+......   ..++++++++|.+||..||.+|||++++++|||
T Consensus       208 ~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  287 (362)
T 2bdw_A          208 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW  287 (362)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            89999999999999999999999888777777766655432222   467999999999999999999999999999999


Q ss_pred             CCC
Q 041080          233 VKR  235 (247)
Q Consensus       233 ~~~  235 (247)
                      |+.
T Consensus       288 ~~~  290 (362)
T 2bdw_A          288 ICN  290 (362)
T ss_dssp             HHT
T ss_pred             cCC
Confidence            974


No 41 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.1e-47  Score=301.07  Aligned_cols=233  Identities=29%  Similarity=0.455  Sum_probs=187.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||+|++.....  ......+.+.+|+.+++.++||||+++++++.+.+..++||||+. ++|.+.+.. ..+++..
T Consensus        37 ~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~  113 (275)
T 2eue_A           37 TGQKVALKIINKKVL--AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDKMSEQE  113 (275)
T ss_dssp             TCCEEEEEEECSCC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCC-EEHHHHHHTSSSCCHHH
T ss_pred             CCCEEEEEEEEhhhc--chHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhcC-CcHHHHHHhcCCCCHHH
Confidence            478999999976432  223345678899999999999999999999999999999999994 577776654 4599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCCCcc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+....... .....+++.|+|||.+.+... .+.+
T Consensus       114 ~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~  192 (275)
T 2eue_A          114 ARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY-AGPE  192 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC---------------CTTCCHHHHCC------TH
T ss_pred             HHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcccccCCCCCcCcCCceeeeCCCC-CCcc
Confidence            99999999999999999999999999999999999999999999986544332 334458899999999865432 3789


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      +|+||+|+++++|++|+.||...........+.... ...+..+++.+.+++.+||+.+|.+|||++|+++||||+..+.
T Consensus       193 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~~  271 (275)
T 2eue_A          193 VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV-YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP  271 (275)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             cchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecccch
Confidence            999999999999999999999887777666665543 3567789999999999999999999999999999999998654


No 42 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.6e-48  Score=309.39  Aligned_cols=228  Identities=25%  Similarity=0.380  Sum_probs=197.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||+|.+...      ......+.+|+.+++.++||||+++++++.+.+..++||||+++++|.+++...  .+++.
T Consensus        29 ~~~~~a~K~~~~~------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~  102 (321)
T 1tki_A           29 SKKTYMAKFVKVK------GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNER  102 (321)
T ss_dssp             TTEEEEEEEECCC------THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHH
T ss_pred             CCcEEEEEEEecC------cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHH
Confidence            4788999998642      234556889999999999999999999999999999999999999999999764  48999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC--CCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA--SGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~--~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||++|++|+||||+||+++.  ++.++|+|||.+....... .....+++.|+|||.+.+..  +
T Consensus       103 ~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~  180 (321)
T 1tki_A          103 EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDV--V  180 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCE--E
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCC--C
Confidence            99999999999999999999999999999999987  7899999999987654332 23345889999999996544  6


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++|+||+|+++|+|++|..||...........+........   ...+++++++++.+||..||.+|||++++++|||
T Consensus       181 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  260 (321)
T 1tki_A          181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW  260 (321)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence            8899999999999999999999988887777776665544322   1468999999999999999999999999999999


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      |+..
T Consensus       261 ~~~~  264 (321)
T 1tki_A          261 LKQK  264 (321)
T ss_dssp             HHSC
T ss_pred             hccC
Confidence            9875


No 43 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=4.2e-48  Score=318.16  Aligned_cols=234  Identities=27%  Similarity=0.408  Sum_probs=198.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      +|+.||+|++.+....  .....+.+.+|+.+++.++||||+++++++.+.+..++||||++||+|.++++...+++..+
T Consensus        93 ~~~~~AiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~  170 (410)
T 3v8s_A           93 TRKVYAMKLLSKFEMI--KRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWA  170 (410)
T ss_dssp             TCCEEEEEEEEHHHHH--HTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHH
T ss_pred             CCcEEEEEEEehhhhh--hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHH
Confidence            4789999999753211  11112347789999999999999999999999999999999999999999999889999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCC--C
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDG--Y  155 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~--~  155 (247)
                      +.++.|++.||.|||++||+||||||+||+++.+|.++|+|||++.......   .....|++.|+|||.+.+....  +
T Consensus       171 ~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~  250 (410)
T 3v8s_A          171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYY  250 (410)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEE
T ss_pred             HHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCC
Confidence            9999999999999999999999999999999999999999999986554332   3356699999999998654322  6


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC---CCCCCCcCCHHHHHHHHHHhcCCCCC--CCChhhhhcC
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE---LPSVPSSLSRDARDFILKCLQVNPND--RPTVTELMEH  230 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~~il~~  230 (247)
                      +.++|+||||+++|+|++|..||...+.......+....   ..+....++++++++|.+||..+|.+  ||++++|++|
T Consensus       251 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          251 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             ETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             CCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            789999999999999999999999888777776665431   11223478999999999999998988  9999999999


Q ss_pred             ccCCCC
Q 041080          231 PFVKRP  236 (247)
Q Consensus       231 p~~~~~  236 (247)
                      |||+..
T Consensus       331 p~f~~~  336 (410)
T 3v8s_A          331 LFFKND  336 (410)
T ss_dssp             GGGCCS
T ss_pred             ccccCC
Confidence            999874


No 44 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=2.4e-48  Score=312.31  Aligned_cols=233  Identities=27%  Similarity=0.424  Sum_probs=193.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHH-hcCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQ-KYHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~   79 (247)
                      +|+.||||++......  .......+.+|+.+++.++||||+++++++...+..++||||+ +|+|.+++. ...+++..
T Consensus        33 ~~~~vaiK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~  109 (336)
T 3h4j_B           33 TQQKVALKFISRQLLK--KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDE  109 (336)
T ss_dssp             TCCEEEEEEEEHHHHH--HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHH
T ss_pred             CCCEEEEEEEehHHcc--chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHH
Confidence            4789999999753211  1122346889999999999999999999999999999999999 557877664 45699999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCCCcc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++....... .....|++.|+|||.+.+... .+.+
T Consensus       110 ~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~  188 (336)
T 3h4j_B          110 GRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY-AGPE  188 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGG-GCHH
T ss_pred             HHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCC-CCCc
Confidence            99999999999999999999999999999999999999999999987554332 345568999999999965442 3789


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      +||||+|+++|+|++|..||...........+... ....+..+++++.+++.+||..||.+|||++++++||||+..+.
T Consensus       189 ~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  267 (336)
T 3h4j_B          189 VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP  267 (336)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             cchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCc
Confidence            99999999999999999999775544433333222 23556778999999999999999999999999999999987544


No 45 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.8e-47  Score=309.16  Aligned_cols=229  Identities=25%  Similarity=0.415  Sum_probs=198.5

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      |+.||||++......  .....+.+..|..++..+ +||+|+++++++++.+..++||||++||+|.+++.+ ..+++..
T Consensus        45 ~~~~AiK~~~~~~~~--~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~  122 (353)
T 2i0e_A           45 DELYAVKILKKDVVI--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPH  122 (353)
T ss_dssp             EEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHH
T ss_pred             CCEEEEEEEEHHHhh--cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHH
Confidence            678999999764321  122355678899999988 799999999999999999999999999999999876 4699999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccC--ccccccCCCCCCccCCcccccCCCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATT--MNDLKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      ++.++.|++.||.|||++||+|+||||+||+++.+|.++|+|||++....  ........|++.|+|||.+.+..  ++.
T Consensus       123 ~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~  200 (353)
T 2i0e_A          123 AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQP--YGK  200 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC--BST
T ss_pred             HHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCC--cCC
Confidence            99999999999999999999999999999999999999999999987532  22344566899999999996544  789


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCC-----hhhhhcCcc
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPT-----VTELMEHPF  232 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~~~il~~p~  232 (247)
                      ++|+||||+++|+|++|..||...+.......+.... ..++..+++++++++.+||..+|.+||+     ++++++|||
T Consensus       201 ~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~  279 (353)
T 2i0e_A          201 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF  279 (353)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGG
T ss_pred             cccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCcc
Confidence            9999999999999999999999888777777776654 3567789999999999999999999995     699999999


Q ss_pred             CCC
Q 041080          233 VKR  235 (247)
Q Consensus       233 ~~~  235 (247)
                      |+.
T Consensus       280 f~~  282 (353)
T 2i0e_A          280 FRY  282 (353)
T ss_dssp             GTT
T ss_pred             ccC
Confidence            975


No 46 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2.7e-47  Score=310.88  Aligned_cols=233  Identities=25%  Similarity=0.490  Sum_probs=196.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++.....  ........+.+|+.+++.++||||+++++++.+.+..++||||+.+++|..++... .+++..
T Consensus        39 ~~~~~AiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~  116 (384)
T 4fr4_A           39 TKKMYAMKYMNKQKC--VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET  116 (384)
T ss_dssp             TCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHH
T ss_pred             CCCEEEEEEEehhhc--ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHH
Confidence            478899999976431  12233567889999999999999999999999999999999999999999999775 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc-ccccCCCCCCccCCcccccC-CCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSK-NDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~-~~~~~~  157 (247)
                      ++.++.|++.||.|||+.||+|+||||+||+++.+|.++|+|||++...... ......|++.|+|||.+... ...++.
T Consensus       117 ~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~  196 (384)
T 4fr4_A          117 VKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSF  196 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCT
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCc
Confidence            9999999999999999999999999999999999999999999998755433 34456699999999998643 234788


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChh---hHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCC-hhhhhcCccC
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEG---VQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPT-VTELMEHPFV  233 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-~~~il~~p~~  233 (247)
                      ++|+||||+++|+|++|..||.....   ......+.. .....+..+++++.++|.+||+.+|.+||+ ++++++||||
T Consensus       197 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f  275 (384)
T 4fr4_A          197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET-TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM  275 (384)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGG
T ss_pred             cceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh-cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhh
Confidence            99999999999999999999974332   222333332 344667789999999999999999999998 8999999999


Q ss_pred             CCC
Q 041080          234 KRP  236 (247)
Q Consensus       234 ~~~  236 (247)
                      +..
T Consensus       276 ~~~  278 (384)
T 4fr4_A          276 NDI  278 (384)
T ss_dssp             TTC
T ss_pred             hcC
Confidence            863


No 47 
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=6.3e-48  Score=311.62  Aligned_cols=237  Identities=26%  Similarity=0.449  Sum_probs=195.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--------
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--------   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------   72 (247)
                      +|+.||+|++.............+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++..        
T Consensus        50 ~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~  129 (345)
T 3hko_A           50 TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK  129 (345)
T ss_dssp             TCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTE
T ss_pred             CCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccc
Confidence            477899999976543233345567899999999999999999999999999999999999999999998852        


Q ss_pred             ---------------------------------cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC--Ce
Q 041080           73 ---------------------------------YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG--SV  117 (247)
Q Consensus        73 ---------------------------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~--~~  117 (247)
                                                       ..+++..++.++.|++.||.+||+.|++|+||||+||+++.++  .+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~  209 (345)
T 3hko_A          130 CAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI  209 (345)
T ss_dssp             EEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCE
T ss_pred             cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceE
Confidence                                             1135778889999999999999999999999999999998776  89


Q ss_pred             EEcccccccccCcc------ccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhh
Q 041080          118 KLADFGLAKATTMN------DLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIG  191 (247)
Q Consensus       118 ~l~df~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~  191 (247)
                      +|+|||.+......      ......+++.|+|||.+.+....++.++||||||+++|+|++|..||......+....+.
T Consensus       210 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~  289 (345)
T 3hko_A          210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL  289 (345)
T ss_dssp             EECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             EEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence            99999998643221      123455899999999997655558999999999999999999999998888777776665


Q ss_pred             cCCCCCCC---CcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          192 KGELPSVP---SSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       192 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      ........   ..+++++.++|.+||+.+|.+|||+.++++||||+...
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          290 NKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             hcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            55432222   34799999999999999999999999999999999753


No 48 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.7e-47  Score=306.43  Aligned_cols=235  Identities=25%  Similarity=0.429  Sum_probs=191.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.....    ....+.+.+|+.+++.++||||+++++++.+++..++||||+++++|.++++.. .+++..
T Consensus        31 ~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  106 (323)
T 3tki_A           31 TEEAVAVKIVDMKRA----VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD  106 (323)
T ss_dssp             TCCEEEEEEEECC-----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHH
T ss_pred             CCcEEEEEEEEcccc----cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHH
Confidence            478999999975432    223456789999999999999999999999999999999999999999988765 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc----ccccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN----DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+......    ......|++.|+|||.+.+... .
T Consensus       107 ~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~  185 (323)
T 3tki_A          107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF-H  185 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSB-C
T ss_pred             HHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCC-C
Confidence            9999999999999999999999999999999999999999999998644322    2234568999999999865442 3


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHH--hhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccC
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFR--IGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFV  233 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~  233 (247)
                      +.++||||||+++|+|++|..||...........  ............+++.+.+++.+||..||.+|||++|+++||||
T Consensus       186 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~  265 (323)
T 3tki_A          186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY  265 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             CCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence            7789999999999999999999976554322222  22222222235789999999999999999999999999999999


Q ss_pred             CCCCCCC
Q 041080          234 KRPLQTP  240 (247)
Q Consensus       234 ~~~~~~~  240 (247)
                      +......
T Consensus       266 ~~~~~~~  272 (323)
T 3tki_A          266 NKPLKKG  272 (323)
T ss_dssp             TCCCCCC
T ss_pred             ccccccc
Confidence            9765443


No 49 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=2e-47  Score=319.28  Aligned_cols=234  Identities=29%  Similarity=0.469  Sum_probs=202.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.....  ......+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++.+. .+++..
T Consensus        40 ~g~~vAvK~i~~~~~--~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~  117 (476)
T 2y94_A           40 TGHKVAVKILNRQKI--RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKE  117 (476)
T ss_dssp             TCCEEEEEEEEHHHH--HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHH
T ss_pred             CCCEEEEEEEEhhhc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHH
Confidence            488999999975421  11223567889999999999999999999999999999999999999999998754 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCCCcc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....... .....|++.|+|||.+.+... .+.+
T Consensus       118 ~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~  196 (476)
T 2y94_A          118 SRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY-AGPE  196 (476)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCB-CSHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCC-CCCc
Confidence            99999999999999999999999999999999999999999999987654332 345568999999999975432 3789


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      +|+||+|+++|+|++|..||...........+..+.. ..+..+++++.+++.+||..||.+|||++++++||||+....
T Consensus       197 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          197 VDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF-YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC-CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             ceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc-CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            9999999999999999999998877777776665543 456778999999999999999999999999999999987544


No 50 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=9.3e-47  Score=298.19  Aligned_cols=231  Identities=29%  Similarity=0.465  Sum_probs=187.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||||++.....   .......+.+|+.++++++||||+++++++.+++..++||||+++ ++.+.+..  ..+++.
T Consensus        26 ~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~  101 (292)
T 3o0g_A           26 THEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPE  101 (292)
T ss_dssp             TCCEEEEEEEESSCS---STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHH
T ss_pred             CCceEEEEeeeccCC---cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHH
Confidence            478999999986542   334456788999999999999999999999999999999999987 55555543  459999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+......  ......+++.|+|||.+.+.. .++
T Consensus       102 ~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~  180 (292)
T 3o0g_A          102 IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK-LYS  180 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCS-CCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCC-CcC
Confidence            99999999999999999999999999999999999999999999998754422  233455789999999986543 268


Q ss_pred             cchhHHHHHHHHHHHHhCCCC-CCCChhhHHHHHhhcC----------------------------CCCCCCCcCCHHHH
Q 041080          157 LTADIWSLGCTVLEMLTRRPP-YSHLEGVQALFRIGKG----------------------------ELPSVPSSLSRDAR  207 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p-~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~  207 (247)
                      .++|+||+|+++++|++|..| |...+.......+...                            ........++++++
T Consensus       181 ~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (292)
T 3o0g_A          181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGR  260 (292)
T ss_dssp             THHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHH
T ss_pred             chHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHH
Confidence            999999999999999988777 4444444443332110                            01112235789999


Q ss_pred             HHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          208 DFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       208 ~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      +++.+||+.||.+|||++|+++||||+..
T Consensus       261 ~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          261 DLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHhccChhhCCCHHHHhcCcccccC
Confidence            99999999999999999999999999964


No 51 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.9e-47  Score=300.54  Aligned_cols=231  Identities=31%  Similarity=0.518  Sum_probs=188.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||+|++......   ....+.+.+|+.++++++||||+++++++...+..++||||+++ +|.+++..  .++++.
T Consensus        25 ~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~  100 (288)
T 1ob3_A           25 YGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESV  100 (288)
T ss_dssp             TSCEEEEEEECCSSGG---GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHH
T ss_pred             CCCEEEEEEEeccccc---cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHH
Confidence            4789999999764322   22235677999999999999999999999999999999999987 99998875  358999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+......  ......+++.|+|||.+.+.. .++
T Consensus       101 ~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~  179 (288)
T 1ob3_A          101 TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK-KYS  179 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCC-SCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCC-CCC
Confidence            99999999999999999999999999999999999999999999998654322  223445799999999986433 378


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC---C-------------------------CCCCCCcCCHHHHH
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG---E-------------------------LPSVPSSLSRDARD  208 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~---~-------------------------~~~~~~~~~~~~~~  208 (247)
                      .++|+||||+++|+|++|..||......+....+...   .                         .......+++++.+
T Consensus       180 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (288)
T 1ob3_A          180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID  259 (288)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHH
Confidence            9999999999999999999999887665554433210   0                         00112457899999


Q ss_pred             HHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          209 FILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       209 li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ++.+||..||.+|||++++++||||+..
T Consensus       260 li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          260 LLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             HHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            9999999999999999999999999864


No 52 
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2.6e-47  Score=300.19  Aligned_cols=233  Identities=29%  Similarity=0.487  Sum_probs=201.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++......  .......+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++... .+++..
T Consensus        38 ~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  115 (284)
T 2vgo_A           38 NKFIMALKVLFKSQLE--KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQR  115 (284)
T ss_dssp             TTEEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEEcccccc--hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHH
Confidence            4678999999754211  1223456889999999999999999999999999999999999999999988764 589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcch
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTA  159 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~  159 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+............++..|+|||.+.+..  ++.++
T Consensus       116 ~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~  193 (284)
T 2vgo_A          116 SATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKT--HDEKV  193 (284)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCC--BCTTH
T ss_pred             HHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCC--CCccc
Confidence            9999999999999999999999999999999999999999999998665554455566899999999996544  78899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          160 DIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       160 Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      |+||||++++++++|..||...........+.... ...+..++.++++++.+||..+|.+|||++++++||||+....
T Consensus       194 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVD-LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             chhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccc-cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            99999999999999999998877776666655543 3566789999999999999999999999999999999987543


No 53 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=4.2e-47  Score=309.51  Aligned_cols=228  Identities=26%  Similarity=0.427  Sum_probs=196.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||+|++....     ....+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++...  .+++.
T Consensus       113 ~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~  187 (373)
T 2x4f_A          113 TGLKLAAKIIKTRG-----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL  187 (373)
T ss_dssp             TCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHH
T ss_pred             CCcEEEEEEEcccc-----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHH
Confidence            47899999997532     344567889999999999999999999999999999999999999999888654  49999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE--cCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILV--DASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~--~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||+.||+|+||||+||++  +.++.++|+|||++....... .....|++.|+|||.+.+..  +
T Consensus       188 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~  265 (373)
T 2x4f_A          188 DTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDF--V  265 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCB--C
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCC--C
Confidence            999999999999999999999999999999999  566789999999987654333 33445899999999986544  7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC---CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS---VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++||||||+++|+|++|..||...........+.......   ....++++++++|.+||+.+|.+|||++++++|||
T Consensus       266 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~  345 (373)
T 2x4f_A          266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPW  345 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             CcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcC
Confidence            889999999999999999999998887777766665543322   22568999999999999999999999999999999


Q ss_pred             CCC
Q 041080          233 VKR  235 (247)
Q Consensus       233 ~~~  235 (247)
                      |+.
T Consensus       346 ~~~  348 (373)
T 2x4f_A          346 LSD  348 (373)
T ss_dssp             HHC
T ss_pred             cCC
Confidence            985


No 54 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2e-46  Score=295.07  Aligned_cols=231  Identities=28%  Similarity=0.474  Sum_probs=198.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++....   ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+.+... .+++..
T Consensus        30 ~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~  106 (284)
T 3kk8_A           30 TGLEFAAKIINTKK---LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD  106 (284)
T ss_dssp             TCCEEEEEEEEGGG---CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHH
T ss_pred             CCceEEEEEeeccc---CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHH
Confidence            47899999997653   23455677889999999999999999999999999999999999999998877554 589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC---eEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS---VKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~---~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.   ++|+|||.+....... .....+++.|+|||.+.+..  +
T Consensus       107 ~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  184 (284)
T 3kk8_A          107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP--Y  184 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCC--B
T ss_pred             HHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCC--C
Confidence            9999999999999999999999999999999987665   9999999986554333 23456899999999996544  7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC---CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP---SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++|+||||+++++|++|..||...........+......   .....+++++.+++.+||+.+|.+|||++++++|||
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  264 (284)
T 3kk8_A          185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW  264 (284)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred             CcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence            89999999999999999999999888777777666554432   222578999999999999999999999999999999


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      |+..
T Consensus       265 ~~~~  268 (284)
T 3kk8_A          265 ICNR  268 (284)
T ss_dssp             HHSC
T ss_pred             ccCC
Confidence            9874


No 55 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=2.6e-47  Score=317.94  Aligned_cols=231  Identities=27%  Similarity=0.468  Sum_probs=191.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.....  ........+.+|+.+++.++||||+++++++...+..++||||+++++|.+++.+. .+++..
T Consensus       172 ~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  249 (446)
T 4ejn_A          172 TGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDR  249 (446)
T ss_dssp             TCCEEEEEEEEHHHH--C-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHH
T ss_pred             CCCEEEEEEEEhhhh--hhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHH
Confidence            478999999975421  12334556778999999999999999999999999999999999999999988654 589999


Q ss_pred             HHHHHHHHHHHHHHhhh-CCeeecCCCCCcEEEcCCCCeEEcccccccccCc--cccccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHE-RNVVHRDIKCANILVDASGSVKLADFGLAKATTM--NDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~-~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      +..++.|++.||.|||+ .||+|+||||+||+++.++.++|+|||++.....  .......|++.|+|||.+.+..  ++
T Consensus       250 ~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~  327 (446)
T 4ejn_A          250 ARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND--YG  327 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSC--CC
T ss_pred             HHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCC--CC
Confidence            99999999999999998 9999999999999999999999999999865322  2234566899999999996554  79


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC-----ChhhhhcCc
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRP-----TVTELMEHP  231 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~il~~p  231 (247)
                      .++||||||+++|+|++|..||...........+..... .++..+++++.++|.+||..||.+||     +++++++||
T Consensus       328 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp  406 (446)
T 4ejn_A          328 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR  406 (446)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred             CccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC-CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence            999999999999999999999988887777766665543 56778999999999999999999999     999999999


Q ss_pred             cCCCC
Q 041080          232 FVKRP  236 (247)
Q Consensus       232 ~~~~~  236 (247)
                      ||+..
T Consensus       407 ~f~~~  411 (446)
T 4ejn_A          407 FFAGI  411 (446)
T ss_dssp             GGTTC
T ss_pred             cccCC
Confidence            99864


No 56 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=5.3e-47  Score=302.93  Aligned_cols=231  Identities=31%  Similarity=0.523  Sum_probs=191.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-------
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-------   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-------   73 (247)
                      +|+.||||++.....    ....+.+.+|+.++++++||||+++++++..++..++||||+++ +|.+++...       
T Consensus        29 ~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~  103 (317)
T 2pmi_A           29 TGVYVALKEVKLDSE----EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPR  103 (317)
T ss_dssp             SCCEEEEEEEECCST----TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCC
T ss_pred             CCcEEEEEEeecccc----cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecCC-CHHHHHHhcccccccc
Confidence            478999999976432    12234577999999999999999999999999999999999985 999988653       


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccC
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~  151 (247)
                      .+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||.+......  ......+++.|+|||.+.+.
T Consensus       104 ~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  183 (317)
T 2pmi_A          104 GLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS  183 (317)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCC
Confidence            4899999999999999999999999999999999999999999999999998754422  23345689999999998653


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC---C----------C--------------------CCC
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG---E----------L--------------------PSV  198 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~---~----------~--------------------~~~  198 (247)
                      . .++.++||||||+++|+|++|..||...........+...   .          .                    +..
T Consensus       184 ~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (317)
T 2pmi_A          184 R-TYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT  262 (317)
T ss_dssp             C-CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGC
T ss_pred             C-CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccc
Confidence            2 3789999999999999999999999887766555443210   0          0                    011


Q ss_pred             CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          199 PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       199 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      +..+++++.++|.+||+.||.+|||++++++||||+...
T Consensus       263 ~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             cccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence            235788999999999999999999999999999999753


No 57 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=1.4e-46  Score=301.03  Aligned_cols=234  Identities=31%  Similarity=0.481  Sum_probs=199.6

Q ss_pred             CCceEEEEEEeecCCCc-cchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGA-QGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||+|++....... ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++... .+++.
T Consensus        36 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  115 (321)
T 2a2a_A           36 TGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE  115 (321)
T ss_dssp             TCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHH
T ss_pred             CCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHH
Confidence            47899999998754322 22224667889999999999999999999999999999999999999999999765 48999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC----CeEEcccccccccCccc-cccCCCCCCccCCcccccCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG----SVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~----~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++    .++|+|||.+....... .....+++.|+|||.+.+.. 
T Consensus       116 ~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-  194 (321)
T 2a2a_A          116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEP-  194 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCC-
Confidence            9999999999999999999999999999999999888    79999999987554332 33455899999999996544 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC---CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS---VPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                       ++.++|+||||+++|+|++|..||......+....+.......   ....+++.+.+++.+||..+|.+|||++++++|
T Consensus       195 -~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          195 -LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             -CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             7899999999999999999999998877777766665543322   125689999999999999999999999999999


Q ss_pred             ccCCCC
Q 041080          231 PFVKRP  236 (247)
Q Consensus       231 p~~~~~  236 (247)
                      |||+..
T Consensus       274 p~~~~~  279 (321)
T 2a2a_A          274 PWITPV  279 (321)
T ss_dssp             TTTSCS
T ss_pred             ccccCC
Confidence            999864


No 58 
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.6e-46  Score=298.49  Aligned_cols=231  Identities=29%  Similarity=0.493  Sum_probs=196.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++....     ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++... .+++..
T Consensus        33 ~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  107 (304)
T 2jam_A           33 TGKLFALKCIKKSP-----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKD  107 (304)
T ss_dssp             TCCEEEEEEEECC-----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHH
T ss_pred             CCCEEEEEEEeccc-----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHH
Confidence            48899999997532     122346789999999999999999999999999999999999999999988654 589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE---cCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILV---DASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||++   +.++.++|+|||.+............+++.|+|||.+.+..  ++
T Consensus       108 ~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  185 (304)
T 2jam_A          108 ASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKP--YS  185 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCS--CC
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCC--CC
Confidence            99999999999999999999999999999999   77889999999998765544444445899999999996544  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC---CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccC
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL---PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFV  233 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~  233 (247)
                      .++|+||||+++|+|++|..||...........+.....   ......+++++.+++.+||..+|.+|||++++++||||
T Consensus       186 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~  265 (304)
T 2jam_A          186 KAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI  265 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence            999999999999999999999988777776666655433   23345789999999999999999999999999999999


Q ss_pred             CCCCC
Q 041080          234 KRPLQ  238 (247)
Q Consensus       234 ~~~~~  238 (247)
                      +....
T Consensus       266 ~~~~~  270 (304)
T 2jam_A          266 DGNTA  270 (304)
T ss_dssp             HSSCS
T ss_pred             cCCCc
Confidence            87543


No 59 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.9e-46  Score=295.46  Aligned_cols=228  Identities=27%  Similarity=0.471  Sum_probs=188.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-----cCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-----YHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~   75 (247)
                      +|+.+|+|++.....    ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+.+..     ..+
T Consensus        46 ~~~~~aiK~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  121 (285)
T 3is5_A           46 SGLERVIKTINKDRS----QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL  121 (285)
T ss_dssp             TCCEEEEEEEEGGGC----CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCC
T ss_pred             CCceEEEEEeecccc----chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCC
Confidence            478899999976432    22356788999999999999999999999999999999999999999988743     359


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE---cCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILV---DASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~---~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~  151 (247)
                      ++..++.++.|++.||.+||+.|++|+||||+||++   +.++.++|+|||.+....... .....+++.|+|||.+.+ 
T Consensus       122 ~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-  200 (285)
T 3is5_A          122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-  200 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHTT-
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhcc-
Confidence            999999999999999999999999999999999999   456789999999987544332 334558899999999853 


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC--CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL--PSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                        .++.++|+||||+++++|++|..||.................  ......+++++.+++.+||+.||.+|||++|+++
T Consensus       201 --~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          201 --DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             --CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              378899999999999999999999988777666655444332  2223457999999999999999999999999999


Q ss_pred             CccCCC
Q 041080          230 HPFVKR  235 (247)
Q Consensus       230 ~p~~~~  235 (247)
                      ||||++
T Consensus       279 hp~f~~  284 (285)
T 3is5_A          279 HEWFKQ  284 (285)
T ss_dssp             SGGGGC
T ss_pred             CHHhhc
Confidence            999986


No 60 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=9.3e-47  Score=295.97  Aligned_cols=230  Identities=27%  Similarity=0.476  Sum_probs=197.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      ++..+|+|.+.....     ...+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++... .+++..
T Consensus        33 ~~~~~a~k~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  107 (277)
T 3f3z_A           33 TRIRRAAKKIPKYFV-----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD  107 (277)
T ss_dssp             TCCEEEEEEEEGGGC-----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHH
T ss_pred             CCcEEEEEeehhhcc-----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHH
Confidence            367899999975432     22456889999999999999999999999999999999999999998887654 589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE---cCCCCeEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILV---DASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~---~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.+||++|++|+||||+||++   +.++.++|+|||.+...... ......+++.|+|||.+.+.   +
T Consensus       108 ~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~  184 (277)
T 3f3z_A          108 AARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL---Y  184 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC---B
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc---C
Confidence            99999999999999999999999999999999   78889999999998654433 23445689999999998543   7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCC---CcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVP---SSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++|+||||+++++|++|..||...........+.........   ..+++.+.+++.+||+.+|.+|||+.++++|||
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~  264 (277)
T 3f3z_A          185 GPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW  264 (277)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred             CchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence            88999999999999999999999988877777776665443222   268999999999999999999999999999999


Q ss_pred             CCCCCC
Q 041080          233 VKRPLQ  238 (247)
Q Consensus       233 ~~~~~~  238 (247)
                      |+..+.
T Consensus       265 ~~~~~~  270 (277)
T 3f3z_A          265 FEKQLS  270 (277)
T ss_dssp             HHHHHC
T ss_pred             Hhcccc
Confidence            987543


No 61 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.2e-46  Score=300.04  Aligned_cols=233  Identities=27%  Similarity=0.469  Sum_probs=189.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++... .+++..
T Consensus        27 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~  103 (311)
T 4agu_A           27 TGQIVAIKKFLESE---DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL  103 (311)
T ss_dssp             TCCEEEEEEECCCC---C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHH
T ss_pred             CCcEEEEEEeeccc---cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHH
Confidence            48899999986542   33445677889999999999999999999999999999999999999999888754 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......  .....++..|+|||.+.+.. .++.
T Consensus       104 ~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~  182 (311)
T 4agu_A          104 VKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT-QYGP  182 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCS-CCCT
T ss_pred             HHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCC-CCCc
Confidence            99999999999999999999999999999999999999999999986544222  23455888999999986533 3789


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC---------------------CCCCC---------CCcCCHHHH
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG---------------------ELPSV---------PSSLSRDAR  207 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~---------------------~~~~~---------~~~~~~~~~  207 (247)
                      ++|+||+|++++++++|..||......+....+...                     ..+..         ...+++++.
T Consensus       183 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (311)
T 4agu_A          183 PVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPAL  262 (311)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHH
T ss_pred             chhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHH
Confidence            999999999999999999999887665554332210                     00000         135788999


Q ss_pred             HHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          208 DFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       208 ~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      +++.+||..||.+|||++++++||||+...
T Consensus       263 ~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          263 GLLKGCLHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             HHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence            999999999999999999999999999764


No 62 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=9.7e-47  Score=306.92  Aligned_cols=231  Identities=28%  Similarity=0.428  Sum_probs=190.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHH-HhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISL-LSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++.+....  .......+.+|..+ ++.++||||+++++++.+.+..++||||++||+|.+++.+. .+++.
T Consensus        62 ~~~~~AiK~~~~~~~~--~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~  139 (373)
T 2r5t_A           62 EEVFYAVKVLQKKAIL--KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP  139 (373)
T ss_dssp             TCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHH
T ss_pred             CCCEEEEEEEEHHHhh--hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHH
Confidence            4788999999875432  22334456667766 46689999999999999999999999999999999988764 59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccC--ccccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATT--MNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.|||++||+|+||||+||+++.+|.++|+|||++....  ........|++.|+|||.+.+..  ++
T Consensus       140 ~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~  217 (373)
T 2r5t_A          140 RARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP--YD  217 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCC--CC
T ss_pred             HHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCC--CC
Confidence            999999999999999999999999999999999999999999999986532  22344566999999999996544  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh----hhhhcCcc
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV----TELMEHPF  232 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~----~~il~~p~  232 (247)
                      .++|+||||+++|+|++|..||...+.......+..... .++..++.+++++|.+||+.||.+||++    +++++|||
T Consensus       218 ~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~  296 (373)
T 2r5t_A          218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF  296 (373)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC-CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred             chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc-CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence            999999999999999999999998888777777766543 5667899999999999999999999987    68999999


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      |+.+
T Consensus       297 f~~~  300 (373)
T 2r5t_A          297 FSLI  300 (373)
T ss_dssp             GTTC
T ss_pred             ccCC
Confidence            9863


No 63 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-46  Score=304.91  Aligned_cols=231  Identities=26%  Similarity=0.449  Sum_probs=194.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC------cEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN------RLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++...+      .+++||||+ +++|.++++...
T Consensus        49 ~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~  124 (367)
T 1cm8_A           49 TGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK  124 (367)
T ss_dssp             TCCEEEEEECSSTT---SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCC
T ss_pred             CCCEEEEEEeCccc---cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcCC
Confidence            48899999986542   33455677889999999999999999999987653      469999999 779999999888


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..... ......++.+|+|||.+.+.. .
T Consensus       125 l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~-~~~~~~~t~~y~aPE~~~~~~-~  202 (367)
T 1cm8_A          125 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS-EMTGYVVTRWYRAPEVILNWM-R  202 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS-SCCSSCSCGGGCCTHHHHTTT-C
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccccc-ccCcCcCCCCcCCHHHHhCCC-C
Confidence            99999999999999999999999999999999999999999999999999876543 234556899999999986532 3


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc------------------------------CCCCCCCCcCCH
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK------------------------------GELPSVPSSLSR  204 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~  204 (247)
                      ++.++|+||+|+++++|++|+.||...+.......+..                              ..........++
T Consensus       203 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (367)
T 1cm8_A          203 YTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASP  282 (367)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCH
T ss_pred             CChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCH
Confidence            78999999999999999999999987765554433221                              011123356789


Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      .+.+++.+||..||.+|||++++++||||+...
T Consensus       283 ~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          283 LAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            999999999999999999999999999999754


No 64 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.3e-46  Score=299.55  Aligned_cols=233  Identities=30%  Similarity=0.513  Sum_probs=187.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc---CCCceeeeceeeecCC-----cEEEEEeccccCcHHHHHHh
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF---EQDNIVQYLGTDKDEN-----RLYIFLELVTKGSLANLYQK   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~   72 (247)
                      +|+.||||++...............+.+|+.+++.+   +||||+++++++....     ..+++|||+.+ +|.+++..
T Consensus        33 ~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~  111 (308)
T 3g33_A           33 SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK  111 (308)
T ss_dssp             TCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHT
T ss_pred             CCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhh
Confidence            478999999986543322222233455777777666   4999999999987765     58999999975 99999877


Q ss_pred             cC---CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCccc
Q 041080           73 YH---LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVV  148 (247)
Q Consensus        73 ~~---~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~  148 (247)
                      ..   +++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+....... .....+++.|+|||.+
T Consensus       112 ~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~  191 (308)
T 3g33_A          112 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVL  191 (308)
T ss_dssp             CCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHH
Confidence            54   8999999999999999999999999999999999999999999999999987554332 3345689999999999


Q ss_pred             ccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC----CC----------------------CCCCcC
Q 041080          149 NSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE----LP----------------------SVPSSL  202 (247)
Q Consensus       149 ~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~----~~----------------------~~~~~~  202 (247)
                      .+..  ++.++||||||+++|+|++|..||...........+....    ..                      .....+
T Consensus       192 ~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (308)
T 3g33_A          192 LQST--YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEM  269 (308)
T ss_dssp             HTSC--CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSC
T ss_pred             cCCC--CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccc
Confidence            6554  7899999999999999999999998877766655443210    00                      011357


Q ss_pred             CHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          203 SRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       203 ~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ++++.++|.+||+.||.+|||++++++||||+..
T Consensus       270 ~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          270 EESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             cHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            8999999999999999999999999999999975


No 65 
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.4e-46  Score=298.57  Aligned_cols=231  Identities=38%  Similarity=0.678  Sum_probs=204.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      +|+.||||++.....    ....+.+.+|+.++++++||||+++++++...+..++||||+++++|.++++...+++..+
T Consensus        46 ~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  121 (303)
T 3a7i_A           46 TQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI  121 (303)
T ss_dssp             TCCEEEEEEEETTTC----STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTSCCCHHHH
T ss_pred             CCcEEEEEEeccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHH
Confidence            478999999976432    2345678899999999999999999999999999999999999999999998888999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCCCCCcc
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      +.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......  .....+++.|+|||.+.+..  ++.+
T Consensus       122 ~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~  199 (303)
T 3a7i_A          122 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA--YDSK  199 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCC--BCTH
T ss_pred             HHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCC--CCch
Confidence            9999999999999999999999999999999999999999999986544332  23455889999999996544  7889


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      +|+||||+++++|++|..||...........+.....+..+..++..+.+++.+||..+|.+|||++++++||||....
T Consensus       200 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  278 (303)
T 3a7i_A          200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA  278 (303)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHC
T ss_pred             hhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCC
Confidence            9999999999999999999988877777766666666777888999999999999999999999999999999997653


No 66 
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=2.7e-46  Score=304.13  Aligned_cols=235  Identities=29%  Similarity=0.524  Sum_probs=198.3

Q ss_pred             CCceEEEEEEeecCCC---ccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CC
Q 041080            1 DGFFFAVKEVSLQDQG---AQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~---~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~   75 (247)
                      +|+.||||++......   .......+.+.+|+.+++++ +||||+++++++...+..++||||+++++|.+++... .+
T Consensus       118 ~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l  197 (365)
T 2y7j_A          118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVAL  197 (365)
T ss_dssp             TCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSC
T ss_pred             CCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCC
Confidence            5889999999765321   11233356788999999999 7999999999999999999999999999999998764 59


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc-ccccCCCCCCccCCcccccC---
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSK---  151 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~---  151 (247)
                      ++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||++...... ......|++.|+|||.+.+.   
T Consensus       198 ~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  277 (365)
T 2y7j_A          198 SEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDE  277 (365)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCT
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccc
Confidence            99999999999999999999999999999999999999999999999988654433 23445689999999998543   


Q ss_pred             -CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhh
Q 041080          152 -NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTEL  227 (247)
Q Consensus       152 -~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~i  227 (247)
                       ...++.++|+||||+++|+|++|..||...........+........   ....+..+.+++.+||..+|.+|||++++
T Consensus       278 ~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el  357 (365)
T 2y7j_A          278 THPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA  357 (365)
T ss_dssp             TSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             cCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence             22368899999999999999999999988777666666555443222   14678999999999999999999999999


Q ss_pred             hcCccCCC
Q 041080          228 MEHPFVKR  235 (247)
Q Consensus       228 l~~p~~~~  235 (247)
                      ++||||++
T Consensus       358 l~hp~f~r  365 (365)
T 2y7j_A          358 LQHPFFER  365 (365)
T ss_dssp             HHSGGGCC
T ss_pred             hcCcccCC
Confidence            99999974


No 67 
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=7.8e-46  Score=293.13  Aligned_cols=235  Identities=31%  Similarity=0.522  Sum_probs=202.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++.....  ......+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.++++.. .+++..
T Consensus        39 ~~~~~a~K~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  116 (294)
T 2rku_A           39 TKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE  116 (294)
T ss_dssp             TCCEEEEEEEEGGGC--CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHH
T ss_pred             CCceEEEEEechhhc--cCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHH
Confidence            377899999976432  23455677889999999999999999999999999999999999999999988764 589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......  ......++..|+|||.+.+..  ++.
T Consensus       117 ~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~  194 (294)
T 2rku_A          117 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG--HSF  194 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSC--BCT
T ss_pred             HHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCC--CCc
Confidence            9999999999999999999999999999999999999999999998654322  233455889999999986544  788


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      ++|+||||+++++|++|..||......+....+.... ...+..+++.+.+++.+||+.+|.+|||++++++||||+...
T Consensus       195 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          195 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE-YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhcc-CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence            9999999999999999999998877766666555443 356678899999999999999999999999999999999865


Q ss_pred             CCC
Q 041080          238 QTP  240 (247)
Q Consensus       238 ~~~  240 (247)
                      ...
T Consensus       274 ~~~  276 (294)
T 2rku_A          274 IPA  276 (294)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            443


No 68 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.2e-46  Score=308.82  Aligned_cols=231  Identities=29%  Similarity=0.455  Sum_probs=189.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeecCC--cEEEEEeccccCcHHHHHHhcCCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDEN--RLYIFLELVTKGSLANLYQKYHLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~   77 (247)
                      +|+.||||++....   ........+.+|+.+++++. ||||+++++++...+  ..++||||+.+ +|.+++....+++
T Consensus        33 ~~~~vaiK~i~~~~---~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~  108 (388)
T 3oz6_A           33 TGEVVAVKKIFDAF---QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEP  108 (388)
T ss_dssp             TCCEEEEEEECC-----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHHHHHTCCCH
T ss_pred             CCCEEEEEEecccc---cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHHHHcCCCCH
Confidence            47899999986432   33455677889999999997 999999999987544  78999999985 9999998888999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc-----------------------cccc
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM-----------------------NDLK  134 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~-----------------------~~~~  134 (247)
                      ..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++.....                       ....
T Consensus       109 ~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (388)
T 3oz6_A          109 VHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT  188 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC--------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999864321                       1123


Q ss_pred             cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC-CC-----------------
Q 041080          135 SCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE-LP-----------------  196 (247)
Q Consensus       135 ~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~-~~-----------------  196 (247)
                      ...|+++|+|||.+.+.. .++.++||||+||++++|++|..||...+.......+.... .+                 
T Consensus       189 ~~~gt~~y~aPE~~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~  267 (388)
T 3oz6_A          189 DYVATRWYRAPEILLGST-KYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMI  267 (388)
T ss_dssp             -CCCGGGGCCHHHHTTCC-CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHH
T ss_pred             CCcccCCcCCHHHhcCCC-CCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHH
Confidence            356899999999986532 37999999999999999999999998877665554432100 00                 


Q ss_pred             ----------------------------CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          197 ----------------------------SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       197 ----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                                                  ......++++.+||.+||..||.+|||++++++||||+..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          268 ESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             HHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             HhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence                                        0112678999999999999999999999999999998764


No 69 
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=7.1e-47  Score=296.77  Aligned_cols=232  Identities=28%  Similarity=0.566  Sum_probs=174.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||||++.....  ......+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++...  .+++.
T Consensus        35 ~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  112 (278)
T 3cok_A           35 TGLEVAIKMIDKKAM--YKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN  112 (278)
T ss_dssp             TCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHH
T ss_pred             CCceEEEEEeehhhh--hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHH
Confidence            478999999975321  11223567889999999999999999999999999999999999999999999864  48999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......  ......+++.|+|||.+.+..  ++
T Consensus       113 ~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  190 (278)
T 3cok_A          113 EARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA--HG  190 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCC--CC
Confidence            99999999999999999999999999999999999999999999998654422  223345889999999986544  68


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      .++|+||||++++++++|..||...........+.... ...+..++.++.+++.+||..+|.+|||++++++||||+..
T Consensus       191 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          191 LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLAD-YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             -CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcc-cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            89999999999999999999998766555544443332 24566789999999999999999999999999999999875


Q ss_pred             C
Q 041080          237 L  237 (247)
Q Consensus       237 ~  237 (247)
                      -
T Consensus       270 ~  270 (278)
T 3cok_A          270 S  270 (278)
T ss_dssp             -
T ss_pred             C
Confidence            4


No 70 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=3.4e-46  Score=299.11  Aligned_cols=227  Identities=29%  Similarity=0.474  Sum_probs=173.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++...        ....+.+|+.+++.+. ||||+++++++.+.+..++||||+++++|.+++.+. .+++.
T Consensus        35 ~~~~vavK~~~~~--------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  106 (325)
T 3kn6_A           35 SNQAFAVKIISKR--------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET  106 (325)
T ss_dssp             TCCEEEEEEEEGG--------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHH
T ss_pred             CCCEEEEEEEChh--------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHH
Confidence            4789999999642        2345678999999997 999999999999999999999999999999998775 49999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC---CeEEcccccccccCcc--ccccCCCCCCccCCcccccCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG---SVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~---~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      .++.++.|++.||.|||++|++|+||||+||+++.++   .++|+|||.+......  ......+++.|+|||.+.+.. 
T Consensus       107 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-  185 (325)
T 3kn6_A          107 EASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNG-  185 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CC-
T ss_pred             HHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCC-
Confidence            9999999999999999999999999999999998766   7999999998654332  233455789999999996544 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChh-------hHHHHHhhcCCCCCCC---CcCCHHHHHHHHHHhcCCCCCCCC
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEG-------VQALFRIGKGELPSVP---SSLSRDARDFILKCLQVNPNDRPT  223 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps  223 (247)
                       ++.++|+||||+++|+|++|..||.....       ......+..+......   ..++++++++|.+||..||.+|||
T Consensus       186 -~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  264 (325)
T 3kn6_A          186 -YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK  264 (325)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCC
T ss_pred             -CCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCC
Confidence             78999999999999999999999976443       3344444444332221   357999999999999999999999


Q ss_pred             hhhhhcCccCCCCC
Q 041080          224 VTELMEHPFVKRPL  237 (247)
Q Consensus       224 ~~~il~~p~~~~~~  237 (247)
                      ++++++||||+...
T Consensus       265 ~~ell~h~w~~~~~  278 (325)
T 3kn6_A          265 MSGLRYNEWLQDGS  278 (325)
T ss_dssp             TTTSTTCGGGCTTC
T ss_pred             HHHHhcChhhccCc
Confidence            99999999998753


No 71 
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=4.7e-46  Score=293.82  Aligned_cols=230  Identities=29%  Similarity=0.514  Sum_probs=193.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec----CCcEEEEEeccccCcHHHHHHh-cCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD----ENRLYIFLELVTKGSLANLYQK-YHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~-~~~   75 (247)
                      +|..||+|.+.....   .....+.+.+|+.++++++||||+++++++..    ....++||||+++++|.+++.. ..+
T Consensus        50 ~~~~va~k~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  126 (290)
T 1t4h_A           50 TTVEVAWCELQDRKL---TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVM  126 (290)
T ss_dssp             TCCEEEEEEEEGGGS---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSC
T ss_pred             CceEEEEEEecchhh---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCC
Confidence            467899999976432   34557788999999999999999999998764    4568999999999999999977 459


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCcEEEc-CCCCeEEcccccccccCccccccCCCCCCccCCcccccCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERN--VVHRDIKCANILVD-ASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~~~ni~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  152 (247)
                      ++..++.++.|++.||.+||+.|  ++|+||||+||+++ .++.++|+|||.+............+++.|+|||.+.+  
T Consensus       127 ~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~--  204 (290)
T 1t4h_A          127 KIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE--  204 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT--
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc--
Confidence            99999999999999999999999  99999999999998 78899999999997666555566678999999998853  


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHH-HHhhcCC-CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQAL-FRIGKGE-LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                       .++.++|+||||+++++|++|..||......... ..+.... ....+...++++.+++.+||..+|.+|||++++++|
T Consensus       205 -~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          205 -KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence             2788999999999999999999999875544443 3333332 223455678999999999999999999999999999


Q ss_pred             ccCCCC
Q 041080          231 PFVKRP  236 (247)
Q Consensus       231 p~~~~~  236 (247)
                      |||++.
T Consensus       284 ~~f~~~  289 (290)
T 1t4h_A          284 AFFQEE  289 (290)
T ss_dssp             GGGC--
T ss_pred             cccccC
Confidence            999864


No 72 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-46  Score=306.62  Aligned_cols=230  Identities=29%  Similarity=0.496  Sum_probs=196.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||+|++....     ......+.+|+.++++++||||+++++++.+.+..++||||+.+++|.+++...  .+++.
T Consensus        75 ~~~~~a~K~~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~  149 (387)
T 1kob_A           75 TGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA  149 (387)
T ss_dssp             TCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHH
T ss_pred             CCCEEEEEEecccc-----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHH
Confidence            47889999997532     334557889999999999999999999999999999999999999999988654  58999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC--CCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA--SGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~--~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||+.|++|+||||+||+++.  ++.++|+|||++....... .....+++.|+|||.+.+..  +
T Consensus       150 ~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~  227 (387)
T 1kob_A          150 EVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREP--V  227 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCC--B
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCC--C
Confidence            99999999999999999999999999999999974  4679999999987654332 23345899999999996544  7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC---CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL---PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++||||||+++|+|++|..||...........+.....   +.....++++++++|.+||..||.+|||++++++|||
T Consensus       228 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~  307 (387)
T 1kob_A          228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW  307 (387)
T ss_dssp             CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred             CCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCcc
Confidence            8999999999999999999999988777666666555432   2233578999999999999999999999999999999


Q ss_pred             CCCCC
Q 041080          233 VKRPL  237 (247)
Q Consensus       233 ~~~~~  237 (247)
                      |+...
T Consensus       308 ~~~~~  312 (387)
T 1kob_A          308 LKGDH  312 (387)
T ss_dssp             TSSCC
T ss_pred             ccCCc
Confidence            98753


No 73 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=3.8e-46  Score=302.80  Aligned_cols=231  Identities=26%  Similarity=0.401  Sum_probs=180.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||||++.....      ..+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++.. ..+++..
T Consensus        44 ~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  117 (361)
T 3uc3_A           44 TKELVAVKYIERGAA------IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDE  117 (361)
T ss_dssp             TCCEEEEEEEESSTT------SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEEecCcc------ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHH
Confidence            478999999975432      124577999999999999999999999999999999999999999998865 4599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC--eEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS--VKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~--~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.|||++|++|+||||+||+++.++.  ++|+|||.+...... ......|++.|+|||.+.+... .+
T Consensus       118 ~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~  196 (361)
T 3uc3_A          118 ARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY-DG  196 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSC-CH
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCC-CC
Confidence            9999999999999999999999999999999987765  999999998643322 2344568999999999865542 24


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhh----HHHHHhhcCCC-CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCc
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGV----QALFRIGKGEL-PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p  231 (247)
                      .++||||||+++|+|++|..||......    .....+..... ......++++++++|.+||..+|.+|||++++++||
T Consensus       197 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp  276 (361)
T 3uc3_A          197 KIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHS  276 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred             CeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence            4599999999999999999999765432    22233332222 122336899999999999999999999999999999


Q ss_pred             cCCCCCC
Q 041080          232 FVKRPLQ  238 (247)
Q Consensus       232 ~~~~~~~  238 (247)
                      ||...+.
T Consensus       277 ~f~~~~~  283 (361)
T 3uc3_A          277 WFLKNLP  283 (361)
T ss_dssp             HHHTTCC
T ss_pred             chhcCCc
Confidence            9976543


No 74 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=3.6e-46  Score=301.47  Aligned_cols=232  Identities=34%  Similarity=0.615  Sum_probs=197.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||||++.....  ......+.+.+|+.++++++||||+++++++..++..++||||+.| +|.+++..  ..+++.
T Consensus        78 ~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~  154 (348)
T 1u5q_A           78 NSEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEV  154 (348)
T ss_dssp             TTEEEEEEEEESCSS--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHH
T ss_pred             CCeEEEEEEEccccc--cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHH
Confidence            478999999976432  3345567789999999999999999999999999999999999985 78777753  459999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCccccc-CCCCCCc
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNS-KNDGYGL  157 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~  157 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.....  .....|++.|+|||.+.+ ....++.
T Consensus       155 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~  232 (348)
T 1u5q_A          155 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--ANSFVGTPYWMAPEVILAMDEGQYDG  232 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--BCCCCSCGGGCCHHHHHTTSSCCBCT
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC--CCcccCCcceeCHhhhccccCCCCCc
Confidence            9999999999999999999999999999999999999999999999876543  234568999999999853 2334788


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC-CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS-VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ++||||||+++++|++|..||...........+.....+. .+..+++.++++|.+||+.+|.+|||++++++||||...
T Consensus       233 ~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence            9999999999999999999998877666655554444333 356789999999999999999999999999999999865


Q ss_pred             C
Q 041080          237 L  237 (247)
Q Consensus       237 ~  237 (247)
                      .
T Consensus       313 ~  313 (348)
T 1u5q_A          313 R  313 (348)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 75 
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=6.1e-46  Score=292.56  Aligned_cols=228  Identities=23%  Similarity=0.371  Sum_probs=190.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-----cC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-----YH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~   74 (247)
                      +|+.||||++.....   .......+.+|+..+..+ +||||+++++++.+.+..++||||+++++|.+++..     ..
T Consensus        35 ~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  111 (289)
T 1x8b_A           35 DGCIYAIKRSKKPLA---GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY  111 (289)
T ss_dssp             TCCEEEEEEEECCCT---TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCC
T ss_pred             CCceEEEEEeccccc---ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccC
Confidence            488999999986532   233456778999999999 899999999999999999999999999999999876     34


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC-------------------CCeEEcccccccccCcccccc
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS-------------------GSVKLADFGLAKATTMNDLKS  135 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~-------------------~~~~l~df~~~~~~~~~~~~~  135 (247)
                      +++..++.++.|++.||.+||++|++|+||||+||+++.+                   ..++|+|||.+.......  .
T Consensus       112 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~  189 (289)
T 1x8b_A          112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ--V  189 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC--C
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc--c
Confidence            8999999999999999999999999999999999999844                   479999999987654332  3


Q ss_pred             CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhc
Q 041080          136 CKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQ  215 (247)
Q Consensus       136 ~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  215 (247)
                      ..++..|+|||.+.+.. .++.++||||||++++++++|..++....   ....+.....+..+..+++++.+++.+||.
T Consensus       190 ~~gt~~y~aPE~~~~~~-~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  265 (289)
T 1x8b_A          190 EEGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIH  265 (289)
T ss_dssp             CCCCGGGCCHHHHTTCC-TTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTC
T ss_pred             cCCCccccChhHhcCCC-CCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhC
Confidence            45889999999986542 25679999999999999999987765443   334445556677788899999999999999


Q ss_pred             CCCCCCCChhhhhcCccCCCCC
Q 041080          216 VNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       216 ~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      .||.+|||++++++||||+...
T Consensus       266 ~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          266 PDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             SSGGGSCCHHHHHTCTTC----
T ss_pred             CCcccCCCHHHHhhChHhhhhc
Confidence            9999999999999999999754


No 76 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.2e-47  Score=311.38  Aligned_cols=233  Identities=28%  Similarity=0.438  Sum_probs=194.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||||++.+...  ......+.+.+|..++..++||||+++++++++.+..++||||+++|+|.+++.+.  .+++.
T Consensus        85 ~~~~vAiK~l~k~~~--~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~  162 (412)
T 2vd5_A           85 TGQVYAMKIMNKWDM--LKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE  162 (412)
T ss_dssp             TCCEEEEEEEEHHHH--HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHH
T ss_pred             CCCEEEEEEEeHHHh--hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHH
Confidence            488999999975321  11223445789999999999999999999999999999999999999999999774  59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccC----
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSK----  151 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~----  151 (247)
                      .++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......   .....|++.|+|||.+...    
T Consensus       163 ~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~  242 (412)
T 2vd5_A          163 MARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP  242 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCc
Confidence            999999999999999999999999999999999999999999999986554332   2345689999999998631    


Q ss_pred             -CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc----CCCCCCCCcCCHHHHHHHHHHhcCCCCCC---CC
Q 041080          152 -NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK----GELPSVPSSLSRDARDFILKCLQVNPNDR---PT  223 (247)
Q Consensus       152 -~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R---ps  223 (247)
                       ...++.++|+||||+++|+|++|..||...+.......+..    ...+..+..+|++++++|.+||. +|.+|   |+
T Consensus       243 ~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~  321 (412)
T 2vd5_A          243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGG  321 (412)
T ss_dssp             TCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTT
T ss_pred             CCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence             22378899999999999999999999988877776655543    22344456899999999999999 99998   59


Q ss_pred             hhhhhcCccCCCC
Q 041080          224 VTELMEHPFVKRP  236 (247)
Q Consensus       224 ~~~il~~p~~~~~  236 (247)
                      ++++++||||+..
T Consensus       322 ~~ei~~Hpff~~i  334 (412)
T 2vd5_A          322 AGDFRTHPFFFGL  334 (412)
T ss_dssp             HHHHHTSGGGTTC
T ss_pred             HHHHhcCCCcCCC
Confidence            9999999999864


No 77 
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.1e-46  Score=295.88  Aligned_cols=234  Identities=31%  Similarity=0.539  Sum_probs=201.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeee--cCCcEEEEEeccccCcHHHHHHhc-----
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDK--DENRLYIFLELVTKGSLANLYQKY-----   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~-----   73 (247)
                      +|+.||+|++.....   .....+.+.+|+.++++++||||+++++++.  ..+..++||||+++++|.+++...     
T Consensus        30 ~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  106 (279)
T 2w5a_A           30 DGKILVWKELDYGSM---TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ  106 (279)
T ss_dssp             TCCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTC
T ss_pred             CCcEEEEEEEEcccC---CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCC
Confidence            478999999976532   3455678899999999999999999999774  467899999999999999998653     


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCC-----eeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCc
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHERN-----VVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPE  146 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~~-----i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE  146 (247)
                      .+++..++.++.|++.||.+||+.|     ++|+||+|+||+++.++.++|+|||.+.......  .....++..|+|||
T Consensus       107 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  186 (279)
T 2w5a_A          107 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE  186 (279)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChH
Confidence            2899999999999999999999999     9999999999999999999999999986544322  12334788999999


Q ss_pred             ccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhh
Q 041080          147 VVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTE  226 (247)
Q Consensus       147 ~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  226 (247)
                      .+.+..  ++.++|+||||+++|+|++|..||...........+..+..+..+..+++++.+++.+||+.+|.+|||+++
T Consensus       187 ~~~~~~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  264 (279)
T 2w5a_A          187 QMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEE  264 (279)
T ss_dssp             HHHCC---CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             HhccCC--CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHH
Confidence            996554  789999999999999999999999988887777777777777788899999999999999999999999999


Q ss_pred             hhcCccCCCCCCC
Q 041080          227 LMEHPFVKRPLQT  239 (247)
Q Consensus       227 il~~p~~~~~~~~  239 (247)
                      +++|+|+.++...
T Consensus       265 ll~~~~~~~~~~~  277 (279)
T 2w5a_A          265 ILENPLILEHHHH  277 (279)
T ss_dssp             HHTSTTCCGGGSC
T ss_pred             HHhChhhhhhccc
Confidence            9999999987554


No 78 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=5.3e-47  Score=313.82  Aligned_cols=234  Identities=25%  Similarity=0.404  Sum_probs=196.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||+|++.+....  .......+.+|+.++..++||||+++++++.+.+..++||||+++|+|.+++.+  ..+++.
T Consensus        98 ~~~~vAvK~~~~~~~~--~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~  175 (437)
T 4aw2_A           98 ADKVFAMKILNKWEML--KRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEE  175 (437)
T ss_dssp             TTEEEEEEEEEHHHHH--HTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHH
T ss_pred             CCcEEEEEEEEHHHhh--hHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHH
Confidence            4788999999753211  111223477899999999999999999999999999999999999999999976  459999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCccccc---CC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNS---KN  152 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~---~~  152 (247)
                      .++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.......   .....|++.|+|||.+..   ..
T Consensus       176 ~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~  255 (437)
T 4aw2_A          176 MARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK  255 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCC
Confidence            999999999999999999999999999999999999999999999986543322   233569999999999862   13


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc----CCCCCCCCcCCHHHHHHHHHHhcCCCCC--CCChhh
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK----GELPSVPSSLSRDARDFILKCLQVNPND--RPTVTE  226 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rps~~~  226 (247)
                      ..++.++|+||||+++|+|++|..||...+..+....+..    ...+.....++++++++|++||..+|.+  |+++++
T Consensus       256 ~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~e  335 (437)
T 4aw2_A          256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIED  335 (437)
T ss_dssp             CEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHH
T ss_pred             CCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHH
Confidence            3378999999999999999999999998877777666543    2334444568999999999999888887  999999


Q ss_pred             hhcCccCCCC
Q 041080          227 LMEHPFVKRP  236 (247)
Q Consensus       227 il~~p~~~~~  236 (247)
                      +++||||+..
T Consensus       336 il~Hpff~~i  345 (437)
T 4aw2_A          336 FKKHPFFSGI  345 (437)
T ss_dssp             HHTSGGGTTC
T ss_pred             HhCCCccCCC
Confidence            9999999853


No 79 
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=9.4e-46  Score=297.83  Aligned_cols=234  Identities=31%  Similarity=0.524  Sum_probs=201.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++.....  ......+.+.+|+.+++.++||||+++++++.+.+..++||||+.+++|.+++... .+++..
T Consensus        65 ~~~~~a~K~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~  142 (335)
T 2owb_A           65 TKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE  142 (335)
T ss_dssp             TCCEEEEEEEEGGGC--CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHH
T ss_pred             CCCEEEEEEechhhh--cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHH
Confidence            377899999976432  23455677889999999999999999999999999999999999999999988764 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      ++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+......  ......++..|+|||.+.+..  ++.
T Consensus       143 ~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~  220 (335)
T 2owb_A          143 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG--HSF  220 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSC--BCT
T ss_pred             HHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCC--CCc
Confidence            9999999999999999999999999999999999999999999998654322  233455889999999996544  788


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      ++|+||||+++|+|++|..||...........+.... ...+..+++.+.+++.+||..||.+|||++++++||||+...
T Consensus       221 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE-YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             hhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCC-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence            9999999999999999999998877666665555443 345678899999999999999999999999999999999865


Q ss_pred             CC
Q 041080          238 QT  239 (247)
Q Consensus       238 ~~  239 (247)
                      ..
T Consensus       300 ~~  301 (335)
T 2owb_A          300 IP  301 (335)
T ss_dssp             CC
T ss_pred             cc
Confidence            43


No 80 
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1.4e-46  Score=294.77  Aligned_cols=234  Identities=28%  Similarity=0.469  Sum_probs=192.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.....  ......+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++... .+++..
T Consensus        35 ~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  112 (276)
T 2h6d_A           35 TGHKVAVKILNRQKI--RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEME  112 (276)
T ss_dssp             TCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHH
T ss_pred             CCceEEEEEeccccc--cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHH
Confidence            478999999975321  12233567889999999999999999999999999999999999999999998654 589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCCCcc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+....... .....+++.|+|||.+.+... .+.+
T Consensus       113 ~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~  191 (276)
T 2h6d_A          113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY-AGPE  191 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCC-CHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCC-CCcc
Confidence            99999999999999999999999999999999999999999999987654332 234457889999999865432 3679


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      +|+||||+++++|++|..||...........+.... ...+..++..+.+++.+||+.+|.+|||++++++||||+....
T Consensus       192 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          192 VDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV-FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             chHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc-ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence            999999999999999999998877666666555443 3456778999999999999999999999999999999998654


No 81 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.2e-46  Score=302.44  Aligned_cols=227  Identities=24%  Similarity=0.422  Sum_probs=185.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC----------------------------
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN----------------------------   52 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----------------------------   52 (247)
                      +|+.||||++....    .....+.+.+|+.++++++||||+++++++.+.+                            
T Consensus        30 ~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (332)
T 3qd2_B           30 DDCNYAIKRIRLPN----RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPM  105 (332)
T ss_dssp             TCCEEEEEEEECCS----TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------
T ss_pred             CCcEEEEEEeecCC----chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcc
Confidence            58899999997643    2335667899999999999999999999875443                            


Q ss_pred             -----------------------------cEEEEEeccccCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHhhhCCe
Q 041080           53 -----------------------------RLYIFLELVTKGSLANLYQKYH----LSDSQVSSYTRQILNGLVYLHERNV   99 (247)
Q Consensus        53 -----------------------------~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~l~~~l~~lh~~~i   99 (247)
                                                   ..++||||+++++|.+++++..    .++..++.++.|++.||.+||++|+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  185 (332)
T 3qd2_B          106 DAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL  185 (332)
T ss_dssp             --------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCe
Confidence                                         3899999999999999998754    5566789999999999999999999


Q ss_pred             eecCCCCCcEEEcCCCCeEEcccccccccCccc--------------cccCCCCCCccCCcccccCCCCCCcchhHHHHH
Q 041080          100 VHRDIKCANILVDASGSVKLADFGLAKATTMND--------------LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLG  165 (247)
Q Consensus       100 ~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--------------~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG  165 (247)
                      +|+||||+||+++.++.++|+|||.+.......              .....|++.|+|||.+.+..  ++.++|+||||
T Consensus       186 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Di~slG  263 (332)
T 3qd2_B          186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNN--YSHKVDIFSLG  263 (332)
T ss_dssp             ECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCC--CCTHHHHHHHH
T ss_pred             eecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCC--CcchhhHHHHH
Confidence            999999999999999999999999987554331              23345899999999997654  79999999999


Q ss_pred             HHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          166 CTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       166 ~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                      +++|+|++|..|+..  .............+......++++.+++.+||+.+|.+|||++++++||||+.
T Consensus       264 ~il~el~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          264 LILFELLYSFSTQME--RVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHHHHHHSCCCCHHH--HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             HHHHHHHHcCCChhH--HHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            999999998766422  22233333344444444567788999999999999999999999999999985


No 82 
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.9e-46  Score=292.16  Aligned_cols=235  Identities=25%  Similarity=0.419  Sum_probs=193.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++.....    ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.+++... .+++..
T Consensus        31 ~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  106 (276)
T 2yex_A           31 TEEAVAVKIVDMKRA----VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD  106 (276)
T ss_dssp             TCCEEEEEEEEGGGC----TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHH
T ss_pred             CCcEEEEEEeeeccc----hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHH
Confidence            478999999975432    234567889999999999999999999999999999999999999999988654 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc----ccccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN----DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......    ......++..|+|||.+.+... .
T Consensus       107 ~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~  185 (276)
T 2yex_A          107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF-H  185 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSB-C
T ss_pred             HHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCC-C
Confidence            9999999999999999999999999999999999999999999998644322    1234558889999999865431 3


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHH-HHHhhcC-CCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccC
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQA-LFRIGKG-ELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFV  233 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~  233 (247)
                      +.++|+||||+++++|++|..||........ ....... ........+++.+.+++.+||..+|.+|||++++++||||
T Consensus       186 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  265 (276)
T 2yex_A          186 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY  265 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccc
Confidence            6789999999999999999999976554322 2222221 1122235689999999999999999999999999999999


Q ss_pred             CCCCCCC
Q 041080          234 KRPLQTP  240 (247)
Q Consensus       234 ~~~~~~~  240 (247)
                      +......
T Consensus       266 ~~~~~~~  272 (276)
T 2yex_A          266 NKPLKKG  272 (276)
T ss_dssp             TCCCC--
T ss_pred             cChhhcc
Confidence            9876543


No 83 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=1.1e-46  Score=319.30  Aligned_cols=230  Identities=26%  Similarity=0.428  Sum_probs=195.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC---CCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH---LSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~   77 (247)
                      +|+.||||++......  .......+.+|+.++++++||||+++++++.+.+..++||||++||+|.+++...+   +++
T Consensus       208 tg~~vAvK~l~k~~~~--~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e  285 (576)
T 2acx_A          208 TGKMYACKKLEKKRIK--KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE  285 (576)
T ss_dssp             TCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCH
T ss_pred             CCCEEEEEEEEhHhhh--hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCH
Confidence            5889999999764321  12234567899999999999999999999999999999999999999999987643   999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ..++.++.|++.||.|||++||+|+||||+||+++.+|.++|+|||++....... .....|++.|+|||.+.+..  ++
T Consensus       286 ~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~--~~  363 (576)
T 2acx_A          286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER--YT  363 (576)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCE--ES
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCC--CC
Confidence            9999999999999999999999999999999999999999999999987654332 34457999999999996544  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChh----hHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC-----Chhhh
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEG----VQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRP-----TVTEL  227 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~i  227 (247)
                      .++|+||||+++|+|++|..||.....    ......+.. ....++..++++++++|.+||+.||.+||     +++++
T Consensus       364 ~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~ei  442 (576)
T 2acx_A          364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV  442 (576)
T ss_dssp             SHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHH
T ss_pred             ccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHH
Confidence            999999999999999999999976532    222333332 33456778999999999999999999999     78999


Q ss_pred             hcCccCCC
Q 041080          228 MEHPFVKR  235 (247)
Q Consensus       228 l~~p~~~~  235 (247)
                      ++||||+.
T Consensus       443 l~HpfF~~  450 (576)
T 2acx_A          443 KEHPLFKK  450 (576)
T ss_dssp             HTSGGGTT
T ss_pred             HhChhhcc
Confidence            99999986


No 84 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.5e-46  Score=301.79  Aligned_cols=232  Identities=26%  Similarity=0.459  Sum_probs=182.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++.+++..++||||+.+ +|.+++... .+++..
T Consensus        58 ~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~  133 (329)
T 3gbz_A           58 TNETVAIKRIRLEH---EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRV  133 (329)
T ss_dssp             TTEEEEEEECCCCC-----------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHH
T ss_pred             CCceEEEEEEcccc---cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHH
Confidence            47899999997543   2233455677999999999999999999999999999999999986 999988765 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc-----CCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVD-----ASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~-----~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~  152 (247)
                      ++.++.|++.||.+||++|++|+||||+||+++     .++.++|+|||.+......  ......++..|+|||.+.+..
T Consensus       134 ~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  213 (329)
T 3gbz_A          134 IKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR  213 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCC
Confidence            999999999999999999999999999999995     4445999999998654322  233445789999999986533


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC-CC----------------CC------------CCcCC
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE-LP----------------SV------------PSSLS  203 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~-~~----------------~~------------~~~~~  203 (247)
                       .++.++||||||+++|+|++|..||......+....+.... .+                ..            +..++
T Consensus       214 -~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (329)
T 3gbz_A          214 -HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD  292 (329)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSC
T ss_pred             -CCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccC
Confidence             27899999999999999999999998877666554432210 00                00            01268


Q ss_pred             HHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          204 RDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       204 ~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      +++.++|.+||+.||.+|||++++++||||+...
T Consensus       293 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          293 DEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence            9999999999999999999999999999999763


No 85 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.1e-46  Score=301.19  Aligned_cols=234  Identities=27%  Similarity=0.437  Sum_probs=188.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||||++...............+.+|+.++++++||||+++++++...+..++||||+.+ +|.+++...  .+++.
T Consensus        34 ~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~  112 (346)
T 1ua2_A           34 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPS  112 (346)
T ss_dssp             CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSS
T ss_pred             CCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHH
Confidence            478999999976543333333345678999999999999999999999999999999999987 898888765  38899


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||.+......  ......+++.|+|||.+.+.. .++
T Consensus       113 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~  191 (346)
T 1ua2_A          113 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR-MYG  191 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCS-CCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCC-CCC
Confidence            99999999999999999999999999999999999999999999998765432  233456899999999986433 268


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC--C--C------------------CCC-----CCcCCHHHHHH
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG--E--L------------------PSV-----PSSLSRDARDF  209 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~--~--~------------------~~~-----~~~~~~~~~~l  209 (247)
                      .++|+||||+++|+|++|..||...........+...  .  .                  +..     ....+++++++
T Consensus       192 ~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  271 (346)
T 1ua2_A          192 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDL  271 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHH
T ss_pred             chhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHH
Confidence            8999999999999999999999887766555443221  0  0                  000     14567899999


Q ss_pred             HHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          210 ILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       210 i~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      |.+||..||.+|||++|+++||||+..
T Consensus       272 i~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          272 IQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             HHHHhccChhhCCCHHHHhcChhhhcC
Confidence            999999999999999999999999874


No 86 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=4.7e-46  Score=301.03  Aligned_cols=229  Identities=29%  Similarity=0.436  Sum_probs=179.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++....       ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++... .+++..
T Consensus        77 ~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  149 (349)
T 2w4o_A           77 TQKPYALKVLKKTV-------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD  149 (349)
T ss_dssp             TCCEEEEEEEEC-----------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHH
T ss_pred             CCcEEEEEEeccch-------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHH
Confidence            46789999997532       2345779999999999999999999999999999999999999999988765 489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC---CCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDA---SGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~---~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.   ++.++|+|||.+....... .....|++.|+|||.+.+..  +
T Consensus       150 ~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~  227 (349)
T 2w4o_A          150 AADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA--Y  227 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCC--C
T ss_pred             HHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCC--C
Confidence            9999999999999999999999999999999975   8899999999987554332 23455899999999996544  7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhH-HHHHhhcCCCC---CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQ-ALFRIGKGELP---SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p  231 (247)
                      +.++||||||+++|+|++|..||....... ....+......   .....++.+++++|.+||..||.+|||++++++||
T Consensus       228 ~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  307 (349)
T 2w4o_A          228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP  307 (349)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            899999999999999999999997665544 33344333322   23357899999999999999999999999999999


Q ss_pred             cCCCCCC
Q 041080          232 FVKRPLQ  238 (247)
Q Consensus       232 ~~~~~~~  238 (247)
                      ||+....
T Consensus       308 ~~~~~~~  314 (349)
T 2w4o_A          308 WVTGKAA  314 (349)
T ss_dssp             TTTSTTC
T ss_pred             ccCCCcc
Confidence            9997543


No 87 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.9e-46  Score=313.51  Aligned_cols=229  Identities=26%  Similarity=0.430  Sum_probs=182.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC------CcEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE------NRLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++....   ......+.+.+|+.+++.++||||+++++++...      ...++||||+++ +|.+.+.. .
T Consensus        86 ~~~~vAiK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~-~  160 (464)
T 3ttj_A           86 LDRNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM-E  160 (464)
T ss_dssp             TTEEEEEEEEESGG---GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS-C
T ss_pred             CCCEEEEEEECccc---cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh-c
Confidence            47899999997542   3455667788999999999999999999998654      457999999987 56666643 5


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      +++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++....... .....+++.|+|||.+.+.. 
T Consensus       161 l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-  239 (464)
T 3ttj_A          161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-  239 (464)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCC-
Confidence            9999999999999999999999999999999999999999999999999997655432 34466899999999997654 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC---------------------CCCCC---------C---
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE---------------------LPSVP---------S---  200 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~---------------------~~~~~---------~---  200 (247)
                       ++.++||||+|+++|+|++|+.||...+..+....+....                     .+...         .   
T Consensus       240 -~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (464)
T 3ttj_A          240 -YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF  318 (464)
T ss_dssp             -CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGS
T ss_pred             -CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccc
Confidence             8899999999999999999999998876655544332110                     00000         0   


Q ss_pred             --------cCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          201 --------SLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       201 --------~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                              ..++++++||.+||..||.+|||++|+++||||+..
T Consensus       319 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          319 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             ccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence                    015679999999999999999999999999999864


No 88 
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.4e-45  Score=292.21  Aligned_cols=237  Identities=28%  Similarity=0.480  Sum_probs=199.3

Q ss_pred             CCceEEEEEEeecCCCcc----chHHHHHHHHHHHHHhhcC-CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-C
Q 041080            1 DGFFFAVKEVSLQDQGAQ----GKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-H   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~----~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~   74 (247)
                      +|+.||||++.....+..    .....+.+.+|+.+++++. ||||+++++++...+..++||||+++++|.+++... .
T Consensus        41 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  120 (298)
T 1phk_A           41 TCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT  120 (298)
T ss_dssp             TTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSS
T ss_pred             cCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCC
Confidence            478999999976543222    2334567889999999995 999999999999999999999999999999998765 5


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc-ccccCCCCCCccCCccccc---
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNS---  150 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~---  150 (247)
                      +++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+...... ......++..|+|||.+.+   
T Consensus       121 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  200 (298)
T 1phk_A          121 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN  200 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccc
Confidence            999999999999999999999999999999999999999999999999998654433 2334558899999999852   


Q ss_pred             -CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhh
Q 041080          151 -KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTE  226 (247)
Q Consensus       151 -~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~  226 (247)
                       ....++.++|+||||+++++|++|..||...........+........   ...++..+.+++.+||+.+|.+|||+++
T Consensus       201 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  280 (298)
T 1phk_A          201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEE  280 (298)
T ss_dssp             TTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             cccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHH
Confidence             123368899999999999999999999988777666665555433221   2468999999999999999999999999


Q ss_pred             hhcCccCCCCC
Q 041080          227 LMEHPFVKRPL  237 (247)
Q Consensus       227 il~~p~~~~~~  237 (247)
                      +++||||+...
T Consensus       281 ll~h~~~~~~~  291 (298)
T 1phk_A          281 ALAHPFFQQYV  291 (298)
T ss_dssp             HTTSGGGCTTC
T ss_pred             HHhChHhhhcc
Confidence            99999999754


No 89 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=4.6e-46  Score=314.62  Aligned_cols=230  Identities=26%  Similarity=0.438  Sum_probs=195.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-----CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-----HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~   75 (247)
                      +|+.||||++.+....  .....+.+.+|+.++++++||||+++++++.+.+..++||||++||+|.+++...     .+
T Consensus       209 tg~~vAiK~l~k~~~~--~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l  286 (543)
T 3c4z_A          209 TGKLYACKKLNKKRLK--KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF  286 (543)
T ss_dssp             TCCEEEEEEEEHHHHH--HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSC
T ss_pred             CCcEEEEEEEEhHHhh--hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccc
Confidence            4889999999764321  1223567889999999999999999999999999999999999999999998753     49


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      ++..++.++.|++.||.|||++||+|+||||+||+++.+|.++|+|||++.......  .....|++.|+|||.+.+.. 
T Consensus       287 ~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-  365 (543)
T 3c4z_A          287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-  365 (543)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCC-
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCC-
Confidence            999999999999999999999999999999999999999999999999987654332  23457999999999996543 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCh----hhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCC-----h
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLE----GVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPT-----V  224 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps-----~  224 (247)
                       ++.++|+||||+++|+|++|..||....    .......+... ...++..++++++++|.+||+.+|.+||+     +
T Consensus       366 -~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a  443 (543)
T 3c4z_A          366 -YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ-AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSC  443 (543)
T ss_dssp             -BCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBS
T ss_pred             -CChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc-ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCH
Confidence             8899999999999999999999997653    23333443333 34567789999999999999999999996     4


Q ss_pred             hhhhcCccCCC
Q 041080          225 TELMEHPFVKR  235 (247)
Q Consensus       225 ~~il~~p~~~~  235 (247)
                      +++++||||+.
T Consensus       444 ~ei~~Hpff~~  454 (543)
T 3c4z_A          444 DGLRTHPLFRD  454 (543)
T ss_dssp             HHHHTSGGGTT
T ss_pred             HHHHcCccccC
Confidence            88999999996


No 90 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=8.9e-46  Score=294.70  Aligned_cols=235  Identities=31%  Similarity=0.544  Sum_probs=191.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC----CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH----LS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~   76 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.+.+    ++
T Consensus        59 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  135 (309)
T 3p86_A           59 HGSDVAVKILMEQD---FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLD  135 (309)
T ss_dssp             TTEEEEEEEECCCC---CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSC
T ss_pred             CCCcEEEEEecCCC---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCC
Confidence            47889999997543   234556778999999999999999999999999999999999999999999997654    89


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCC
Q 041080           77 DSQVSSYTRQILNGLVYLHERN--VVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~  152 (247)
                      +..++.++.|++.||.+||+.|  ++|+||||+||+++.++.++|+|||.+.......  .....|++.|+|||.+.+..
T Consensus       136 ~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  215 (309)
T 3p86_A          136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP  215 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCC
Confidence            9999999999999999999999  9999999999999999999999999986543332  23456899999999996554


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhh-cCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc--
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIG-KGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME--  229 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~--  229 (247)
                        ++.++||||||+++|+|++|..||...........+. .......+..+++++.+++.+||+.+|.+|||++++++  
T Consensus       216 --~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L  293 (309)
T 3p86_A          216 --SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL  293 (309)
T ss_dssp             --CCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             --CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence              7889999999999999999999999887777665553 34445677889999999999999999999999999987  


Q ss_pred             CccCCCCCCCC
Q 041080          230 HPFVKRPLQTP  240 (247)
Q Consensus       230 ~p~~~~~~~~~  240 (247)
                      .++++.....+
T Consensus       294 ~~~~~~~~p~~  304 (309)
T 3p86_A          294 RPLIKSAVPPP  304 (309)
T ss_dssp             HHHHC------
T ss_pred             HHHHHhCCCCC
Confidence            66776654443


No 91 
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=4.2e-46  Score=302.65  Aligned_cols=230  Identities=30%  Similarity=0.516  Sum_probs=193.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++...    ......+.+.+|+.++++++||||+++++++..++..++||||+++++|.++++.. .+++..
T Consensus        57 ~~~~va~K~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  132 (360)
T 3eqc_A           57 SGLVMARKLIHLE----IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQI  132 (360)
T ss_dssp             TCCEEEEEEEECC----CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEeccc----cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHH
Confidence            4789999999754    23455677899999999999999999999999999999999999999999999765 599999


Q ss_pred             HHHHHHHHHHHHHHhhhC-CeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcc
Q 041080           80 VSSYTRQILNGLVYLHER-NVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~-~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      +..++.|++.||.+||+. |++|+||||+||+++.++.++|+|||.+............+++.|+|||.+.+..  ++.+
T Consensus       133 ~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~  210 (360)
T 3eqc_A          133 LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH--YSVQ  210 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCC--CSHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCC--CCch
Confidence            999999999999999986 9999999999999999999999999998655444455567899999999996544  7899


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCChhhHHH------------------------------------------HHhhcCCCC
Q 041080          159 ADIWSLGCTVLEMLTRRPPYSHLEGVQAL------------------------------------------FRIGKGELP  196 (247)
Q Consensus       159 ~Di~slG~ll~~l~~g~~p~~~~~~~~~~------------------------------------------~~~~~~~~~  196 (247)
                      +|+||||+++|+|++|..||.........                                          ..+.....+
T Consensus       211 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (360)
T 3eqc_A          211 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP  290 (360)
T ss_dssp             HHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCC
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCC
Confidence            99999999999999999999765543322                                          112222222


Q ss_pred             CC-CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          197 SV-PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       197 ~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      .. ...++.++.++|.+||..+|.+|||++++++||||+..
T Consensus       291 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          291 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence            22 23579999999999999999999999999999999863


No 92 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=5.4e-46  Score=296.88  Aligned_cols=230  Identities=28%  Similarity=0.482  Sum_probs=184.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++....     ....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++++|.+++... .+++.
T Consensus        37 ~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  111 (316)
T 2ac3_A           37 TSQEYAVKIIEKQP-----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNEL  111 (316)
T ss_dssp             SCCEEEEEEEECCS-----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHH
T ss_pred             CCcEEEEEEEeeCc-----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHH
Confidence            47899999997542     22345678999999995 7999999999999999999999999999999998764 58999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC---eEEcccccccccCcc---------ccccCCCCCCccCCc
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS---VKLADFGLAKATTMN---------DLKSCKGTPFWMAPE  146 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~---~~l~df~~~~~~~~~---------~~~~~~~~~~~~aPE  146 (247)
                      .++.++.|++.||.+||++|++|+||||+||+++.++.   ++|+|||.+......         ......|+..|+|||
T Consensus       112 ~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  191 (316)
T 2ac3_A          112 EASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE  191 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChH
Confidence            99999999999999999999999999999999998776   999999998644321         122344889999999


Q ss_pred             ccccCC---CCCCcchhHHHHHHHHHHHHhCCCCCCCChh---------------hHHHHHhhcCCCCCCC----CcCCH
Q 041080          147 VVNSKN---DGYGLTADIWSLGCTVLEMLTRRPPYSHLEG---------------VQALFRIGKGELPSVP----SSLSR  204 (247)
Q Consensus       147 ~~~~~~---~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~---------------~~~~~~~~~~~~~~~~----~~~~~  204 (247)
                      .+.+..   ..++.++||||||+++|+|++|..||.....               ......+..... ..+    ..+++
T Consensus       192 ~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~  270 (316)
T 2ac3_A          192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY-EFPDKDWAHISC  270 (316)
T ss_dssp             HHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCC-CCCHHHHTTSCH
T ss_pred             HhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCc-ccCchhcccCCH
Confidence            986411   2267899999999999999999999976532               222333333332 222    46899


Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ++++++.+||..||.+|||++++++||||+..
T Consensus       271 ~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          271 AAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            99999999999999999999999999999964


No 93 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-45  Score=294.27  Aligned_cols=226  Identities=30%  Similarity=0.440  Sum_probs=181.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~   77 (247)
                      +|+.||||++.....   ..........|+..+.++ +||||+++++++.+++..++||||+ +++|.+++...  .+++
T Consensus        81 ~~~~vavK~~~~~~~---~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~  156 (311)
T 3p1a_A           81 DGRLYAVKRSMSPFR---GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPE  156 (311)
T ss_dssp             TSCEEEEEEESSSCC---SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCH
T ss_pred             CCeEEEEEEeccccc---ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCH
Confidence            588999999865432   233344455666666665 8999999999999999999999999 55888887664  4999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||.+....... .....|++.|+|||.+.+   .++
T Consensus       157 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~  233 (311)
T 3p1a_A          157 AQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG---SYG  233 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT---CCS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC---CCC
Confidence            9999999999999999999999999999999999999999999999986554333 234458999999999865   378


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC-CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE-LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                      .++||||||+++++|++|..++.....   ...+.... .+..+..+++++.+++.+||+.+|.+|||++++++||||++
T Consensus       234 ~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          234 TAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             THHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            999999999999999999766544332   22222222 22344678999999999999999999999999999999986


Q ss_pred             C
Q 041080          236 P  236 (247)
Q Consensus       236 ~  236 (247)
                      +
T Consensus       311 p  311 (311)
T 3p1a_A          311 P  311 (311)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 94 
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1.9e-46  Score=301.66  Aligned_cols=229  Identities=25%  Similarity=0.391  Sum_probs=191.6

Q ss_pred             CCceEEEEEEeecCCCcc---chHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccC-cHHHHHHhc-CC
Q 041080            1 DGFFFAVKEVSLQDQGAQ---GKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKG-SLANLYQKY-HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~-~~   75 (247)
                      +|+.||||++........   .....+.+.+|+.++++++||||+++++++...+..++||||+.+| +|.+++... .+
T Consensus        48 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l  127 (335)
T 3dls_A           48 KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL  127 (335)
T ss_dssp             TTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCC
T ss_pred             CCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCC
Confidence            478999999987543221   1123345678999999999999999999999999999999998766 999999776 59


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      ++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||.+....... .....|++.|+|||.+.+... 
T Consensus       128 ~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-  206 (335)
T 3dls_A          128 DEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY-  206 (335)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCB-
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCC-
Confidence            999999999999999999999999999999999999999999999999987554332 334558999999999865442 


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCC
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVK  234 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~  234 (247)
                      .+.++||||||+++|+|++|..||......       .......+..+++++.+++.+||+++|.+|||++++++||||+
T Consensus       207 ~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~  279 (335)
T 3dls_A          207 RGPELEMWSLGVTLYTLVFEENPFCELEET-------VEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVT  279 (335)
T ss_dssp             CSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------TTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTT
T ss_pred             CCCcccchhHHHHHHHHHhCCCchhhHHHH-------HhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence            378899999999999999999999764321       1122344566899999999999999999999999999999998


Q ss_pred             CCC
Q 041080          235 RPL  237 (247)
Q Consensus       235 ~~~  237 (247)
                      ...
T Consensus       280 ~~~  282 (335)
T 3dls_A          280 QPV  282 (335)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            754


No 95 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=9.2e-46  Score=321.52  Aligned_cols=231  Identities=25%  Similarity=0.410  Sum_probs=201.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~   78 (247)
                      +|+.||||++.+....  .....+.+..|..++..+ +||+|+++++++++.+.+++||||+++|+|.+++.+ ..+++.
T Consensus       365 ~~~~vAvK~l~~~~~~--~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~  442 (674)
T 3pfq_A          365 TDELYAVKILKKDVVI--QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP  442 (674)
T ss_dssp             SCCEEEEEEEEHHHHH--HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHH
T ss_pred             CCcEEEEEEEeccccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHH
Confidence            4788999999764221  122345677899999988 699999999999999999999999999999999876 459999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccC--ccccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATT--MNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++....  ........|++.|+|||.+.+..  ++
T Consensus       443 ~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~  520 (674)
T 3pfq_A          443 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQP--YG  520 (674)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCC--BS
T ss_pred             HHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCC--CC
Confidence            999999999999999999999999999999999999999999999986432  22344566999999999996544  89


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh-----hhhhcCc
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV-----TELMEHP  231 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~p  231 (247)
                      .++|+||||+++|+|++|..||...+..+....+.... ..++..+++++++||.+||+.||.+||++     ++|++||
T Consensus       521 ~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~  599 (674)
T 3pfq_A          521 KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN-VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA  599 (674)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC-CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSG
T ss_pred             ccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC-CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCc
Confidence            99999999999999999999999988888888777654 46678899999999999999999999998     9999999


Q ss_pred             cCCCC
Q 041080          232 FVKRP  236 (247)
Q Consensus       232 ~~~~~  236 (247)
                      ||+.+
T Consensus       600 ff~~i  604 (674)
T 3pfq_A          600 FFRYI  604 (674)
T ss_dssp             GGSSC
T ss_pred             cccCC
Confidence            99864


No 96 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=6.7e-46  Score=312.49  Aligned_cols=231  Identities=30%  Similarity=0.525  Sum_probs=196.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||||++......   ......+.+|+.++++++||||+++++++.+.+..++||||+.+++|.+.+.. ..+++..
T Consensus        46 ~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  122 (486)
T 3mwu_A           46 TQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD  122 (486)
T ss_dssp             TCCEEEEEEEEHHHHB---CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHH
T ss_pred             CCCEEEEEEEeccccc---chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHH
Confidence            4789999999764322   22345688999999999999999999999999999999999999999887754 5699999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc---CCCCeEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVD---ASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~---~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.|||++||+|+||||+||+++   .++.++|+|||++...... ......|++.|+|||.+.+.   +
T Consensus       123 ~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~  199 (486)
T 3mwu_A          123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT---Y  199 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSC---C
T ss_pred             HHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCC---C
Confidence            999999999999999999999999999999995   4567999999998754433 23455689999999998652   7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++||||+|+++|+|++|..||......+....+..+.....   ...++++++++|.+||..+|.+|||+.++++|||
T Consensus       200 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~  279 (486)
T 3mwu_A          200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW  279 (486)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence            8999999999999999999999998888887777766544322   2468999999999999999999999999999999


Q ss_pred             CCCCC
Q 041080          233 VKRPL  237 (247)
Q Consensus       233 ~~~~~  237 (247)
                      |+...
T Consensus       280 ~~~~~  284 (486)
T 3mwu_A          280 IQKYS  284 (486)
T ss_dssp             HHHTC
T ss_pred             hccCc
Confidence            98753


No 97 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.6e-45  Score=299.71  Aligned_cols=231  Identities=29%  Similarity=0.506  Sum_probs=192.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC-----CcEEEEEeccccCcHHHHHHhcCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE-----NRLYIFLELVTKGSLANLYQKYHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~   75 (247)
                      +|+.||||++...    ......+.+.+|+.++++++||||+++++++...     ...++||||+.+ +|.++++...+
T Consensus        51 ~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~~~~~  125 (364)
T 3qyz_A           51 NKVRVAIKKISPF----EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHL  125 (364)
T ss_dssp             TTEEEEEEEECCT----TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHHHCCC
T ss_pred             CCeEEEEEEeccc----cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHHhCCC
Confidence            4788999999642    3345567788999999999999999999998654     478999999976 99999998889


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCccccc
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNS  150 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~  150 (247)
                      ++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......     .....|++.|+|||.+.+
T Consensus       126 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  205 (364)
T 3qyz_A          126 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN  205 (364)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcC
Confidence            999999999999999999999999999999999999999999999999987554332     234468999999998754


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC------------------------C-C-----CCCCC
Q 041080          151 KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG------------------------E-L-----PSVPS  200 (247)
Q Consensus       151 ~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~------------------------~-~-----~~~~~  200 (247)
                      .. .++.++||||||+++|+|++|..||......+....+...                        . .     .....
T Consensus       206 ~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (364)
T 3qyz_A          206 SK-GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP  284 (364)
T ss_dssp             BC-SCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCT
T ss_pred             CC-CCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCC
Confidence            33 2788999999999999999999999877665554443210                        0 0     01124


Q ss_pred             cCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          201 SLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       201 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      .+++++.++|.+||+.||.+|||++++++||||+...
T Consensus       285 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          285 NADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            5789999999999999999999999999999999763


No 98 
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.5e-45  Score=291.55  Aligned_cols=233  Identities=38%  Similarity=0.661  Sum_probs=191.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc----CCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY----HLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~   76 (247)
                      +|+.||||.+....     ....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++...    .++
T Consensus        46 ~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  120 (295)
T 2clq_A           46 NQVRIAIKEIPERD-----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN  120 (295)
T ss_dssp             TCCEEEEEEEECCC-----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTC
T ss_pred             CCeEEEEEEccCCc-----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCcc
Confidence            47889999997532     234567889999999999999999999999999999999999999999999765    366


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC-CCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA-SGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~-~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      +..++.++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||.+.......  .....++..|+|||.+.+...
T Consensus       121 ~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  200 (295)
T 2clq_A          121 EQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR  200 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCC
Confidence            8889999999999999999999999999999999987 8999999999986544222  234558899999999865444


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHH--HHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCc
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQA--LFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p  231 (247)
                      .++.++|+||||+++|+|++|..||........  .........+..+..+++++.+++.+||..+|.+|||++++++||
T Consensus       201 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~  280 (295)
T 2clq_A          201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDE  280 (295)
T ss_dssp             GCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSG
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence            478899999999999999999999965433222  222223445567788999999999999999999999999999999


Q ss_pred             cCCCCCC
Q 041080          232 FVKRPLQ  238 (247)
Q Consensus       232 ~~~~~~~  238 (247)
                      ||+....
T Consensus       281 ~~~~~~~  287 (295)
T 2clq_A          281 FLKVSSK  287 (295)
T ss_dssp             GGCC---
T ss_pred             hhhhccc
Confidence            9997643


No 99 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=1.5e-45  Score=310.96  Aligned_cols=229  Identities=27%  Similarity=0.504  Sum_probs=194.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|..||||++........   ....+.+|+.+++.++||||+++++++.+.+..++||||+++++|.+.+.. ..+++..
T Consensus        61 ~~~~~aiK~~~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~  137 (494)
T 3lij_A           61 THVERAIKIIRKTSVSTS---SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVD  137 (494)
T ss_dssp             TCCEEEEEEEEC-----C---TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEEeccccCch---HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHH
Confidence            478899999986543222   245678999999999999999999999999999999999999999887754 4699999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC---CCeEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS---GSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~---~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.|||+.|++|+||||+||+++..   +.++|+|||++...... ......|++.|+|||.+.+   .+
T Consensus       138 ~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~---~~  214 (494)
T 3lij_A          138 AAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK---KY  214 (494)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTT---CB
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHcc---cC
Confidence            99999999999999999999999999999999764   45999999998655433 3345668999999999853   37


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCC---CcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVP---SSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++||||+|+++|+|++|..||...........+..+......   ..++++++++|.+||+.+|.+|||++++++|||
T Consensus       215 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~  294 (494)
T 3lij_A          215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW  294 (494)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred             CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence            88999999999999999999999998888887777665543222   468999999999999999999999999999999


Q ss_pred             CCC
Q 041080          233 VKR  235 (247)
Q Consensus       233 ~~~  235 (247)
                      |+.
T Consensus       295 ~~~  297 (494)
T 3lij_A          295 IKE  297 (494)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            975


No 100
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1e-45  Score=290.87  Aligned_cols=235  Identities=29%  Similarity=0.476  Sum_probs=196.4

Q ss_pred             CCceEEEEEEeecCCCcc-chHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQ-GKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||+|++........ .....+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++... .+++.
T Consensus        29 ~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  108 (283)
T 3bhy_A           29 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED  108 (283)
T ss_dssp             TCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHH
T ss_pred             CCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHH
Confidence            478999999987643322 2224667889999999999999999999999999999999999999999998654 59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC----CeEEcccccccccCcc-ccccCCCCCCccCCcccccCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG----SVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~----~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      .++.++.|++.||.+||+.|++|+||+|+||+++.++    .++|+|||.+...... ......+++.|+|||.+.+.. 
T Consensus       109 ~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-  187 (283)
T 3bhy_A          109 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEP-  187 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCC-
Confidence            9999999999999999999999999999999998877    7999999998654432 233445889999999986544 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC---CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS---VPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                       ++.++|+||||++++++++|..||...........+.......   .....++.+.+++.+||..+|.+|||++++++|
T Consensus       188 -~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  266 (283)
T 3bhy_A          188 -LGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH  266 (283)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred             -CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence             7899999999999999999999998877776666655443321   125678999999999999999999999999999


Q ss_pred             ccCCCCC
Q 041080          231 PFVKRPL  237 (247)
Q Consensus       231 p~~~~~~  237 (247)
                      |||+...
T Consensus       267 ~~~~~~~  273 (283)
T 3bhy_A          267 SWIKAIR  273 (283)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998753


No 101
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=6e-46  Score=298.52  Aligned_cols=232  Identities=34%  Similarity=0.546  Sum_probs=189.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.++... .++++..
T Consensus        49 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~  125 (331)
T 4aaa_A           49 TGRIVAIKKFLESD---DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQV  125 (331)
T ss_dssp             TCCEEEEEEEESCS---SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHH
T ss_pred             CCceEEEEEEecCC---CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHH
Confidence            47899999997543   3344566788999999999999999999999999999999999999988887654 4599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCCc
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+......  ......++..|+|||.+.+.. .++.
T Consensus       126 ~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~  204 (331)
T 4aaa_A          126 VQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV-KYGK  204 (331)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCT-TCCT
T ss_pred             HHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCC-Ccch
Confidence            9999999999999999999999999999999999999999999998654332  233456899999999986542 3788


Q ss_pred             chhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc---------------------CCCCCC---------CCcCCHHHH
Q 041080          158 TADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK---------------------GELPSV---------PSSLSRDAR  207 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~---------------------~~~~~~---------~~~~~~~~~  207 (247)
                      ++|+||||+++|+|++|..||...........+..                     ...+..         ...+++.+.
T Consensus       205 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  284 (331)
T 4aaa_A          205 AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVI  284 (331)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHH
Confidence            99999999999999999999987765554433211                     001111         135789999


Q ss_pred             HHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          208 DFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       208 ~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      +++.+||..||.+|||++++++||||+..
T Consensus       285 ~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          285 DLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             HHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             HHHHHHhccCcccCCCHHHHhcCchhccC
Confidence            99999999999999999999999999853


No 102
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=1.4e-45  Score=311.73  Aligned_cols=235  Identities=26%  Similarity=0.446  Sum_probs=198.5

Q ss_pred             CCceEEEEEEeecCCCcc--------chHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh
Q 041080            1 DGFFFAVKEVSLQDQGAQ--------GKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   72 (247)
                      +|+.||||++........        .....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+.+..
T Consensus        60 ~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~  139 (504)
T 3q5i_A           60 GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN  139 (504)
T ss_dssp             TCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH
T ss_pred             CCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHH
Confidence            478899999976542211        113456788999999999999999999999999999999999999999887755


Q ss_pred             -cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC---CeEEcccccccccCcc-ccccCCCCCCccCCcc
Q 041080           73 -YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG---SVKLADFGLAKATTMN-DLKSCKGTPFWMAPEV  147 (247)
Q Consensus        73 -~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~---~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~  147 (247)
                       ..+++..++.++.|++.||.|||+.|++|+||||+||+++.++   .++|+|||++...... ......|++.|+|||.
T Consensus       140 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  219 (504)
T 3q5i_A          140 RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV  219 (504)
T ss_dssp             HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHH
Confidence             4699999999999999999999999999999999999998876   6999999998755433 3345668999999999


Q ss_pred             cccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCCh
Q 041080          148 VNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTV  224 (247)
Q Consensus       148 ~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~  224 (247)
                      +.+   .++.++||||+|+++|+|++|..||...........+..+.....   ...++++++++|.+||..+|.+|||+
T Consensus       220 ~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~  296 (504)
T 3q5i_A          220 LKK---KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTA  296 (504)
T ss_dssp             HTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             hcc---CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCH
Confidence            863   378899999999999999999999999888888877776654322   15689999999999999999999999


Q ss_pred             hhhhcCccCCCCCC
Q 041080          225 TELMEHPFVKRPLQ  238 (247)
Q Consensus       225 ~~il~~p~~~~~~~  238 (247)
                      +++++||||+....
T Consensus       297 ~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          297 EEALNSRWIKKYAN  310 (504)
T ss_dssp             HHHHTSHHHHHTCC
T ss_pred             HHHhcCHhhhhchh
Confidence            99999999987543


No 103
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.7e-46  Score=300.84  Aligned_cols=232  Identities=28%  Similarity=0.458  Sum_probs=184.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||||++......    .....+.+|+.++++++||||+++++++...+..++||||+++ +|.+++...  .+++.
T Consensus        26 ~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~  100 (324)
T 3mtl_A           26 TDNLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMH  100 (324)
T ss_dssp             TCCEEEEEEECC----------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHH
T ss_pred             CCcEEEEEEEeccccc----ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHH
Confidence            4789999999654321    1112345799999999999999999999999999999999986 888888764  38999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+......  ......++..|+|||.+.+.. .++
T Consensus       101 ~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~  179 (324)
T 3mtl_A          101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST-DYS  179 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCC-CCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCC-CCC
Confidence            99999999999999999999999999999999999999999999998654422  223445789999999986533 378


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC---CC-C-------------------------CCCCcCCHHHH
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG---EL-P-------------------------SVPSSLSRDAR  207 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~---~~-~-------------------------~~~~~~~~~~~  207 (247)
                      .++||||+|+++|+|++|..||......+....+...   .. .                         .....+++++.
T Consensus       180 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (324)
T 3mtl_A          180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGA  259 (324)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHH
Confidence            9999999999999999999999887766655443221   00 0                         01135788999


Q ss_pred             HHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          208 DFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       208 ~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      ++|.+||+.||.+|||++|+++||||+....
T Consensus       260 ~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          260 DLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             HHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            9999999999999999999999999987644


No 104
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.8e-45  Score=299.79  Aligned_cols=223  Identities=26%  Similarity=0.486  Sum_probs=194.7

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH------   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------   74 (247)
                      |..||||++...    ......+.+.+|+.+++.+ +||||+++++++.+.+..++||||+++|+|.+++...+      
T Consensus       113 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~  188 (370)
T 2psq_A          113 AVTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY  188 (370)
T ss_dssp             EEEEEEEECCTT----CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC----
T ss_pred             ceeEEEEEecCC----cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccc
Confidence            456999998643    2345677899999999999 89999999999999999999999999999999997642      


Q ss_pred             -----------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCC
Q 041080           75 -----------LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGT  139 (247)
Q Consensus        75 -----------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~  139 (247)
                                 +++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......    .....++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t  268 (370)
T 2psq_A          189 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP  268 (370)
T ss_dssp             -------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSC
T ss_pred             cccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcc
Confidence                       7889999999999999999999999999999999999999999999999987544322    2233456


Q ss_pred             CCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCC
Q 041080          140 PFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNP  218 (247)
Q Consensus       140 ~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (247)
                      +.|+|||.+.+..  ++.++||||||+++|+|++ |..||...........+..+..+..+..+++++.+++.+||..+|
T Consensus       269 ~~y~aPE~~~~~~--~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  346 (370)
T 2psq_A          269 VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVP  346 (370)
T ss_dssp             GGGCCHHHHHTCC--CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSG
T ss_pred             cceECHhHhcCCC--CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            7899999996544  8999999999999999999 999999888888877777777777888999999999999999999


Q ss_pred             CCCCChhhhhcC
Q 041080          219 NDRPTVTELMEH  230 (247)
Q Consensus       219 ~~Rps~~~il~~  230 (247)
                      .+|||+++++++
T Consensus       347 ~~Rpt~~ell~~  358 (370)
T 2psq_A          347 SQRPTFKQLVED  358 (370)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999863


No 105
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=7.9e-46  Score=298.70  Aligned_cols=224  Identities=31%  Similarity=0.503  Sum_probs=186.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++......         ..+|+.++.++ +||||+++++++.+++..++||||+++++|.+.+.+. .+++.
T Consensus        46 ~~~~~avK~~~~~~~~---------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~  116 (342)
T 2qr7_A           46 TNMEFAVKIIDKSKRD---------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSER  116 (342)
T ss_dssp             TTEEEEEEEEETTTCC---------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHH
T ss_pred             CCCEEEEEEEEcccCC---------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHH
Confidence            4789999999764321         24688888888 7999999999999999999999999999999988665 48999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC----CCeEEcccccccccCcc--ccccCCCCCCccCCcccccCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS----GSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~----~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~  152 (247)
                      .+..++.|++.||.|||++|++|+||||+||++..+    +.++|+|||.+......  ......+++.|+|||.+.+..
T Consensus       117 ~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  196 (342)
T 2qr7_A          117 EASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG  196 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCC
Confidence            999999999999999999999999999999998543    24999999998754332  234456899999999986544


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCC---hhhHHHHHhhcCCCC---CCCCcCCHHHHHHHHHHhcCCCCCCCChhh
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHL---EGVQALFRIGKGELP---SVPSSLSRDARDFILKCLQVNPNDRPTVTE  226 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  226 (247)
                        ++.++|+||||+++|+|++|..||...   ........+..+...   .....++++++++|.+||..||.+|||+++
T Consensus       197 --~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~  274 (342)
T 2qr7_A          197 --YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAAL  274 (342)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             --CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence              688999999999999999999999753   334444555444432   223578999999999999999999999999


Q ss_pred             hhcCccCCC
Q 041080          227 LMEHPFVKR  235 (247)
Q Consensus       227 il~~p~~~~  235 (247)
                      +++||||..
T Consensus       275 il~hp~~~~  283 (342)
T 2qr7_A          275 VLRHPWIVH  283 (342)
T ss_dssp             HTTSHHHHT
T ss_pred             HhcCCeecC
Confidence            999999965


No 106
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.6e-45  Score=296.13  Aligned_cols=231  Identities=26%  Similarity=0.494  Sum_probs=187.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCC--CceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQ--DNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~   77 (247)
                      +|+.||||++....   ......+.+.+|+.++++++|  +||+++++++..++..++|||+. +++|.+++... .+++
T Consensus        32 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~  107 (343)
T 3dbq_A           32 KKQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDP  107 (343)
T ss_dssp             TSCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHSCCCCH
T ss_pred             CCCEEEEEEeeccc---cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCC-CCCHHHHHHhcCCCCH
Confidence            47889999997653   345566788999999999976  99999999999999999999955 66999998775 4899


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCccccc---
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNS---  150 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~---  150 (247)
                      ..++.++.|++.||.|||+.||+|+||||+||+++ ++.++|+|||++.......    .....|++.|+|||.+.+   
T Consensus       108 ~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  186 (343)
T 3dbq_A          108 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS  186 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccc
Confidence            99999999999999999999999999999999996 6789999999987654332    224568999999999854   


Q ss_pred             ------CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh-HHHHH-hhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC
Q 041080          151 ------KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV-QALFR-IGKGELPSVPSSLSRDARDFILKCLQVNPNDRP  222 (247)
Q Consensus       151 ------~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (247)
                            ....++.++||||||+++|+|++|..||...... ..... +........+...+.++.+++.+||..+|.+||
T Consensus       187 ~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rp  266 (343)
T 3dbq_A          187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI  266 (343)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSC
T ss_pred             cccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCC
Confidence                  1234788999999999999999999999764332 22222 222334456677889999999999999999999


Q ss_pred             ChhhhhcCccCCCC
Q 041080          223 TVTELMEHPFVKRP  236 (247)
Q Consensus       223 s~~~il~~p~~~~~  236 (247)
                      |++++++||||+..
T Consensus       267 t~~e~l~hp~~~~~  280 (343)
T 3dbq_A          267 SIPELLAHPYVQIQ  280 (343)
T ss_dssp             CHHHHHTSHHHHSC
T ss_pred             CHHHHHhCcccccc
Confidence            99999999999853


No 107
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.5e-45  Score=292.49  Aligned_cols=232  Identities=35%  Similarity=0.654  Sum_probs=191.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||+|++....     ....+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++..  ..+++.
T Consensus        43 ~~~~~aiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~  117 (302)
T 2j7t_A           43 TGALAAAKVIETKS-----EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP  117 (302)
T ss_dssp             TCCEEEEEEEC---------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHH
T ss_pred             CCcEEEEEEecCCC-----HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHH
Confidence            47889999986532     22356788999999999999999999999999999999999999999998865  459999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc--cccccCCCCCCccCCccccc---CCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM--NDLKSCKGTPFWMAPEVVNS---KND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~--~~~~~~~~~~~~~aPE~~~~---~~~  153 (247)
                      .++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.....  .......++..|+|||.+..   ...
T Consensus       118 ~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  197 (302)
T 2j7t_A          118 QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT  197 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTST
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCC
Confidence            9999999999999999999999999999999999999999999998643221  12233458899999999841   223


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC--CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCc
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS--VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p  231 (247)
                      .++.++|+||||+++++|++|..||...........+.....+.  .+..++..+.+++.+||..+|.+|||++++++||
T Consensus       198 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~  277 (302)
T 2j7t_A          198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP  277 (302)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred             CCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence            37889999999999999999999998877766665555544332  3467899999999999999999999999999999


Q ss_pred             cCCCCC
Q 041080          232 FVKRPL  237 (247)
Q Consensus       232 ~~~~~~  237 (247)
                      ||+...
T Consensus       278 ~~~~~~  283 (302)
T 2j7t_A          278 FVSSIT  283 (302)
T ss_dssp             TTTTCC
T ss_pred             HHhhhc
Confidence            999754


No 108
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=4.1e-46  Score=313.76  Aligned_cols=231  Identities=28%  Similarity=0.480  Sum_probs=198.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++......  .....+.+.+|+.++++++||||+++++++.+.+..++||||+.+++|.+.+... .+++..
T Consensus        50 ~~~~~avK~~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  127 (484)
T 3nyv_A           50 TGQECAVKVISKRQVK--QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD  127 (484)
T ss_dssp             TCCEEEEEEEETTTCC--BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHH
T ss_pred             CCCEEEEEEEEhhhcc--cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHH
Confidence            4789999999765432  2234567889999999999999999999999999999999999999998887654 599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE---cCCCCeEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILV---DASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~---~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.|||++|++|+||||+||++   +.++.++|+|||++...... ......|++.|+|||.+.+   .+
T Consensus       128 ~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~  204 (484)
T 3nyv_A          128 AARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG---TY  204 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT---CC
T ss_pred             HHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC---CC
Confidence            99999999999999999999999999999999   56789999999998654432 2334568999999999865   27


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++||||+|+++|+|++|..||...........+..+.....   ...++++++++|.+||..+|.+|||++++++|||
T Consensus       205 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~  284 (484)
T 3nyv_A          205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW  284 (484)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred             CCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence            8899999999999999999999999888888777766654322   2468999999999999999999999999999999


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      |+..
T Consensus       285 ~~~~  288 (484)
T 3nyv_A          285 IQTY  288 (484)
T ss_dssp             HHHH
T ss_pred             hccc
Confidence            9864


No 109
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=2.6e-45  Score=297.98  Aligned_cols=224  Identities=28%  Similarity=0.415  Sum_probs=186.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-----CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC-
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-----QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH-   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-   74 (247)
                      +|+.||||++..      .......+..|+.+++.+.     ||||+++++++...+..++||||+ +++|.+++.... 
T Consensus        59 ~~~~vavK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~  131 (360)
T 3llt_A           59 NKKYYAVKVVRN------IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY  131 (360)
T ss_dssp             TCCEEEEEEECS------CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT
T ss_pred             CCeEEEEEEecc------chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCC
Confidence            478899999963      2344556778999999996     999999999999999999999999 889999998754 


Q ss_pred             --CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC-------------------------CCCeEEcccccccc
Q 041080           75 --LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA-------------------------SGSVKLADFGLAKA  127 (247)
Q Consensus        75 --~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~-------------------------~~~~~l~df~~~~~  127 (247)
                        +++..++.++.|++.||.|||+.||+|+||||+||+++.                         ++.++|+|||.+..
T Consensus       132 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~  211 (360)
T 3llt_A          132 NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF  211 (360)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCcee
Confidence              899999999999999999999999999999999999975                         78899999999875


Q ss_pred             cCccccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC-----------
Q 041080          128 TTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP-----------  196 (247)
Q Consensus       128 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------  196 (247)
                      ... ......+++.|+|||.+.+..  ++.++||||||+++|+|++|..||......+....+.....+           
T Consensus       212 ~~~-~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  288 (360)
T 3llt_A          212 KSD-YHGSIINTRQYRAPEVILNLG--WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATK  288 (360)
T ss_dssp             TTS-CCCSCCSCGGGCCHHHHTTCC--CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTT
T ss_pred             cCC-CCcCccCcccccCcHHHcCCC--CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhh
Confidence            433 234456899999999997554  889999999999999999999999877665554433221110           


Q ss_pred             ----------------------------------CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCC
Q 041080          197 ----------------------------------SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVK  234 (247)
Q Consensus       197 ----------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~  234 (247)
                                                        ..+...++.+.++|.+||+.||.+|||++++|+||||+
T Consensus       289 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          289 TNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             SGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             ccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                                              00011247788999999999999999999999999996


No 110
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.4e-45  Score=295.88  Aligned_cols=231  Identities=27%  Similarity=0.463  Sum_probs=193.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeecCCcEEEEEeccccCcHHHHHHh---cCCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK---YHLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~   76 (247)
                      +|+.||||++......   ......+.+|+.++..+. ||||+++++++...+..++||||+.+++|.+++..   ..++
T Consensus        53 ~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~  129 (327)
T 3lm5_A           53 TGQEYAAKFLKKRRRG---QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVS  129 (327)
T ss_dssp             TCCEEEEEEEESEETT---EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCC
T ss_pred             CCCEEEEEEEehhhcc---hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCC
Confidence            4889999999765432   223456889999999995 69999999999999999999999999999998754   3589


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC---CCCeEEcccccccccCccc-cccCCCCCCccCCcccccCC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA---SGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~---~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~  152 (247)
                      +..++.++.|++.||.+||+.|++|+||||+||+++.   ++.++|+|||.+....... .....+++.|+|||.+.+..
T Consensus       130 ~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  209 (327)
T 3lm5_A          130 ENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDP  209 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCC
Confidence            9999999999999999999999999999999999987   7899999999987654332 33456899999999996544


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC---CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE---LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                        ++.++|+||||+++|+|++|..||...........+....   .......+++.+.+++.+||+.+|.+|||++++++
T Consensus       210 --~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          210 --ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             --CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             --CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence              7899999999999999999999998887776665544432   23334578999999999999999999999999999


Q ss_pred             CccCCCC
Q 041080          230 HPFVKRP  236 (247)
Q Consensus       230 ~p~~~~~  236 (247)
                      ||||+..
T Consensus       288 h~~~~~~  294 (327)
T 3lm5_A          288 HSWLQQW  294 (327)
T ss_dssp             CGGGCCC
T ss_pred             CHhhccc
Confidence            9999874


No 111
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=7.4e-46  Score=301.57  Aligned_cols=231  Identities=29%  Similarity=0.444  Sum_probs=178.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC------CcEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE------NRLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++....   ......+.+.+|+.+++.++||||+++++++...      ...++++|++ +++|.++++...
T Consensus        53 ~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~  128 (367)
T 2fst_X           53 TGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK  128 (367)
T ss_dssp             TTEEEEEEECSSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----CC
T ss_pred             CCCEEEEEEeCccc---cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcCC
Confidence            47899999986542   2345567788999999999999999999998654      5689999999 569999998888


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++...... .....++.+|+|||.+.+.. .
T Consensus       129 l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-~~~~~~t~~y~aPE~~~~~~-~  206 (367)
T 2fst_X          129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-MTGYVATRWYRAPEIMLNWM-H  206 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC----------------CCCTTCCHHHHTTCC-S
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc-CCCcCcCcCccChHHHcCCc-C
Confidence            999999999999999999999999999999999999999999999999998764432 34456899999999986532 3


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC----------------------CCCC--------CCCcCCH
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG----------------------ELPS--------VPSSLSR  204 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~----------------------~~~~--------~~~~~~~  204 (247)
                      ++.++||||+|+++++|++|..||...+.......+...                      ..+.        .....++
T Consensus       207 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (367)
T 2fst_X          207 YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANP  286 (367)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCH
Confidence            789999999999999999999999877665544332210                      0000        1135688


Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      ++.+||.+||..||.+|||++++++||||+...
T Consensus       287 ~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          287 LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence            999999999999999999999999999999753


No 112
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=4.6e-45  Score=291.27  Aligned_cols=227  Identities=37%  Similarity=0.694  Sum_probs=194.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||||.+....       ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++..  ..+++.
T Consensus        53 ~~~~vaiK~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  125 (314)
T 3com_A           53 TGQIVAIKQVPVES-------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED  125 (314)
T ss_dssp             TCCEEEEEEEETTS-------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHH
T ss_pred             CCCEEEEEecCchH-------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHH
Confidence            48899999997532       234578999999999999999999999999999999999999999999863  459999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......  ......++..|+|||.+.+..  ++
T Consensus       126 ~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  203 (314)
T 3com_A          126 EIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG--YN  203 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSC--BC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCC--CC
Confidence            99999999999999999999999999999999999999999999998654432  223445888999999986544  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC--CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCC
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS--VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVK  234 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~  234 (247)
                      .++|+||||+++|+|++|..||...........+.....+.  .+..++..+.+++.+||..+|.+|||++++++||||+
T Consensus       204 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~  283 (314)
T 3com_A          204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVR  283 (314)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence            89999999999999999999998876665554444433322  3456899999999999999999999999999999999


Q ss_pred             CC
Q 041080          235 RP  236 (247)
Q Consensus       235 ~~  236 (247)
                      ..
T Consensus       284 ~~  285 (314)
T 3com_A          284 SA  285 (314)
T ss_dssp             TC
T ss_pred             cC
Confidence            75


No 113
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1e-44  Score=301.00  Aligned_cols=232  Identities=28%  Similarity=0.429  Sum_probs=181.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC-----CcEEEEEeccccCcHHHHHHhcC-
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE-----NRLYIFLELVTKGSLANLYQKYH-   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~-   74 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++...     +..++||||+.+ +|.++++... 
T Consensus        50 ~~~~vAiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~  125 (432)
T 3n9x_A           50 TEKNVAIKKVNRMF---EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIF  125 (432)
T ss_dssp             TTEEEEEEEECSTT---TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHHSSCC
T ss_pred             CCcEEEEEEeCchh---cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHhccCC
Confidence            47889999997532   3445567889999999999999999999998766     579999999975 9999987754 


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----------------------
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----------------------  132 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----------------------  132 (247)
                      +++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.......                      
T Consensus       126 l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (432)
T 3n9x_A          126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK  205 (432)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--------------------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchh
Confidence            9999999999999999999999999999999999999999999999999987544321                      


Q ss_pred             --cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCC-----------CCChh----------------
Q 041080          133 --LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPY-----------SHLEG----------------  183 (247)
Q Consensus       133 --~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~-----------~~~~~----------------  183 (247)
                        .....++++|+|||.+.... .++.++||||+||++|+|++|..||           .....                
T Consensus       206 ~~~~~~~gt~~Y~APE~~~~~~-~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~  284 (432)
T 3n9x_A          206 KQLTSHVVTRWYRAPELILLQE-NYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKS  284 (432)
T ss_dssp             -----CCCCCTTCCHHHHTTCS-CCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHH
T ss_pred             ccccCCCCCccccCHHHHhcCC-CCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccc
Confidence              24566899999999864332 3799999999999999999854443           22210                


Q ss_pred             -hHHH------------------------HHhhcCCC-CC-----CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          184 -VQAL------------------------FRIGKGEL-PS-----VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       184 -~~~~------------------------~~~~~~~~-~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                       ....                        ..+..... ..     ....+++++.+||.+||..||.+|||++|+|+|||
T Consensus       285 ~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  364 (432)
T 3n9x_A          285 NRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPY  364 (432)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGG
T ss_pred             hHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChh
Confidence             0000                        00100000 00     11457999999999999999999999999999999


Q ss_pred             CCCCC
Q 041080          233 VKRPL  237 (247)
Q Consensus       233 ~~~~~  237 (247)
                      |+...
T Consensus       365 f~~~~  369 (432)
T 3n9x_A          365 LKDVR  369 (432)
T ss_dssp             GTTTC
T ss_pred             hhhcc
Confidence            99864


No 114
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=2.2e-45  Score=307.38  Aligned_cols=232  Identities=28%  Similarity=0.474  Sum_probs=178.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec-----CCcEEEEEeccccCcHHHHHHhcC-
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD-----ENRLYIFLELVTKGSLANLYQKYH-   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~-   74 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++..     ....++||||+. ++|.+++.... 
T Consensus        77 ~~~~vaiK~i~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~  152 (458)
T 3rp9_A           77 EKRVVAIKKILRVF---EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVY  152 (458)
T ss_dssp             --CEEEEEEECSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCC
T ss_pred             CCcEEEEEEechhh---cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCC
Confidence            47899999996532   344556788999999999999999999999843     357999999985 58999887654 


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc-----------------------
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN-----------------------  131 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~-----------------------  131 (247)
                      +++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++......                       
T Consensus       153 l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (458)
T 3rp9_A          153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH  232 (458)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccc
Confidence            999999999999999999999999999999999999999999999999998754321                       


Q ss_pred             ------ccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-----------CCCCCCCChh-----------
Q 041080          132 ------DLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-----------RRPPYSHLEG-----------  183 (247)
Q Consensus       132 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-----------g~~p~~~~~~-----------  183 (247)
                            ......|+++|+|||.+... ..++.++|||||||++|+|++           |..+|.....           
T Consensus       233 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~  311 (458)
T 3rp9_A          233 TKNLKRQLTGHVVTRWYRAPELILLQ-ENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGN  311 (458)
T ss_dssp             ------------CCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC---------------
T ss_pred             cccccccccCCcccccccChHHhhCC-CCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccc
Confidence                  12344579999999986432 237999999999999999998           5555544321           


Q ss_pred             ---------hHHHHHhh-----------------------c-------CCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh
Q 041080          184 ---------VQALFRIG-----------------------K-------GELPSVPSSLSRDARDFILKCLQVNPNDRPTV  224 (247)
Q Consensus       184 ---------~~~~~~~~-----------------------~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (247)
                               .+....+.                       .       ..........++++.+||.+||..||.+|||+
T Consensus       312 ~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~  391 (458)
T 3rp9_A          312 DFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITI  391 (458)
T ss_dssp             -----CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             cccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCH
Confidence                     01110000                       0       00011123568999999999999999999999


Q ss_pred             hhhhcCccCCCCC
Q 041080          225 TELMEHPFVKRPL  237 (247)
Q Consensus       225 ~~il~~p~~~~~~  237 (247)
                      +|+|+||||+...
T Consensus       392 ~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          392 NECLAHPFFKEVR  404 (458)
T ss_dssp             HHHHHSGGGTTTC
T ss_pred             HHHhcCHhhhhcC
Confidence            9999999999863


No 115
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=2.9e-45  Score=289.16  Aligned_cols=231  Identities=29%  Similarity=0.488  Sum_probs=176.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-----cCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-----YHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~   75 (247)
                      +|+.||||++....   ......+.+.++...++.++||||+++++++.+++..++||||+++ +|.+++..     ..+
T Consensus        31 ~~~~vavK~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~  106 (290)
T 3fme_A           31 SGQIMAVKRIRATV---NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTI  106 (290)
T ss_dssp             TTEEEEEEEEC------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCC
T ss_pred             CCeEEEEEEeeccc---CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCC
Confidence            47899999997542   2233344455566668888999999999999999999999999986 88777654     359


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCcEEEcCCCCeEEcccccccccCcccc-ccCCCCCCccCCccccc--C
Q 041080           76 SDSQVSSYTRQILNGLVYLHER-NVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL-KSCKGTPFWMAPEVVNS--K  151 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~aPE~~~~--~  151 (247)
                      ++..++.++.|++.||.+||++ |++|+||||+||+++.++.++|+|||.+........ ....+++.|+|||.+..  .
T Consensus       107 ~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  186 (290)
T 3fme_A          107 PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELN  186 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCCTT
T ss_pred             CHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhc
Confidence            9999999999999999999998 999999999999999999999999999865543332 23458899999999732  2


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCCh-hhHHHHH-hhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLE-GVQALFR-IGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ...++.++|+||+|++++++++|..||.... ....... ............+++++.+++.+||+.+|.+|||++++++
T Consensus       187 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             C--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            2337889999999999999999999997532 2222333 3333333334578999999999999999999999999999


Q ss_pred             CccCCC
Q 041080          230 HPFVKR  235 (247)
Q Consensus       230 ~p~~~~  235 (247)
                      ||||+.
T Consensus       267 hp~f~~  272 (290)
T 3fme_A          267 HPFFTL  272 (290)
T ss_dssp             SHHHHH
T ss_pred             Cccccc
Confidence            999985


No 116
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=4.9e-45  Score=289.13  Aligned_cols=232  Identities=33%  Similarity=0.554  Sum_probs=188.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc---CCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY---HLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~   77 (247)
                      +|+.||||++.....   .....+.+.+|+.++++++||||+++++++..++..++||||+.+ +|.+++...   .+++
T Consensus        27 ~~~~vavK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~  102 (299)
T 2r3i_A           27 TGEVVALKKIRLDTE---TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL  102 (299)
T ss_dssp             TCCEEEEEEC-----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCH
T ss_pred             CCceEEEEEeecCcc---chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcccC-CHHHHHHhhhccCCCH
Confidence            478999999975432   222345677999999999999999999999999999999999985 999998764   4889


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCcccccCCCCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+......  ......++..|+|||.+.+... +
T Consensus       103 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~  181 (299)
T 2r3i_A          103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGAKY-Y  181 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTSCBCCCTTCCHHHHTTCSS-C
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCcccccccccCcHHhhcccc-C
Confidence            999999999999999999999999999999999999999999999998654322  2334457899999999865432 6


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC--C---------------CCCC-----------CCcCCHHHH
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG--E---------------LPSV-----------PSSLSRDAR  207 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~--~---------------~~~~-----------~~~~~~~~~  207 (247)
                      +.++|+||||+++|+|++|..||......+....+...  .               .+.+           ...++++++
T Consensus       182 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (299)
T 2r3i_A          182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGR  261 (299)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHH
T ss_pred             ChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHH
Confidence            88999999999999999999999887765554433211  0               0011           124789999


Q ss_pred             HHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          208 DFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       208 ~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      +++.+||+.||.+|||++++++||||+...
T Consensus       262 ~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~  291 (299)
T 2r3i_A          262 SLLSQMLHYDPNKRISAKAALAHPFFQDVT  291 (299)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHHHHhcCcCcccCCCHHHHhcChhhhcCC
Confidence            999999999999999999999999999753


No 117
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.7e-46  Score=300.81  Aligned_cols=234  Identities=28%  Similarity=0.427  Sum_probs=191.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      +|+.||||++...... ......+.+.+|+.+++++ +||||+++++++...+..++||||+++++|.+++... .+++.
T Consensus        81 ~~~~vavK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  159 (355)
T 1vzo_A           81 TGKLYAMKVLKKATIV-QKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH  159 (355)
T ss_dssp             TTCEEEEEEESEEEEE-EEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHH
T ss_pred             CCeEEEEEEEeHHHhh-hhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHH
Confidence            4789999999754321 1112233466899999999 6999999999999999999999999999999998764 59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc---ccccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN---DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......   ......|++.|+|||.+.+....+
T Consensus       160 ~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  239 (355)
T 1vzo_A          160 EVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH  239 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCC
Confidence            99999999999999999999999999999999999999999999998654322   223346899999999997655557


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChh----hHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC-----Chhh
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEG----VQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRP-----TVTE  226 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----s~~~  226 (247)
                      +.++||||||+++|+|++|..||.....    ......+.. ..+..+..++..++++|.+||..||.+||     |+++
T Consensus       240 ~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~e  318 (355)
T 1vzo_A          240 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADE  318 (355)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH-CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHH
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc-cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHH
Confidence            8899999999999999999999964332    222222222 34566778999999999999999999999     9999


Q ss_pred             hhcCccCCCC
Q 041080          227 LMEHPFVKRP  236 (247)
Q Consensus       227 il~~p~~~~~  236 (247)
                      +++||||+..
T Consensus       319 ll~h~~f~~~  328 (355)
T 1vzo_A          319 IKEHLFFQKI  328 (355)
T ss_dssp             HHTSGGGTTC
T ss_pred             HHcCcchhcC
Confidence            9999999864


No 118
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=2.4e-45  Score=301.78  Aligned_cols=225  Identities=29%  Similarity=0.472  Sum_probs=179.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeec----CCcEEEEEeccccCcHHHHHHhc--
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKD----ENRLYIFLELVTKGSLANLYQKY--   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~--   73 (247)
                      +|+.||||++...          ..+.+|+.++.++ +||||+++++++..    .+.+++||||+++|+|.+++...  
T Consensus        86 ~~~~vAiK~~~~~----------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~  155 (400)
T 1nxk_A           86 TQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD  155 (400)
T ss_dssp             TCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC--
T ss_pred             CCCEEEEEEeCcc----------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCC
Confidence            4789999998631          2456788887554 79999999998765    56789999999999999999764  


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC---CCCeEEcccccccccCcc-ccccCCCCCCccCCccc
Q 041080           74 -HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA---SGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVV  148 (247)
Q Consensus        74 -~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~---~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~  148 (247)
                       .+++..++.++.|++.||.|||+.||+|+||||+||+++.   ++.++|+|||++...... ......+++.|+|||.+
T Consensus       156 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  235 (400)
T 1nxk_A          156 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL  235 (400)
T ss_dssp             -CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhc
Confidence             3899999999999999999999999999999999999997   788999999998755432 23445689999999999


Q ss_pred             ccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhH----HHHHhhcCCCC---CCCCcCCHHHHHHHHHHhcCCCCCC
Q 041080          149 NSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQ----ALFRIGKGELP---SVPSSLSRDARDFILKCLQVNPNDR  221 (247)
Q Consensus       149 ~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R  221 (247)
                      .+..  ++.++||||||+++|+|++|..||.......    ....+..+...   .....++++++++|.+||..||.+|
T Consensus       236 ~~~~--~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  313 (400)
T 1nxk_A          236 GPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR  313 (400)
T ss_dssp             CCCC--SSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCC--CCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHC
Confidence            6544  8899999999999999999999997654322    22222222221   1225689999999999999999999


Q ss_pred             CChhhhhcCccCCCCC
Q 041080          222 PTVTELMEHPFVKRPL  237 (247)
Q Consensus       222 ps~~~il~~p~~~~~~  237 (247)
                      ||++++++||||....
T Consensus       314 pt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          314 MTITEFMNHPWIMQST  329 (400)
T ss_dssp             CCHHHHHHSHHHHTTT
T ss_pred             cCHHHHhcCccccCCC
Confidence            9999999999998653


No 119
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=4e-45  Score=295.94  Aligned_cols=231  Identities=28%  Similarity=0.478  Sum_probs=186.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec--------CCcEEEEEeccccCcHHHHHHh
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD--------ENRLYIFLELVTKGSLANLYQK   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~~~~~L~~~l~~   72 (247)
                      +|+.||||++.......   .....+.+|+.+++.++||||+++++++..        .+..++||||+.+ +|.+.+..
T Consensus        41 ~~~~vaiK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~  116 (351)
T 3mi9_A           41 TGQKVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSN  116 (351)
T ss_dssp             TCCEEEEEECCCSSCSS---SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHC
T ss_pred             CCCEEEEEEEecccccc---cchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhh
Confidence            47899999997654322   223456789999999999999999999876        4568999999987 77777655


Q ss_pred             c--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc------cccccCCCCCCccC
Q 041080           73 Y--HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM------NDLKSCKGTPFWMA  144 (247)
Q Consensus        73 ~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~------~~~~~~~~~~~~~a  144 (247)
                      .  .+++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.....      .......+++.|+|
T Consensus       117 ~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a  196 (351)
T 3mi9_A          117 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP  196 (351)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCC
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccC
Confidence            3  599999999999999999999999999999999999999999999999999865431      12234557899999


Q ss_pred             CcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC---CCCCCCCc--------------------
Q 041080          145 PEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG---ELPSVPSS--------------------  201 (247)
Q Consensus       145 PE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~--------------------  201 (247)
                      ||.+.+.. .++.++||||||+++|+|++|..||...........+...   ..+.....                    
T Consensus       197 PE~~~~~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (351)
T 3mi9_A          197 PELLLGER-DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKV  275 (351)
T ss_dssp             HHHHTTCC-SCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCH
T ss_pred             chhhcCCC-CCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCH
Confidence            99986533 2689999999999999999999999887766655443321   11111111                    


Q ss_pred             --------CCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          202 --------LSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       202 --------~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                              .++++.++|.+||..||.+|||++|+++||||+..
T Consensus       276 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          276 KDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             HHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             HHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence                    27789999999999999999999999999999874


No 120
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=3.3e-45  Score=290.92  Aligned_cols=235  Identities=24%  Similarity=0.451  Sum_probs=194.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceee--ecCCcEEEEEeccccCcHHHHHHh---cCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTD--KDENRLYIFLELVTKGSLANLYQK---YHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--~~~~~~~lv~e~~~~~~L~~~l~~---~~~   75 (247)
                      +|+.||+|++...... ......+.+.+|+.++++++||||+++++++  ...+..++||||+.++ |.+++..   ..+
T Consensus        29 ~~~~~avK~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~  106 (305)
T 2wtk_C           29 TLCRRAVKILKKKKLR-RIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRF  106 (305)
T ss_dssp             TCCEEEEEEECHHHHH-HSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSC
T ss_pred             CCcEEEEEEecccccc-ccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCccccc
Confidence            4788999999754321 1123456789999999999999999999988  4556899999999885 7776654   358


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc----ccccCCCCCCccCCcccccC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN----DLKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~  151 (247)
                      ++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+......    ......++..|+|||.+.+.
T Consensus       107 ~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  186 (305)
T 2wtk_C          107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL  186 (305)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCc
Confidence            99999999999999999999999999999999999999999999999998654321    22344588999999998764


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCc
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p  231 (247)
                      ....+.++|+||||+++|+|++|..||...........+..... ..+..+++.+.+++.+||..||.+|||++++++||
T Consensus       187 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  265 (305)
T 2wtk_C          187 DTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY-AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS  265 (305)
T ss_dssp             SCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC-CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred             ccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC-CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence            43357899999999999999999999998777776666655543 55678899999999999999999999999999999


Q ss_pred             cCCCCCC
Q 041080          232 FVKRPLQ  238 (247)
Q Consensus       232 ~~~~~~~  238 (247)
                      ||+....
T Consensus       266 ~~~~~~~  272 (305)
T 2wtk_C          266 WFRKKHP  272 (305)
T ss_dssp             HHHSCCC
T ss_pred             ccccCCC
Confidence            9987644


No 121
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=7.9e-45  Score=297.85  Aligned_cols=230  Identities=26%  Similarity=0.485  Sum_probs=187.8

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC--CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE--QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~   78 (247)
                      |+.||||++....   ......+.+.+|+.+++++.  ||||+++++++...+..++|||+ .+++|.+++... .+++.
T Consensus        80 ~~~vaiK~~~~~~---~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~-~~~~L~~~l~~~~~~~~~  155 (390)
T 2zmd_A           80 KQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPW  155 (390)
T ss_dssp             CCEEEEEEEECTT---CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEEC-CSEEHHHHHHHCSSCCHH
T ss_pred             CCEEEEEEEeccc---ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEec-CCCCHHHHHHhcCCCCHH
Confidence            7789999997653   23556778999999999996  59999999999999999999995 567999998765 48899


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccC---
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSK---  151 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~---  151 (247)
                      .++.++.|++.||.|||+.||+|+||||+||+++ ++.++|+|||++.......    .....|++.|+|||.+.+.   
T Consensus       156 ~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  234 (390)
T 2zmd_A          156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS  234 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC---
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhcccc
Confidence            9999999999999999999999999999999995 6899999999987654332    2345689999999998642   


Q ss_pred             ------CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh-HHHHHhhc-CCCCCCCCcCCHHHHHHHHHHhcCCCCCCCC
Q 041080          152 ------NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV-QALFRIGK-GELPSVPSSLSRDARDFILKCLQVNPNDRPT  223 (247)
Q Consensus       152 ------~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  223 (247)
                            ...++.++||||||+++|+|++|..||...... .....+.. ......+...+.++.++|.+||+.+|.+|||
T Consensus       235 ~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  314 (390)
T 2zmd_A          235 RENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS  314 (390)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             ccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCC
Confidence                  124788999999999999999999999765332 23333332 2233456667899999999999999999999


Q ss_pred             hhhhhcCccCCCC
Q 041080          224 VTELMEHPFVKRP  236 (247)
Q Consensus       224 ~~~il~~p~~~~~  236 (247)
                      ++++++||||+..
T Consensus       315 ~~ell~hp~~~~~  327 (390)
T 2zmd_A          315 IPELLAHPYVQIQ  327 (390)
T ss_dssp             HHHHHTSHHHHSC
T ss_pred             HHHHhhCcCcccc
Confidence            9999999999854


No 122
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=5.5e-46  Score=300.61  Aligned_cols=234  Identities=26%  Similarity=0.471  Sum_probs=196.7

Q ss_pred             CCceEEEEEEeecCCCccc------------hHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQG------------KQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLAN   68 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   68 (247)
                      +|+.||||++.........            ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+
T Consensus        53 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  132 (348)
T 2pml_X           53 DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILK  132 (348)
T ss_dssp             TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSE
T ss_pred             CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHH
Confidence            5789999999764322111            1122678899999999999999999999999999999999999999998


Q ss_pred             H------HHh---cCCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCC
Q 041080           69 L------YQK---YHLSDSQVSSYTRQILNGLVYLHE-RNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKG  138 (247)
Q Consensus        69 ~------l~~---~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~  138 (247)
                      +      +..   ..+++..++.++.|++.||.+||+ .|++|+||+|+||+++.++.++|+|||.+............+
T Consensus       133 ~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  212 (348)
T 2pml_X          133 FDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG  212 (348)
T ss_dssp             ESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCS
T ss_pred             HHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCC
Confidence            8      554   459999999999999999999999 999999999999999999999999999987665555556678


Q ss_pred             CCCccCCcccccCCCCCCc-chhHHHHHHHHHHHHhCCCCCCCChh-hHHHHHhhcCCCCCCC-----------------
Q 041080          139 TPFWMAPEVVNSKNDGYGL-TADIWSLGCTVLEMLTRRPPYSHLEG-VQALFRIGKGELPSVP-----------------  199 (247)
Q Consensus       139 ~~~~~aPE~~~~~~~~~~~-~~Di~slG~ll~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~-----------------  199 (247)
                      +..|+|||.+.+... ++. ++|+||||+++++|++|..||..... ......+..... ..+                 
T Consensus       213 ~~~y~aPE~~~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~  290 (348)
T 2pml_X          213 TYEFMPPEFFSNESS-YNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI-EYPLDRNHFLYPLTNKKSTC  290 (348)
T ss_dssp             CGGGCCGGGGSSCCC-EEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCC-CCCCSSSSSTTTTCC-----
T ss_pred             CcCccCchhhcCCCC-CCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCc-CCccchhhhhcccccccccc
Confidence            999999999965422 444 89999999999999999999987766 555555544432 223                 


Q ss_pred             --CcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          200 --SSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       200 --~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                        ..++.++.+++.+||+.+|.+|||++++++||||+..
T Consensus       291 ~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          291 SNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             ---CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             chhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence              5689999999999999999999999999999999874


No 123
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=1.7e-45  Score=304.49  Aligned_cols=234  Identities=29%  Similarity=0.461  Sum_probs=180.8

Q ss_pred             CCceEEEEEEeecCCCc---cchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCC
Q 041080            1 DGFFFAVKEVSLQDQGA---QGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~   76 (247)
                      +|+.||||++.......   ........+.+|+.++++++||||+++++++.. +..++||||+++++|.+++... .++
T Consensus       159 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~  237 (419)
T 3i6u_A          159 TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLK  237 (419)
T ss_dssp             TCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSSCCCC
T ss_pred             CCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhccCCCC
Confidence            47899999998653221   122233457899999999999999999999865 4589999999999998877554 599


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC---CeEEcccccccccCccc-cccCCCCCCccCCccccc-C
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG---SVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNS-K  151 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~---~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~-~  151 (247)
                      +..++.++.|++.||.|||++|++|+||||+||+++.++   .++|+|||++....... .....|++.|+|||.+.+ .
T Consensus       238 ~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  317 (419)
T 3i6u_A          238 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG  317 (419)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCC
Confidence            999999999999999999999999999999999997654   59999999997655433 334568999999999854 2


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhH-HHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhh
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQ-ALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTEL  227 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~i  227 (247)
                      ...++.++|+||||+++|+|++|..||....... ....+........   ...+++.+.+++.+||..+|.+|||++++
T Consensus       318 ~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~  397 (419)
T 3i6u_A          318 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA  397 (419)
T ss_dssp             -CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHH
Confidence            3347889999999999999999999997654332 2333333333222   24689999999999999999999999999


Q ss_pred             hcCccCCC
Q 041080          228 MEHPFVKR  235 (247)
Q Consensus       228 l~~p~~~~  235 (247)
                      ++||||+.
T Consensus       398 l~hp~~~~  405 (419)
T 3i6u_A          398 LRHPWLQD  405 (419)
T ss_dssp             HHSGGGCC
T ss_pred             hCCcccCC
Confidence            99999985


No 124
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.8e-46  Score=306.65  Aligned_cols=225  Identities=18%  Similarity=0.232  Sum_probs=177.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHH---HHHhhcCCCceeeec-------eeeecCC-----------------c
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEI---SLLSQFEQDNIVQYL-------GTDKDEN-----------------R   53 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~~i~~~~-------~~~~~~~-----------------~   53 (247)
                      +|+.||||++.....  ......+.+.+|+   ..+++++||||++++       +++...+                 .
T Consensus        97 ~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  174 (377)
T 3byv_A           97 TGESFEVHVPYFTER--PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLS  174 (377)
T ss_dssp             CCCEEEEEEEEECC---CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEES
T ss_pred             CCcEEEEEEEeeccc--cchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEE
Confidence            488999999986532  2233566788999   555556899999998       5555543                 3


Q ss_pred             EEEEEeccccCcHHHHHHhc-CCCH-------HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccc
Q 041080           54 LYIFLELVTKGSLANLYQKY-HLSD-------SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLA  125 (247)
Q Consensus        54 ~~lv~e~~~~~~L~~~l~~~-~~~~-------~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~  125 (247)
                      .+++|||+ +|+|.++++.. .+++       ..++.++.|++.||+|||++||+|+||||+||+++.++.++|+|||++
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a  253 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL  253 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhh
Confidence            89999999 56999999763 2444       778889999999999999999999999999999999999999999998


Q ss_pred             cccCccccccCCCCCCccCCcccccC---------CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC
Q 041080          126 KATTMNDLKSCKGTPFWMAPEVVNSK---------NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP  196 (247)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~aPE~~~~~---------~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~  196 (247)
                      ..... ......| +.|+|||.+.+.         ...++.++||||||+++|+|++|..||...........+..    
T Consensus       254 ~~~~~-~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~----  327 (377)
T 3byv_A          254 VRDGA-RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR----  327 (377)
T ss_dssp             EETTC-EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS----
T ss_pred             eecCC-cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh----
Confidence            75443 2334456 999999998765         01378999999999999999999999976554433333222    


Q ss_pred             CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          197 SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       197 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                       ....+++++.++|.+||+.||.+|||++++++||||+.
T Consensus       328 -~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          328 -SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             -SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             -hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence             23578999999999999999999999999999999985


No 125
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=7.7e-46  Score=294.16  Aligned_cols=231  Identities=34%  Similarity=0.612  Sum_probs=177.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--------
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--------   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--------   72 (247)
                      +|+.||||++....    .....+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++..        
T Consensus        39 ~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  114 (303)
T 2vwi_A           39 KKEKVAIKRINLEK----CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHK  114 (303)
T ss_dssp             --CEEEEECCC--------------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTT
T ss_pred             CCcEEEEEEEEhhh----cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccc
Confidence            47889999986532    223456688999999999999999999999999999999999999999999864        


Q ss_pred             -cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc-------ccccCCCCCCccC
Q 041080           73 -YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN-------DLKSCKGTPFWMA  144 (247)
Q Consensus        73 -~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~-------~~~~~~~~~~~~a  144 (247)
                       ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......       ......+++.|+|
T Consensus       115 ~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~a  194 (303)
T 2vwi_A          115 SGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA  194 (303)
T ss_dssp             TCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCC
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccC
Confidence             23899999999999999999999999999999999999999999999999987544322       1223458899999


Q ss_pred             CcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC---------CCCCcCCHHHHHHHHHHhc
Q 041080          145 PEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP---------SVPSSLSRDARDFILKCLQ  215 (247)
Q Consensus       145 PE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~  215 (247)
                      ||.+.+.. .++.++|+||||+++++|++|..||.................+         .....+++++.+++.+||+
T Consensus       195 PE~~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  273 (303)
T 2vwi_A          195 PEVMEQVR-GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQ  273 (303)
T ss_dssp             HHHHHHHH-CCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCC
T ss_pred             HHHhcccc-CCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHcc
Confidence            99986422 2688999999999999999999999887665555443332222         2235688999999999999


Q ss_pred             CCCCCCCChhhhhcCccCCCC
Q 041080          216 VNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       216 ~~p~~Rps~~~il~~p~~~~~  236 (247)
                      .+|.+|||++++++||||+..
T Consensus       274 ~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          274 KDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             SSGGGSCCHHHHHTSTTC---
T ss_pred             CChhhCcCHHHHhhChhhhcC
Confidence            999999999999999999874


No 126
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=2.9e-45  Score=298.76  Aligned_cols=229  Identities=26%  Similarity=0.409  Sum_probs=180.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC------cEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN------RLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++....   ......+.+.+|+.+++.++||||+++++++...+      ..++||||+++ +|.+.+. ..
T Consensus        49 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~  123 (371)
T 2xrw_A           49 LERNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ-ME  123 (371)
T ss_dssp             TTEEEEEEEEECTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHH-SC
T ss_pred             CCceEEEEEecccc---CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHh-hc
Confidence            47889999997543   23455677889999999999999999999987654      78999999986 7888775 46


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      +++..+..++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+....... .....+++.|+|||.+.+.. 
T Consensus       124 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-  202 (371)
T 2xrw_A          124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-  202 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCC-
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCC-
Confidence            8999999999999999999999999999999999999999999999999987654332 33456899999999996644 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCC---------------------CCC-------------
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELP---------------------SVP-------------  199 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~~-------------  199 (247)
                       ++.++||||||+++|+|++|..||...+.......+......                     ...             
T Consensus       203 -~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (371)
T 2xrw_A          203 -YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLF  281 (371)
T ss_dssp             -CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGS
T ss_pred             -CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccC
Confidence             789999999999999999999999887766555444322110                     000             


Q ss_pred             -------CcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          200 -------SSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       200 -------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                             ...+.+++++|.+||..||.+|||++++++||||+..
T Consensus       282 ~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          282 PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             cccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence                   0125689999999999999999999999999999864


No 127
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=5.9e-45  Score=291.94  Aligned_cols=222  Identities=23%  Similarity=0.420  Sum_probs=192.7

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      +..||||++...    ......+.+.+|+.++++++||||+++++++.+++..++||||+++++|.++++..  .+++..
T Consensus        77 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  152 (325)
T 3kul_A           77 DVPVAIKALKAG----YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ  152 (325)
T ss_dssp             CEEEEEEEECTT----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHH
T ss_pred             CceEEEEecCCC----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHH
Confidence            345999999643    23455677899999999999999999999999999999999999999999999654  599999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+..  
T Consensus       153 ~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--  230 (325)
T 3kul_A          153 LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT--  230 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCE--
T ss_pred             HHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCC--
Confidence            99999999999999999999999999999999999999999999987554332     12223466799999996554  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++||||||+++|++++ |..||...........+........+..+++.+.+++.+||..+|.+|||++++++
T Consensus       231 ~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            7889999999999999998 99999998888888888777777778899999999999999999999999999986


No 128
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=1.4e-44  Score=286.03  Aligned_cols=231  Identities=25%  Similarity=0.437  Sum_probs=191.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||+|++....  .......+.+.+|+.++++++||||+++++++..++..++||||+++++|.++++.. .+++..
T Consensus        35 ~~~~vaiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~  112 (294)
T 4eqm_A           35 LNIKVAIKAIFIPP--REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDT  112 (294)
T ss_dssp             TCSEEEEEEEECCS--SCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHH
T ss_pred             CCCeEEEEEeccCc--cccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHH
Confidence            47899999997643  234566778999999999999999999999999999999999999999999999765 489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......   .....|++.|+|||.+.+..  ++
T Consensus       113 ~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~  190 (294)
T 4eqm_A          113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA--TD  190 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCC--CC
T ss_pred             HHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCC--CC
Confidence            99999999999999999999999999999999999999999999987554332   22345899999999997654  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC----CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS----VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      .++|+||||+++|+|++|..||.................+.    .+..+|+.+.+++.+||+.+|.+||+..+.+.++|
T Consensus       191 ~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             chHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence            89999999999999999999998877666655544443332    34678999999999999999999997666666665


Q ss_pred             CCC
Q 041080          233 VKR  235 (247)
Q Consensus       233 ~~~  235 (247)
                      .+-
T Consensus       271 ~~~  273 (294)
T 4eqm_A          271 SSV  273 (294)
T ss_dssp             HTS
T ss_pred             HHH
Confidence            543


No 129
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.7e-45  Score=298.46  Aligned_cols=226  Identities=26%  Similarity=0.410  Sum_probs=195.8

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--------   73 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------   73 (247)
                      |+.||||++...    ........+.+|+.++++++||||+++++++...+..++||||+++++|.+++...        
T Consensus       101 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~  176 (367)
T 3l9p_A          101 PLQVAVKTLPEV----CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS  176 (367)
T ss_dssp             CEEEEEEECCSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCC
T ss_pred             ceeEEEEecccc----cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccc
Confidence            568999998642    23445567889999999999999999999999999999999999999999999764        


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC---CeEEcccccccccCcc----ccccCCCCCCccCCc
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG---SVKLADFGLAKATTMN----DLKSCKGTPFWMAPE  146 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~---~~~l~df~~~~~~~~~----~~~~~~~~~~~~aPE  146 (247)
                      .+++..++.++.|++.||.|||++||+|+||||+||+++.++   .++|+|||.+......    ......+++.|+|||
T Consensus       177 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE  256 (367)
T 3l9p_A          177 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE  256 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH
Confidence            388999999999999999999999999999999999999555   4999999998643221    222344678899999


Q ss_pred             ccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChh
Q 041080          147 VVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVT  225 (247)
Q Consensus       147 ~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (247)
                      .+.+..  ++.++||||||+++|+|++ |..||...........+........+..+++.+.+++.+||+.+|.+|||++
T Consensus       257 ~~~~~~--~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~  334 (367)
T 3l9p_A          257 AFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA  334 (367)
T ss_dssp             HHHHCC--CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HhcCCC--CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHH
Confidence            986554  7999999999999999998 9999999888888888887777777888999999999999999999999999


Q ss_pred             hhhcCccC
Q 041080          226 ELMEHPFV  233 (247)
Q Consensus       226 ~il~~p~~  233 (247)
                      +++++.++
T Consensus       335 eil~~l~~  342 (367)
T 3l9p_A          335 IILERIEY  342 (367)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998754


No 130
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=6.4e-45  Score=284.38  Aligned_cols=222  Identities=22%  Similarity=0.414  Sum_probs=194.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC--CCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH--LSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~   78 (247)
                      +++.||+|++.....      ..+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++....  +++.
T Consensus        33 ~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  106 (269)
T 4hcu_A           33 NKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE  106 (269)
T ss_dssp             TTEEEEEEEECTTSB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHH
T ss_pred             CCCeEEEEEeccccc------CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHH
Confidence            467899999975432      12468899999999999999999999999999999999999999999997643  8999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......   .....++..|+|||.+.+..  +
T Consensus       107 ~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  184 (269)
T 4hcu_A          107 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--Y  184 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCC--C
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCC--C
Confidence            999999999999999999999999999999999999999999999987554332   22333566799999996554  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      +.++|+||+|++++++++ |..||...........+........+...++++.+++.+||+.+|.+|||+++++++
T Consensus       185 ~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          185 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            899999999999999999 999999988888888887776777788899999999999999999999999999875


No 131
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=296.58  Aligned_cols=222  Identities=27%  Similarity=0.495  Sum_probs=196.0

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC-------
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH-------   74 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------   74 (247)
                      ..||||++...    ......+.+.+|+.+++++ +||||+++++++.+.+..++||||+++++|.+++....       
T Consensus       102 ~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~  177 (382)
T 3tt0_A          102 TKVAVKMLKSD----ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS  177 (382)
T ss_dssp             EEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSC
T ss_pred             eEEEEEeeccc----cCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccc
Confidence            57999998643    3445567889999999999 89999999999999999999999999999999998753       


Q ss_pred             ----------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCC
Q 041080           75 ----------LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTP  140 (247)
Q Consensus        75 ----------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~  140 (247)
                                +++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......    .....++.
T Consensus       178 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~  257 (382)
T 3tt0_A          178 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV  257 (382)
T ss_dssp             CCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGG
T ss_pred             cccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCc
Confidence                      8999999999999999999999999999999999999999999999999987554332    22334567


Q ss_pred             CccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCC
Q 041080          141 FWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPN  219 (247)
Q Consensus       141 ~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  219 (247)
                      .|+|||.+.+..  ++.++||||||+++++|++ |..||...........+........+..+++++.+++.+||+.+|.
T Consensus       258 ~y~aPE~~~~~~--~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~  335 (382)
T 3tt0_A          258 KWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPS  335 (382)
T ss_dssp             GGSCHHHHHSCC--CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGG
T ss_pred             ceeCHHHhcCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChh
Confidence            899999996544  7899999999999999999 9999998888888888877777777889999999999999999999


Q ss_pred             CCCChhhhhcC
Q 041080          220 DRPTVTELMEH  230 (247)
Q Consensus       220 ~Rps~~~il~~  230 (247)
                      +|||+++++++
T Consensus       336 ~Rps~~ell~~  346 (382)
T 3tt0_A          336 QRPTFKQLVED  346 (382)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999873


No 132
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=6.5e-45  Score=291.51  Aligned_cols=232  Identities=23%  Similarity=0.433  Sum_probs=182.9

Q ss_pred             eEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcE------EEEEeccccCcHHHHHHhc----
Q 041080            4 FFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRL------YIFLELVTKGSLANLYQKY----   73 (247)
Q Consensus         4 ~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e~~~~~~L~~~l~~~----   73 (247)
                      .||||++.....   .....+.+.+|+.++++++||||+++++++...+..      ++||||+.+++|.+++...    
T Consensus        53 ~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~  129 (323)
T 3qup_A           53 KVAVKMLKADII---ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE  129 (323)
T ss_dssp             EEEEEEC---------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC--
T ss_pred             eEEEEEeccccc---CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccc
Confidence            799999975432   234467789999999999999999999998877655      9999999999999988643    


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc----ccCCCCCCccCCc
Q 041080           74 ---HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL----KSCKGTPFWMAPE  146 (247)
Q Consensus        74 ---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~aPE  146 (247)
                         .+++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........    ....++..|+|||
T Consensus       130 ~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE  209 (323)
T 3qup_A          130 NPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE  209 (323)
T ss_dssp             -CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHH
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCch
Confidence               489999999999999999999999999999999999999999999999999865443321    1233566899999


Q ss_pred             ccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCC--
Q 041080          147 VVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPT--  223 (247)
Q Consensus       147 ~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps--  223 (247)
                      .+.+..  ++.++||||||+++|+|++ |..||...........+........+..+++++.+++.+||..+|.+|||  
T Consensus       210 ~~~~~~--~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  287 (323)
T 3qup_A          210 SLADNL--YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFT  287 (323)
T ss_dssp             HHHHCC--CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHH
T ss_pred             hhcCCC--CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHH
Confidence            986654  7899999999999999999 99999998888888887777777778889999999999999999999999  


Q ss_pred             -----hhhhhcCccCCCCCCCC
Q 041080          224 -----VTELMEHPFVKRPLQTP  240 (247)
Q Consensus       224 -----~~~il~~p~~~~~~~~~  240 (247)
                           ++++++|||+....+.|
T Consensus       288 ~l~~~l~~~l~~~~~~~~~~~p  309 (323)
T 3qup_A          288 CLRMELENILGHLSVLSTSQDP  309 (323)
T ss_dssp             HHHHHHHHHHHC----------
T ss_pred             HHHHHHHHHHHHhhhcCCCCCC
Confidence                 88888999998865554


No 133
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=7.8e-45  Score=296.26  Aligned_cols=229  Identities=28%  Similarity=0.454  Sum_probs=186.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcE------EEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRL------YIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++....   ......+.+.+|+.+++.++||||+++++++...+..      ++||||+.+ +|.+.+.. .
T Consensus        66 ~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~  140 (371)
T 4exu_A           66 SGEKVAIKKLSRPF---QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGM-E  140 (371)
T ss_dssp             TTEEEEEEEECSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHHHTTS-C
T ss_pred             CCCEEEEEEecccc---cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEccccc-cHHHHhhc-C
Confidence            47899999997543   3345567888999999999999999999999877654      999999985 88887743 5


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+...... .....+++.|+|||.+.+.. .
T Consensus       141 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~t~~y~aPE~~~~~~-~  218 (371)
T 4exu_A          141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-MTGYVVTRWYRAPEVILSWM-H  218 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---------CTTCCCTTSCHHHHSCCS-C
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC-cCCcccCccccCHHHhcCCC-C
Confidence            999999999999999999999999999999999999999999999999998754432 34456899999999986532 3


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC---------------------------C---CCCCCCcCCH
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG---------------------------E---LPSVPSSLSR  204 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~---------------------------~---~~~~~~~~~~  204 (247)
                      ++.++|+||||+++++|++|..||...+..+....+...                           .   .......+++
T Consensus       219 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (371)
T 4exu_A          219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP  298 (371)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCH
T ss_pred             CCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccCh
Confidence            789999999999999999999999887655554433210                           0   0011245789


Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ++.++|.+||+.||.+|||++++++||||+..
T Consensus       299 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          299 QAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            99999999999999999999999999999864


No 134
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.2e-44  Score=296.44  Aligned_cols=224  Identities=26%  Similarity=0.448  Sum_probs=183.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec------------------------------
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD------------------------------   50 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------------------------------   50 (247)
                      +|+.||||++......         ..+|+.+++.++||||+++++++..                              
T Consensus        31 ~~~~vAiK~~~~~~~~---------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (383)
T 3eb0_A           31 SGKRFALKKVLQDPRY---------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHK  101 (383)
T ss_dssp             TCCEEEEEEEECCTTS---------CCHHHHHHTTCCCTTBCCEEEEEEEC-----------------------------
T ss_pred             CCCEEEEEEEecCcch---------HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccc
Confidence            5889999999754321         1279999999999999999998843                              


Q ss_pred             --------CCcEEEEEeccccCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc-CCCC
Q 041080           51 --------ENRLYIFLELVTKGSLANLYQK-----YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVD-ASGS  116 (247)
Q Consensus        51 --------~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~-~~~~  116 (247)
                              ....++||||+++ +|.+.+..     ..+++..++.++.|++.||.|||+.|++|+||||+||+++ .++.
T Consensus       102 ~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~  180 (383)
T 3eb0_A          102 SVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT  180 (383)
T ss_dssp             --------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTE
T ss_pred             cccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCc
Confidence                    3458999999986 88777653     3599999999999999999999999999999999999997 6889


Q ss_pred             eEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC--
Q 041080          117 VKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG--  193 (247)
Q Consensus       117 ~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~--  193 (247)
                      ++|+|||.+...... ......++..|+|||.+.+.. .++.++||||+|+++|+|++|..||......+....+...  
T Consensus       181 ~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g  259 (383)
T 3eb0_A          181 LKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGAT-EYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMG  259 (383)
T ss_dssp             EEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCS-SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred             EEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCC-CCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence            999999998754333 334556899999999986533 2789999999999999999999999887766655443210  


Q ss_pred             -----------------CCC---------CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          194 -----------------ELP---------SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       194 -----------------~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                                       ..+         .++...++++.++|.+||..+|.+|||+.|+++||||+.
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          260 TPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             CCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             CCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                             001         134568899999999999999999999999999999975


No 135
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=7.8e-45  Score=291.35  Aligned_cols=230  Identities=33%  Similarity=0.646  Sum_probs=188.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeec------CCcEEEEEeccccCcHHHHHHh-
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKD------ENRLYIFLELVTKGSLANLYQK-   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~-   72 (247)
                      +|+.||||++.....      ..+.+.+|+.+++++ +||||+++++++..      .+..++||||+++++|.+++.. 
T Consensus        48 ~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           48 TGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             TCCEEEEEEEECCSS------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHS
T ss_pred             CCCeEEEEEEecCcc------cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhc
Confidence            478999999975432      234678999999999 79999999999876      5688999999999999999976 


Q ss_pred             --cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--ccccCCCCCCccCCccc
Q 041080           73 --YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--DLKSCKGTPFWMAPEVV  148 (247)
Q Consensus        73 --~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~aPE~~  148 (247)
                        ..+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+......  ......++..|+|||.+
T Consensus       122 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~  201 (326)
T 2x7f_A          122 KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI  201 (326)
T ss_dssp             GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhh
Confidence              35999999999999999999999999999999999999999999999999998654332  22344588999999998


Q ss_pred             ccC---CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC-CCCcCCHHHHHHHHHHhcCCCCCCCCh
Q 041080          149 NSK---NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS-VPSSLSRDARDFILKCLQVNPNDRPTV  224 (247)
Q Consensus       149 ~~~---~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (247)
                      ...   ...++.++|+||||+++|+|++|..||...........+.....+. .+..+++.++++|.+||..+|.+|||+
T Consensus       202 ~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  281 (326)
T 2x7f_A          202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPAT  281 (326)
T ss_dssp             C--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             ccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCH
Confidence            532   2347889999999999999999999998877666655554443333 356789999999999999999999999


Q ss_pred             hhhhcCccCCCC
Q 041080          225 TELMEHPFVKRP  236 (247)
Q Consensus       225 ~~il~~p~~~~~  236 (247)
                      +++++||||+..
T Consensus       282 ~~ll~hp~~~~~  293 (326)
T 2x7f_A          282 EQLMKHPFIRDQ  293 (326)
T ss_dssp             HHHHTSHHHHCC
T ss_pred             HHHhhChHHhhC
Confidence            999999999864


No 136
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.8e-44  Score=292.18  Aligned_cols=231  Identities=29%  Similarity=0.512  Sum_probs=188.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC-----CcEEEEEeccccCcHHHHHHhcCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE-----NRLYIFLELVTKGSLANLYQKYHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~   75 (247)
                      +|+.||||++...    ........+.+|+.++++++||||+++++++...     ...++||||+.+ +|.+++....+
T Consensus        35 ~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~  109 (353)
T 2b9h_A           35 TGEIVAIKKIEPF----DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQML  109 (353)
T ss_dssp             TTEEEEEEEECCC----SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHHHHHCCC
T ss_pred             CCcEEEEEeeccc----ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccCc-cHHHHHhhcCC
Confidence            4789999999642    2344566788999999999999999999987653     688999999975 99999998889


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc------------cccCCCCCCcc
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND------------LKSCKGTPFWM  143 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------------~~~~~~~~~~~  143 (247)
                      ++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......            .....|++.|+
T Consensus       110 ~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  189 (353)
T 2b9h_A          110 SDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR  189 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhcccccccc
Confidence            999999999999999999999999999999999999999999999999986543221            12345788999


Q ss_pred             CCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc--C---------------------CCC----
Q 041080          144 APEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK--G---------------------ELP----  196 (247)
Q Consensus       144 aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~--~---------------------~~~----  196 (247)
                      |||.+.+.. .++.++|+||||+++++|++|..||...+.......+..  +                     ..+    
T Consensus       190 aPE~~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (353)
T 2b9h_A          190 APEVMLTSA-KYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPA  268 (353)
T ss_dssp             CHHHHHSCC-CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCC
T ss_pred             CCeeeccCC-CccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCC
Confidence            999875422 378999999999999999999999987765444332211  0                     000    


Q ss_pred             ----CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          197 ----SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       197 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                          .....+++++.+++.+||..||.+|||++++++||||+...
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          269 APLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             CCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             cchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence                11246889999999999999999999999999999998753


No 137
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=6.9e-45  Score=284.41  Aligned_cols=226  Identities=27%  Similarity=0.508  Sum_probs=181.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQVS   81 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   81 (247)
                      |+.||||++..... .......+.+.+|+.+++.++||||+++++++..++..++||||+++++|.++++...+++..++
T Consensus        30 ~~~vavK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  108 (271)
T 3dtc_A           30 GDEVAVKAARHDPD-EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILV  108 (271)
T ss_dssp             TEEEEEEEC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSSCCCHHHHH
T ss_pred             CCeEEEEEEecCCc-ccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcCCCCHHHHH
Confidence            67899999876432 22234456788999999999999999999999999999999999999999999988889999999


Q ss_pred             HHHHHHHHHHHHhhhCC---eeecCCCCCcEEEcC--------CCCeEEcccccccccCccccccCCCCCCccCCccccc
Q 041080           82 SYTRQILNGLVYLHERN---VVHRDIKCANILVDA--------SGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNS  150 (247)
Q Consensus        82 ~~~~~l~~~l~~lh~~~---i~h~dl~~~ni~~~~--------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~  150 (247)
                      .++.|++.||.+||++|   ++|+||||+||+++.        ++.++|+|||.+............+++.|+|||.+.+
T Consensus       109 ~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~  188 (271)
T 3dtc_A          109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRA  188 (271)
T ss_dssp             HHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCccceeCHHHhcc
Confidence            99999999999999999   899999999999986        6789999999997666555556678999999999865


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC-CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          151 KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE-LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       151 ~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ..  ++.++|+||||++++++++|..||................ ....+..+++.+.+++.+||+.+|.+|||++++++
T Consensus       189 ~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  266 (271)
T 3dtc_A          189 SM--FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILD  266 (271)
T ss_dssp             CC--CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            54  7899999999999999999999998877766665554433 34566789999999999999999999999999986


Q ss_pred             C
Q 041080          230 H  230 (247)
Q Consensus       230 ~  230 (247)
                      +
T Consensus       267 ~  267 (271)
T 3dtc_A          267 Q  267 (271)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 138
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.2e-44  Score=282.62  Aligned_cols=221  Identities=24%  Similarity=0.440  Sum_probs=193.3

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      +..||+|++.....      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++...  .+++..
T Consensus        32 ~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  105 (268)
T 3sxs_A           32 QYDVAVKMIKEGSM------SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ  105 (268)
T ss_dssp             TEEEEEEEECBTTB------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHH
T ss_pred             ceeEEEEEeccCCC------cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHH
Confidence            56799999975432      2345889999999999999999999999999999999999999999998764  499999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccc---cCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLK---SCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.........   ...++..|+|||.+.+..  ++
T Consensus       106 ~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  183 (268)
T 3sxs_A          106 LLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK--YS  183 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSE--EE
T ss_pred             HHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccC--Cc
Confidence            9999999999999999999999999999999999999999999998755443322   233456799999986554  78


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          157 LTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      .++|+||+|++++++++ |..||...........+........+...++.+.+++.+||+.+|.+|||+.+++++
T Consensus       184 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             TTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            89999999999999998 999999888888887777777767778889999999999999999999999999875


No 139
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=7.5e-45  Score=293.36  Aligned_cols=222  Identities=25%  Similarity=0.451  Sum_probs=194.6

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh---------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK---------   72 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------   72 (247)
                      |+.||||++...    ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++..         
T Consensus        77 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  152 (343)
T 1luf_A           77 FTMVAVKMLKEE----ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSL  152 (343)
T ss_dssp             EEEEEEEECCTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC------
T ss_pred             ceeEEEEEeccc----cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccc
Confidence            478999999643    2345567889999999999999999999999999999999999999999999976         


Q ss_pred             ----------------cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----
Q 041080           73 ----------------YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----  132 (247)
Q Consensus        73 ----------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----  132 (247)
                                      ..+++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......    
T Consensus       153 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~  232 (343)
T 1luf_A          153 SHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA  232 (343)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-
T ss_pred             ccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccc
Confidence                            458899999999999999999999999999999999999999999999999986443222    


Q ss_pred             cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHH
Q 041080          133 LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFIL  211 (247)
Q Consensus       133 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  211 (247)
                      .....++..|+|||.+.+..  ++.++|+||||+++|+|++ |..||...........+..+.....+..+++++.+++.
T Consensus       233 ~~~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  310 (343)
T 1luf_A          233 DGNDAIPIRWMPPESIFYNR--YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMR  310 (343)
T ss_dssp             ---CCBCGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCcccceecChhhhccCC--cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHH
Confidence            22344677899999986554  7899999999999999998 99999988888888877777777788899999999999


Q ss_pred             HHhcCCCCCCCChhhhhc
Q 041080          212 KCLQVNPNDRPTVTELME  229 (247)
Q Consensus       212 ~~l~~~p~~Rps~~~il~  229 (247)
                      +||+.+|.+|||++++++
T Consensus       311 ~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          311 LCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcccCcccCCCHHHHHH
Confidence            999999999999999986


No 140
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=8.3e-45  Score=289.65  Aligned_cols=223  Identities=25%  Similarity=0.446  Sum_probs=194.6

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC-------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH-------   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------   74 (247)
                      |+.||||++...    ......+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++....       
T Consensus        53 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  128 (314)
T 2ivs_A           53 YTTVAVKMLKEN----ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL  128 (314)
T ss_dssp             EEEEEEEECCTT----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC
T ss_pred             cceEEEEeccCC----CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcc
Confidence            478999998643    235556788999999999999999999999999999999999999999999997632       


Q ss_pred             ------------------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----
Q 041080           75 ------------------LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----  132 (247)
Q Consensus        75 ------------------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----  132 (247)
                                        +++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......    
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~  208 (314)
T 2ivs_A          129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK  208 (314)
T ss_dssp             ----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEEC
T ss_pred             cccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccccccccee
Confidence                              7899999999999999999999999999999999999999999999999986543322    


Q ss_pred             cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHH
Q 041080          133 LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFIL  211 (247)
Q Consensus       133 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  211 (247)
                      .....++..|+|||.+.+..  ++.++|+||||+++|+|++ |..||...........+........+..+++++.+++.
T Consensus       209 ~~~~~~~~~y~aPE~~~~~~--~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  286 (314)
T 2ivs_A          209 RSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLML  286 (314)
T ss_dssp             SSCCCSCGGGCCHHHHHHCE--ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             ccCCCCcccccChhhhcCCC--cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHH
Confidence            22333567799999986544  7899999999999999999 99999988887777777777777778899999999999


Q ss_pred             HHhcCCCCCCCChhhhhcC
Q 041080          212 KCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       212 ~~l~~~p~~Rps~~~il~~  230 (247)
                      +||..+|.+|||+++++++
T Consensus       287 ~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          287 QCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCChhhCcCHHHHHHH
Confidence            9999999999999999864


No 141
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.5e-45  Score=293.76  Aligned_cols=231  Identities=25%  Similarity=0.392  Sum_probs=189.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC----cEEEEEeccccCcHHHHHHhc-CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN----RLYIFLELVTKGSLANLYQKY-HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~-~~   75 (247)
                      +|+.||||++.....  ........+.+|+.++++++||||+++++++....    ..++||||+++++|.++++.. .+
T Consensus        36 ~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~  113 (311)
T 3ork_A           36 DHRDVAVKVLRADLA--RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM  113 (311)
T ss_dssp             TTEEEEEEEECTTTT--TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSC
T ss_pred             CCceEEEEEeCcccc--CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCC
Confidence            478999999976432  34455678899999999999999999999887654    349999999999999999764 59


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCccccc
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNS  150 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~  150 (247)
                      ++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.......     .....|++.|+|||.+.+
T Consensus       114 ~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  193 (311)
T 3ork_A          114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG  193 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcC
Confidence            999999999999999999999999999999999999999999999999986543321     223458999999999966


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC---CCCcCCHHHHHHHHHHhcCCCCCCCChhhh
Q 041080          151 KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS---VPSSLSRDARDFILKCLQVNPNDRPTVTEL  227 (247)
Q Consensus       151 ~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  227 (247)
                      ..  ++.++||||||+++|+|++|..||...................   ....+++++.+++.+||+.||.+||++.++
T Consensus       194 ~~--~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~  271 (311)
T 3ork_A          194 DS--VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE  271 (311)
T ss_dssp             CC--CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred             CC--CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHH
Confidence            54  7899999999999999999999998877766655544433221   134689999999999999999999999999


Q ss_pred             hcCccCCC
Q 041080          228 MEHPFVKR  235 (247)
Q Consensus       228 l~~p~~~~  235 (247)
                      +.|+|++.
T Consensus       272 l~~~l~~~  279 (311)
T 3ork_A          272 MRADLVRV  279 (311)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999975


No 142
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=8.5e-45  Score=290.75  Aligned_cols=234  Identities=30%  Similarity=0.480  Sum_probs=184.3

Q ss_pred             CCceEEEEEEeecCCC---ccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCC
Q 041080            1 DGFFFAVKEVSLQDQG---AQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~   76 (247)
                      +|+.||||++......   .........+.+|+.++++++||||+++++++..++ .++||||+++++|.+++... .++
T Consensus        34 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~  112 (322)
T 2ycf_A           34 TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLK  112 (322)
T ss_dssp             TTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCC
T ss_pred             CCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCC
Confidence            4789999999764321   112233445889999999999999999999987665 89999999999999988654 599


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC---eEEcccccccccCccc-cccCCCCCCccCCccccc-C
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS---VKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNS-K  151 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~---~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~-~  151 (247)
                      +..++.++.|++.||.+||++|++|+||||+||+++.++.   ++|+|||.+....... .....+++.|+|||.+.+ .
T Consensus       113 ~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  192 (322)
T 2ycf_A          113 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG  192 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCC
Confidence            9999999999999999999999999999999999987664   9999999987654332 223448899999999742 2


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh-HHHHHhhcCCCCC---CCCcCCHHHHHHHHHHhcCCCCCCCChhhh
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV-QALFRIGKGELPS---VPSSLSRDARDFILKCLQVNPNDRPTVTEL  227 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~i  227 (247)
                      ...++.++|+||||+++|+|++|..||...... .....+..+....   ....+++.+.+++.+||..||.+|||++++
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~  272 (322)
T 2ycf_A          193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA  272 (322)
T ss_dssp             TTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHH
Confidence            334788999999999999999999999765433 2223333333222   225689999999999999999999999999


Q ss_pred             hcCccCCC
Q 041080          228 MEHPFVKR  235 (247)
Q Consensus       228 l~~p~~~~  235 (247)
                      ++||||+.
T Consensus       273 l~h~~~~~  280 (322)
T 2ycf_A          273 LRHPWLQD  280 (322)
T ss_dssp             HTSGGGCC
T ss_pred             hhCcCcCC
Confidence            99999985


No 143
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=1.3e-45  Score=300.97  Aligned_cols=232  Identities=13%  Similarity=0.118  Sum_probs=171.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc--CCCceeeec-------eeeecC-----------------CcE
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF--EQDNIVQYL-------GTDKDE-----------------NRL   54 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~~i~~~~-------~~~~~~-----------------~~~   54 (247)
                      +|+.||||++.....  ......+.+.+|+.+++.+  +||||++++       +++...                 ...
T Consensus        86 ~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~  163 (371)
T 3q60_A           86 RLEDFALKVFTMGAE--NSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANY  163 (371)
T ss_dssp             TTEEEEEEEEECCST--THHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEE
T ss_pred             CCceeEEEEEEeccc--ccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeE
Confidence            478999999987542  2345566778885555554  699988755       344332                 338


Q ss_pred             EEEEeccccCcHHHHHHhc--CCCHHHH------HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           55 YIFLELVTKGSLANLYQKY--HLSDSQV------SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        55 ~lv~e~~~~~~L~~~l~~~--~~~~~~~------~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      ++||||++ ++|.++++..  .++...+      ..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++.
T Consensus       164 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~  242 (371)
T 3q60_A          164 LLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALW  242 (371)
T ss_dssp             EEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEE
T ss_pred             EEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceee
Confidence            99999998 6999999764  3555555      6778999999999999999999999999999999999999999997


Q ss_pred             ccCccccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHH-----hh--c-CCCCCC
Q 041080          127 ATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFR-----IG--K-GELPSV  198 (247)
Q Consensus       127 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~-----~~--~-~~~~~~  198 (247)
                      ....... ...+++.|+|||.+.+....++.++||||||+++|+|++|..||...........     ..  . ......
T Consensus       243 ~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  321 (371)
T 3q60_A          243 KVGTRGP-ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGS  321 (371)
T ss_dssp             ETTCEEE-GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTT
T ss_pred             ecCCCcc-CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhh
Confidence            6654332 3345699999999966334489999999999999999999999976533211100     00  0 111122


Q ss_pred             CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          199 PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       199 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ...+++.+.++|.+||..||.+|||++++++||||+..
T Consensus       322 ~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          322 CTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            24789999999999999999999999999999999853


No 144
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.8e-44  Score=299.08  Aligned_cols=230  Identities=28%  Similarity=0.437  Sum_probs=185.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc------CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF------EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++...      ......+.+|+.+++.+      .|+||+++++++...+..++||||+.+ +|.+++....
T Consensus       121 ~~~~vAvK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~  193 (429)
T 3kvw_A          121 VHQHVALKMVRNE------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNK  193 (429)
T ss_dssp             TTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTT
T ss_pred             CCcEEEEEEECCc------cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhcc
Confidence            4789999999642      33455677888888877      567999999999999999999999965 8988887653


Q ss_pred             ---CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC--eEEcccccccccCccccccCCCCCCccCCcccc
Q 041080           75 ---LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS--VKLADFGLAKATTMNDLKSCKGTPFWMAPEVVN  149 (247)
Q Consensus        75 ---~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~--~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~  149 (247)
                         +++..++.++.|++.||.|||+.||+|+||||+||+++.++.  ++|+|||++..... ......+++.|+|||.+.
T Consensus       194 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~-~~~~~~gt~~y~aPE~~~  272 (429)
T 3kvw_A          194 FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-RVYTYIQSRFYRAPEVIL  272 (429)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC-CCCSSCSCGGGCCHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC-cccccCCCCCccChHHHh
Confidence               899999999999999999999999999999999999999887  99999999865443 233456899999999997


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC----------------------CCC-----------
Q 041080          150 SKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG----------------------ELP-----------  196 (247)
Q Consensus       150 ~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~----------------------~~~-----------  196 (247)
                      +..  ++.++||||||+++|+|++|..||...+..+....+...                      ..+           
T Consensus       273 ~~~--~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  350 (429)
T 3kvw_A          273 GAR--YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDG  350 (429)
T ss_dssp             TBC--CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC-
T ss_pred             CCC--CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccc
Confidence            655  799999999999999999999999887665554332210                      000           


Q ss_pred             -------------------------CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCCCC
Q 041080          197 -------------------------SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQTP  240 (247)
Q Consensus       197 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~~~  240 (247)
                                               .++...++++.+||.+||+.||.+|||++|+|+||||+.....+
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~  419 (429)
T 3kvw_A          351 SVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKP  419 (429)
T ss_dssp             -CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC------
T ss_pred             cccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCC
Confidence                                     01123478899999999999999999999999999999876544


No 145
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.4e-44  Score=285.04  Aligned_cols=230  Identities=30%  Similarity=0.531  Sum_probs=194.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-cCCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-YHLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~   79 (247)
                      +|+.||||++......   ....+.+.+|+.++++++||||+++++++...+..++||||+++++|.+.+.. ..+++..
T Consensus        46 ~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  122 (287)
T 2wei_A           46 TQQEYAVKVINKASAK---NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD  122 (287)
T ss_dssp             TCCEEEEEEEEGGGBS---SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHH
T ss_pred             CCcEEEEEEecccccc---hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHH
Confidence            4789999999765432   22356788999999999999999999999999999999999999999887754 4699999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC---CCeEEcccccccccCccc-cccCCCCCCccCCcccccCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS---GSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~---~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||+++.+   +.++|+|||.+....... .....+++.|+|||.+.+.   +
T Consensus       123 ~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~  199 (287)
T 2wei_A          123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT---Y  199 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC---C
T ss_pred             HHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcCC---C
Confidence            99999999999999999999999999999999764   469999999986544332 2223367889999998643   7


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCC---CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSV---PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +.++|+||||+++++|++|..||...........+..+.....   ...+++++.+++.+||..+|.+|||++++++|||
T Consensus       200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~  279 (287)
T 2wei_A          200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW  279 (287)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred             CCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHH
Confidence            8899999999999999999999998887777666655543221   2468999999999999999999999999999999


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      |++.
T Consensus       280 ~~~~  283 (287)
T 2wei_A          280 IQKY  283 (287)
T ss_dssp             HHHH
T ss_pred             Hhcc
Confidence            9864


No 146
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=298.50  Aligned_cols=227  Identities=28%  Similarity=0.436  Sum_probs=174.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeee--cCCcEEEEEeccccCcHHHHHHhc-----
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDK--DENRLYIFLELVTKGSLANLYQKY-----   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~-----   73 (247)
                      +|+.||||++.....       ...+.+|+.++++++||||+++++++.  .....++||||+.+ +|.+++...     
T Consensus        47 ~~~~vaiK~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~  118 (405)
T 3rgf_A           47 DDKDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKA  118 (405)
T ss_dssp             CCCCEEEEECSSSSC-------CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-
T ss_pred             CCeEEEEEEECCCCC-------CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccc
Confidence            367899999964322       124679999999999999999999984  46789999999976 787776532     


Q ss_pred             -----CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE----cCCCCeEEcccccccccCcc-----ccccCCCC
Q 041080           74 -----HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILV----DASGSVKLADFGLAKATTMN-----DLKSCKGT  139 (247)
Q Consensus        74 -----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~----~~~~~~~l~df~~~~~~~~~-----~~~~~~~~  139 (247)
                           .+++..++.++.|++.||.|||+.||+|+||||+||++    +.++.++|+|||++......     ......|+
T Consensus       119 ~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt  198 (405)
T 3rgf_A          119 NKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT  198 (405)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CC
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceec
Confidence                 38999999999999999999999999999999999999    67789999999999754432     23345689


Q ss_pred             CCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh---------HHHHHhhc--C-CCC-----------
Q 041080          140 PFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV---------QALFRIGK--G-ELP-----------  196 (247)
Q Consensus       140 ~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~---------~~~~~~~~--~-~~~-----------  196 (247)
                      +.|+|||.+.+.. .++.++||||||+++|+|++|..||......         +....+..  + ...           
T Consensus       199 ~~y~aPE~~~~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~  277 (405)
T 3rgf_A          199 FWYRAPELLLGAR-HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPE  277 (405)
T ss_dssp             CTTCCHHHHTTCC-SCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTT
T ss_pred             CcccCchhhcCCC-cccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcc
Confidence            9999999986533 2789999999999999999999999654331         11111110  0 000           


Q ss_pred             -----------------------CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          197 -----------------------SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       197 -----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                                             ......++.+.+||.+||..||.+|||++|+|+||||+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          278 HSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             HHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             hhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence                                   0011226788999999999999999999999999999874


No 147
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=7.9e-44  Score=285.45  Aligned_cols=230  Identities=32%  Similarity=0.548  Sum_probs=186.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc---CCCceeeeceeee-----cCCcEEEEEeccccCcHHHHHHh
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF---EQDNIVQYLGTDK-----DENRLYIFLELVTKGSLANLYQK   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~   72 (247)
                      +|+.||||++..........   ..+.+|+.+++.+   +||||+++++++.     .....++||||+.+ +|.+++..
T Consensus        36 ~~~~vavK~~~~~~~~~~~~---~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~  111 (326)
T 1blx_A           36 GGRFVALKRVRVQTGEEGMP---LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDK  111 (326)
T ss_dssp             TTEEEEEEEEEEEBCTTSCB---CTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHH
T ss_pred             CCEEEEEEEeccCcccccCC---chhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHh
Confidence            47889999997654322111   2344666666655   8999999999986     55688999999985 99999876


Q ss_pred             cC---CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc-ccccCCCCCCccCCccc
Q 041080           73 YH---LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVV  148 (247)
Q Consensus        73 ~~---~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~  148 (247)
                      ..   +++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+...... ......++..|+|||.+
T Consensus       112 ~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~  191 (326)
T 1blx_A          112 VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL  191 (326)
T ss_dssp             SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHH
Confidence            43   899999999999999999999999999999999999999999999999998765433 23445689999999999


Q ss_pred             ccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC--------------------------CCCCCCCcC
Q 041080          149 NSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG--------------------------ELPSVPSSL  202 (247)
Q Consensus       149 ~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~  202 (247)
                      .+..  ++.++|+||||+++|+|++|..||...........+...                          ........+
T Consensus       192 ~~~~--~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (326)
T 1blx_A          192 LQSS--YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI  269 (326)
T ss_dssp             TTCC--CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSC
T ss_pred             hcCC--CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccC
Confidence            6544  789999999999999999999999887766554443210                          011233568


Q ss_pred             CHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          203 SRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       203 ~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ++.+++++.+||..+|.+|||++++++||||+..
T Consensus       270 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  303 (326)
T 1blx_A          270 DELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  303 (326)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence            9999999999999999999999999999999875


No 148
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=7e-45  Score=297.08  Aligned_cols=223  Identities=24%  Similarity=0.439  Sum_probs=192.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +|+.||||++...    ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++...  .+++.
T Consensus       138 ~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~  213 (377)
T 3cbl_A          138 DNTLVAVKSCRET----LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVK  213 (377)
T ss_dssp             TCCEEEEEECCTT----SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHH
T ss_pred             CCeEEEEEEcccc----CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHH
Confidence            4789999998643    23444567889999999999999999999999999999999999999999998764  48999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccC----CCCCCccCCcccccCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSC----KGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~----~~~~~~~aPE~~~~~~~~  154 (247)
                      .++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++...........    .++..|+|||.+.+..  
T Consensus       214 ~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  291 (377)
T 3cbl_A          214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR--  291 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCE--
T ss_pred             HHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCC--
Confidence            9999999999999999999999999999999999999999999999865433222111    1345699999986544  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++||||||+++|++++ |..||...........+..+.....+..+|+++.+++.+||+.+|.+|||++++++
T Consensus       292 ~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            7889999999999999998 99999988887777777777666778889999999999999999999999999975


No 149
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=2.7e-44  Score=291.28  Aligned_cols=229  Identities=28%  Similarity=0.458  Sum_probs=186.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCc------EEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENR------LYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++...+.      .++||||+.+ +|.+++.. .
T Consensus        48 ~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~  122 (353)
T 3coi_A           48 SGEKVAIKKLSRPF---QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGL-K  122 (353)
T ss_dssp             TTEEEEEEEESSTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTTTS-C
T ss_pred             CCCEEEEEEecccc---cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEeccccC-CHHHHhcC-C
Confidence            48899999997543   334556778899999999999999999999887654      4999999975 88887753 5


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+...... .....+++.|+|||.+.+.. .
T Consensus       123 ~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~t~~y~aPE~~~~~~-~  200 (353)
T 3coi_A          123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-MTGYVVTRWYRAPEVILSWM-H  200 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC---------CCSBCCSCHHHHSCCS-C
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC-ccccccCcCcCCHHHHhCcC-C
Confidence            999999999999999999999999999999999999999999999999998764432 33456889999999986522 3


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc------------------------------CCCCCCCCcCCH
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK------------------------------GELPSVPSSLSR  204 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~  204 (247)
                      ++.++|+||||+++++|++|..||...+..+....+..                              .........+++
T Consensus       201 ~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (353)
T 3coi_A          201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASP  280 (353)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCH
Confidence            78899999999999999999999987665444332211                              112233457899


Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ++.++|.+||+.||.+|||++++++||||+..
T Consensus       281 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          281 QAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            99999999999999999999999999999864


No 150
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=2.6e-44  Score=292.29  Aligned_cols=235  Identities=28%  Similarity=0.437  Sum_probs=183.5

Q ss_pred             CCceEEEEEEeecCCCc------cchHHHHHHHHHHHHHhhcCCCceeeeceeee-----cCCcEEEEEeccccCcHHHH
Q 041080            1 DGFFFAVKEVSLQDQGA------QGKQSILQLEQEISLLSQFEQDNIVQYLGTDK-----DENRLYIFLELVTKGSLANL   69 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~   69 (247)
                      +|+.||||++.......      ......+.+.+|+.++++++||||+++++++.     .....++||||+.+ +|.+.
T Consensus        45 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~  123 (362)
T 3pg1_A           45 EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQV  123 (362)
T ss_dssp             TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHH
T ss_pred             CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHH
Confidence            47899999997643321      22334578899999999999999999999984     33478999999985 88887


Q ss_pred             HHhc--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCc
Q 041080           70 YQKY--HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPE  146 (247)
Q Consensus        70 l~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE  146 (247)
                      +...  .+++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+....... .....+++.|+|||
T Consensus       124 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE  203 (362)
T 3pg1_A          124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPE  203 (362)
T ss_dssp             HHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHH
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcH
Confidence            7654  48999999999999999999999999999999999999999999999999986443332 33455888999999


Q ss_pred             ccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhc-----------------------CCCC-------
Q 041080          147 VVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGK-----------------------GELP-------  196 (247)
Q Consensus       147 ~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~-------  196 (247)
                      .+.+.. .++.++|+||||+++|++++|..||...........+..                       ....       
T Consensus       204 ~~~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (362)
T 3pg1_A          204 LVMQFK-GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW  282 (362)
T ss_dssp             HHTTCT-TCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCH
T ss_pred             HhcCCC-CCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhH
Confidence            986533 378999999999999999999999988765554433321                       0011       


Q ss_pred             -CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          197 -SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       197 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                       ......++.+.++|.+||..+|.+|||++++++||||+...
T Consensus       283 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          283 TAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             HHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence             11245688999999999999999999999999999999863


No 151
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.9e-44  Score=288.13  Aligned_cols=229  Identities=29%  Similarity=0.482  Sum_probs=188.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeee--------------cCCcEEEEEeccccCcH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDK--------------DENRLYIFLELVTKGSL   66 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------------~~~~~~lv~e~~~~~~L   66 (247)
                      +|+.||||++...     .....+.+.+|+.++++++||||+++++++.              ..+..++||||+.+ +|
T Consensus        35 ~~~~vaiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L  108 (320)
T 2i6l_A           35 CDKRVAIKKIVLT-----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DL  108 (320)
T ss_dssp             TTEEEEEEEEECC-----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EH
T ss_pred             CCeEEEEEEEecC-----ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccCC-CH
Confidence            4789999999743     3455677889999999999999999998863              44688999999985 99


Q ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc-CCCCeEEcccccccccCcc-----ccccCCCCC
Q 041080           67 ANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVD-ASGSVKLADFGLAKATTMN-----DLKSCKGTP  140 (247)
Q Consensus        67 ~~~l~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~-~~~~~~l~df~~~~~~~~~-----~~~~~~~~~  140 (247)
                      .++++...+++..++.++.|++.||.+||++|++|+||||+||+++ .++.++|+|||.+......     ......++.
T Consensus       109 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  188 (320)
T 2i6l_A          109 ANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK  188 (320)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCC
T ss_pred             HHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccc
Confidence            9999888899999999999999999999999999999999999997 5678999999998754322     122334688


Q ss_pred             CccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC-------------------------
Q 041080          141 FWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL-------------------------  195 (247)
Q Consensus       141 ~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~-------------------------  195 (247)
                      .|+|||.+.+.. .++.++|+||||+++|+|++|..||...........+.....                         
T Consensus       189 ~y~aPE~~~~~~-~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (320)
T 2i6l_A          189 WYRSPRLLLSPN-NYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP  267 (320)
T ss_dssp             TTCCHHHHHCTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSC
T ss_pred             cccCcHHhcCcc-cCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCC
Confidence            899999886432 378999999999999999999999987766554433321110                         


Q ss_pred             ----CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          196 ----PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       196 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                          ......++.++++++.+||+.||.+|||++++++||||+..
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (320)
T 2i6l_A          268 HKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIY  312 (320)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             CCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence                01224689999999999999999999999999999999864


No 152
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=4.8e-44  Score=283.64  Aligned_cols=227  Identities=27%  Similarity=0.478  Sum_probs=180.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec-------------CCcEEEEEeccccCcHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD-------------ENRLYIFLELVTKGSLA   67 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~   67 (247)
                      +|+.||||++..      .....+.+.+|+.++++++||||+++++++.+             .+..++||||+++++|.
T Consensus        30 ~~~~vaiK~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~  103 (303)
T 1zy4_A           30 DSRYYAIKKIRH------TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLY  103 (303)
T ss_dssp             TCCEEEEEEEEE------EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHH
T ss_pred             CCeEEEEEEEec------cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHH
Confidence            588999999964      23456778899999999999999999998754             45789999999999999


Q ss_pred             HHHHhcC--CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcc--------------
Q 041080           68 NLYQKYH--LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMN--------------  131 (247)
Q Consensus        68 ~~l~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~--------------  131 (247)
                      +++...+  +++..++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+......              
T Consensus       104 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  183 (303)
T 1zy4_A          104 DLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS  183 (303)
T ss_dssp             HHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC---------------
T ss_pred             HhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhcccccccccc
Confidence            9997654  778899999999999999999999999999999999999999999999998654321              


Q ss_pred             --ccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCh-hhHHHHHhhcC---CCCCCCCcCCHH
Q 041080          132 --DLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLE-GVQALFRIGKG---ELPSVPSSLSRD  205 (247)
Q Consensus       132 --~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~  205 (247)
                        ......++..|+|||.+.+.. .++.++|+||||+++|+|++   ||.... .......+...   ..+..+...++.
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (303)
T 1zy4_A          184 SDNLTSAIGTAMYVATEVLDGTG-HYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKV  259 (303)
T ss_dssp             ----------CTTSCHHHHTSCS-CCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHH
T ss_pred             ccccccCCCcccccCcccccCCC-CCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHH
Confidence              123345888999999986432 37899999999999999998   554322 22233333222   223445667888


Q ss_pred             HHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          206 ARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       206 ~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                      +++++.+||+.||.+|||++++++||||+...
T Consensus       260 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred             HHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence            99999999999999999999999999998653


No 153
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2.9e-44  Score=282.59  Aligned_cols=221  Identities=22%  Similarity=0.434  Sum_probs=193.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~   79 (247)
                      +..||+|++.....      ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++..  ..+++..
T Consensus        48 ~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  121 (283)
T 3gen_A           48 QYDVAIKMIKEGSM------SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ  121 (283)
T ss_dssp             TEEEEEEEECTTSB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHH
T ss_pred             CCeEEEEEecCCCC------CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHH
Confidence            56899999975432      134578999999999999999999999999999999999999999999976  4699999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---ccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---KSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+........   ....++..|+|||.+.+..  ++
T Consensus       122 ~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  199 (283)
T 3gen_A          122 LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FS  199 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCC--CS
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCC--CC
Confidence            999999999999999999999999999999999999999999999875543322   2333566799999997554  78


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          157 LTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      .++|+||+|+++|++++ |..||...........+........+...++.+.+++.+||+.+|.+|||+++++++
T Consensus       200 ~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            99999999999999998 999999988888888877776667778889999999999999999999999999875


No 154
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=2.3e-44  Score=289.04  Aligned_cols=227  Identities=27%  Similarity=0.449  Sum_probs=183.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeec--CCcEEEEEeccccCcHHHHHHhcCCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKD--ENRLYIFLELVTKGSLANLYQKYHLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~   77 (247)
                      +|+.||||++....        .+.+.+|+.++++++ ||||+++++++..  ....++||||+++++|.++++.  +++
T Consensus        60 ~~~~vavK~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~  129 (330)
T 3nsz_A           60 NNEKVVVKILKPVK--------KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT--LTD  129 (330)
T ss_dssp             TCCEEEEEEECSCC--------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGG--CCH
T ss_pred             CCcEEEEEEecccc--------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHh--CCH
Confidence            47899999986321        346789999999997 9999999999987  6788999999999999998864  899


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC-CeEEcccccccccCcc-ccccCCCCCCccCCcccccCCCCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG-SVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~-~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ..++.++.|++.||.+||++|++|+||||+||+++.++ .++|+|||.+...... ......++..|+|||.+.+.. .+
T Consensus       130 ~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~  208 (330)
T 3nsz_A          130 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ-MY  208 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCC-CC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCC-cC
Confidence            99999999999999999999999999999999999777 8999999998754433 234456888999999986532 37


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhh-HHHH-------------HhhcCC-----------------------CCCC
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGV-QALF-------------RIGKGE-----------------------LPSV  198 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~-~~~~-------------~~~~~~-----------------------~~~~  198 (247)
                      +.++||||||+++++|++|..||...... +...             .+....                       ....
T Consensus       209 ~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (330)
T 3nsz_A          209 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN  288 (330)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTT
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccc
Confidence            89999999999999999999998433211 1111             111100                       0111


Q ss_pred             CCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCC
Q 041080          199 PSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQ  238 (247)
Q Consensus       199 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~  238 (247)
                      +..+++++.++|.+||+.||.+|||++++++||||+....
T Consensus       289 ~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          289 QHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             GGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             cccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            2237999999999999999999999999999999998643


No 155
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=2.1e-44  Score=290.53  Aligned_cols=231  Identities=30%  Similarity=0.527  Sum_probs=186.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHH-HhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-----cC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISL-LSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-----YH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~   74 (247)
                      +|+.||||++.....    ......+..|..+ ++.++||||+++++++...+..++||||+.+ +|.+++..     ..
T Consensus        75 ~~~~vavK~~~~~~~----~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~  149 (340)
T 3an0_A           75 SGQIMAVKRIRATVN----SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQT  149 (340)
T ss_dssp             TTEEEEEEEECSCCC----CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-EHHHHHHHHHHTSCC
T ss_pred             CCCEEEEEEeccccC----cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-cHHHHHHHHHhcCCC
Confidence            478999999975432    2233444455555 7778999999999999999999999999986 99888764     35


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCcccccC-
Q 041080           75 LSDSQVSSYTRQILNGLVYLHER-NVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNSK-  151 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~-  151 (247)
                      +++..++.++.|++.||.|||+. |++|+||||+||+++.++.++|+|||.+....... .....|++.|+|||.+.+. 
T Consensus       150 l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  229 (340)
T 3an0_A          150 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL  229 (340)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHHHSSCCCCCCCHHHHSCCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccccccccCCCCccccCcccccccc
Confidence            99999999999999999999987 99999999999999999999999999986544322 2234689999999997532 


Q ss_pred             -CCCCCcchhHHHHHHHHHHHHhCCCCCCCCh-hhHHHHHhhcCCCCCC-CCcCCHHHHHHHHHHhcCCCCCCCChhhhh
Q 041080          152 -NDGYGLTADIWSLGCTVLEMLTRRPPYSHLE-GVQALFRIGKGELPSV-PSSLSRDARDFILKCLQVNPNDRPTVTELM  228 (247)
Q Consensus       152 -~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~il  228 (247)
                       ...++.++||||||+++|+|++|..||.... .............+.. ...+++++.+++.+||..+|.+|||+++++
T Consensus       230 ~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell  309 (340)
T 3an0_A          230 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM  309 (340)
T ss_dssp             TCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             ccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHh
Confidence             2347899999999999999999999997643 2233333333333333 346899999999999999999999999999


Q ss_pred             cCccCCCC
Q 041080          229 EHPFVKRP  236 (247)
Q Consensus       229 ~~p~~~~~  236 (247)
                      +||||+..
T Consensus       310 ~hp~f~~~  317 (340)
T 3an0_A          310 QHPFFTLH  317 (340)
T ss_dssp             TSHHHHHH
T ss_pred             cCcCcccc
Confidence            99999864


No 156
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=5.1e-44  Score=280.99  Aligned_cols=222  Identities=29%  Similarity=0.487  Sum_probs=182.4

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      +..||+|.+...    ......+.+.+|+.++++++||||+++++++. ++..++||||+++++|.+++...  .+++..
T Consensus        43 ~~~vaiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  117 (281)
T 1mp8_A           43 ALAVAIKTCKNC----TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLAS  117 (281)
T ss_dssp             CEEEEEEECTTT----TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHH
T ss_pred             ceEEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHH
Confidence            446889887542    33456678899999999999999999999974 56789999999999999999765  489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---ccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---KSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........   ....+++.|+|||.+.+..  ++
T Consensus       118 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  195 (281)
T 1mp8_A          118 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR--FT  195 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCC--CS
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCC--CC
Confidence            999999999999999999999999999999999999999999999875543321   2233567899999986544  78


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          157 LTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      .++|+||||+++|++++ |..||......+....+........+..+++.+.+++.+||..+|.+|||+++++++
T Consensus       196 ~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          196 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            89999999999999996 999999888888887777777677788999999999999999999999999999863


No 157
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=8.4e-44  Score=296.84  Aligned_cols=219  Identities=29%  Similarity=0.494  Sum_probs=189.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC-cEEEEEeccccCcHHHHHHhcC---CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN-RLYIFLELVTKGSLANLYQKYH---LS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~---~~   76 (247)
                      +|+.||||++....       ..+.+.+|+.++++++||||+++++++...+ ..++||||+++|+|.+++...+   ++
T Consensus       215 ~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~  287 (450)
T 1k9a_A          215 RGNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG  287 (450)
T ss_dssp             TTEEEEEEEESSCT-------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCC
T ss_pred             cCCeEEEEEeCCch-------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCC
Confidence            36789999996432       3456889999999999999999999976654 7999999999999999997654   68


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      +..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....... ....++..|+|||.+.+..  ++
T Consensus       288 ~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~~~~y~aPE~~~~~~--~~  364 (450)
T 1k9a_A          288 GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWTAPEALREKK--FS  364 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-------CCCTTTSCHHHHHSSC--CC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-cCCCCCcceeCHHHhcCCC--CC
Confidence            99999999999999999999999999999999999999999999999987544322 2235678899999996554  89


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          157 LTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      .++||||||+++|+|++ |..||......+....+..+.....+..+|+++.++|.+||..+|.+|||+.++++
T Consensus       365 ~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          365 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999998 99999988888887777777667778899999999999999999999999999875


No 158
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.2e-44  Score=282.33  Aligned_cols=223  Identities=26%  Similarity=0.445  Sum_probs=193.7

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      |..||||++...    ......+.+.+|+.++++++||||+++++++ ..+..++||||+++++|.+++...  .+++..
T Consensus        37 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  111 (287)
T 1u59_A           37 QIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSN  111 (287)
T ss_dssp             CEEEEEEEECSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHH
T ss_pred             cceEEEEecCCc----cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHH
Confidence            667999999753    2345677899999999999999999999998 456799999999999999998543  489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......     .....++..|+|||.+.+..  
T Consensus       112 ~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  189 (287)
T 1u59_A          112 VAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--  189 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCE--
T ss_pred             HHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCC--
Confidence            99999999999999999999999999999999999999999999987554322     12233567899999986544  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p  231 (247)
                      ++.++|+||||+++++|++ |..||...........+.....+..+..+++++.+++.+||..+|.+|||+++++++.
T Consensus       190 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            7889999999999999998 9999998888877777777777778889999999999999999999999999999854


No 159
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=4e-44  Score=292.06  Aligned_cols=222  Identities=23%  Similarity=0.441  Sum_probs=183.0

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      |..||||++...    ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++.+.  .+++..
T Consensus        73 ~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~  148 (373)
T 2qol_A           73 EISVAIKTLKVG----YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ  148 (373)
T ss_dssp             BCCEEEEECCTT----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHH
T ss_pred             ceeEEEEEecCc----cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHH
Confidence            567999998643    23455677999999999999999999999999999999999999999999999765  489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc-----ccCCCCCCccCCcccccCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL-----KSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      ++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........     ....++..|+|||.+.+..  
T Consensus       149 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  226 (373)
T 2qol_A          149 LVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK--  226 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCC--
Confidence            999999999999999999999999999999999999999999999875543221     1122456799999996554  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++||||||+++|++++ |..||...........+........+..++..+.+++.+||+.+|.+||+++++++
T Consensus       227 ~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            7899999999999999997 99999888877777776666555566788999999999999999999999999876


No 160
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=5.7e-44  Score=278.58  Aligned_cols=222  Identities=22%  Similarity=0.406  Sum_probs=193.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~   78 (247)
                      +++.||+|++.....      ..+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++...  .+++.
T Consensus        31 ~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  104 (267)
T 3t9t_A           31 NKDKVAIKTIREGAM------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE  104 (267)
T ss_dssp             TTEEEEEEEECTTTB------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHH
T ss_pred             CCCeEEEEEccccCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHH
Confidence            367899999975432      2356889999999999999999999999999999999999999999999765  38999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......   .....++..|+|||.+.+..  +
T Consensus       105 ~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  182 (267)
T 3t9t_A          105 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR--Y  182 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCC--C
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCC--c
Confidence            999999999999999999999999999999999999999999999987544322   22334567899999996544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      +.++|+||||+++|+|++ |..||...........+........+...++.+.+++.+||+.+|.+|||+++++++
T Consensus       183 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          183 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            899999999999999999 899999888877777777776666778899999999999999999999999999864


No 161
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=2.6e-44  Score=286.43  Aligned_cols=219  Identities=25%  Similarity=0.466  Sum_probs=182.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||+|++..     ......+.+.+|+.++++++||||+++++++.+++..++||||+++++|.++++.  ..+++.
T Consensus        34 ~~~~va~K~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  108 (310)
T 3s95_A           34 TGEVMVMKELIR-----FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWS  108 (310)
T ss_dssp             TCCEEEEEEESC-----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHH
T ss_pred             CCcEEEEEEecc-----CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHH
Confidence            478899998853     3455677899999999999999999999999999999999999999999999987  358999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc----------------ccCCCCCCc
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL----------------KSCKGTPFW  142 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~----------------~~~~~~~~~  142 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........                ....|++.|
T Consensus       109 ~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (310)
T 3s95_A          109 QRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW  188 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGG
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcce
Confidence            9999999999999999999999999999999999999999999999865432221                134588999


Q ss_pred             cCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHH-----HHHhhcCCCCCCCCcCCHHHHHHHHHHhcCC
Q 041080          143 MAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQA-----LFRIGKGELPSVPSSLSRDARDFILKCLQVN  217 (247)
Q Consensus       143 ~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  217 (247)
                      +|||.+.+..  ++.++||||||+++|++++|..|+........     .....   ....+..+++.+.+++.+||+.+
T Consensus       189 ~aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~d  263 (310)
T 3s95_A          189 MAPEMINGRS--YDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL---DRYCPPNCPPSFFPITVRCCDLD  263 (310)
T ss_dssp             CCHHHHTTCC--CCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH---HHTCCTTCCTTHHHHHHHHTCSS
T ss_pred             eCHHHhcCCC--CCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc---cccCCCCCCHHHHHHHHHHccCC
Confidence            9999996544  78999999999999999999988754322111     00000   01235677889999999999999


Q ss_pred             CCCCCChhhhhc
Q 041080          218 PNDRPTVTELME  229 (247)
Q Consensus       218 p~~Rps~~~il~  229 (247)
                      |.+|||++++++
T Consensus       264 P~~Rps~~~l~~  275 (310)
T 3s95_A          264 PEKRPSFVKLEH  275 (310)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999986


No 162
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=2.1e-44  Score=288.17  Aligned_cols=228  Identities=24%  Similarity=0.402  Sum_probs=182.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC--cEEEEEeccccCcHHHHHHhcC----
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN--RLYIFLELVTKGSLANLYQKYH----   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~----   74 (247)
                      +|+.||||++.....    ....+.+.+|+.++++++||||+++++++...+  ..++||||+++++|.++++...    
T Consensus        33 ~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  108 (319)
T 4euu_A           33 TGDLFAIKVFNNISF----LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG  108 (319)
T ss_dssp             TCCEEEEEEECGGGG----GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTC
T ss_pred             CCcEEEEEEeccccc----cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccC
Confidence            478999999975322    223556779999999999999999999987655  7899999999999999997643    


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE----cCCCCeEEcccccccccCccc-cccCCCCCCccCCcccc
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILV----DASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVN  149 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~----~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~  149 (247)
                      +++..++.++.|++.||.+||+.|++|+||||+||++    +.++.++|+|||.+....... .....++..|+|||.+.
T Consensus       109 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE  188 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhh
Confidence            8999999999999999999999999999999999999    777789999999987654333 33456899999999975


Q ss_pred             cC------CCCCCcchhHHHHHHHHHHHHhCCCCCCCChh----hHHHHHhhcCCC------------------------
Q 041080          150 SK------NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEG----VQALFRIGKGEL------------------------  195 (247)
Q Consensus       150 ~~------~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~----~~~~~~~~~~~~------------------------  195 (247)
                      ..      ...++.++||||||+++|+|++|..||.....    ......+.....                        
T Consensus       189 ~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  268 (319)
T 4euu_A          189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVS  268 (319)
T ss_dssp             HHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTT
T ss_pred             hccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcc
Confidence            21      23478899999999999999999999964332    222222222111                        


Q ss_pred             CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          196 PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       196 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      ..++..+++.+.+++.+||+.||.+|||++|+++||-
T Consensus       269 ~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          269 CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             cccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            0122345678999999999999999999999999884


No 163
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=8.5e-44  Score=292.16  Aligned_cols=225  Identities=28%  Similarity=0.426  Sum_probs=179.7

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC------cEEEEEeccccCcHHHHHH----
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN------RLYIFLELVTKGSLANLYQ----   71 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~l~----   71 (247)
                      +..+|+|++......         ..+|+.+++.++||||+++++++...+      ..++||||++++.+.....    
T Consensus        64 ~~~~aikk~~~~~~~---------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~  134 (394)
T 4e7w_A           64 SDEVAIKKVLQDKRF---------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL  134 (394)
T ss_dssp             TEEEEEEEEECCTTS---------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHT
T ss_pred             CCeEEEEEEecCcch---------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhh
Confidence            445889988654321         127999999999999999999985433      3889999998854433332    


Q ss_pred             hcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc-CCCCeEEcccccccccCcc-ccccCCCCCCccCCcccc
Q 041080           72 KYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVD-ASGSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEVVN  149 (247)
Q Consensus        72 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~-~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~~~  149 (247)
                      ...+++..++.++.|++.||.|||++||+|+||||+||+++ .++.++|+|||.+...... ......+++.|+|||.+.
T Consensus       135 ~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~  214 (394)
T 4e7w_A          135 KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIF  214 (394)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHT
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHc
Confidence            34599999999999999999999999999999999999999 7899999999998754332 334556899999999986


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC-------------------CCC---------CCCCc
Q 041080          150 SKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG-------------------ELP---------SVPSS  201 (247)
Q Consensus       150 ~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~-------------------~~~---------~~~~~  201 (247)
                      +.. .++.++||||+|+++|+|++|..||......+....+...                   ..+         .++..
T Consensus       215 ~~~-~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (394)
T 4e7w_A          215 GAT-NYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPR  293 (394)
T ss_dssp             TCS-SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTT
T ss_pred             CCC-CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhcccc
Confidence            533 2789999999999999999999999887765554433210                   111         12235


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          202 LSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       202 ~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      .++++.++|.+||..||.+|||+.++++||||+..
T Consensus       294 ~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          294 TPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             CCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            78999999999999999999999999999999975


No 164
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=7.4e-44  Score=286.66  Aligned_cols=223  Identities=26%  Similarity=0.486  Sum_probs=193.6

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH------   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------   74 (247)
                      |..||||++...    ......+.+.+|+.+++++ +||||+++++++...+..++||||+++++|.+++....      
T Consensus        67 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  142 (334)
T 2pvf_A           67 AVTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY  142 (334)
T ss_dssp             -CEEEEEECCTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCS
T ss_pred             ceEEEEeeeccC----CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccc
Confidence            567999998643    2345567889999999999 89999999999999999999999999999999997643      


Q ss_pred             -----------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCC
Q 041080           75 -----------LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGT  139 (247)
Q Consensus        75 -----------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~  139 (247)
                                 +++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......    .....++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~  222 (334)
T 2pvf_A          143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP  222 (334)
T ss_dssp             CC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCC
T ss_pred             cccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcc
Confidence                       7899999999999999999999999999999999999999999999999986544322    2233456


Q ss_pred             CCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCC
Q 041080          140 PFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNP  218 (247)
Q Consensus       140 ~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (247)
                      ..|+|||.+.+..  ++.++||||||+++|+|++ |..||...........+........+..++.++.+++.+||..+|
T Consensus       223 ~~y~aPE~~~~~~--~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  300 (334)
T 2pvf_A          223 VKWMAPEALFDRV--YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVP  300 (334)
T ss_dssp             GGGCCHHHHHHCE--ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             cceeChHHhcCCC--cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCCh
Confidence            7899999986544  7899999999999999999 999999888777777777766667788899999999999999999


Q ss_pred             CCCCChhhhhcC
Q 041080          219 NDRPTVTELMEH  230 (247)
Q Consensus       219 ~~Rps~~~il~~  230 (247)
                      .+|||+++++++
T Consensus       301 ~~Rps~~ell~~  312 (334)
T 2pvf_A          301 SQRPTFKQLVED  312 (334)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999863


No 165
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=3.2e-44  Score=291.45  Aligned_cols=223  Identities=26%  Similarity=0.468  Sum_probs=187.2

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCC-cEEEEEeccccCcHHHHHHhcC-----
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDEN-RLYIFLELVTKGSLANLYQKYH-----   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~-----   74 (247)
                      |+.||||++...    ......+.+.+|+.++.++ +||||+++++++.+.+ ..++||||+++|+|.+++....     
T Consensus        52 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~  127 (359)
T 3vhe_A           52 CRTVAVKMLKEG----ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP  127 (359)
T ss_dssp             EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCS
T ss_pred             ceEEEEEEecCc----CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccc
Confidence            578999999643    3344567789999999999 7899999999988755 4899999999999999987542     


Q ss_pred             --------------------------------------------------------------CCHHHHHHHHHHHHHHHH
Q 041080           75 --------------------------------------------------------------LSDSQVSSYTRQILNGLV   92 (247)
Q Consensus        75 --------------------------------------------------------------~~~~~~~~~~~~l~~~l~   92 (247)
                                                                                    +++..++.++.|++.||.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~  207 (359)
T 3vhe_A          128 YKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME  207 (359)
T ss_dssp             CC------------------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHH
Confidence                                                                          889999999999999999


Q ss_pred             HhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHH
Q 041080           93 YLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTV  168 (247)
Q Consensus        93 ~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll  168 (247)
                      |||++|++|+||||+||+++.++.++|+|||.+.......    .....++..|+|||.+.+..  ++.++||||||+++
T Consensus       208 ~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il  285 (359)
T 3vhe_A          208 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV--YTIQSDVWSFGVLL  285 (359)
T ss_dssp             HHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCC--CCHHHHHHHHHHHH
T ss_pred             HHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCC--CCchhhhhhHHHHH
Confidence            9999999999999999999999999999999987543322    22344677899999987544  78999999999999


Q ss_pred             HHHHh-CCCCCCCChhhHH-HHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          169 LEMLT-RRPPYSHLEGVQA-LFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       169 ~~l~~-g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      |+|++ |..||........ ...+........+..+++++.+++.+||..+|.+|||++++++|
T Consensus       286 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          286 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            99998 9999977654433 34444455566778899999999999999999999999999875


No 166
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=6.4e-44  Score=285.58  Aligned_cols=223  Identities=26%  Similarity=0.428  Sum_probs=193.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh---------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK---------   72 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---------   72 (247)
                      |+.||||.+...    ........+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++..         
T Consensus        55 ~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  130 (322)
T 1p4o_A           55 ETRVAIKTVNEA----ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP  130 (322)
T ss_dssp             EEEEEEEECCTT----SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCT
T ss_pred             ceEEEEEecccc----cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCC
Confidence            567999998643    2344566788999999999999999999999999999999999999999999865         


Q ss_pred             --cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCc
Q 041080           73 --YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPE  146 (247)
Q Consensus        73 --~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE  146 (247)
                        ..+++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......    .....+++.|+|||
T Consensus       131 ~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  210 (322)
T 1p4o_A          131 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE  210 (322)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHH
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChh
Confidence              246899999999999999999999999999999999999999999999999987544332    12233577899999


Q ss_pred             ccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChh
Q 041080          147 VVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVT  225 (247)
Q Consensus       147 ~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (247)
                      .+.+..  ++.++|+||||+++|+|++ |..||...........+........+..+++.+.+++.+||..+|.+|||++
T Consensus       211 ~~~~~~--~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  288 (322)
T 1p4o_A          211 SLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL  288 (322)
T ss_dssp             HHHHCC--CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hhccCC--CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence            986544  7899999999999999999 8999998888888777777777777889999999999999999999999999


Q ss_pred             hhhcC
Q 041080          226 ELMEH  230 (247)
Q Consensus       226 ~il~~  230 (247)
                      +++++
T Consensus       289 e~l~~  293 (322)
T 1p4o_A          289 EIISS  293 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99985


No 167
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=9.8e-44  Score=286.08  Aligned_cols=226  Identities=24%  Similarity=0.335  Sum_probs=185.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCC------ceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQD------NIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++..      .....+.+.+|+.+++.++|+      +++++++++...+..++||||+ +++|.+++...+
T Consensus        39 ~~~~vavK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~  111 (339)
T 1z57_A           39 GGRHVAVKIVKN------VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENG  111 (339)
T ss_dssp             TTEEEEEEEECS------SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTT
T ss_pred             CCcEEEEEEEec------CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcC
Confidence            478899999853      234456788999999988765      4999999999999999999999 779999887653


Q ss_pred             ---CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC-------------------CCCeEEcccccccccCccc
Q 041080           75 ---LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA-------------------SGSVKLADFGLAKATTMND  132 (247)
Q Consensus        75 ---~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~-------------------~~~~~l~df~~~~~~~~~~  132 (247)
                         +++..++.++.|++.||.+||++|++|+||||+||+++.                   ++.++|+|||.+...... 
T Consensus       112 ~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-  190 (339)
T 1z57_A          112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-  190 (339)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc-
Confidence               889999999999999999999999999999999999987                   668999999998754432 


Q ss_pred             cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC--CC---------------
Q 041080          133 LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG--EL---------------  195 (247)
Q Consensus       133 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~--~~---------------  195 (247)
                      .....+++.|+|||.+.+..  ++.++|+||||+++|++++|..||...+..+....+...  ..               
T Consensus       191 ~~~~~gt~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  268 (339)
T 1z57_A          191 HSTLVSTRHYRAPEVILALG--WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFH  268 (339)
T ss_dssp             CCSSCSCGGGCCHHHHTTSC--CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred             cccccCCccccChHHhhCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence            33456899999999996544  789999999999999999999999877655543322110  00               


Q ss_pred             --------------------------CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          196 --------------------------PSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       196 --------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                                                ...+...++++.+++.+||..||.+|||++++++||||+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                                      01122346789999999999999999999999999999875


No 168
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.1e-43  Score=293.69  Aligned_cols=225  Identities=27%  Similarity=0.409  Sum_probs=179.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC------CcEEEEEeccccCcHHHHHHh--
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE------NRLYIFLELVTKGSLANLYQK--   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~~~L~~~l~~--   72 (247)
                      +|+.||||++.....         ...+|+.+++.++||||+++++++...      ..+++||||+++ +|.+.+..  
T Consensus        78 ~~~~vaiK~~~~~~~---------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~  147 (420)
T 1j1b_A           78 SGELVAIKKVLQDKR---------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYS  147 (420)
T ss_dssp             TCCEEEEEEEECCTT---------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHH
T ss_pred             CCcEEEEEEecccch---------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHh
Confidence            488999999965321         123799999999999999999987432      246799999987 66665542  


Q ss_pred             ---cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC-CCeEEcccccccccCcc-ccccCCCCCCccCCcc
Q 041080           73 ---YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS-GSVKLADFGLAKATTMN-DLKSCKGTPFWMAPEV  147 (247)
Q Consensus        73 ---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~-~~~~l~df~~~~~~~~~-~~~~~~~~~~~~aPE~  147 (247)
                         ..+++..++.++.|++.||.|||++||+|+||||+||+++.+ +.++|+|||++...... ......+++.|+|||.
T Consensus       148 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~  227 (420)
T 1j1b_A          148 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL  227 (420)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHH
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHH
Confidence               359999999999999999999999999999999999999965 56899999999754332 2344568999999999


Q ss_pred             cccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC-------------------CCCC---------CC
Q 041080          148 VNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG-------------------ELPS---------VP  199 (247)
Q Consensus       148 ~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~---------~~  199 (247)
                      +.+.. .++.++|||||||++|+|++|+.||......+....+...                   ..+.         ++
T Consensus       228 ~~~~~-~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  306 (420)
T 1j1b_A          228 IFGAT-DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR  306 (420)
T ss_dssp             HTTCS-SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSC
T ss_pred             HcCCC-CCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcC
Confidence            86532 3789999999999999999999999887655544332210                   1111         23


Q ss_pred             CcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          200 SSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       200 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                      ...++++.+||.+||..||.+|||++++++||||+..
T Consensus       307 ~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          307 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             CCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence            4578999999999999999999999999999999864


No 169
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.1e-43  Score=280.51  Aligned_cols=222  Identities=25%  Similarity=0.433  Sum_probs=189.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC-CCHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH-LSDSQV   80 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~   80 (247)
                      |+.||||++....   ......+.+.+|+.+++.++||||+++++++ ..+..++||||+++++|.+++...+ +++..+
T Consensus        44 ~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  119 (291)
T 1xbb_A           44 VKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI  119 (291)
T ss_dssp             EEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHH
T ss_pred             eeeEEEEeecccc---cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHH
Confidence            5789999997542   2234466789999999999999999999998 5668899999999999999998754 999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc-----ccCCCCCCccCCcccccCCCCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL-----KSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      +.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........     ....++..|+|||.+.+..  +
T Consensus       120 ~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  197 (291)
T 1xbb_A          120 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--F  197 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCE--E
T ss_pred             HHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCC--C
Confidence            99999999999999999999999999999999999999999999865443321     1223567799999986544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++|+||||+++|+|++ |..||...........+.....+..+..+++.+.+++.+||+.+|.+|||+.++++
T Consensus       198 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          198 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            889999999999999999 99999988888877777777777778899999999999999999999999999975


No 170
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.1e-43  Score=279.82  Aligned_cols=220  Identities=27%  Similarity=0.465  Sum_probs=192.8

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc---CCCHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY---HLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~   78 (247)
                      |+.||+|.+...      ....+.+.+|+.++++++||||+++++++.+.+..++||||+++++|.+++...   .+++.
T Consensus        38 ~~~vaiK~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~  111 (288)
T 3kfa_A           38 SLTVAVKTLKED------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV  111 (288)
T ss_dssp             TEEEEEEEECSC------STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHH
T ss_pred             CEEEEEEecCcC------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHh
Confidence            678999999642      224567889999999999999999999999999999999999999999999763   38999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---ccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---KSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........   ....++..|+|||.+.+..  +
T Consensus       112 ~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  189 (288)
T 3kfa_A          112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--F  189 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCC--C
T ss_pred             HHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCC--C
Confidence            9999999999999999999999999999999999999999999999876543332   2223567799999996554  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++|+||||+++++|++ |..||...........+........+..+++.+.+++.+||..+|.+|||++++++
T Consensus       190 ~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            899999999999999999 99999988887777777777667778889999999999999999999999999976


No 171
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=5.2e-44  Score=286.78  Aligned_cols=227  Identities=25%  Similarity=0.392  Sum_probs=194.4

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC-------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH-------   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-------   74 (247)
                      |+.||||++...    ........+.+|+.++++++||||+++++++...+..++||||+++++|.+++....       
T Consensus        60 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  135 (327)
T 2yfx_A           60 PLQVAVKTLPEV----CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS  135 (327)
T ss_dssp             CCEEEEEECCSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTT
T ss_pred             cceEEEEEeccc----cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccc
Confidence            668999999642    234456678899999999999999999999999999999999999999999997643       


Q ss_pred             -CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC---CCeEEcccccccccCccc----cccCCCCCCccCCc
Q 041080           75 -LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS---GSVKLADFGLAKATTMND----LKSCKGTPFWMAPE  146 (247)
Q Consensus        75 -~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~---~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE  146 (247)
                       +++..++.++.|++.||.+||+.|++|+||||+||+++.+   ..++|+|||.+.......    .....++..|+|||
T Consensus       136 ~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  215 (327)
T 2yfx_A          136 SLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE  215 (327)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHh
Confidence             8899999999999999999999999999999999999844   469999999885432221    22234678899999


Q ss_pred             ccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChh
Q 041080          147 VVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVT  225 (247)
Q Consensus       147 ~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  225 (247)
                      .+.+..  ++.++|+||||+++|+|++ |..||...........+........+..+++.+.+++.+||+.+|.+|||++
T Consensus       216 ~~~~~~--~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  293 (327)
T 2yfx_A          216 AFMEGI--FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA  293 (327)
T ss_dssp             HHHHCC--CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HhcCCC--CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence            986544  7899999999999999998 9999988887777777777766777888999999999999999999999999


Q ss_pred             hhhcCccCC
Q 041080          226 ELMEHPFVK  234 (247)
Q Consensus       226 ~il~~p~~~  234 (247)
                      +++++.|+-
T Consensus       294 ~ll~~l~~~  302 (327)
T 2yfx_A          294 IILERIEYC  302 (327)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999987653


No 172
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=1.7e-44  Score=288.77  Aligned_cols=230  Identities=27%  Similarity=0.428  Sum_probs=191.4

Q ss_pred             CCceEEEEEEeecCCCccch-HHHHHHHHHHHHHhhcC--CCceeeeceeeecCCcEEEEEecccc-CcHHHHHHhc-CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGK-QSILQLEQEISLLSQFE--QDNIVQYLGTDKDENRLYIFLELVTK-GSLANLYQKY-HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~-~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~-~~   75 (247)
                      +|+.||||++.......... ...+.+.+|+.++++++  |+||+++++++...+..++|+|++.+ ++|.+++... .+
T Consensus        67 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l  146 (320)
T 3a99_A           67 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL  146 (320)
T ss_dssp             TTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSC
T ss_pred             CCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCC
Confidence            47899999998754322111 12234568999999996  59999999999999999999999975 7999988764 58


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc-CCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVD-ASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      ++..++.++.|++.||.+||+.|++|+||||+||+++ .++.++|+|||.+............+++.|+|||.+.+... 
T Consensus       147 ~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-  225 (320)
T 3a99_A          147 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY-  225 (320)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCB-
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCC-
Confidence            9999999999999999999999999999999999999 77899999999987766555556678999999999865442 


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCC
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVK  234 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~  234 (247)
                      .+.++|+||||+++|+|++|..||.....      .... ....+..+++++.+++.+||+.+|.+|||++++++||||+
T Consensus       226 ~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~  298 (320)
T 3a99_A          226 HGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRG-QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ  298 (320)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHC-CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             CCccchHHhHHHHHHHHHHCCCCCCChhh------hhcc-cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhc
Confidence            36789999999999999999999976432      1111 2345667899999999999999999999999999999999


Q ss_pred             CCCC
Q 041080          235 RPLQ  238 (247)
Q Consensus       235 ~~~~  238 (247)
                      ..+.
T Consensus       299 ~~~~  302 (320)
T 3a99_A          299 DVLL  302 (320)
T ss_dssp             SCCC
T ss_pred             CccC
Confidence            8653


No 173
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.3e-43  Score=280.50  Aligned_cols=222  Identities=27%  Similarity=0.486  Sum_probs=182.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec--CCcEEEEEeccccCcHHHHHHhcC--CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD--ENRLYIFLELVTKGSLANLYQKYH--LS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~--~~   76 (247)
                      +|+.||||++..     ......+.+.+|+.++++++||||+++++++..  ....++||||+++++|.+++....  ++
T Consensus        38 ~~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  112 (295)
T 3ugc_A           38 TGEVVAVKKLQH-----STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID  112 (295)
T ss_dssp             CCEEEEEEEESC-----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCC
T ss_pred             CCcEEEEEEccc-----CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccC
Confidence            478899999864     234556778999999999999999999998754  356899999999999999997654  99


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~  151 (247)
                      +..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+.
T Consensus       113 ~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (295)
T 3ugc_A          113 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES  192 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCC
Confidence            99999999999999999999999999999999999999999999999987554332     1223355679999999765


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh----------------HHHHHhhcCCCCCCCCcCCHHHHHHHHHHhc
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV----------------QALFRIGKGELPSVPSSLSRDARDFILKCLQ  215 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  215 (247)
                      .  ++.++||||||++++++++|..|+......                .....+........+..+++++.+++.+||.
T Consensus       193 ~--~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  270 (295)
T 3ugc_A          193 K--FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN  270 (295)
T ss_dssp             C--CCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSC
T ss_pred             C--CChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcC
Confidence            4  799999999999999999999887654322                2223334444556677899999999999999


Q ss_pred             CCCCCCCChhhhhc
Q 041080          216 VNPNDRPTVTELME  229 (247)
Q Consensus       216 ~~p~~Rps~~~il~  229 (247)
                      .+|.+|||++++++
T Consensus       271 ~dp~~Rps~~el~~  284 (295)
T 3ugc_A          271 NNVNQRPSFRDLAL  284 (295)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999975


No 174
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=3.6e-43  Score=280.26  Aligned_cols=233  Identities=26%  Similarity=0.487  Sum_probs=186.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC--CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE--QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~   77 (247)
                      +|+.||||++....   ......+.+.+|+.++.+++  |+||+++++++...+..++|||+ .+++|.+++... .+++
T Consensus        51 ~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~~~~~  126 (313)
T 3cek_A           51 KKQIYAIKYVNLEE---ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP  126 (313)
T ss_dssp             TCCEEEEEEEECSS---CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHCSSCCH
T ss_pred             CCcEEEEEEecccc---ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEec-CCCcHHHHHHhcCCCCH
Confidence            47889999997643   23456678899999999997  59999999999999999999995 467999998764 5899


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccC--
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSK--  151 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~--  151 (247)
                      ..++.++.|++.||.+||+.|++|+||||+||+++ ++.++|+|||.+.......    .....+++.|+|||.+.+.  
T Consensus       127 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  205 (313)
T 3cek_A          127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS  205 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhccc
Confidence            99999999999999999999999999999999996 5899999999987554332    1234588999999998642  


Q ss_pred             -------CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh-HHHHH-hhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCC
Q 041080          152 -------NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV-QALFR-IGKGELPSVPSSLSRDARDFILKCLQVNPNDRP  222 (247)
Q Consensus       152 -------~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  222 (247)
                             ...++.++|+||||+++++|++|..||...... ..... .........+...+.++.+++.+||..+|.+||
T Consensus       206 ~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  285 (313)
T 3cek_A          206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI  285 (313)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSC
T ss_pred             ccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCc
Confidence                   124788999999999999999999999765332 22222 222333455667799999999999999999999


Q ss_pred             ChhhhhcCccCCCCCC
Q 041080          223 TVTELMEHPFVKRPLQ  238 (247)
Q Consensus       223 s~~~il~~p~~~~~~~  238 (247)
                      |++++++||||+....
T Consensus       286 s~~ell~h~~~~~~~~  301 (313)
T 3cek_A          286 SIPELLAHPYVQIQTH  301 (313)
T ss_dssp             CHHHHHTSHHHHCC--
T ss_pred             CHHHHhcCccccCCCC
Confidence            9999999999997543


No 175
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.2e-43  Score=282.11  Aligned_cols=221  Identities=24%  Similarity=0.430  Sum_probs=186.6

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHHH
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQV   80 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~   80 (247)
                      ..||||++...    ........+.+|+.++++++||||+++++++...+..++||||+++++|.+++...  .+++..+
T Consensus        74 ~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  149 (333)
T 1mqb_A           74 VPVAIKTLKAG----YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL  149 (333)
T ss_dssp             EEEEEEEECTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHH
T ss_pred             ccEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHH
Confidence            45999998643    23445667889999999999999999999999999999999999999999999764  4899999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc-----ccCCCCCCccCCcccccCCCCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL-----KSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      +.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........     ....++..|+|||.+.+..  +
T Consensus       150 ~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  227 (333)
T 1mqb_A          150 VGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK--F  227 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCC--C
T ss_pred             HHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCC--C
Confidence            99999999999999999999999999999999999999999999875543221     1223466799999986544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++|+||||+++|++++ |..||...........+..+.....+..+++.+.+++.+||+.+|.+||++.++++
T Consensus       228 ~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  302 (333)
T 1mqb_A          228 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  302 (333)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999998 99999888877777777766666667789999999999999999999999999876


No 176
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.5e-43  Score=283.00  Aligned_cols=223  Identities=28%  Similarity=0.491  Sum_probs=188.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC--CcEEEEEeccccCcHHHHHHhcCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE--NRLYIFLELVTKGSLANLYQKYHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~   78 (247)
                      +|+.||||++...    ......+.+.+|+.++++++||||+++++++.+.  ...++||||+++++|.+++...++++.
T Consensus        59 ~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  134 (318)
T 3lxp_A           59 TGEMVAVKALKAD----AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLA  134 (318)
T ss_dssp             CCEEEEEEEECTT----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHH
T ss_pred             CCcEEEEEEeccc----cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHH
Confidence            4788999999753    3345577789999999999999999999998874  678999999999999999999899999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      .++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+.. 
T Consensus       135 ~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-  213 (318)
T 3lxp_A          135 QLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK-  213 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCE-
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCC-
Confidence            999999999999999999999999999999999999999999999987654332     22344677799999996554 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhh---------------HHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCC
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGV---------------QALFRIGKGELPSVPSSLSRDARDFILKCLQVNP  218 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (247)
                       ++.++|+||||+++++|++|..||......               .....+........+..+++++.+++.+||+.+|
T Consensus       214 -~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  292 (318)
T 3lxp_A          214 -FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEA  292 (318)
T ss_dssp             -EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             -CCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCc
Confidence             788999999999999999999998654322               1223334444556678899999999999999999


Q ss_pred             CCCCChhhhhc
Q 041080          219 NDRPTVTELME  229 (247)
Q Consensus       219 ~~Rps~~~il~  229 (247)
                      .+|||++++++
T Consensus       293 ~~Rps~~ell~  303 (318)
T 3lxp_A          293 SFRPTFENLIP  303 (318)
T ss_dssp             GGSCCHHHHHH
T ss_pred             ccCcCHHHHHH
Confidence            99999999985


No 177
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=4.5e-44  Score=288.09  Aligned_cols=226  Identities=29%  Similarity=0.453  Sum_probs=159.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec----CCcEEEEEeccccCcHHHHHHhc---
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD----ENRLYIFLELVTKGSLANLYQKY---   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~---   73 (247)
                      +|+.||||++...      ....   .+....++.++||||+++++++..    +...++||||+++++|.+++...   
T Consensus        53 ~~~~vavK~~~~~------~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~  123 (336)
T 3fhr_A           53 TGQKCALKLLYDS------PKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQ  123 (336)
T ss_dssp             TCCEEEEEEEESS------HHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CC
T ss_pred             CCCEEEEEEecCc------HHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCC
Confidence            4889999999642      1111   122334566689999999999876    45689999999999999999775   


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC---CCeEEcccccccccCccccccCCCCCCccCCccccc
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS---GSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNS  150 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~  150 (247)
                      .+++..++.++.|++.||.+||+.|++|+||||+||+++.+   +.++|+|||.+............+++.|+|||.+.+
T Consensus       124 ~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~  203 (336)
T 3fhr_A          124 AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGP  203 (336)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCC
Confidence            48999999999999999999999999999999999999864   459999999997666555556678999999999854


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHH----HhhcC---CCCCCCCcCCHHHHHHHHHHhcCCCCCCCC
Q 041080          151 KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALF----RIGKG---ELPSVPSSLSRDARDFILKCLQVNPNDRPT  223 (247)
Q Consensus       151 ~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  223 (247)
                      ..  ++.++|+||||+++|+|++|..||..........    .+...   ........+++++++++.+||..+|.+|||
T Consensus       204 ~~--~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  281 (336)
T 3fhr_A          204 EK--YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT  281 (336)
T ss_dssp             CH--HHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CC--CCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcC
Confidence            44  7889999999999999999999997655443321    11111   111222578999999999999999999999


Q ss_pred             hhhhhcCccCCCCC
Q 041080          224 VTELMEHPFVKRPL  237 (247)
Q Consensus       224 ~~~il~~p~~~~~~  237 (247)
                      ++++++||||+...
T Consensus       282 ~~ell~hp~~~~~~  295 (336)
T 3fhr_A          282 ITQFMNHPWINQSM  295 (336)
T ss_dssp             HHHHHHSHHHHTGG
T ss_pred             HHHHhcCccccccc
Confidence            99999999998754


No 178
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=1.6e-43  Score=283.97  Aligned_cols=220  Identities=25%  Similarity=0.470  Sum_probs=187.1

Q ss_pred             EEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc----------
Q 041080            5 FAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY----------   73 (247)
Q Consensus         5 ~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------   73 (247)
                      +|+|.+....    .....+.+.+|+.+++++ +||||+++++++.+.+..++||||+++++|.+++...          
T Consensus        55 v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  130 (327)
T 1fvr_A           55 AAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA  130 (327)
T ss_dssp             EEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHH
T ss_pred             eeeeeecccc----chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhccccccccccc
Confidence            4889886432    233455688999999999 8999999999999999999999999999999999764          


Q ss_pred             -------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCC
Q 041080           74 -------HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAP  145 (247)
Q Consensus        74 -------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aP  145 (247)
                             .+++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+....... .....++..|+||
T Consensus       131 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aP  210 (327)
T 1fvr_A          131 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI  210 (327)
T ss_dssp             HHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCH
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccCh
Confidence                   48999999999999999999999999999999999999999999999999986433222 2233467789999


Q ss_pred             cccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh
Q 041080          146 EVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV  224 (247)
Q Consensus       146 E~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (247)
                      |.+.+..  ++.++|+||||+++|+|++ |..||...........+........+..+++++.+++.+||..+|.+|||+
T Consensus       211 E~~~~~~--~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  288 (327)
T 1fvr_A          211 ESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF  288 (327)
T ss_dssp             HHHHHCE--ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hhhcccc--CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            9986544  7889999999999999998 999999888888877777776667778899999999999999999999999


Q ss_pred             hhhhcC
Q 041080          225 TELMEH  230 (247)
Q Consensus       225 ~~il~~  230 (247)
                      ++++++
T Consensus       289 ~ell~~  294 (327)
T 1fvr_A          289 AQILVS  294 (327)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999873


No 179
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=5.5e-44  Score=284.79  Aligned_cols=230  Identities=24%  Similarity=0.399  Sum_probs=184.5

Q ss_pred             CCceEEEEEEeecCCCcc-chHHHHHHHHHHHHHhhc----CCCceeeeceeeecCCcEEEEEec-cccCcHHHHHHhc-
Q 041080            1 DGFFFAVKEVSLQDQGAQ-GKQSILQLEQEISLLSQF----EQDNIVQYLGTDKDENRLYIFLEL-VTKGSLANLYQKY-   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~-~~~~~~~~~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~lv~e~-~~~~~L~~~l~~~-   73 (247)
                      +|+.||||++........ .......+.+|+.++.++    +|+||+++++++...+..++|+|+ +.+++|.+++.+. 
T Consensus        55 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~  134 (312)
T 2iwi_A           55 DRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG  134 (312)
T ss_dssp             TCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC
T ss_pred             CCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC
Confidence            478999999976543211 112334466799999998    899999999999999999999999 7889999998765 


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc-CCCCeEEcccccccccCccccccCCCCCCccCCcccccCC
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVD-ASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  152 (247)
                      .+++..++.++.|++.||.+||+.|++|+||+|+||+++ .++.++|+|||.+............++..|+|||.+.+..
T Consensus       135 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  214 (312)
T 2iwi_A          135 PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQ  214 (312)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCC
Confidence            499999999999999999999999999999999999999 7899999999998776666666667899999999986543


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCcc
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~  232 (247)
                      . .+.++|+||||+++|++++|..||.....  .    .. .....+..++..+.+++.+||..+|.+|||++++++|||
T Consensus       215 ~-~~~~~Di~slG~il~~l~~g~~pf~~~~~--~----~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~  286 (312)
T 2iwi_A          215 Y-HALPATVWSLGILLYDMVCGDIPFERDQE--I----LE-AELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW  286 (312)
T ss_dssp             B-CHHHHHHHHHHHHHHHHHHSSCSCCSHHH--H----HH-TCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred             C-CCccchHHHHHHHHHHHHHCCCCCCChHH--H----hh-hccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence            2 35589999999999999999999975432  1    11 123456788999999999999999999999999999999


Q ss_pred             CCCCCC
Q 041080          233 VKRPLQ  238 (247)
Q Consensus       233 ~~~~~~  238 (247)
                      |+...+
T Consensus       287 ~~~~~~  292 (312)
T 2iwi_A          287 MQTPAE  292 (312)
T ss_dssp             TCC---
T ss_pred             hcCchh
Confidence            997543


No 180
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=6.4e-43  Score=275.45  Aligned_cols=226  Identities=24%  Similarity=0.435  Sum_probs=185.9

Q ss_pred             CCceEEEEEEeecCCCccch--HHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGK--QSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~   76 (247)
                      +|+.||||++..........  ...+.+.+|+.++++++||||+++++++.+..  ++||||+++++|.+.+...  .++
T Consensus        43 ~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~  120 (287)
T 4f0f_A           43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIK  120 (287)
T ss_dssp             TCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCC
T ss_pred             CceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCcc
Confidence            47899999997654322111  11267889999999999999999999987665  6999999999998888543  589


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCcEEEcCCCC-----eEEcccccccccCccccccCCCCCCccCCcccc
Q 041080           77 DSQVSSYTRQILNGLVYLHERN--VVHRDIKCANILVDASGS-----VKLADFGLAKATTMNDLKSCKGTPFWMAPEVVN  149 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~~~ni~~~~~~~-----~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~  149 (247)
                      +..++.++.|++.||.+||+.|  ++|+||||+||+++.++.     ++|+|||.+..... ......+++.|+|||.+.
T Consensus       121 ~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~-~~~~~~g~~~y~aPE~~~  199 (287)
T 4f0f_A          121 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH-SVSGLLGNFQWMAPETIG  199 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS-CEECCCCCCTTSCGGGSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc-cccccCCCccccCchhhc
Confidence            9999999999999999999999  999999999999988776     99999999875443 334456899999999986


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHH--HHH-hhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhh
Q 041080          150 SKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQA--LFR-IGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTE  226 (247)
Q Consensus       150 ~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  226 (247)
                      .....++.++|+||||+++|+|++|..||........  ... ......+..+..+++++.+++.+||+.+|.+|||+++
T Consensus       200 ~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  279 (287)
T 4f0f_A          200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSY  279 (287)
T ss_dssp             CSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHH
Confidence            5555578899999999999999999999976554333  222 2334455677889999999999999999999999999


Q ss_pred             hhc
Q 041080          227 LME  229 (247)
Q Consensus       227 il~  229 (247)
                      +++
T Consensus       280 ll~  282 (287)
T 4f0f_A          280 IVK  282 (287)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            985


No 181
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=9.9e-44  Score=285.13  Aligned_cols=219  Identities=26%  Similarity=0.456  Sum_probs=183.7

Q ss_pred             EEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHHHHH
Q 041080            5 FAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQVSS   82 (247)
Q Consensus         5 ~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~   82 (247)
                      ||+|.+...    ......+.+.+|+.++++++||||+++++++..+. .+++++|+.+++|.+++...  .+++..++.
T Consensus        47 vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~  121 (327)
T 3poz_A           47 VAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN  121 (327)
T ss_dssp             EEEEEC-----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHH
T ss_pred             EEEeecccc----cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHH
Confidence            466666432    23344567889999999999999999999998764 78999999999999998764  489999999


Q ss_pred             HHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccCCCCCCcc
Q 041080           83 YTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        83 ~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......    .....++..|+|||.+.+..  ++.+
T Consensus       122 ~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~  199 (327)
T 3poz_A          122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQ  199 (327)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCC--CCHH
T ss_pred             HHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCC--CCch
Confidence            99999999999999999999999999999999999999999986543222    12233567899999997654  7899


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          159 ADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       159 ~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      +||||||+++|++++ |..||...........+........+...+.++.+++.+||+.+|.+|||+.+++++
T Consensus       200 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             hhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            999999999999999 999999888877777777776667788899999999999999999999999999864


No 182
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=2e-43  Score=277.59  Aligned_cols=221  Identities=27%  Similarity=0.463  Sum_probs=187.6

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHHH
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQV   80 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~   80 (247)
                      ..||+|.+...    ......+.+.+|+.++++++||||+++++++..+ ..++||||+++++|.+++.+.  .+++..+
T Consensus        41 ~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~  115 (281)
T 3cc6_A           41 INVAVKTCKKD----CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTL  115 (281)
T ss_dssp             EEEEEEECCTT----SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHH
T ss_pred             ceEEEEecccc----cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHH
Confidence            45899988653    2344567789999999999999999999998654 568999999999999999764  3899999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCCCCc
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDGYGL  157 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~  157 (247)
                      +.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......   .....++..|+|||.+.+..  ++.
T Consensus       116 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~  193 (281)
T 3cc6_A          116 VLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR--FTT  193 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCC--CCH
T ss_pred             HHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCC--CCc
Confidence            9999999999999999999999999999999999999999999987554332   12333567899999986544  789


Q ss_pred             chhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          158 TADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       158 ~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      ++|+||||+++|++++ |..||...........+........+..+++.+.+++.+||..+|.+|||+++++++
T Consensus       194 ~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            9999999999999998 999998877777777776666666778899999999999999999999999999864


No 183
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=5.1e-43  Score=279.77  Aligned_cols=231  Identities=30%  Similarity=0.529  Sum_probs=178.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~   78 (247)
                      +|+.||||++.....   .....+.+.++..+++.++||||+++++++...+..++||||+ ++.+..+...  ..+++.
T Consensus        49 ~~~~vavK~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~  124 (318)
T 2dyl_A           49 TGHVIAVKQMRRSGN---KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPER  124 (318)
T ss_dssp             TCCEEEEEEEETTSC---HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHH
T ss_pred             CCeEEEEEEeccccc---chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHH
Confidence            488999999976432   2233344555566788889999999999999999999999999 5567666654  459999


Q ss_pred             HHHHHHHHHHHHHHHhhhC-CeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCCCccCCccccc---CCC
Q 041080           79 QVSSYTRQILNGLVYLHER-NVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVNS---KND  153 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~-~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~~---~~~  153 (247)
                      .++.++.|++.||.+||+. |++|+||+|+||+++.++.++|+|||.+....... .....+++.|+|||.+..   ...
T Consensus       125 ~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  204 (318)
T 2dyl_A          125 ILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKP  204 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC-------
T ss_pred             HHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhccccccccc
Confidence            9999999999999999995 99999999999999999999999999986543322 233458899999999853   223


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCh-hhHHHHHhhcCCCCCCC--CcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLE-GVQALFRIGKGELPSVP--SSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      .++.++||||||+++|+|++|..||.... .......+.....+..+  ..+++++.+++.+||+.+|.+|||++++++|
T Consensus       205 ~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          205 DYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            37889999999999999999999997643 33344444444433333  4689999999999999999999999999999


Q ss_pred             ccCCC
Q 041080          231 PFVKR  235 (247)
Q Consensus       231 p~~~~  235 (247)
                      |||+.
T Consensus       285 ~~~~~  289 (318)
T 2dyl_A          285 SFIKR  289 (318)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99975


No 184
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-43  Score=286.72  Aligned_cols=224  Identities=24%  Similarity=0.427  Sum_probs=186.1

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH------   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------   74 (247)
                      |..||||++....    .....+.+.+|+.+++++ +||||+++++++...+..++||||+++++|.+++....      
T Consensus        75 ~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~  150 (344)
T 1rjb_A           75 SIQVAVKMLKEKA----DSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSED  150 (344)
T ss_dssp             EEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---
T ss_pred             ceEEEEEeccccc----CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhcccccccc
Confidence            4579999997432    233456788999999999 89999999999999999999999999999999997642      


Q ss_pred             ------------------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---
Q 041080           75 ------------------LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---  133 (247)
Q Consensus        75 ------------------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---  133 (247)
                                        +++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........   
T Consensus       151 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~  230 (344)
T 1rjb_A          151 EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV  230 (344)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEE
T ss_pred             ccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcccee
Confidence                              68899999999999999999999999999999999999999999999999875543321   


Q ss_pred             -ccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHH-hhcCCCCCCCCcCCHHHHHHH
Q 041080          134 -KSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFR-IGKGELPSVPSSLSRDARDFI  210 (247)
Q Consensus       134 -~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li  210 (247)
                       ....+++.|+|||.+.+..  ++.++||||||+++|+|++ |..||........... +........+...++++.+++
T Consensus       231 ~~~~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  308 (344)
T 1rjb_A          231 RGNARLPVKWMAPESLFEGI--YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIM  308 (344)
T ss_dssp             ETTEEECGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ccCccCccCccCHHHhccCC--CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence             2233567899999986544  7899999999999999998 9999987665444333 334444556778899999999


Q ss_pred             HHHhcCCCCCCCChhhhhcCc
Q 041080          211 LKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       211 ~~~l~~~p~~Rps~~~il~~p  231 (247)
                      .+||..+|.+|||+++++++-
T Consensus       309 ~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          309 QSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHcCCCchhCcCHHHHHHHH
Confidence            999999999999999998764


No 185
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=3.2e-43  Score=285.66  Aligned_cols=229  Identities=26%  Similarity=0.358  Sum_probs=182.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCc-------EEEEEeccccCcHHHHHH--
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENR-------LYIFLELVTKGSLANLYQ--   71 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~lv~e~~~~~~L~~~l~--   71 (247)
                      +|+.||||++......      .....+++..+..++||||+++++++...+.       .++||||+++ +|...+.  
T Consensus        47 ~~~~vavK~~~~~~~~------~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~  119 (360)
T 3e3p_A           47 TGMSVAIKKVIQDPRF------RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNY  119 (360)
T ss_dssp             TCCEEEEEEEECCTTC------CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHH
T ss_pred             CCCEEEEEEEecCccc------cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHH
Confidence            4789999998654321      1235578888889999999999999865333       8899999987 5544433  


Q ss_pred             ---hcCCCHHHHHHHHHHHHHHHHHhh--hCCeeecCCCCCcEEEcC-CCCeEEcccccccccCccc-cccCCCCCCccC
Q 041080           72 ---KYHLSDSQVSSYTRQILNGLVYLH--ERNVVHRDIKCANILVDA-SGSVKLADFGLAKATTMND-LKSCKGTPFWMA  144 (247)
Q Consensus        72 ---~~~~~~~~~~~~~~~l~~~l~~lh--~~~i~h~dl~~~ni~~~~-~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~a  144 (247)
                         ...+++..++.++.|++.||.+||  +.|++|+||||+||+++. ++.++|+|||.+....... .....+++.|+|
T Consensus       120 ~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~a  199 (360)
T 3e3p_A          120 YRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA  199 (360)
T ss_dssp             HTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCC
T ss_pred             hhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeC
Confidence               234889999999999999999999  999999999999999996 8999999999987654333 334568899999


Q ss_pred             CcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCC------------------------------
Q 041080          145 PEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGE------------------------------  194 (247)
Q Consensus       145 PE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~------------------------------  194 (247)
                      ||.+.+.. .++.++||||||+++|+|++|..||...........+....                              
T Consensus       200 PE~~~~~~-~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (360)
T 3e3p_A          200 PELIFGNQ-HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSN  278 (360)
T ss_dssp             HHHHTTCS-SCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHH
T ss_pred             HHHHcCCC-CCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCccc
Confidence            99985433 26899999999999999999999998877665554432210                              


Q ss_pred             -CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCC
Q 041080          195 -LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPL  237 (247)
Q Consensus       195 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~  237 (247)
                       .+......++++.++|.+||+.||.+|||++++++||||+...
T Consensus       279 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          279 VFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             ccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence             1112233578999999999999999999999999999999753


No 186
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.8e-43  Score=283.68  Aligned_cols=230  Identities=30%  Similarity=0.529  Sum_probs=167.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHH-HHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHH------hc
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEIS-LLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQ------KY   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~------~~   73 (247)
                      +|+.||||++....    .......+..|+. +++.++||||+++++++...+..++||||+.+ +|.+++.      ..
T Consensus        46 ~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~  120 (327)
T 3aln_A           46 SGQIMAVKRIRSTV----DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDD  120 (327)
T ss_dssp             TTEEEEEEEEECCC----CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCC
T ss_pred             CCCEEEEEEeeccc----CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcc
Confidence            47899999997542    2233444555555 67778999999999999999999999999986 8888776      34


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCcEEEcCCCCeEEcccccccccCcccc-ccCCCCCCccCCccccc-
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHER-NVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL-KSCKGTPFWMAPEVVNS-  150 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~aPE~~~~-  150 (247)
                      .+++..+..++.|++.||.+||+. |++|+||||+||+++.++.++|+|||.+........ ....++..|+|||.+.. 
T Consensus       121 ~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  200 (327)
T 3aln_A          121 VIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS  200 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------------------------
T ss_pred             cCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccc
Confidence            589999999999999999999998 999999999999999999999999999875543322 23358899999999842 


Q ss_pred             -CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh-HHHHHhhcCCCCCCC----CcCCHHHHHHHHHHhcCCCCCCCCh
Q 041080          151 -KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV-QALFRIGKGELPSVP----SSLSRDARDFILKCLQVNPNDRPTV  224 (247)
Q Consensus       151 -~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~  224 (247)
                       ....++.++|+||||+++|+|++|..||...... .....+..+..+.++    ..+++.+.+++.+||..+|.+|||+
T Consensus       201 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  280 (327)
T 3aln_A          201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY  280 (327)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             cCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCH
Confidence             1223788999999999999999999999764432 222222222222222    4689999999999999999999999


Q ss_pred             hhhhcCccCCC
Q 041080          225 TELMEHPFVKR  235 (247)
Q Consensus       225 ~~il~~p~~~~  235 (247)
                      +++++||||..
T Consensus       281 ~ell~hp~~~~  291 (327)
T 3aln_A          281 KELLKHPFILM  291 (327)
T ss_dssp             HHHTTSHHHHH
T ss_pred             HHHHhChHHHH
Confidence            99999999975


No 187
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.2e-42  Score=276.48  Aligned_cols=228  Identities=25%  Similarity=0.470  Sum_probs=183.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      ...+|+|+++...   ......+.+.+|+.++++++||||+++++++. .+..++||||+.+++|.+++...  .+++..
T Consensus        58 ~~~~avk~~k~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  133 (307)
T 3lb7_A           58 HGDVAVKILKVVD---PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ  133 (307)
T ss_dssp             SSEEEEEECCCSS---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHH
T ss_pred             CCEEEEEEEecCC---CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCcHHHHHHhcccCCCHHH
Confidence            3468899886543   34555678999999999999999999999865 45689999999999999998643  589999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc----cccccCCCCCCccCCcccccC-CCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM----NDLKSCKGTPFWMAPEVVNSK-NDG  154 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~-~~~  154 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||++.....    .......|++.|+|||.+... ...
T Consensus       134 ~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  213 (307)
T 3lb7_A          134 LIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP  213 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------------CCCCTTSCCHHHHHCCSSCC
T ss_pred             HHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccCCCCCcceECcceeeccCCCC
Confidence            999999999999999999999999999999999999999999999864332    223345689999999998522 334


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhh-cC----CCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIG-KG----ELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++||||||+++|+|++|..||......+...... ..    ........+++.+.+++.+||+.+|.+|||+.++++
T Consensus       214 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~  293 (307)
T 3lb7_A          214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHH
Confidence            7889999999999999999999998766555443322 11    122344678999999999999999999999999998


Q ss_pred             CccC
Q 041080          230 HPFV  233 (247)
Q Consensus       230 ~p~~  233 (247)
                      +.+.
T Consensus       294 ~l~~  297 (307)
T 3lb7_A          294 SIEL  297 (307)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643


No 188
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.3e-43  Score=282.90  Aligned_cols=218  Identities=26%  Similarity=0.451  Sum_probs=181.6

Q ss_pred             EEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHHHHH
Q 041080            5 FAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQVSS   82 (247)
Q Consensus         5 ~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~   82 (247)
                      |++|.+...    ......+.+.+|+.++++++||||+++++++..+. .+++++++.+++|.+++...  .+++..++.
T Consensus        47 v~iK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~  121 (327)
T 3lzb_A           47 VAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLN  121 (327)
T ss_dssp             EEEEEECCC----SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHH
T ss_pred             EEEEeeccc----cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHH
Confidence            355555432    23334567889999999999999999999988764 88999999999999998764  489999999


Q ss_pred             HHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccCCCCCCcc
Q 041080           83 YTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        83 ~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......    .....++..|+|||.+.+..  ++.+
T Consensus       122 i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~  199 (327)
T 3lzb_A          122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI--YTHQ  199 (327)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCC--CCHH
T ss_pred             HHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCC--CChH
Confidence            99999999999999999999999999999999999999999987543322    22233566899999997654  7899


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          159 ADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       159 ~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +||||||+++|+|++ |..||...........+........+..++.++.+++.+||..+|.+|||++++++
T Consensus       200 ~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999 99999998888888777777777778889999999999999999999999999986


No 189
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2e-43  Score=294.98  Aligned_cols=219  Identities=27%  Similarity=0.509  Sum_probs=190.2

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc---CCCHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY---HLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~   78 (247)
                      +..||||++....      ...+.+.+|+.++++++||||+++++++. .+..++||||+++|+|.+++...   .++..
T Consensus       212 ~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~  284 (454)
T 1qcf_A          212 HTKVAVKTMKPGS------MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP  284 (454)
T ss_dssp             TEEEEEEEECTTS------BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHH
T ss_pred             ccEEEEEEecCCC------ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHH
Confidence            5789999997532      23567889999999999999999999886 56789999999999999999743   58999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......   .....++..|+|||.+....  +
T Consensus       285 ~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  362 (454)
T 1qcf_A          285 KLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--F  362 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCC--C
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCC--C
Confidence            999999999999999999999999999999999999999999999997654332   22333566899999996544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++||||||+++|+|++ |..||......+....+..+.....+..+|+++.++|.+||..+|.+|||++++++
T Consensus       363 ~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          363 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            899999999999999999 99999988888887777776666677889999999999999999999999999975


No 190
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4.7e-43  Score=273.79  Aligned_cols=223  Identities=19%  Similarity=0.406  Sum_probs=189.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC--CcEEEEEeccccCcHHHHHHhcC---C
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE--NRLYIFLELVTKGSLANLYQKYH---L   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~---~   75 (247)
                      +|+.||||++....   ......+.+.+|+.++++++||||+++++++.+.  +..++||||+++++|.+++....   +
T Consensus        32 ~~~~~avK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  108 (271)
T 3kmu_A           32 QGNDIVVKVLKVRD---WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVV  108 (271)
T ss_dssp             TTEEEEEEEECCTT---CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCC
T ss_pred             CCeeEEEEEecccc---cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCC
Confidence            37889999997653   3345567799999999999999999999999877  78899999999999999998754   8


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERN--VVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      ++..++.++.|++.||.+||+.|  ++|+||||+||+++.++.++++|||.+....   .....+++.|+|||.+.+...
T Consensus       109 ~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~  185 (271)
T 3kmu_A          109 DQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---SPGRMYAPAWVAPEALQKKPE  185 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS---CTTCBSCGGGSCHHHHHSCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec---ccCccCCccccChhhhccCCC
Confidence            99999999999999999999999  9999999999999999999999888764422   233457899999999865432


Q ss_pred             -CCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhh-cCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          154 -GYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIG-KGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       154 -~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                       .++.++||||||+++|++++|..||............. ....+..+..+++++.+++.+||+.+|.+|||++++++
T Consensus       186 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          186 DTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             23447999999999999999999998877766655544 34456677889999999999999999999999999985


No 191
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.6e-43  Score=280.04  Aligned_cols=223  Identities=25%  Similarity=0.434  Sum_probs=188.0

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC------
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH------   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------   74 (247)
                      |+.||||++...    ......+.+.+|+.+++++ +||||+++++++..++..++||||+++++|.+++....      
T Consensus        53 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  128 (313)
T 1t46_A           53 AMTVAVKMLKPS----AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS  128 (313)
T ss_dssp             EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC---
T ss_pred             hhhhHHHhcCcc----hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc
Confidence            578999999643    2334567789999999999 89999999999999999999999999999999997643      


Q ss_pred             -------------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc----ccCC
Q 041080           75 -------------LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL----KSCK  137 (247)
Q Consensus        75 -------------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~----~~~~  137 (247)
                                   +++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+........    ....
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  208 (313)
T 1t46_A          129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR  208 (313)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSE
T ss_pred             cccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCC
Confidence                         89999999999999999999999999999999999999999999999999876544332    1233


Q ss_pred             CCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHH-hhcCCCCCCCCcCCHHHHHHHHHHhc
Q 041080          138 GTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFR-IGKGELPSVPSSLSRDARDFILKCLQ  215 (247)
Q Consensus       138 ~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~  215 (247)
                      ++..|+|||.+.+..  ++.++|+||||+++++|++ |..||........... +........+..+++++.+++.+||.
T Consensus       209 ~~~~y~aPE~~~~~~--~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  286 (313)
T 1t46_A          209 LPVKWMAPESIFNCV--YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD  286 (313)
T ss_dssp             ECGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             CcceeeChHHhcCCC--CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcC
Confidence            567899999986544  7899999999999999998 9999977664443333 33333445567889999999999999


Q ss_pred             CCCCCCCChhhhhcC
Q 041080          216 VNPNDRPTVTELMEH  230 (247)
Q Consensus       216 ~~p~~Rps~~~il~~  230 (247)
                      .+|.+|||+++++++
T Consensus       287 ~dp~~Rps~~ell~~  301 (313)
T 1t46_A          287 ADPLKRPTFKQIVQL  301 (313)
T ss_dssp             SSGGGSCCHHHHHHH
T ss_pred             CCchhCcCHHHHHHH
Confidence            999999999999864


No 192
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=4.2e-43  Score=279.82  Aligned_cols=224  Identities=24%  Similarity=0.422  Sum_probs=184.8

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC-----cEEEEEeccccCcHHHHHHh----
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN-----RLYIFLELVTKGSLANLYQK----   72 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~----   72 (247)
                      |..||+|++....   ......+.+.+|+.++++++||||+++++++...+     ..++||||+.+++|.+++..    
T Consensus        62 ~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~  138 (313)
T 3brb_A           62 SLKVAVKTMKLDN---SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLE  138 (313)
T ss_dssp             EEEEEEEEC---C---CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBT
T ss_pred             eeEEEEEEEeccc---cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhh
Confidence            3479999987543   33455677899999999999999999999987654     45999999999999999843    


Q ss_pred             ---cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCC
Q 041080           73 ---YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAP  145 (247)
Q Consensus        73 ---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aP  145 (247)
                         ..+++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......    .....+++.|+||
T Consensus       139 ~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  218 (313)
T 3brb_A          139 TGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI  218 (313)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCH
T ss_pred             cCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCc
Confidence               248999999999999999999999999999999999999999999999999986544322    1223366789999


Q ss_pred             cccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCCh
Q 041080          146 EVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTV  224 (247)
Q Consensus       146 E~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  224 (247)
                      |.+.+..  ++.++|+||||+++|+|++ |..||...........+........+..+++++.+++.+||..+|.+|||+
T Consensus       219 E~~~~~~--~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  296 (313)
T 3brb_A          219 ESLADRV--YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF  296 (313)
T ss_dssp             HHHHSSC--CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCH
T ss_pred             hhhcCCC--ccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCH
Confidence            9996544  7899999999999999999 889998888888877777777777788899999999999999999999999


Q ss_pred             hhhhcC
Q 041080          225 TELMEH  230 (247)
Q Consensus       225 ~~il~~  230 (247)
                      ++++++
T Consensus       297 ~~l~~~  302 (313)
T 3brb_A          297 SVLRLQ  302 (313)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864


No 193
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=3.5e-43  Score=291.83  Aligned_cols=226  Identities=29%  Similarity=0.457  Sum_probs=174.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCC----
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHL----   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----   75 (247)
                      +|+.||||++...        ..+.+.+|+.+++++ +||||+++++++.+++..++||||+++ +|.++++....    
T Consensus        38 ~g~~vAvK~~~~~--------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~g-sL~~~l~~~~~~~~~  108 (434)
T 2rio_A           38 QGRPVAVKRMLID--------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDEN  108 (434)
T ss_dssp             SSSEEEEEEEEGG--------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHTC------
T ss_pred             CCeEEEEEEEcHH--------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCC-CHHHHHhccCCCchh
Confidence            5889999998642        123567899999987 899999999999999999999999965 99999976542    


Q ss_pred             ----CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCC-------------CCeEEcccccccccCccc------
Q 041080           76 ----SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDAS-------------GSVKLADFGLAKATTMND------  132 (247)
Q Consensus        76 ----~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~-------------~~~~l~df~~~~~~~~~~------  132 (247)
                          ++..++.++.|++.||.|||++||+|+||||+||+++.+             +.++|+|||.+.......      
T Consensus       109 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~  188 (434)
T 2rio_A          109 LKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN  188 (434)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------
T ss_pred             hhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceee
Confidence                223457799999999999999999999999999999754             479999999987554332      


Q ss_pred             cccCCCCCCccCCcccccC-----CCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCC----CCcC
Q 041080          133 LKSCKGTPFWMAPEVVNSK-----NDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSV----PSSL  202 (247)
Q Consensus       133 ~~~~~~~~~~~aPE~~~~~-----~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~  202 (247)
                      .....|++.|+|||.+.+.     ...++.++||||||+++|+|++ |..||.................+..    +..+
T Consensus       189 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~  268 (434)
T 2rio_A          189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSL  268 (434)
T ss_dssp             ------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHH
T ss_pred             ecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccc
Confidence            2234689999999998652     2347899999999999999998 9999976543332111111111111    1245


Q ss_pred             CHHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          203 SRDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       203 ~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                      ++++.+++.+||+.+|.+|||+.++++||||..
T Consensus       269 ~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          269 IAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             hHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            688999999999999999999999999999974


No 194
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=8.2e-44  Score=292.51  Aligned_cols=225  Identities=28%  Similarity=0.394  Sum_probs=178.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC--------CCceeeeceeee----cCCcEEEEEeccccCcHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE--------QDNIVQYLGTDK----DENRLYIFLELVTKGSLAN   68 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~   68 (247)
                      +|+.||||++..      .....+.+.+|+.+++.++        |+||+++++++.    .....++||||+.+ +|.+
T Consensus        61 ~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~  133 (397)
T 1wak_A           61 GKKFVAMKVVKS------AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH-HLLK  133 (397)
T ss_dssp             TTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCC-BHHH
T ss_pred             CCeEEEEEEEec------CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCc-cHHH
Confidence            478999999953      2345667889999999995        788999999987    55689999999955 5655


Q ss_pred             HHHhc---CCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCcEEEcCCC-----------------------------
Q 041080           69 LYQKY---HLSDSQVSSYTRQILNGLVYLHER-NVVHRDIKCANILVDASG-----------------------------  115 (247)
Q Consensus        69 ~l~~~---~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~~~ni~~~~~~-----------------------------  115 (247)
                      .+.+.   .+++..++.++.|++.||.|||++ ||+|+||||+||+++.++                             
T Consensus       134 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (397)
T 1wak_A          134 WIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA  213 (397)
T ss_dssp             HHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC------------------
T ss_pred             HHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccC
Confidence            55433   499999999999999999999998 999999999999998775                             


Q ss_pred             --------------------CeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCC
Q 041080          116 --------------------SVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRR  175 (247)
Q Consensus       116 --------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~  175 (247)
                                          .++|+|||.+...... .....++..|+|||.+.+..  ++.++||||||+++|+|++|.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~elltg~  290 (397)
T 1wak_A          214 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-FTEDIQTRQYRSLEVLIGSG--YNTPADIWSTACMAFELATGD  290 (397)
T ss_dssp             ---CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-SCSCCSCGGGCCHHHHHTSC--CCTHHHHHHHHHHHHHHHHSS
T ss_pred             CcccccccccccccccccccceEecccccccccccc-CccCCCCCcccCChhhcCCC--CCcHHHHHHHHHHHHHHhhCC
Confidence                                7999999998765433 34456899999999997654  789999999999999999999


Q ss_pred             CCCCCChhh------HHHHHhhc--CCC---------------------------------------CCCCCcCCHHHHH
Q 041080          176 PPYSHLEGV------QALFRIGK--GEL---------------------------------------PSVPSSLSRDARD  208 (247)
Q Consensus       176 ~p~~~~~~~------~~~~~~~~--~~~---------------------------------------~~~~~~~~~~~~~  208 (247)
                      .||......      .....+..  +..                                       ...+...++.+.+
T Consensus       291 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (397)
T 1wak_A          291 YLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTD  370 (397)
T ss_dssp             CSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHH
T ss_pred             CCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHH
Confidence            999754321      11111100  000                                       0112334567899


Q ss_pred             HHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          209 FILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       209 li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                      ||.+||+.||.+|||++++++||||+.
T Consensus       371 li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          371 FLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             HHHHHhccChhhcCCHHHHhhCccccC
Confidence            999999999999999999999999974


No 195
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=2.9e-43  Score=296.71  Aligned_cols=220  Identities=26%  Similarity=0.462  Sum_probs=192.1

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc---CCCHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY---HLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~   78 (247)
                      |..||||.+....      ...+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++...   .+++.
T Consensus       245 ~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~  318 (495)
T 1opk_A          245 SLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV  318 (495)
T ss_dssp             TEEEEEEECCSSS------SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHH
T ss_pred             CeEEEEEEecCcc------cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHH
Confidence            6789999986432      12457889999999999999999999999999999999999999999999763   48899


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---ccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---KSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++........   ....++..|+|||.+....  +
T Consensus       319 ~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  396 (495)
T 1opk_A          319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK--F  396 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCE--E
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCC--C
Confidence            9999999999999999999999999999999999999999999999876543322   2233456899999986544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++||||||+++|+|++ |..||...........+........+..+++++.++|.+||+.+|.+|||++++++
T Consensus       397 ~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          397 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            899999999999999999 99999988877777777776666778889999999999999999999999999976


No 196
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=4.2e-43  Score=275.33  Aligned_cols=219  Identities=28%  Similarity=0.485  Sum_probs=183.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC-CcEEEEEeccccCcHHHHHHhcC---CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE-NRLYIFLELVTKGSLANLYQKYH---LS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~---~~   76 (247)
                      +|+.||||++....       ..+.+.+|+.++++++||||+++++++... +..++||||+++++|.+++...+   ++
T Consensus        43 ~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  115 (278)
T 1byg_A           43 RGNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLG  115 (278)
T ss_dssp             TTEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCC
T ss_pred             cCCEEEEEEecchh-------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCC
Confidence            37889999986432       345688999999999999999999986544 57899999999999999987643   89


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      +..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+....... ....++..|+|||.+.+..  ++
T Consensus       116 ~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~y~aPE~~~~~~--~~  192 (278)
T 1byg_A          116 GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWTAPEALREKK--FS  192 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------CCTTTSCHHHHHHCC--CC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc-cCCCccccccCHHHhCCCC--CC
Confidence            99999999999999999999999999999999999999999999999986544332 2334678899999986544  78


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          157 LTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      .++|+||||++++++++ |..||...........+........+..+++.+.+++.+||..+|.+|||+.++++
T Consensus       193 ~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          193 TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            99999999999999998 99999988877777777776666777889999999999999999999999999975


No 197
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=6.5e-44  Score=285.99  Aligned_cols=219  Identities=28%  Similarity=0.467  Sum_probs=184.5

Q ss_pred             EEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHHHHH
Q 041080            5 FAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQVSS   82 (247)
Q Consensus         5 ~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~   82 (247)
                      ||+|.+....    .......+.+|+.++++++||||+++++++. ++..++||||+.+++|.+++...  .+++..++.
T Consensus        45 v~~K~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~  119 (325)
T 3kex_A           45 VCIKVIEDKS----GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN  119 (325)
T ss_dssp             EEEEEECCTT----SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHH
T ss_pred             EEEEeccccc----cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHH
Confidence            6666664322    1222334678999999999999999999886 55789999999999999998764  589999999


Q ss_pred             HHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccCCCCCCcc
Q 041080           83 YTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSKNDGYGLT  158 (247)
Q Consensus        83 ~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~  158 (247)
                      ++.|++.||.|||+.|++|+||||+||+++.++.++|+|||.+.......    .....++..|+|||.+.+..  ++.+
T Consensus       120 ~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~  197 (325)
T 3kex_A          120 WGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK--YTHQ  197 (325)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCC--CCHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCC--CChh
Confidence            99999999999999999999999999999999999999999997654332    22344677899999996554  7899


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          159 ADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       159 ~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                      +|+||||+++|++++ |..||...........+........+..++.++.+++.+||..+|.+|||+.+++++
T Consensus       198 ~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          198 SDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             hHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999 999999888777777777776667778889999999999999999999999999874


No 198
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-42  Score=274.47  Aligned_cols=220  Identities=25%  Similarity=0.433  Sum_probs=188.0

Q ss_pred             eEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcE-EEEEeccccCcHHHHHHh--cCCCHHHH
Q 041080            4 FFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRL-YIFLELVTKGSLANLYQK--YHLSDSQV   80 (247)
Q Consensus         4 ~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~e~~~~~~L~~~l~~--~~~~~~~~   80 (247)
                      .+|+|.+..    .......+.+.+|+.++++++||||+++++++.+.+.. +++|||+.+++|.+++..  ..+++..+
T Consensus        51 ~~aiK~~~~----~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~  126 (298)
T 3pls_A           51 QCAIKSLSR----ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL  126 (298)
T ss_dssp             EEEEEEETT----CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHH
T ss_pred             eeeeeeccc----cccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHH
Confidence            689998864    23445677889999999999999999999999776655 999999999999999976  35889999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc------cccCCCCCCccCCcccccCCCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND------LKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......      .....++..|+|||.+.+..  
T Consensus       127 ~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  204 (298)
T 3pls_A          127 ISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR--  204 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCC--
T ss_pred             HHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCC--
Confidence            9999999999999999999999999999999999999999999986543322      22344677899999996544  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++|+||||+++|+|++ +.+||...........+........+..+++.+.+++.+||..+|.+|||++++++
T Consensus       205 ~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          205 FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            7899999999999999999 55667777777777777776666777889999999999999999999999999876


No 199
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=8.4e-43  Score=273.73  Aligned_cols=219  Identities=28%  Similarity=0.487  Sum_probs=188.5

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc---CCCHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY---HLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~   78 (247)
                      ++.||||.+.....      ..+.+.+|+.++++++||||+++++++.. +..++||||+++++|.+++...   .+++.
T Consensus        37 ~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~  109 (279)
T 1qpc_A           37 HTKVAVKSLKQGSM------SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTIN  109 (279)
T ss_dssp             TEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHH
T ss_pred             CcEEEEEEecCCcc------cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHH
Confidence            56899999864321      24568899999999999999999998764 5689999999999999998653   59999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---ccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---KSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+........   ....++..|+|||.+.+..  +
T Consensus       110 ~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  187 (279)
T 1qpc_A          110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--F  187 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCE--E
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCC--C
Confidence            9999999999999999999999999999999999999999999999876543322   2333567899999986544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++|+||||+++++|++ |..||...........+........+..+++++.+++.+||..+|.+|||++++++
T Consensus       188 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            889999999999999999 99999888877777777766666677889999999999999999999999999976


No 200
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=4.5e-43  Score=278.24  Aligned_cols=223  Identities=30%  Similarity=0.528  Sum_probs=182.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecC--CcEEEEEeccccCcHHHHHHhc--CCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDE--NRLYIFLELVTKGSLANLYQKY--HLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~--~~~   76 (247)
                      +|+.||||++....    .....+.+.+|+.++++++||||+++++++...  ...++||||+++++|.+++...  .++
T Consensus        49 ~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  124 (302)
T 4e5w_A           49 TGEQVAVKSLKPES----GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKIN  124 (302)
T ss_dssp             CSEEEEEEEEC---------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCC
T ss_pred             cCeEEEEEEecccc----cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCC
Confidence            47899999997543    223456788999999999999999999998876  6789999999999999999553  499


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~  151 (247)
                      +..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+.
T Consensus       125 ~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  204 (302)
T 4e5w_A          125 LKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQS  204 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCC
Confidence            99999999999999999999999999999999999999999999999986554332     2234467779999998655


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCC---------------hhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcC
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHL---------------EGVQALFRIGKGELPSVPSSLSRDARDFILKCLQV  216 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  216 (247)
                      .  ++.++|+||||+++++|++|..|+...               .................+..+++++.+++.+||+.
T Consensus       205 ~--~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  282 (302)
T 4e5w_A          205 K--FYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF  282 (302)
T ss_dssp             E--EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCS
T ss_pred             C--CCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCC
Confidence            4  788999999999999999998875322               12222334444555566788999999999999999


Q ss_pred             CCCCCCChhhhhc
Q 041080          217 NPNDRPTVTELME  229 (247)
Q Consensus       217 ~p~~Rps~~~il~  229 (247)
                      +|.+|||++++++
T Consensus       283 dp~~Rps~~~ll~  295 (302)
T 4e5w_A          283 QPSNRTSFQNLIE  295 (302)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHH
Confidence            9999999999985


No 201
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=6.4e-43  Score=301.87  Aligned_cols=222  Identities=26%  Similarity=0.441  Sum_probs=190.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQV   80 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~   80 (247)
                      |+.||||++....   ......+.+.+|+.++++++||||+++++++.. +..++||||+++++|.+++... .+++..+
T Consensus       396 ~~~vAvK~~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~  471 (635)
T 4fl3_A          396 VKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI  471 (635)
T ss_dssp             EEEEEEEEECGGG---GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHH
T ss_pred             ceEEEEEEecccc---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHH
Confidence            5689999997542   233446778999999999999999999999865 4688999999999999999765 4999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccCCCCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      +.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......     .....++..|+|||.+.+..  +
T Consensus       472 ~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~--~  549 (635)
T 4fl3_A          472 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK--F  549 (635)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCC--C
T ss_pred             HHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCC--C
Confidence            9999999999999999999999999999999999999999999986544322     12223567799999996544  8


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +.++||||||+++|+|++ |..||......+....+..+.....+..+++++.++|.+||..+|.+|||++++++
T Consensus       550 ~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          550 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            999999999999999998 99999999888888888888777888899999999999999999999999999975


No 202
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=6.9e-43  Score=285.85  Aligned_cols=226  Identities=27%  Similarity=0.417  Sum_probs=181.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CC-----ceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QD-----NIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-   73 (247)
                      +|+.||||++..      .......+..|+.+++.++ |+     +|+++++++...+..++||||+.+ +|.+++... 
T Consensus        78 ~~~~vaiK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~  150 (382)
T 2vx3_A           78 EQEWVAIKIIKN------KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTN  150 (382)
T ss_dssp             TTEEEEEEEECS------SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTT
T ss_pred             CCcEEEEEEEec------cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcC
Confidence            478899999963      2334566778888888885 55     499999999999999999999975 999988764 


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHhh--hCCeeecCCCCCcEEEc--CCCCeEEcccccccccCccccccCCCCCCccCCcc
Q 041080           74 --HLSDSQVSSYTRQILNGLVYLH--ERNVVHRDIKCANILVD--ASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEV  147 (247)
Q Consensus        74 --~~~~~~~~~~~~~l~~~l~~lh--~~~i~h~dl~~~ni~~~--~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~  147 (247)
                        ++++..++.++.|++.||.+||  +.||+|+||||+||+++  .++.++|+|||.+...... .....+++.|+|||.
T Consensus       151 ~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~-~~~~~~t~~y~aPE~  229 (382)
T 2vx3_A          151 FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-IYQYIQSRFYRSPEV  229 (382)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC-CCSSCSCGGGCCHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc-cccccCCccccChHH
Confidence              4899999999999999999999  57999999999999995  4678999999998765432 345568999999999


Q ss_pred             cccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC--------------------CC----------
Q 041080          148 VNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL--------------------PS----------  197 (247)
Q Consensus       148 ~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~----------  197 (247)
                      +.+..  ++.++||||||+++|+|++|..||......+....+.....                    +.          
T Consensus       230 ~~~~~--~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (382)
T 2vx3_A          230 LLGMP--YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKD  307 (382)
T ss_dssp             HTTCC--CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCT
T ss_pred             HcCCC--CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccc
Confidence            97654  78999999999999999999999988766555443321100                    00          


Q ss_pred             -----CCC----------------------------cCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          198 -----VPS----------------------------SLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       198 -----~~~----------------------------~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                           .+.                            ..++++++||.+||+.||.+|||++|+|+||||+..
T Consensus       308 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          308 GKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             cccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence                 000                            001478999999999999999999999999999875


No 203
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=7.1e-43  Score=289.44  Aligned_cols=226  Identities=29%  Similarity=0.460  Sum_probs=177.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC--CCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH--LSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~   77 (247)
                      +|+.||||++......        .+.+|+.+++++ +||||+++++++.+.+..++||||+.+ +|.+++....  ..+
T Consensus        47 ~~~~vAvK~~~~~~~~--------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~  117 (432)
T 3p23_A           47 DNRDVAVKRILPECFS--------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLG  117 (432)
T ss_dssp             SSSEEEEEEECTTTEE--------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCS
T ss_pred             CCeEEEEEEECHHHHH--------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccc
Confidence            5889999999653221        245899999999 799999999999999999999999975 9999997654  555


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC---CC--CeEEcccccccccCcc-----ccccCCCCCCccCCcc
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA---SG--SVKLADFGLAKATTMN-----DLKSCKGTPFWMAPEV  147 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~---~~--~~~l~df~~~~~~~~~-----~~~~~~~~~~~~aPE~  147 (247)
                      ..++.++.|++.||.|||++||+|+||||+||+++.   ++  .++|+|||++......     ......|++.|+|||.
T Consensus       118 ~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~  197 (432)
T 3p23_A          118 LEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM  197 (432)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhh
Confidence            567899999999999999999999999999999953   23  5789999998655432     2234568999999999


Q ss_pred             cccC-CCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCC--CCCcCCHHHHHHHHHHhcCCCCCCCC
Q 041080          148 VNSK-NDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPS--VPSSLSRDARDFILKCLQVNPNDRPT  223 (247)
Q Consensus       148 ~~~~-~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps  223 (247)
                      +.+. ...++.++||||||+++|++++ |..||...................  .....+..++++|.+||+.||.+|||
T Consensus       198 l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  277 (432)
T 3p23_A          198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS  277 (432)
T ss_dssp             TSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred             hhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCC
Confidence            8642 2336789999999999999999 899986655444333333222222  12345667899999999999999999


Q ss_pred             hhhhhcCccCCC
Q 041080          224 VTELMEHPFVKR  235 (247)
Q Consensus       224 ~~~il~~p~~~~  235 (247)
                      ++++++||||..
T Consensus       278 ~~evl~hp~f~~  289 (432)
T 3p23_A          278 AKHVLKHPFFWS  289 (432)
T ss_dssp             HHHHHTSTTTCC
T ss_pred             HHHHHhCccccC
Confidence            999999999975


No 204
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.4e-42  Score=274.86  Aligned_cols=220  Identities=25%  Similarity=0.444  Sum_probs=187.5

Q ss_pred             eEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceee-ecCCcEEEEEeccccCcHHHHHHhc--CCCHHHH
Q 041080            4 FFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTD-KDENRLYIFLELVTKGSLANLYQKY--HLSDSQV   80 (247)
Q Consensus         4 ~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~   80 (247)
                      .+|+|.+...    ......+.+.+|+.++++++||||+++++++ ..++..++||||+++++|.+++...  .+++..+
T Consensus        55 ~~avk~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~  130 (298)
T 3f66_A           55 HCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL  130 (298)
T ss_dssp             EEEEEEETTC----CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHH
T ss_pred             EEEEEecccC----CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHH
Confidence            5788888642    3445567789999999999999999999985 5567889999999999999999753  4889999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc------cccCCCCCCccCCcccccCCCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND------LKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......      .....+++.|+|||.+.+..  
T Consensus       131 ~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  208 (298)
T 3f66_A          131 IGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK--  208 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCC--
Confidence            9999999999999999999999999999999999999999999987554332      22333567899999996654  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++|+||||++++++++ +.+||......+....+........+..+++.+.+++.+||..+|.+|||++++++
T Consensus       209 ~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          209 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            7899999999999999999 67788877777777777777766777889999999999999999999999999986


No 205
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.9e-42  Score=275.57  Aligned_cols=225  Identities=27%  Similarity=0.349  Sum_probs=181.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-CCCHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-HLSDSQ   79 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~   79 (247)
                      +|+.||||++....  .......+.+.+|+.++++++||||+++++++...+..+++|||+++++|.++++.. .+++..
T Consensus        58 ~~~~vaiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  135 (309)
T 2h34_A           58 RERIVALKLMSETL--SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPR  135 (309)
T ss_dssp             TTEEEEEEECGGGG--GGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHH
T ss_pred             CCeEEEEEecCccc--ccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHH
Confidence            47889999986543  233455678899999999999999999999999999999999999999999998765 499999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......   .....++..|+|||.+.+..  ++
T Consensus       136 ~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  213 (309)
T 2h34_A          136 AVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESH--AT  213 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC------
T ss_pred             HHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCC--CC
Confidence            99999999999999999999999999999999999999999999986544332   22445888999999986543  78


Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCC--CCCCCcCCHHHHHHHHHHhcCCCCCCC-Chhhhhc
Q 041080          157 LTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGEL--PSVPSSLSRDARDFILKCLQVNPNDRP-TVTELME  229 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp-s~~~il~  229 (247)
                      .++|+||||+++|++++|..||...........+.....  ...+..+|+++.+++.+||+.+|.+|| |++++++
T Consensus       214 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          214 YRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             chHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            899999999999999999999988776544444333221  234567899999999999999999999 7887765


No 206
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1e-42  Score=281.88  Aligned_cols=224  Identities=23%  Similarity=0.320  Sum_probs=181.2

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCc------eeeeceeeecCCcEEEEEeccccCcHHHHHHhc---
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDN------IVQYLGTDKDENRLYIFLELVTKGSLANLYQKY---   73 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---   73 (247)
                      +.||||++..      .....+.+.+|+.+++.++|++      ++.+.+++...+..++||||+.+ ++.+.+...   
T Consensus        46 ~~vavK~~~~------~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~  118 (355)
T 2eu9_A           46 SQVALKIIRN------VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGK-NTFEFLKENNFQ  118 (355)
T ss_dssp             EEEEEEEECS------CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTC
T ss_pred             eEEEEEEEcc------cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEeccCC-ChHHHHHhccCC
Confidence            6899999953      2344567888999999997655      89999999999999999999955 666666544   


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE-------------------cCCCCeEEcccccccccCccccc
Q 041080           74 HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILV-------------------DASGSVKLADFGLAKATTMNDLK  134 (247)
Q Consensus        74 ~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~-------------------~~~~~~~l~df~~~~~~~~~~~~  134 (247)
                      .+++..++.++.|++.||.+||++|++|+||||+||++                   +.++.++|+|||.+...... ..
T Consensus       119 ~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-~~  197 (355)
T 2eu9_A          119 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-HT  197 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-CC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc-cc
Confidence            48999999999999999999999999999999999999                   56789999999998754332 33


Q ss_pred             cCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC--CCC----------------
Q 041080          135 SCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG--ELP----------------  196 (247)
Q Consensus       135 ~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------------  196 (247)
                      ...+++.|+|||.+.+..  ++.++|+||||+++|+|++|..||...........+...  ..+                
T Consensus       198 ~~~gt~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  275 (355)
T 2eu9_A          198 TIVATRHYRPPEVILELG--WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKG  275 (355)
T ss_dssp             SSCSCGGGCCHHHHTTCC--CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETT
T ss_pred             CCcCCCcccCCeeeecCC--CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhccc
Confidence            456899999999996544  789999999999999999999999877665543332211  000                


Q ss_pred             -------------------------CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          197 -------------------------SVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       197 -------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                                               ......+.++.++|.+||..||.+|||++++++||||+..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          276 GLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             EECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             ccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence                                     0111235688999999999999999999999999999964


No 207
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=9.8e-43  Score=299.92  Aligned_cols=221  Identities=25%  Similarity=0.449  Sum_probs=188.7

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      |..||||++....    .....+.+.+|+.++++++||||+++++++.. +..++||||+.+++|.+++...  .+++..
T Consensus       363 ~~~vAvK~~~~~~----~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~  437 (613)
T 2ozo_A          363 QIDVAIKVLKQGT----EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSN  437 (613)
T ss_dssp             EEEEEEEECCCCC----SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHH
T ss_pred             cEEEEEEEcCCCC----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHH
Confidence            4569999997542    22345678899999999999999999999876 5699999999999999998643  489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc-----ccCCCCCCccCCcccccCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL-----KSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      ++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++........     ....++..|+|||.+.+..  
T Consensus       438 ~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~--  515 (613)
T 2ozo_A          438 VAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--  515 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCC--
Confidence            999999999999999999999999999999999999999999999976543221     1222457899999996544  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++||||||+++|+|++ |..||......+....+..+.....+..+++++.++|.+||..+|.+||+++++++
T Consensus       516 ~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8999999999999999998 99999998888888888887777788899999999999999999999999999853


No 208
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=4.5e-43  Score=279.86  Aligned_cols=223  Identities=26%  Similarity=0.462  Sum_probs=186.6

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCC-cEEEEEeccccCcHHHHHHhcC-----
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDEN-RLYIFLELVTKGSLANLYQKYH-----   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~-----   74 (247)
                      |+.||||++...    ......+.+.+|+.++.++ +||||+++++++...+ ..++||||+++++|.+++....     
T Consensus        57 ~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~  132 (316)
T 2xir_A           57 CRTVAVKMLKEG----ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP  132 (316)
T ss_dssp             EEEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEEC
T ss_pred             ceEEEEEecccC----CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhccccccc
Confidence            578999999643    2344566788999999999 6999999999987654 5899999999999999997653     


Q ss_pred             ------------CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc----ccCCC
Q 041080           75 ------------LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL----KSCKG  138 (247)
Q Consensus        75 ------------~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~----~~~~~  138 (247)
                                  +++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........    ....+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  212 (316)
T 2xir_A          133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL  212 (316)
T ss_dssp             C-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEE
T ss_pred             ccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCc
Confidence                        78999999999999999999999999999999999999999999999999875443221    22336


Q ss_pred             CCCccCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhH-HHHHhhcCCCCCCCCcCCHHHHHHHHHHhcC
Q 041080          139 TPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQ-ALFRIGKGELPSVPSSLSRDARDFILKCLQV  216 (247)
Q Consensus       139 ~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  216 (247)
                      +..|+|||.+.+..  ++.++|+||||+++|+|++ |..||....... ....+........+..+++.+.+++.+||..
T Consensus       213 t~~y~aPE~~~~~~--~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  290 (316)
T 2xir_A          213 PLKWMAPETIFDRV--YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHG  290 (316)
T ss_dssp             CGGGCCHHHHHHCC--CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             ceeecCchhhcccc--ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCC
Confidence            77899999986544  7899999999999999998 999997765433 3344444445566778899999999999999


Q ss_pred             CCCCCCChhhhhcC
Q 041080          217 NPNDRPTVTELMEH  230 (247)
Q Consensus       217 ~p~~Rps~~~il~~  230 (247)
                      +|.+|||++++++|
T Consensus       291 dp~~Rps~~ell~~  304 (316)
T 2xir_A          291 EPSQRPTFSELVEH  304 (316)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999875


No 209
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=5.2e-42  Score=273.15  Aligned_cols=225  Identities=32%  Similarity=0.566  Sum_probs=179.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-----cCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-----YHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~~   75 (247)
                      +|+.||||++.....  ......+.+.+|+.++++++||||+++++++...+..++||||+++++|.++++.     ..+
T Consensus        56 ~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  133 (310)
T 2wqm_A           56 DGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI  133 (310)
T ss_dssp             TCCEEEEEEECTTSS--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCC
T ss_pred             CCceEEEEeeehhhc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCC
Confidence            588999999975432  3345667788999999999999999999999999999999999999999998864     348


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      ++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......  .....++..|+|||.+.+.. 
T Consensus       134 ~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-  212 (310)
T 2wqm_A          134 PERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-  212 (310)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCC-
T ss_pred             CHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCC-
Confidence            999999999999999999999999999999999999999999999999986544322  23345889999999986543 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChh--hHHHHHhhcCCCCCC-CCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEG--VQALFRIGKGELPSV-PSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                       ++.++|+||||+++++|++|..||.....  ......+.....+.. ...+++++.+++.+||..||.+|||++++++
T Consensus       213 -~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          213 -YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             78999999999999999999999865432  233344444444333 3678999999999999999999999999986


No 210
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=7.7e-43  Score=291.21  Aligned_cols=226  Identities=27%  Similarity=0.458  Sum_probs=189.6

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh---cCCCHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK---YHLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~   78 (247)
                      +..||||++.....      ..+.+.+|+.++++++||||+++++++.. +..++||||+++|+|.+++..   ..+++.
T Consensus       208 ~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~  280 (452)
T 1fmk_A          208 TTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP  280 (452)
T ss_dssp             TEEEEEEECCTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHH
T ss_pred             CceEEEEEeccCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHH
Confidence            45799999875321      23568899999999999999999999876 678999999999999999964   348999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---ccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---KSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........   ....++..|+|||.+.+..  +
T Consensus       281 ~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  358 (452)
T 1fmk_A          281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--F  358 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCC--C
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCC--C
Confidence            9999999999999999999999999999999999999999999999876543321   2233567899999986544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc--Ccc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME--HPF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~--~p~  232 (247)
                      +.++||||||+++|+|++ |..||......+....+..+.....+..+|+.+.++|.+||..+|.+|||++++++  ..+
T Consensus       359 ~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  438 (452)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred             CccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999999 99999988888888777777666778889999999999999999999999999987  356


Q ss_pred             CCCC
Q 041080          233 VKRP  236 (247)
Q Consensus       233 ~~~~  236 (247)
                      +...
T Consensus       439 ~~~~  442 (452)
T 1fmk_A          439 FTST  442 (452)
T ss_dssp             TSCS
T ss_pred             hccC
Confidence            6543


No 211
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=5.5e-43  Score=276.06  Aligned_cols=218  Identities=20%  Similarity=0.343  Sum_probs=181.1

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC--CCHHHH
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH--LSDSQV   80 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~   80 (247)
                      ..||+|++...     .....+.+.+|+.++++++||||+++++++.+++..++||||+++++|.+++...+  +++..+
T Consensus        41 ~~va~K~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  115 (289)
T 4fvq_A           41 TEVLLKVLDKA-----HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK  115 (289)
T ss_dssp             EEEEEEEECGG-----GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHH
T ss_pred             hhhhhhhcccc-----cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHH
Confidence            46999998642     23445678899999999999999999999999999999999999999999997754  999999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC--------eEEcccccccccCccccccCCCCCCccCCcccccCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS--------VKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~--------~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  152 (247)
                      +.++.|++.||.+||++|++|+||||+||+++.++.        ++|+|||.+.......  ...++..|+|||.+.+..
T Consensus       116 ~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~y~aPE~~~~~~  193 (289)
T 4fvq_A          116 LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--ILQERIPWVPPECIENPK  193 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH--HHHHTTTTSCHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCcc--ccCCcCcccCHHHhCCCC
Confidence            999999999999999999999999999999998887        9999999986543322  233677899999987522


Q ss_pred             CCCCcchhHHHHHHHHHHHHhC-CCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          153 DGYGLTADIWSLGCTVLEMLTR-RPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                       .++.++||||||+++|+|++| ..|+..............  ....+...++++.+++.+||+.+|.+|||+++++++
T Consensus       194 -~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          194 -NLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             -GCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             -CCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             278999999999999999995 555655554444333322  334566678899999999999999999999999874


No 212
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=1.3e-43  Score=283.77  Aligned_cols=224  Identities=26%  Similarity=0.379  Sum_probs=181.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc-----CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY-----HL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~~   75 (247)
                      +|+.||||++....     ....+.+.+|+.+++.++||||+++++++...+..++||||+++++|.+++...     .+
T Consensus        62 ~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  136 (321)
T 2qkw_B           62 DGAKVALKRRTPES-----SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM  136 (321)
T ss_dssp             TCCEEEEEECCSCC-----SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCC
T ss_pred             CCCEEEEEEecccC-----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCcccc
Confidence            47899999886532     234567889999999999999999999999999999999999999999988654     38


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~  151 (247)
                      ++..++.++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......    .....|++.|+|||.+.+.
T Consensus       137 ~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  216 (321)
T 2qkw_B          137 SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKG  216 (321)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCC
Confidence            899999999999999999999999999999999999999999999999986533221    2233478899999998655


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHH---H----HHhhcCC---------CCCCCCcCCHHHHHHHHHHhc
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQA---L----FRIGKGE---------LPSVPSSLSRDARDFILKCLQ  215 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~---~----~~~~~~~---------~~~~~~~~~~~~~~li~~~l~  215 (247)
                      .  ++.++|+||||+++|+|++|..||........   .    .......         ....+...+..+.+++.+||+
T Consensus       217 ~--~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  294 (321)
T 2qkw_B          217 R--LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA  294 (321)
T ss_dssp             B--CCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTC
T ss_pred             C--CCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcC
Confidence            4  78999999999999999999999865432211   0    0111111         112233456789999999999


Q ss_pred             CCCCCCCChhhhhcCc
Q 041080          216 VNPNDRPTVTELMEHP  231 (247)
Q Consensus       216 ~~p~~Rps~~~il~~p  231 (247)
                      .+|.+|||+++++++.
T Consensus       295 ~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          295 LSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSGGGSCCHHHHHHHH
T ss_pred             CCcccCcCHHHHHHHH
Confidence            9999999999999764


No 213
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4.8e-43  Score=285.82  Aligned_cols=230  Identities=28%  Similarity=0.430  Sum_probs=181.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-----------CCceeeeceeeecCC----cEEEEEeccccCc
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-----------QDNIVQYLGTDKDEN----RLYIFLELVTKGS   65 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~~~~----~~~lv~e~~~~~~   65 (247)
                      +|+.||||++..      .....+.+.+|+.+++++.           |+||+++++++...+    ..+++||++ +++
T Consensus        43 ~~~~vaiK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~  115 (373)
T 1q8y_A           43 NNTHVAMKIVRG------DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GEN  115 (373)
T ss_dssp             TTEEEEEEEECS------CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEE
T ss_pred             CCcEEEEEEecC------CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCC
Confidence            478999999963      2334566788999999886           789999999987654    789999999 779


Q ss_pred             HHHHHHhc---CCCHHHHHHHHHHHHHHHHHhhhC-CeeecCCCCCcEEEcC------CCCeEEcccccccccCcccccc
Q 041080           66 LANLYQKY---HLSDSQVSSYTRQILNGLVYLHER-NVVHRDIKCANILVDA------SGSVKLADFGLAKATTMNDLKS  135 (247)
Q Consensus        66 L~~~l~~~---~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~~~ni~~~~------~~~~~l~df~~~~~~~~~~~~~  135 (247)
                      |.+++...   ++++..++.++.|++.||.+||++ |++|+||||+||+++.      .+.++|+|||.+...... ...
T Consensus       116 L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~  194 (373)
T 1q8y_A          116 LLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-YTN  194 (373)
T ss_dssp             HHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC-CCS
T ss_pred             HHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC-CCC
Confidence            99998763   499999999999999999999998 9999999999999953      347999999998655432 334


Q ss_pred             CCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh------HHHHHhhc--CC-------------
Q 041080          136 CKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV------QALFRIGK--GE-------------  194 (247)
Q Consensus       136 ~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~------~~~~~~~~--~~-------------  194 (247)
                      ..+++.|+|||.+.+..  ++.++||||||+++|+|++|..||......      .....+..  +.             
T Consensus       195 ~~~t~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  272 (373)
T 1q8y_A          195 SIQTREYRSPEVLLGAP--WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR  272 (373)
T ss_dssp             CCSCGGGCCHHHHHTCC--CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHH
T ss_pred             CCCCccccCcHHHhCCC--CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhh
Confidence            56899999999997654  789999999999999999999999754421      11111100  00             


Q ss_pred             --------------------------CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCCCCCC
Q 041080          195 --------------------------LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQTP  240 (247)
Q Consensus       195 --------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~~~~~  240 (247)
                                                ...++...++++.++|.+||+.||.+|||++++++||||+......
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  344 (373)
T 1q8y_A          273 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME  344 (373)
T ss_dssp             HHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred             hhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccCcc
Confidence                                      0123345677899999999999999999999999999999875543


No 214
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.5e-42  Score=278.35  Aligned_cols=222  Identities=29%  Similarity=0.530  Sum_probs=185.8

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeee--cCCcEEEEEeccccCcHHHHHHhc--CCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDK--DENRLYIFLELVTKGSLANLYQKY--HLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~--~~~   76 (247)
                      +|+.||||++...     .....+.+.+|+.++++++||||+++++++.  ..+..++||||+++++|.++++..  .++
T Consensus        51 ~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  125 (327)
T 3lxl_A           51 TGALVAVKQLQHS-----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD  125 (327)
T ss_dssp             CSEEEEEEEESSC-----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCC
T ss_pred             cceEEEEEEeccC-----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCC
Confidence            4778999998643     3455677899999999999999999999876  456789999999999999999763  499


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~  151 (247)
                      +..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+.
T Consensus       126 ~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  205 (327)
T 3lxl_A          126 ASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN  205 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccC
Confidence            99999999999999999999999999999999999999999999999987544322     2233467779999998655


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh---------------HHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcC
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV---------------QALFRIGKGELPSVPSSLSRDARDFILKCLQV  216 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  216 (247)
                      .  ++.++||||||+++++|++|..||......               .....+........+..+++++.+++.+||+.
T Consensus       206 ~--~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  283 (327)
T 3lxl_A          206 I--FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAP  283 (327)
T ss_dssp             E--EEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             C--CChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCC
Confidence            4  788999999999999999999998654332               22333444455566788999999999999999


Q ss_pred             CCCCCCChhhhhc
Q 041080          217 NPNDRPTVTELME  229 (247)
Q Consensus       217 ~p~~Rps~~~il~  229 (247)
                      +|.+|||++++++
T Consensus       284 dP~~Rps~~ell~  296 (327)
T 3lxl_A          284 SPQDRPSFSALGP  296 (327)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999965


No 215
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7.3e-43  Score=284.43  Aligned_cols=220  Identities=25%  Similarity=0.433  Sum_probs=180.0

Q ss_pred             eEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeee-cCCcEEEEEeccccCcHHHHHHhc--CCCHHHH
Q 041080            4 FFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDK-DENRLYIFLELVTKGSLANLYQKY--HLSDSQV   80 (247)
Q Consensus         4 ~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~   80 (247)
                      .||+|.+...    ......+.+.+|+.++++++||||+++++++. .++..++||||+++++|.++++..  .+++..+
T Consensus       119 ~vavK~~~~~----~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~  194 (373)
T 3c1x_A          119 HCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL  194 (373)
T ss_dssp             EEEEEECCSC----SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHH
T ss_pred             EEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHH
Confidence            5788887542    23445678899999999999999999999864 456889999999999999999764  3889999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc------cccCCCCCCccCCcccccCCCC
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND------LKSCKGTPFWMAPEVVNSKNDG  154 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~  154 (247)
                      +.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......      .....++..|+|||.+.+..  
T Consensus       195 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--  272 (373)
T 3c1x_A          195 IGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK--  272 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCC--
Confidence            9999999999999999999999999999999999999999999986543222      12233567899999986554  


Q ss_pred             CCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++||||||+++|+|++ |..||......+....+..+.....+..+++.+.+++.+||..+|.+|||++++++
T Consensus       273 ~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~  348 (373)
T 3c1x_A          273 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  348 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            7899999999999999999 77888877777777666666666677889999999999999999999999999986


No 216
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=5e-42  Score=271.65  Aligned_cols=219  Identities=21%  Similarity=0.247  Sum_probs=180.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~   77 (247)
                      +|+.||||++.....       .+.+.+|+.+++.+ +|+|++++++++......++||||+ +++|.++++..  .+++
T Consensus        34 ~~~~vavK~~~~~~~-------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~  105 (298)
T 1csn_A           34 NNQQVAIKFEPRRSD-------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSV  105 (298)
T ss_dssp             TTEEEEEEEEECCTT-------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCH
T ss_pred             CCcEEEEEEeccCCc-------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCH
Confidence            478999999865432       12367899999999 7999999999999999999999999 88999999864  4899


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC-----eEEcccccccccCccc---------cccCCCCCCcc
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS-----VKLADFGLAKATTMND---------LKSCKGTPFWM  143 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~-----~~l~df~~~~~~~~~~---------~~~~~~~~~~~  143 (247)
                      ..++.++.|++.||.+||++|++|+||||+||+++.++.     ++|+|||.+.......         .....|++.|+
T Consensus       106 ~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  185 (298)
T 1csn_A          106 KTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM  185 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccC
Confidence            999999999999999999999999999999999987776     9999999986544322         23445899999


Q ss_pred             CCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChh---hHHHHHhh----cCCCCCCCCcCCHHHHHHHHHHhcC
Q 041080          144 APEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEG---VQALFRIG----KGELPSVPSSLSRDARDFILKCLQV  216 (247)
Q Consensus       144 aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~  216 (247)
                      |||.+.+..  ++.++||||||+++|+|++|..||.....   ......+.    ....+.....+|+++.+++.+||+.
T Consensus       186 aPE~~~~~~--~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  263 (298)
T 1csn_A          186 SINTHLGRE--QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNL  263 (298)
T ss_dssp             CHHHHTTCC--CCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHC
T ss_pred             CchhhcCCC--CChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcC
Confidence            999986544  79999999999999999999999977432   22222211    1222233457899999999999999


Q ss_pred             CCCCCCChhhhhc
Q 041080          217 NPNDRPTVTELME  229 (247)
Q Consensus       217 ~p~~Rps~~~il~  229 (247)
                      +|.+|||++++++
T Consensus       264 dp~~RP~~~~l~~  276 (298)
T 1csn_A          264 AFDATPDYDYLQG  276 (298)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999875


No 217
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.4e-42  Score=277.96  Aligned_cols=222  Identities=25%  Similarity=0.354  Sum_probs=176.3

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC----cEEEEEeccccCcHHHHHHhcCCCH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN----RLYIFLELVTKGSLANLYQKYHLSD   77 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~   77 (247)
                      |+.||||++...      ........+|+.++++++||||+++++++....    .+++||||+++++|.++++...+++
T Consensus        47 ~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~  120 (322)
T 3soc_A           47 NEYVAVKIFPIQ------DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSW  120 (322)
T ss_dssp             TEEEEEEEECGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCH
T ss_pred             CCEEEEEEeecC------chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCH
Confidence            678999999542      233445567999999999999999999987754    4799999999999999999989999


Q ss_pred             HHHHHHHHHHHHHHHHhhhC----------CeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCcc
Q 041080           78 SQVSSYTRQILNGLVYLHER----------NVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWM  143 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~----------~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~  143 (247)
                      ..++.++.|++.||.|||+.          |++|+||||+||+++.++.++|+|||.+.......    .....+++.|+
T Consensus       121 ~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~  200 (322)
T 3soc_A          121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM  200 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCcccc
Confidence            99999999999999999999          99999999999999999999999999986543222    23356899999


Q ss_pred             CCcccccCCC---CCCcchhHHHHHHHHHHHHhCCCCCCCChh----------------hHHHHHhhcC-CCCCCCC---
Q 041080          144 APEVVNSKND---GYGLTADIWSLGCTVLEMLTRRPPYSHLEG----------------VQALFRIGKG-ELPSVPS---  200 (247)
Q Consensus       144 aPE~~~~~~~---~~~~~~Di~slG~ll~~l~~g~~p~~~~~~----------------~~~~~~~~~~-~~~~~~~---  200 (247)
                      |||.+.+...   .++.++||||||+++|+|++|..||.....                .......... ..+..+.   
T Consensus       201 aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (322)
T 3soc_A          201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQ  280 (322)
T ss_dssp             CHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGG
T ss_pred             CHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCcccccc
Confidence            9999865321   245678999999999999999999864321                1111222222 1222222   


Q ss_pred             --cCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          201 --SLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       201 --~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                        ..++++.+++.+||+.||.+|||++++++
T Consensus       281 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          281 KHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence              23456999999999999999999999986


No 218
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=6.4e-42  Score=270.10  Aligned_cols=224  Identities=25%  Similarity=0.529  Sum_probs=175.8

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      ...||+|++....   ......+.+.+|+.++++++||||++++++. ..+..++||||+.+++|.+++...  .+++..
T Consensus        46 ~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  121 (289)
T 3og7_A           46 HGDVAVKMLNVTA---PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKK  121 (289)
T ss_dssp             SSEEEEEEESCSS---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHH
T ss_pred             cCceEEEEEeccC---CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHH
Confidence            3468999997543   3455677899999999999999999999965 556789999999999999998543  489999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc----cccccCCCCCCccCCcccccC-CCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM----NDLKSCKGTPFWMAPEVVNSK-NDG  154 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~-~~~  154 (247)
                      ++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.....    .......+++.|+|||.+... ...
T Consensus       122 ~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  201 (289)
T 3og7_A          122 LIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP  201 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CC
T ss_pred             HHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCC
Confidence            999999999999999999999999999999999999999999999864432    222344589999999998522 233


Q ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHh-hcCC----CCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          155 YGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRI-GKGE----LPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       155 ~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++.++||||||++++++++|..||............ ....    .......+|+.+.+++.+||+.+|.+|||++++++
T Consensus       202 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             SCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            688999999999999999999999876554443332 2222    22344578999999999999999999999999985


No 219
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.1e-42  Score=276.76  Aligned_cols=218  Identities=22%  Similarity=0.307  Sum_probs=178.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~   77 (247)
                      +|+.||||++......       +.+.+|+.+++++ +||||+++++++..++..++||||+ +++|.+++..  ..+++
T Consensus        33 ~~~~vavK~~~~~~~~-------~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~  104 (330)
T 2izr_A           33 TNEYVAIKLEPMKSRA-------PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSL  104 (330)
T ss_dssp             TTEEEEEEEEETTCSS-------CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCH
T ss_pred             CCcEEEEEEeccccch-------HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCH
Confidence            4789999998754321       2477999999999 8999999999999999999999999 8899999985  46999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC-----eEEcccccccccCccc---------cccCCCCCCcc
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS-----VKLADFGLAKATTMND---------LKSCKGTPFWM  143 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~-----~~l~df~~~~~~~~~~---------~~~~~~~~~~~  143 (247)
                      ..++.++.|++.||.+||+.|++|+||||+||+++.++.     ++|+|||.+.......         .....|++.|+
T Consensus       105 ~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  184 (330)
T 2izr_A          105 KTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYM  184 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCcccc
Confidence            999999999999999999999999999999999998887     9999999987543322         23456899999


Q ss_pred             CCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHH---HHHhhcCC----CCCCCCcCCHHHHHHHHHHhcC
Q 041080          144 APEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQA---LFRIGKGE----LPSVPSSLSRDARDFILKCLQV  216 (247)
Q Consensus       144 aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~  216 (247)
                      |||.+.+..  ++.++|+||||+++|+|++|..||........   ...+....    ........| ++.+++.+||+.
T Consensus       185 aPE~~~~~~--~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~  261 (330)
T 2izr_A          185 SINTHLGKE--QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRL  261 (330)
T ss_dssp             CHHHHTTCC--CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHC
T ss_pred             ChHHHcCCC--CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhC
Confidence            999997644  79999999999999999999999987543222   22221111    111122345 999999999999


Q ss_pred             CCCCCCChhhhhc
Q 041080          217 NPNDRPTVTELME  229 (247)
Q Consensus       217 ~p~~Rps~~~il~  229 (247)
                      +|.+||+++++++
T Consensus       262 ~p~~RP~~~~l~~  274 (330)
T 2izr_A          262 DFFEKPDYDYLRK  274 (330)
T ss_dssp             CTTCCCCHHHHHH
T ss_pred             CCCCCCCHHHHHH
Confidence            9999999998876


No 220
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=8.3e-42  Score=271.66  Aligned_cols=216  Identities=28%  Similarity=0.547  Sum_probs=176.4

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC----CCH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH----LSD   77 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~   77 (247)
                      |+.||||.+..       ....+.+.+|+.++++++||||+++++++.  +..++||||+++++|.+++....    ++.
T Consensus        31 ~~~vavK~~~~-------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  101 (307)
T 2eva_A           31 AKDVAIKQIES-------ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTA  101 (307)
T ss_dssp             TEEEEEEECSS-------TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCH
T ss_pred             CeeEEEEEecC-------hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCH
Confidence            67899998853       223567889999999999999999999876  34799999999999999997653    788


Q ss_pred             HHHHHHHHHHHHHHHHhhh---CCeeecCCCCCcEEEcCCCC-eEEcccccccccCccccccCCCCCCccCCcccccCCC
Q 041080           78 SQVSSYTRQILNGLVYLHE---RNVVHRDIKCANILVDASGS-VKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKND  153 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~---~~i~h~dl~~~ni~~~~~~~-~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  153 (247)
                      ..++.++.|++.||.+||+   +|++|+||||+||+++.++. ++|+|||.+...... .....|+..|+|||.+.+.. 
T Consensus       102 ~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-~~~~~gt~~y~aPE~~~~~~-  179 (307)
T 2eva_A          102 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-MTNNKGSAAWMAPEVFEGSN-  179 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------CCTTSSCHHHHTCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-cccCCCCCceEChhhhCCCC-
Confidence            9999999999999999999   89999999999999998887 799999998654432 23345899999999996544 


Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCChhh--HHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          154 GYGLTADIWSLGCTVLEMLTRRPPYSHLEGV--QALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       154 ~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                       ++.++||||||+++|+|++|..||......  ...........+..+..+++.+.+++.+||+.+|.+|||++++++
T Consensus       180 -~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          180 -YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence             789999999999999999999999754332  233344455556677789999999999999999999999999987


No 221
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=3.5e-42  Score=273.74  Aligned_cols=226  Identities=28%  Similarity=0.416  Sum_probs=184.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc----CCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY----HLS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~   76 (247)
                      +|+.||||++..... .......+.+.+|+.++++++||||+++++++...+..++||||+++++|.+++...    .++
T Consensus        53 ~~~~vavK~~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  131 (307)
T 2nru_A           53 NNTTVAVKKLAAMVD-ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS  131 (307)
T ss_dssp             SSCEEEEEEECCCTT-SCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCC
T ss_pred             CCceEEEEEEecccC-cchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCC
Confidence            478899999975432 223445677899999999999999999999999999999999999999999998642    489


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc----cccCCCCCCccCCcccccCC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND----LKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~  152 (247)
                      +..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+.......    .....+++.|+|||.+.+. 
T Consensus       132 ~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-  210 (307)
T 2nru_A          132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-  210 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE-
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCC-
Confidence            99999999999999999999999999999999999999999999999986543221    2234588999999998643 


Q ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHH----HHh----------hcCCCCCCCCcCCHHHHHHHHHHhcCCC
Q 041080          153 DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQAL----FRI----------GKGELPSVPSSLSRDARDFILKCLQVNP  218 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~----~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (247)
                        ++.++|+||||+++|+|++|..||.........    ...          ........+...++.+.+++.+||..+|
T Consensus       211 --~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p  288 (307)
T 2nru_A          211 --ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKK  288 (307)
T ss_dssp             --ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSST
T ss_pred             --CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCc
Confidence              688999999999999999999999765432211    111          1112223344567789999999999999


Q ss_pred             CCCCChhhhhcC
Q 041080          219 NDRPTVTELMEH  230 (247)
Q Consensus       219 ~~Rps~~~il~~  230 (247)
                      .+|||+++++++
T Consensus       289 ~~Rps~~~l~~~  300 (307)
T 2nru_A          289 NKRPDIKKVQQL  300 (307)
T ss_dssp             TTSCCHHHHHHH
T ss_pred             ccCcCHHHHHHH
Confidence            999999999863


No 222
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=4.8e-43  Score=281.01  Aligned_cols=226  Identities=24%  Similarity=0.364  Sum_probs=179.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC-----C
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH-----L   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~   75 (247)
                      +|+.||||++.......    ....+.+|+.+++.++||||+++++++...+..++||||+.+++|.+++....     +
T Consensus        53 ~~~~vavK~~~~~~~~~----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  128 (326)
T 3uim_A           53 DGTLVAVKRLKEERTQG----GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPL  128 (326)
T ss_dssp             SSCCEEEEECCC---------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCC
T ss_pred             CCCEEEEEEeccccCch----HHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCC
Confidence            47899999997643211    12257899999999999999999999999999999999999999999997643     8


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhC---CeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccc
Q 041080           76 SDSQVSSYTRQILNGLVYLHER---NVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVN  149 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~  149 (247)
                      ++..++.++.|++.||.+||+.   |++|+||||+||+++.++.++|+|||.+.......   .....|++.|+|||.+.
T Consensus       129 ~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  208 (326)
T 3uim_A          129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS  208 (326)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhc
Confidence            9999999999999999999999   99999999999999999999999999987543222   23344899999999986


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChh-----hHHHHHhhc---C-C---------CCCCCCcCCHHHHHHHH
Q 041080          150 SKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEG-----VQALFRIGK---G-E---------LPSVPSSLSRDARDFIL  211 (247)
Q Consensus       150 ~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~-----~~~~~~~~~---~-~---------~~~~~~~~~~~~~~li~  211 (247)
                      +..  ++.++||||||+++|+|++|..||.....     .........   . .         ....+...++.+.+++.
T Consensus       209 ~~~--~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  286 (326)
T 3uim_A          209 TGK--SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVAL  286 (326)
T ss_dssp             HSE--ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHH
T ss_pred             cCC--CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHH
Confidence            555  78999999999999999999999952211     111111110   0 0         01122234578999999


Q ss_pred             HHhcCCCCCCCChhhhhcCcc
Q 041080          212 KCLQVNPNDRPTVTELMEHPF  232 (247)
Q Consensus       212 ~~l~~~p~~Rps~~~il~~p~  232 (247)
                      +||+.+|.+|||+++++++-.
T Consensus       287 ~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          287 LCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHhCcCCccCCCHHHHHHHhc
Confidence            999999999999999998654


No 223
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=3.4e-42  Score=275.01  Aligned_cols=225  Identities=22%  Similarity=0.381  Sum_probs=180.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeee----cCCcEEEEEeccccCcHHHHHHh----
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDK----DENRLYIFLELVTKGSLANLYQK----   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~e~~~~~~L~~~l~~----   72 (247)
                      +|+.||||++...     .....+.+.+|+.+++.++||||+++++++.    .....++||||+.+++|.+++..    
T Consensus        53 ~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~  127 (317)
T 2buj_A           53 DGHFYALKRILCH-----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDK  127 (317)
T ss_dssp             TCCEEEEEEEEES-----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTT
T ss_pred             CCcEEEEEEEecC-----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhc
Confidence            4789999999653     3455677889999999999999999999986    34578999999999999998875    


Q ss_pred             -cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----------cccCCCCC
Q 041080           73 -YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----------LKSCKGTP  140 (247)
Q Consensus        73 -~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----------~~~~~~~~  140 (247)
                       ..+++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......           .....+++
T Consensus       128 ~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~  207 (317)
T 2buj_A          128 GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI  207 (317)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCG
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCc
Confidence             348999999999999999999999999999999999999999999999999875433211           11233688


Q ss_pred             CccCCcccccCC-CCCCcchhHHHHHHHHHHHHhCCCCCCCChhh--HHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCC
Q 041080          141 FWMAPEVVNSKN-DGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV--QALFRIGKGELPSVPSSLSRDARDFILKCLQVN  217 (247)
Q Consensus       141 ~~~aPE~~~~~~-~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  217 (247)
                      .|+|||.+.+.. ..++.++||||||+++|+|++|..||......  ..............+..+++++.+++.+||+.+
T Consensus       208 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  287 (317)
T 2buj_A          208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVD  287 (317)
T ss_dssp             GGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSS
T ss_pred             ccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcC
Confidence            999999985432 12578999999999999999999998542111  112222222223344678999999999999999


Q ss_pred             CCCCCChhhhhcC
Q 041080          218 PNDRPTVTELMEH  230 (247)
Q Consensus       218 p~~Rps~~~il~~  230 (247)
                      |.+|||+++++++
T Consensus       288 p~~Rps~~~ll~~  300 (317)
T 2buj_A          288 PHQRPHIPLLLSQ  300 (317)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             hhhCCCHHHHHHH
Confidence            9999999999975


No 224
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=6.9e-42  Score=274.30  Aligned_cols=222  Identities=27%  Similarity=0.486  Sum_probs=182.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC--cEEEEEeccccCcHHHHHHhcC--CC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN--RLYIFLELVTKGSLANLYQKYH--LS   76 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~--~~   76 (247)
                      +|+.||||++...     .....+.+.+|+.++++++||||+++++++...+  ..++||||+++++|.+++....  ++
T Consensus        69 ~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~  143 (326)
T 2w1i_A           69 TGEVVAVKKLQHS-----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID  143 (326)
T ss_dssp             CCEEEEEEEESSC-----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSC
T ss_pred             CceEEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCC
Confidence            4788999998642     3445677899999999999999999999876644  7899999999999999998753  89


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccC
Q 041080           77 DSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSK  151 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~  151 (247)
                      +..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+.
T Consensus       144 ~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  223 (326)
T 2w1i_A          144 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES  223 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCC
Confidence            99999999999999999999999999999999999999999999999987554332     1223356679999998655


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh----------------HHHHHhhcCCCCCCCCcCCHHHHHHHHHHhc
Q 041080          152 NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV----------------QALFRIGKGELPSVPSSLSRDARDFILKCLQ  215 (247)
Q Consensus       152 ~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  215 (247)
                      .  ++.++|+||||+++++|++|..|+......                .....+........+..+++++.+++.+||+
T Consensus       224 ~--~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  301 (326)
T 2w1i_A          224 K--FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWN  301 (326)
T ss_dssp             E--EEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSC
T ss_pred             C--CCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcC
Confidence            4  788999999999999999999887543211                1122233334445677899999999999999


Q ss_pred             CCCCCCCChhhhhc
Q 041080          216 VNPNDRPTVTELME  229 (247)
Q Consensus       216 ~~p~~Rps~~~il~  229 (247)
                      .+|.+|||++++++
T Consensus       302 ~dP~~Rps~~el~~  315 (326)
T 2w1i_A          302 NNVNQRPSFRDLAL  315 (326)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999975


No 225
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=4.3e-42  Score=276.20  Aligned_cols=221  Identities=23%  Similarity=0.455  Sum_probs=185.1

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--------
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--------   73 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--------   73 (247)
                      +.||+|.+...    ......+.+.+|+.+++++ +||||+++++++...+..++||||+++++|.+++...        
T Consensus        77 ~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~  152 (333)
T 2i1m_A           77 LKVAVKMLKST----AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDP  152 (333)
T ss_dssp             CEEEEEEECTT----CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-
T ss_pred             hHHHHHhcccc----cChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccc
Confidence            47999998643    2344567789999999999 8999999999999999999999999999999998643        


Q ss_pred             -------CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc----ccCCCCCCc
Q 041080           74 -------HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL----KSCKGTPFW  142 (247)
Q Consensus        74 -------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~  142 (247)
                             .+++..++.++.|++.||.+||+.|++|+||||+||+++.++.++|+|||.+........    ....++..|
T Consensus       153 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y  232 (333)
T 2i1m_A          153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW  232 (333)
T ss_dssp             ------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGG
T ss_pred             cccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccc
Confidence                   378999999999999999999999999999999999999999999999999875433321    223356689


Q ss_pred             cCCcccccCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHH-hhcCCCCCCCCcCCHHHHHHHHHHhcCCCCC
Q 041080          143 MAPEVVNSKNDGYGLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFR-IGKGELPSVPSSLSRDARDFILKCLQVNPND  220 (247)
Q Consensus       143 ~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  220 (247)
                      +|||.+.+..  ++.++||||||+++|+|++ |..||........... .........+...++.+.+++.+||+.+|.+
T Consensus       233 ~aPE~~~~~~--~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  310 (333)
T 2i1m_A          233 MAPESIFDCV--YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH  310 (333)
T ss_dssp             SCHHHHHHCC--CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cCHHHhccCC--CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhh
Confidence            9999986544  7899999999999999998 8999977654444333 3333344556778999999999999999999


Q ss_pred             CCChhhhhc
Q 041080          221 RPTVTELME  229 (247)
Q Consensus       221 Rps~~~il~  229 (247)
                      |||++++++
T Consensus       311 Rps~~~l~~  319 (333)
T 2i1m_A          311 RPTFQQICS  319 (333)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999986


No 226
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=3.9e-42  Score=292.27  Aligned_cols=225  Identities=28%  Similarity=0.456  Sum_probs=192.7

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHh---cCCCHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK---YHLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~   78 (247)
                      +..||||++.....      ..+.+.+|+.++++++||||+++++++.. +..++||||+.+++|.+++..   ..+++.
T Consensus       291 ~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~  363 (535)
T 2h8h_A          291 TTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP  363 (535)
T ss_dssp             TEEEEEEEECTTSS------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHH
T ss_pred             CceEEEEEeCCCCC------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHH
Confidence            45799999975331      23568899999999999999999999876 678999999999999999964   348999


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc---cccCCCCCCccCCcccccCCCCC
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND---LKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      .++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......   .....++..|+|||.+....  +
T Consensus       364 ~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  441 (535)
T 2h8h_A          364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--F  441 (535)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCC--C
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCC--C
Confidence            999999999999999999999999999999999999999999999997654332   22333567899999986544  7


Q ss_pred             CcchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcC--cc
Q 041080          156 GLTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEH--PF  232 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~--p~  232 (247)
                      +.++||||||+++|+|++ |..||......+....+..+.....+..+++++.++|.+||..+|.+|||++++++.  .+
T Consensus       442 ~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          442 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  521 (535)
T ss_dssp             CHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999999999999999999 999999888888887777776666778899999999999999999999999999873  55


Q ss_pred             CCC
Q 041080          233 VKR  235 (247)
Q Consensus       233 ~~~  235 (247)
                      |..
T Consensus       522 ~~~  524 (535)
T 2h8h_A          522 FTS  524 (535)
T ss_dssp             SCC
T ss_pred             hhc
Confidence            554


No 227
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=5.4e-42  Score=269.61  Aligned_cols=219  Identities=27%  Similarity=0.478  Sum_probs=182.0

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec----------------CCcEEEEEeccccC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD----------------ENRLYIFLELVTKG   64 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----------------~~~~~lv~e~~~~~   64 (247)
                      +|+.||+|++....         +.+.+|+.++++++||||+++++++..                ....++||||++++
T Consensus        35 ~~~~vavK~~~~~~---------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  105 (284)
T 2a19_B           35 DGKTYVIKRVKYNN---------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG  105 (284)
T ss_dssp             TCCEEEEEEEECCS---------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSC
T ss_pred             CCeEEEEEEecccc---------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCC
Confidence            58899999997542         135689999999999999999998754                44689999999999


Q ss_pred             cHHHHHHhc---CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-cccCCCCC
Q 041080           65 SLANLYQKY---HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-LKSCKGTP  140 (247)
Q Consensus        65 ~L~~~l~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~  140 (247)
                      +|.++++..   .+++..++.++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||.+....... .....+++
T Consensus       106 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  185 (284)
T 2a19_B          106 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTL  185 (284)
T ss_dssp             BHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCC
T ss_pred             CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcc
Confidence            999999754   58999999999999999999999999999999999999999999999999986554332 33455899


Q ss_pred             CccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCC
Q 041080          141 FWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPND  220 (247)
Q Consensus       141 ~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  220 (247)
                      .|+|||.+.+..  ++.++|+||||+++++|++|..|+...  ..........   ..+..++..+++++.+||..+|.+
T Consensus       186 ~y~aPE~~~~~~--~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~  258 (284)
T 2a19_B          186 RYMSPEQISSQD--YGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDG---IISDIFDKKEKTLLQKLLSKKPED  258 (284)
T ss_dssp             TTSCHHHHHCSC--CCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTT---CCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cccChhhhccCC--CcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcc---cccccCCHHHHHHHHHHccCChhh
Confidence            999999996544  789999999999999999998886432  2222222222   345678999999999999999999


Q ss_pred             CCChhhhhcCccCCC
Q 041080          221 RPTVTELMEHPFVKR  235 (247)
Q Consensus       221 Rps~~~il~~p~~~~  235 (247)
                      |||+.+++++.+.-.
T Consensus       259 Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          259 RPNTSEILRTLTVWK  273 (284)
T ss_dssp             SCCHHHHHHHHHHHT
T ss_pred             CcCHHHHHHHHHHHh
Confidence            999999999986543


No 228
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=3.4e-42  Score=294.98  Aligned_cols=229  Identities=21%  Similarity=0.320  Sum_probs=183.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeec------CCcEEEEEeccccCcHHHHHHhc-
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKD------ENRLYIFLELVTKGSLANLYQKY-   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~-   73 (247)
                      +|+.||||++...    ......+.+.+|+.++++++||||+++++++..      ++..++||||+++++|.+++... 
T Consensus        38 tg~~VAVKvi~~~----~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~  113 (676)
T 3qa8_A           38 TGEQVAIKQCRQE----LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE  113 (676)
T ss_dssp             TTCCEEECCCCSC----CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSS
T ss_pred             CCcEEEEEEeccc----CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcc
Confidence            4789999998643    234556778999999999999999999998765      67889999999999999999764 


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC---eEEcccccccccCccc-cccCCCCCCccCCc
Q 041080           74 ---HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS---VKLADFGLAKATTMND-LKSCKGTPFWMAPE  146 (247)
Q Consensus        74 ---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~---~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE  146 (247)
                         ++++..++.++.|++.||.|||+.|++|+||+|+||+++.++.   ++|+|||.+....... .....++..|+|||
T Consensus       114 ~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE  193 (676)
T 3qa8_A          114 NCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE  193 (676)
T ss_dssp             CTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChH
Confidence               4899999999999999999999999999999999999997765   8999999987655433 33456899999999


Q ss_pred             ccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHH---------HHh-----hcC-----C----CCCCCCcCC
Q 041080          147 VVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQAL---------FRI-----GKG-----E----LPSVPSSLS  203 (247)
Q Consensus       147 ~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~---------~~~-----~~~-----~----~~~~~~~~~  203 (247)
                      .+.+..  ++.++|+||+|+++|++++|..||.........         ...     ..+     .    .......++
T Consensus       194 ~l~~~~--~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls  271 (676)
T 3qa8_A          194 LLEQKK--YTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILA  271 (676)
T ss_dssp             SSCCSC--CSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGH
T ss_pred             HhccCC--CCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhh
Confidence            996544  789999999999999999999999654221110         000     000     0    011223467


Q ss_pred             HHHHHHHHHHhcCCCCCCCChhhhhcCccCCC
Q 041080          204 RDARDFILKCLQVNPNDRPTVTELMEHPFVKR  235 (247)
Q Consensus       204 ~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~  235 (247)
                      +.+.+++.+||..||.+|||++++++||||+.
T Consensus       272 ~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          272 GKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            89999999999999999999999999999975


No 229
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.3e-41  Score=268.39  Aligned_cols=221  Identities=28%  Similarity=0.494  Sum_probs=181.5

Q ss_pred             eEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHHHH
Q 041080            4 FFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQVS   81 (247)
Q Consensus         4 ~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~   81 (247)
                      .||||++.....  ......+.+.+|+.++++++||||+++++++.... .++|+||+++++|.+++...  .+++..++
T Consensus        48 ~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~  124 (291)
T 1u46_A           48 SVAVKCLKPDVL--SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLS  124 (291)
T ss_dssp             EEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHH
T ss_pred             EEEEEEEccCcc--CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHH
Confidence            589999875432  23345678899999999999999999999988765 88999999999999998764  49999999


Q ss_pred             HHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc-----cccCCCCCCccCCcccccCCCCCC
Q 041080           82 SYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND-----LKSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        82 ~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      .++.|++.||.+||++|++|+||||+||+++.++.++|+|||.+.......     .....++..|+|||.+.+..  ++
T Consensus       125 ~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~  202 (291)
T 1u46_A          125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT--FS  202 (291)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE--EE
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCC--CC
Confidence            999999999999999999999999999999999999999999986554332     12234667899999986544  68


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcC-CCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          157 LTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKG-ELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      .++|+||||+++++|++ |..||...........+... .....+..+++++.+++.+||..+|.+|||++++++
T Consensus       203 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          203 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            89999999999999999 99999888777776665443 234456788999999999999999999999999986


No 230
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=1.7e-41  Score=268.87  Aligned_cols=205  Identities=28%  Similarity=0.448  Sum_probs=165.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHH-hhcCCCceeeeceeeec----CCcEEEEEeccccCcHHHHHHhc--
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLL-SQFEQDNIVQYLGTDKD----ENRLYIFLELVTKGSLANLYQKY--   73 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~--   73 (247)
                      +|+.||||++...          ..+.+|+.++ +.++||||+++++++..    .+..++||||+++++|.+++...  
T Consensus        42 ~~~~vaiK~~~~~----------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  111 (299)
T 3m2w_A           42 TQEKFALKMLQDC----------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD  111 (299)
T ss_dssp             TCCEEEEEEEECS----------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTT
T ss_pred             CCcEEEEEEeccc----------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccC
Confidence            4789999999631          2456888888 44589999999999876    67889999999999999999875  


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC---CCCeEEcccccccccCccccccCCCCCCccCCcccc
Q 041080           74 -HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA---SGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVN  149 (247)
Q Consensus        74 -~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~---~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~  149 (247)
                       .+++..++.++.|++.||.+||+.|++|+||||+||+++.   ++.++|+|||.+....                    
T Consensus       112 ~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~--------------------  171 (299)
T 3m2w_A          112 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--------------------  171 (299)
T ss_dssp             CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT--------------------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc--------------------
Confidence             3999999999999999999999999999999999999998   7889999999875322                    


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcC---CCCCCC----CcCCHHHHHHHHHHhcCCCCCCC
Q 041080          150 SKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKG---ELPSVP----SSLSRDARDFILKCLQVNPNDRP  222 (247)
Q Consensus       150 ~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp  222 (247)
                        ...++.++|+||||+++|+|++|..||...............   .....+    ..+++++.+++.+||+.+|.+||
T Consensus       172 --~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp  249 (299)
T 3m2w_A          172 --GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM  249 (299)
T ss_dssp             --TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             --cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCC
Confidence              122678999999999999999999999765544332221111   111122    46899999999999999999999


Q ss_pred             ChhhhhcCccCCCCC
Q 041080          223 TVTELMEHPFVKRPL  237 (247)
Q Consensus       223 s~~~il~~p~~~~~~  237 (247)
                      |++++++||||+...
T Consensus       250 s~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          250 TITEFMNHPWIMQST  264 (299)
T ss_dssp             CHHHHHTSHHHHTGG
T ss_pred             CHHHHhcChhhcccc
Confidence            999999999998754


No 231
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=8.4e-42  Score=275.83  Aligned_cols=225  Identities=19%  Similarity=0.220  Sum_probs=176.2

Q ss_pred             CceEEEEEEeecCCCccch------HHHHHHHHHHHHHhhcCCCceeeeceeeec----CCcEEEEEeccccCcHHHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGK------QSILQLEQEISLLSQFEQDNIVQYLGTDKD----ENRLYIFLELVTKGSLANLYQ   71 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~   71 (247)
                      +..+|||++.........+      .....+.+|+..++.++||||+++++++..    ....++||||+ +++|.+++.
T Consensus        65 ~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~  143 (345)
T 2v62_A           65 DARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISG  143 (345)
T ss_dssp             GCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCB
T ss_pred             cceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHH
Confidence            5689999997643211100      112236678899999999999999999877    77899999999 889999987


Q ss_pred             hc-CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC--CeEEcccccccccCccc---------cccCCCC
Q 041080           72 KY-HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG--SVKLADFGLAKATTMND---------LKSCKGT  139 (247)
Q Consensus        72 ~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~--~~~l~df~~~~~~~~~~---------~~~~~~~  139 (247)
                      .. .+++..++.++.|++.||.|||+.|++|+||||+||+++.++  .++|+|||.+.......         .....++
T Consensus       144 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt  223 (345)
T 2v62_A          144 QNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGT  223 (345)
T ss_dssp             GGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSC
T ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCC
Confidence            65 599999999999999999999999999999999999999887  99999999986543221         1344689


Q ss_pred             CCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHH-HHHhhcCCCCCC---------CCcCCHHHHHH
Q 041080          140 PFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQA-LFRIGKGELPSV---------PSSLSRDARDF  209 (247)
Q Consensus       140 ~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~l  209 (247)
                      ..|+|||.+.+..  ++.++||||||+++|+|++|..||........ ............         ...+++++.++
T Consensus       224 ~~y~aPE~~~~~~--~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  301 (345)
T 2v62_A          224 IEFTSLDAHKGVA--LSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQF  301 (345)
T ss_dssp             TTTCCHHHHHTCC--CCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHH
T ss_pred             ccccCHHHhcCCC--CCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHH
Confidence            9999999997554  79999999999999999999999954221111 111111101111         12688999999


Q ss_pred             HHHHhcCCCCCCCChhhhhc
Q 041080          210 ILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       210 i~~~l~~~p~~Rps~~~il~  229 (247)
                      +.+||..+|.+|||++++++
T Consensus       302 i~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          302 LVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhhcCcccCCCHHHHHH
Confidence            99999999999999999976


No 232
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=3.7e-41  Score=291.87  Aligned_cols=221  Identities=29%  Similarity=0.487  Sum_probs=188.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhc--CCCHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKY--HLSDSQ   79 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~   79 (247)
                      +..||||.+...    ......+.+.+|+.++++++||||+++++++. ++..++||||+++++|.+++...  .+++..
T Consensus       418 ~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~  492 (656)
T 2j0j_A          418 AMAVAIKTCKNC----TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLAS  492 (656)
T ss_dssp             CEEEEEEECSST----TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHH
T ss_pred             cEEEEEEEeccc----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHH
Confidence            346888887542    33455678999999999999999999999985 45689999999999999999765  488999


Q ss_pred             HHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---ccCCCCCCccCCcccccCCCCCC
Q 041080           80 VSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---KSCKGTPFWMAPEVVNSKNDGYG  156 (247)
Q Consensus        80 ~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~  156 (247)
                      ++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........   ....++..|+|||.+.+..  ++
T Consensus       493 ~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~  570 (656)
T 2j0j_A          493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR--FT  570 (656)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCC--CC
T ss_pred             HHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCC--CC
Confidence            999999999999999999999999999999999999999999999876543321   1233567899999996554  78


Q ss_pred             cchhHHHHHHHHHHHHh-CCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          157 LTADIWSLGCTVLEMLT-RRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       157 ~~~Di~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      .++||||||+++|+|++ |..||......+....+........+..+++.+.+++.+||..+|.+|||+.++++
T Consensus       571 ~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999997 99999988888888777777777788899999999999999999999999999975


No 233
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=6.2e-41  Score=265.12  Aligned_cols=219  Identities=21%  Similarity=0.267  Sum_probs=175.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeecee-eecCCcEEEEEeccccCcHHHHHHh--cCCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGT-DKDENRLYIFLELVTKGSLANLYQK--YHLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~   77 (247)
                      +|+.||||++......       +.+.+|+.+++.++|+++++.+.. ...++..++||||+ +++|.+++..  ..+++
T Consensus        33 ~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~  104 (296)
T 3uzp_A           33 AGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSL  104 (296)
T ss_dssp             TTEEEEEEEEESCSSC-------CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCH
T ss_pred             CCcEEEEEEecCCcch-------hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCH
Confidence            4789999998754321       247799999999998776665555 46677889999999 8899999974  45999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE---cCCCCeEEcccccccccCccc---------cccCCCCCCccCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILV---DASGSVKLADFGLAKATTMND---------LKSCKGTPFWMAP  145 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~---~~~~~~~l~df~~~~~~~~~~---------~~~~~~~~~~~aP  145 (247)
                      ..++.++.|++.||.+||++|++|+||||+||++   +.++.++|+|||.+.......         .....+++.|+||
T Consensus       105 ~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 3uzp_A          105 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCCh
Confidence            9999999999999999999999999999999999   488899999999986544332         2345689999999


Q ss_pred             cccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChh---hHHHHHh----hcCCCCCCCCcCCHHHHHHHHHHhcCCC
Q 041080          146 EVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEG---VQALFRI----GKGELPSVPSSLSRDARDFILKCLQVNP  218 (247)
Q Consensus       146 E~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (247)
                      |.+.+..  ++.++||||||+++|+|++|..||.....   ......+    .....+.....+|+++.+++.+||+.+|
T Consensus       185 E~~~~~~--~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  262 (296)
T 3uzp_A          185 NTHLGIE--QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRF  262 (296)
T ss_dssp             HHHTTCC--CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCT
T ss_pred             hhhcCCC--CCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCc
Confidence            9996554  78999999999999999999999976432   1112111    1111222336789999999999999999


Q ss_pred             CCCCChhhhhc
Q 041080          219 NDRPTVTELME  229 (247)
Q Consensus       219 ~~Rps~~~il~  229 (247)
                      .+|||++++++
T Consensus       263 ~~Rps~~~l~~  273 (296)
T 3uzp_A          263 DDKPDYSYLRQ  273 (296)
T ss_dssp             TCCCCHHHHHH
T ss_pred             CcCCCHHHHHH
Confidence            99999999876


No 234
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=2.2e-41  Score=268.33  Aligned_cols=221  Identities=26%  Similarity=0.417  Sum_probs=171.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhh--cCCCceeeeceeeec----CCcEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQ--FEQDNIVQYLGTDKD----ENRLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++...        ....+..|..++..  ++||||+++++++..    ....++||||+++++|.++++...
T Consensus        30 ~~~~vavK~~~~~--------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  101 (301)
T 3q4u_A           30 QGENVAVKIFSSR--------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT  101 (301)
T ss_dssp             TTEEEEEEEECGG--------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCC
T ss_pred             CCEEEEEEEeccc--------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcc
Confidence            4789999998542        12334456666655  799999999998543    356899999999999999998888


Q ss_pred             CCHHHHHHHHHHHHHHHHHhh--------hCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc------cccCCCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLH--------ERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND------LKSCKGTP  140 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh--------~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~  140 (247)
                      +++..++.++.|++.||.|||        +.|++|+||||+||+++.++.++|+|||.+.......      .....|++
T Consensus       102 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~  181 (301)
T 3q4u_A          102 LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK  181 (301)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCG
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccccccc
Confidence            999999999999999999999        9999999999999999999999999999985433222      22346899


Q ss_pred             CccCCcccccCCC----CCCcchhHHHHHHHHHHHHhC----------CCCCCCChh----hHHHHH-h-hcCCCCCCC-
Q 041080          141 FWMAPEVVNSKND----GYGLTADIWSLGCTVLEMLTR----------RPPYSHLEG----VQALFR-I-GKGELPSVP-  199 (247)
Q Consensus       141 ~~~aPE~~~~~~~----~~~~~~Di~slG~ll~~l~~g----------~~p~~~~~~----~~~~~~-~-~~~~~~~~~-  199 (247)
                      .|+|||.+.+...    .++.++||||||+++|+|++|          ..||.....    ...... . .....+..+ 
T Consensus       182 ~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (301)
T 3q4u_A          182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN  261 (301)
T ss_dssp             GGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred             ceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCCh
Confidence            9999999865432    234689999999999999999          788754321    111211 1 112222333 


Q ss_pred             ----CcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          200 ----SSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       200 ----~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                          ...++++.+++.+||+.+|.+|||++++++
T Consensus       262 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          262 RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                235678999999999999999999999985


No 235
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.2e-41  Score=276.84  Aligned_cols=225  Identities=18%  Similarity=0.244  Sum_probs=172.9

Q ss_pred             CceEEEEEEeecCCCccc------hHHHHHHHHHHHHHhhcCCCceeeeceeeecC----CcEEEEEeccccCcHHHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQG------KQSILQLEQEISLLSQFEQDNIVQYLGTDKDE----NRLYIFLELVTKGSLANLYQ   71 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~   71 (247)
                      |+.||||++.........      ......+..|+..++.++||||+++++++...    ...++||||+ +++|.++++
T Consensus        65 ~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~  143 (364)
T 3op5_A           65 DAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYE  143 (364)
T ss_dssp             TCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHH
T ss_pred             ccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHH
Confidence            578999998754311000      00011233466677788999999999998764    4589999999 889999997


Q ss_pred             hc--CCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEc--CCCCeEEcccccccccCccc---------cccCCC
Q 041080           72 KY--HLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVD--ASGSVKLADFGLAKATTMND---------LKSCKG  138 (247)
Q Consensus        72 ~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~--~~~~~~l~df~~~~~~~~~~---------~~~~~~  138 (247)
                      ..  .+++..++.++.|++.||.|||+.||+|+||||+||+++  .++.++|+|||++.......         .....|
T Consensus       144 ~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~g  223 (364)
T 3op5_A          144 ANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDG  223 (364)
T ss_dssp             HTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCC
T ss_pred             hccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCC
Confidence            74  499999999999999999999999999999999999999  88999999999986543221         123348


Q ss_pred             CCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHH-hhc---CCCC------CCCCcCCHHHHH
Q 041080          139 TPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFR-IGK---GELP------SVPSSLSRDARD  208 (247)
Q Consensus       139 ~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~-~~~---~~~~------~~~~~~~~~~~~  208 (247)
                      ++.|+|||.+.+..  ++.++||||||+++|+|++|..||........... ...   ...+      .....+|+++.+
T Consensus       224 t~~y~aPE~~~~~~--~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (364)
T 3op5_A          224 TIEFTSIDAHNGVA--PSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAK  301 (364)
T ss_dssp             CTTTCCHHHHTTCC--CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHH
T ss_pred             CCCccCHHHhCCCC--CCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHH
Confidence            99999999996554  79999999999999999999999975322221111 000   0000      012467899999


Q ss_pred             HHHHHhcCCCCCCCChhhhhc
Q 041080          209 FILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       209 li~~~l~~~p~~Rps~~~il~  229 (247)
                      ++..||..+|.+||+++++++
T Consensus       302 li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          302 YMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhcCCCCCCCCHHHHHH
Confidence            999999999999999999875


No 236
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=9.5e-42  Score=280.29  Aligned_cols=225  Identities=24%  Similarity=0.402  Sum_probs=179.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCC--cEEEEEeccccCcHHHHHHhcC----
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDEN--RLYIFLELVTKGSLANLYQKYH----   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~----   74 (247)
                      +|+.||||++.....    ....+.+.+|+.++++++||||+++++++...+  ..++||||+++++|.++++...    
T Consensus        33 ~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~  108 (396)
T 4eut_A           33 TGDLFAIKVFNNISF----LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG  108 (396)
T ss_dssp             TCCEEEEEEECGGGG----GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTC
T ss_pred             CCcEEEEEEeccccc----cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccC
Confidence            488999999975322    223556779999999999999999999987655  7899999999999999987542    


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE----cCCCCeEEcccccccccCccc-cccCCCCCCccCCcccc
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILV----DASGSVKLADFGLAKATTMND-LKSCKGTPFWMAPEVVN  149 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~----~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~aPE~~~  149 (247)
                      +++..++.++.|++.||.|||+.|++|+||||+||++    +.++.++|+|||.+....... .....|+..|+|||.+.
T Consensus       109 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (396)
T 4eut_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE  188 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhh
Confidence            8999999999999999999999999999999999999    777789999999987654333 33456899999999985


Q ss_pred             cCC------CCCCcchhHHHHHHHHHHHHhCCCCCCCCh----hhHHHHHhhcCCCC-----------------------
Q 041080          150 SKN------DGYGLTADIWSLGCTVLEMLTRRPPYSHLE----GVQALFRIGKGELP-----------------------  196 (247)
Q Consensus       150 ~~~------~~~~~~~Di~slG~ll~~l~~g~~p~~~~~----~~~~~~~~~~~~~~-----------------------  196 (247)
                      +..      ..++.++|+||||+++|+|++|..||....    .......+..+..+                       
T Consensus       189 ~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  268 (396)
T 4eut_A          189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVS  268 (396)
T ss_dssp             HHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTT
T ss_pred             ccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcc
Confidence            421      225778999999999999999999986432    22333333322211                       


Q ss_pred             -CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          197 -SVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       197 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                       .+...++..+.+++.+||+.||.+|||++++++
T Consensus       269 ~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          269 CSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             cccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence             112345678899999999999999999999865


No 237
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.1e-40  Score=263.68  Aligned_cols=219  Identities=21%  Similarity=0.261  Sum_probs=174.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeecee-eecCCcEEEEEeccccCcHHHHHHh--cCCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGT-DKDENRLYIFLELVTKGSLANLYQK--YHLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~   77 (247)
                      +|+.||||++......       ..+.+|+.+++.++|++++..+.. +...+..++||||+ +++|.+++..  ..+++
T Consensus        33 ~~~~vavK~~~~~~~~-------~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~  104 (296)
T 4hgt_A           33 AGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSL  104 (296)
T ss_dssp             TTEEEEEEEEEC---C-------CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCH
T ss_pred             CCceEEEEeecccccc-------hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCH
Confidence            4789999987654321       236789999999998777666655 46778889999999 8899999974  45999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE---cCCCCeEEcccccccccCccc---------cccCCCCCCccCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILV---DASGSVKLADFGLAKATTMND---------LKSCKGTPFWMAP  145 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~---~~~~~~~l~df~~~~~~~~~~---------~~~~~~~~~~~aP  145 (247)
                      ..++.++.|++.||.+||++|++|+||||+||++   +.++.++|+|||.+.......         .....+++.|+||
T Consensus       105 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  184 (296)
T 4hgt_A          105 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI  184 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccch
Confidence            9999999999999999999999999999999999   788999999999986544322         2244588999999


Q ss_pred             cccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhh---HHHHH----hhcCCCCCCCCcCCHHHHHHHHHHhcCCC
Q 041080          146 EVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGV---QALFR----IGKGELPSVPSSLSRDARDFILKCLQVNP  218 (247)
Q Consensus       146 E~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (247)
                      |.+.+..  ++.++||||||+++|++++|..||......   .....    ......+.....+|+++.+++.+||+.+|
T Consensus       185 E~~~~~~--~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  262 (296)
T 4hgt_A          185 NTHLGIE--QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRF  262 (296)
T ss_dssp             HHHTTCC--CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCT
T ss_pred             HHhcCCC--CCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCC
Confidence            9996554  789999999999999999999999764322   11111    11111122335679999999999999999


Q ss_pred             CCCCChhhhhc
Q 041080          219 NDRPTVTELME  229 (247)
Q Consensus       219 ~~Rps~~~il~  229 (247)
                      .+|||++++++
T Consensus       263 ~~Rpt~~~l~~  273 (296)
T 4hgt_A          263 DDKPDYSYLRQ  273 (296)
T ss_dssp             TCCCCHHHHHH
T ss_pred             CCCCCHHHHHH
Confidence            99999999986


No 238
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.2e-41  Score=273.19  Aligned_cols=215  Identities=18%  Similarity=0.238  Sum_probs=173.1

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceee---------------eceeeec-CCcEEEEEeccccCc
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQ---------------YLGTDKD-ENRLYIFLELVTKGS   65 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~---------------~~~~~~~-~~~~~lv~e~~~~~~   65 (247)
                      |+.||||++...          +.+.+|+.++++++||||++               +++++.. ++..++||||+ +++
T Consensus        75 ~~~vavK~~~~~----------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~  143 (352)
T 2jii_A           75 KQKFSLKLDAKD----------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRS  143 (352)
T ss_dssp             --CEEEEEEETT----------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEE
T ss_pred             CceEEEEEeccc----------chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcC
Confidence            789999998743          24779999999999999988               5566655 67889999999 889


Q ss_pred             HHHHHHh---cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC--CeEEcccccccccCccc--------
Q 041080           66 LANLYQK---YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG--SVKLADFGLAKATTMND--------  132 (247)
Q Consensus        66 L~~~l~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~--~~~l~df~~~~~~~~~~--------  132 (247)
                      |.+++..   ..+++..++.++.|++.||.|||++|++|+||||+||+++.++  .++|+|||.+.......        
T Consensus       144 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  223 (352)
T 2jii_A          144 LQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEG  223 (352)
T ss_dssp             HHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTT
T ss_pred             HHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccccccc
Confidence            9999986   4599999999999999999999999999999999999999998  89999999996544322        


Q ss_pred             -cccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCh-hhHHH-HHhh--cCCCCCCC------Cc
Q 041080          133 -LKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLE-GVQAL-FRIG--KGELPSVP------SS  201 (247)
Q Consensus       133 -~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~-~~~~~-~~~~--~~~~~~~~------~~  201 (247)
                       .....+++.|+|||.+.+..  ++.++||||||+++|+|++|..||.... ..... ....  ......+.      ..
T Consensus       224 ~~~~~~gt~~y~aPE~~~~~~--~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (352)
T 2jii_A          224 SRSPHEGDLEFISMDLHKGCG--PSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIR  301 (352)
T ss_dssp             SSCTTCSCTTTCCHHHHTTCC--CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEEC
T ss_pred             ccccccCCccccCHHHHccCC--CCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCC
Confidence             12346889999999996544  7899999999999999999999997653 11111 1111  11111111      25


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          202 LSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       202 ~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      +++++.+++.+||..+|.+|||++++++
T Consensus       302 ~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          302 PSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             CCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            6899999999999999999999999976


No 239
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-40  Score=267.97  Aligned_cols=221  Identities=26%  Similarity=0.393  Sum_probs=170.2

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhh--cCCCceeeeceeeecC----CcEEEEEeccccCcHHHHHHhcCC
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQ--FEQDNIVQYLGTDKDE----NRLYIFLELVTKGSLANLYQKYHL   75 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~   75 (247)
                      |+.||||++....        ......|..++..  ++||||+++++++...    ...++||||+++++|.++++...+
T Consensus        60 ~~~vavK~~~~~~--------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~  131 (337)
T 3mdy_A           60 GEKVAVKVFFTTE--------EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTL  131 (337)
T ss_dssp             TEEEEEEEEEGGG--------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCB
T ss_pred             CceEEEEEEeccc--------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCC
Confidence            7889999986421        1223344555544  4899999999998877    789999999999999999999899


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhC--------CeeecCCCCCcEEEcCCCCeEEcccccccccCcccc------ccCCCCCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHER--------NVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL------KSCKGTPF  141 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~--------~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~------~~~~~~~~  141 (247)
                      ++..++.++.|++.||.+||+.        |++|+||||+||+++.++.++|+|||.+........      ....|++.
T Consensus       132 ~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~  211 (337)
T 3mdy_A          132 DAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKR  211 (337)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcc
Confidence            9999999999999999999998        999999999999999999999999999864433221      24468999


Q ss_pred             ccCCcccccCCCCCC----cchhHHHHHHHHHHHHhC----------CCCCCCChh-----hHHHHHhh-cCCCCCCCC-
Q 041080          142 WMAPEVVNSKNDGYG----LTADIWSLGCTVLEMLTR----------RPPYSHLEG-----VQALFRIG-KGELPSVPS-  200 (247)
Q Consensus       142 ~~aPE~~~~~~~~~~----~~~Di~slG~ll~~l~~g----------~~p~~~~~~-----~~~~~~~~-~~~~~~~~~-  200 (247)
                      |+|||.+.+......    .++||||||+++|+|++|          ..||.....     ........ ....+..+. 
T Consensus       212 y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (337)
T 3mdy_A          212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR  291 (337)
T ss_dssp             GCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG
T ss_pred             eeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccccc
Confidence            999999865442211    249999999999999999          667654321     11111111 122233332 


Q ss_pred             ----cCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          201 ----SLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       201 ----~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                          .+++++.+++.+||+.+|.+|||+++++++
T Consensus       292 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          292 WSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                566789999999999999999999999874


No 240
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.4e-41  Score=271.61  Aligned_cols=223  Identities=22%  Similarity=0.467  Sum_probs=183.4

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC--CCHHHH
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH--LSDSQV   80 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~   80 (247)
                      ..+|+|++.......   ...+.+.+|+.++++++||||+++++++.+.+..+++|||+++++|.+++...+  +++..+
T Consensus        56 ~~~avk~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~  132 (319)
T 2y4i_B           56 GEVAIRLIDIERDNE---DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKT  132 (319)
T ss_dssp             SSEEEEECCCCSCCC---CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHH
T ss_pred             CeEEEEEeecCCCCH---HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHH
Confidence            468999987653222   223346789999999999999999999999999999999999999999997654  899999


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCc-------cccccCCCCCCccCCcccccC--
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTM-------NDLKSCKGTPFWMAPEVVNSK--  151 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~--  151 (247)
                      +.++.|++.||.+||+.|++|+||||+||+++ ++.++|+|||.+.....       .......++..|+|||.+.+.  
T Consensus       133 ~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  211 (319)
T 2y4i_B          133 RQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP  211 (319)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSC
T ss_pred             HHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccc
Confidence            99999999999999999999999999999997 78999999998754321       112233477889999998642  


Q ss_pred             -----CCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCC-CcCCHHHHHHHHHHhcCCCCCCCChh
Q 041080          152 -----NDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVP-SSLSRDARDFILKCLQVNPNDRPTVT  225 (247)
Q Consensus       152 -----~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rps~~  225 (247)
                           ...++.++||||||+++|+|++|..||...........+.....+... ..++.++.+++.+||..+|.+|||++
T Consensus       212 ~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  291 (319)
T 2y4i_B          212 DTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFT  291 (319)
T ss_dssp             C--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHH
T ss_pred             cccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHH
Confidence                 233688999999999999999999999988877777666665554443 46889999999999999999999999


Q ss_pred             hhhc
Q 041080          226 ELME  229 (247)
Q Consensus       226 ~il~  229 (247)
                      ++++
T Consensus       292 ~l~~  295 (319)
T 2y4i_B          292 KLMD  295 (319)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986


No 241
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=268.09  Aligned_cols=222  Identities=24%  Similarity=0.391  Sum_probs=162.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeee--------cCCcEEEEEeccccCcHHHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDK--------DENRLYIFLELVTKGSLANLYQ   71 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~--------~~~~~~lv~e~~~~~~L~~~l~   71 (247)
                      +|+.||||++...     .....+.+.+|+.++.++. ||||+++++++.        .....+++|||+.| +|.+++.
T Consensus        52 ~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~  125 (337)
T 3ll6_A           52 SGREYALKRLLSN-----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLK  125 (337)
T ss_dssp             TCCEEEEEEEEES-----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHH
T ss_pred             CCcEEEEEEecCC-----chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCC-CHHHHHH
Confidence            4789999998643     3455667889999999996 999999999883        34468999999975 8988875


Q ss_pred             h----cCCCHHHHHHHHHHHHHHHHHhhhCC--eeecCCCCCcEEEcCCCCeEEcccccccccCcccc------------
Q 041080           72 K----YHLSDSQVSSYTRQILNGLVYLHERN--VVHRDIKCANILVDASGSVKLADFGLAKATTMNDL------------  133 (247)
Q Consensus        72 ~----~~~~~~~~~~~~~~l~~~l~~lh~~~--i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~------------  133 (247)
                      .    ..+++..++.++.|++.||.+||+.|  ++|+||||+||+++.++.++|+|||.+........            
T Consensus       126 ~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  205 (337)
T 3ll6_A          126 KMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE  205 (337)
T ss_dssp             HHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------
T ss_pred             HhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccch
Confidence            4    34999999999999999999999999  99999999999999999999999999875543221            


Q ss_pred             --ccCCCCCCccCCccccc-CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHH
Q 041080          134 --KSCKGTPFWMAPEVVNS-KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFI  210 (247)
Q Consensus       134 --~~~~~~~~~~aPE~~~~-~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  210 (247)
                        ....+++.|+|||.+.. ....++.++||||||+++|+|++|..||............   .....+...+..+.+++
T Consensus       206 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li  282 (337)
T 3ll6_A          206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK---YSIPPHDTQYTVFHSLI  282 (337)
T ss_dssp             ------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------CCCCTTCCSSGGGHHHH
T ss_pred             hhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc---ccCCcccccchHHHHHH
Confidence              13347889999999832 2333788999999999999999999999765443332221   12233456778899999


Q ss_pred             HHHhcCCCCCCCChhhhhcCc
Q 041080          211 LKCLQVNPNDRPTVTELMEHP  231 (247)
Q Consensus       211 ~~~l~~~p~~Rps~~~il~~p  231 (247)
                      .+||+.+|.+|||+++++++-
T Consensus       283 ~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          283 RAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             HHHSCSSGGGSCCHHHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHHHH
Confidence            999999999999999999864


No 242
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=1.5e-40  Score=268.05  Aligned_cols=222  Identities=25%  Similarity=0.372  Sum_probs=177.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhh--cCCCceeeeceeeecCC----cEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQ--FEQDNIVQYLGTDKDEN----RLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++...        ....+.+|+.++..  ++||||+++++++....    ..++||||+++++|.+++++..
T Consensus        64 ~~~~vavK~~~~~--------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  135 (342)
T 1b6c_B           64 RGEEVAVKIFSSR--------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT  135 (342)
T ss_dssp             TTEEEEEEEECGG--------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCC
T ss_pred             cCccEEEEEeCch--------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhccC
Confidence            4789999998532        23456688888887  68999999999988776    8999999999999999999989


Q ss_pred             CCHHHHHHHHHHHHHHHHHhh--------hCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc------cccCCCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLH--------ERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND------LKSCKGTP  140 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh--------~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~------~~~~~~~~  140 (247)
                      +++..++.++.|++.||.+||        +.|++|+||||+||+++.++.++|+|||.+.......      .....++.
T Consensus       136 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~  215 (342)
T 1b6c_B          136 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK  215 (342)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCc
Confidence            999999999999999999999        8999999999999999999999999999986543322      23446899


Q ss_pred             CccCCcccccCCCC----CCcchhHHHHHHHHHHHHhC----------CCCCCCChh-----hHHHHHhhcC-CCCCCCC
Q 041080          141 FWMAPEVVNSKNDG----YGLTADIWSLGCTVLEMLTR----------RPPYSHLEG-----VQALFRIGKG-ELPSVPS  200 (247)
Q Consensus       141 ~~~aPE~~~~~~~~----~~~~~Di~slG~ll~~l~~g----------~~p~~~~~~-----~~~~~~~~~~-~~~~~~~  200 (247)
                      .|+|||.+.+....    ++.++||||||+++|+|++|          ..||.....     ......+... ..+..+.
T Consensus       216 ~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (342)
T 1b6c_B          216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN  295 (342)
T ss_dssp             GGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred             ccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcc
Confidence            99999998654321    23689999999999999999          778865422     2222222222 2233332


Q ss_pred             -----cCCHHHHHHHHHHhcCCCCCCCChhhhhcC
Q 041080          201 -----SLSRDARDFILKCLQVNPNDRPTVTELMEH  230 (247)
Q Consensus       201 -----~~~~~~~~li~~~l~~~p~~Rps~~~il~~  230 (247)
                           ..++.+.+++.+||+.+|.+|||+++++++
T Consensus       296 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          296 RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                 345689999999999999999999999874


No 243
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=8.4e-41  Score=268.97  Aligned_cols=234  Identities=24%  Similarity=0.325  Sum_probs=170.6

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeee-----cCCcEEEEEeccccCcHHHHHHhcCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDK-----DENRLYIFLELVTKGSLANLYQKYHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~   75 (247)
                      +|+.||||++....      ........++..+..++||||+++++.+.     ....+++||||+++++|.++++....
T Consensus        35 ~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~  108 (336)
T 3g2f_A           35 DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS  108 (336)
T ss_dssp             TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCB
T ss_pred             CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhccc
Confidence            47899999996432      11112234555555689999999997543     23467899999999999999999889


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhC---------CeeecCCCCCcEEEcCCCCeEEcccccccccCcc----------ccccC
Q 041080           76 SDSQVSSYTRQILNGLVYLHER---------NVVHRDIKCANILVDASGSVKLADFGLAKATTMN----------DLKSC  136 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~---------~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~----------~~~~~  136 (247)
                      ++..++.++.|++.||.|||+.         |++|+||||+||+++.++.++|+|||.+......          .....
T Consensus       109 ~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~  188 (336)
T 3g2f_A          109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE  188 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCT
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccC
Confidence            9999999999999999999999         9999999999999999999999999998654322          12234


Q ss_pred             CCCCCccCCcccccCC-----CCCCcchhHHHHHHHHHHHHhCCCCCCCChh------------------hHHHHH-hhc
Q 041080          137 KGTPFWMAPEVVNSKN-----DGYGLTADIWSLGCTVLEMLTRRPPYSHLEG------------------VQALFR-IGK  192 (247)
Q Consensus       137 ~~~~~~~aPE~~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~------------------~~~~~~-~~~  192 (247)
                      .|+..|+|||.+.+..     ..++.++||||||+++|+|++|..|+.....                  ...... ...
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
T 3g2f_A          189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSRE  268 (336)
T ss_dssp             TSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS
T ss_pred             CCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhccc
Confidence            5899999999986521     1245789999999999999999766422111                  001111 111


Q ss_pred             CCCCCCCCc------CCHHHHHHHHHHhcCCCCCCCChhhhh------cCccCCCCCCCC
Q 041080          193 GELPSVPSS------LSRDARDFILKCLQVNPNDRPTVTELM------EHPFVKRPLQTP  240 (247)
Q Consensus       193 ~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~~il------~~p~~~~~~~~~  240 (247)
                      ...+.++..      .++++.++|.+||+.+|.+|||+++++      -++|-+...+.+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~~~~  328 (336)
T 3g2f_A          269 KQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSP  328 (336)
T ss_dssp             CCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC------
T ss_pred             ccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcccCCC
Confidence            122333332      445899999999999999999999995      477877665544


No 244
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.5e-39  Score=272.32  Aligned_cols=219  Identities=21%  Similarity=0.262  Sum_probs=176.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCC-CceeeeceeeecCCcEEEEEeccccCcHHHHHHh--cCCCH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQ-DNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK--YHLSD   77 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~   77 (247)
                      +|+.||||++......       ..+.+|+.+++.+.| +++..+..++...+..++||||+ +++|.++++.  ..+++
T Consensus        31 ~~~~vAvK~~~~~~~~-------~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~  102 (483)
T 3sv0_A           31 TNEEVAIKLENVKTKH-------PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSL  102 (483)
T ss_dssp             TCCEEEEEEEETTCSS-------CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCH
T ss_pred             CCcEEEEEEecccccc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCH
Confidence            4789999988654321       136789999999976 56666666777888999999999 8899999974  46999


Q ss_pred             HHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEE---cCCCCeEEcccccccccCccc---------cccCCCCCCccCC
Q 041080           78 SQVSSYTRQILNGLVYLHERNVVHRDIKCANILV---DASGSVKLADFGLAKATTMND---------LKSCKGTPFWMAP  145 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~---~~~~~~~l~df~~~~~~~~~~---------~~~~~~~~~~~aP  145 (247)
                      ..++.++.||+.||.|||++||+|+||||+||++   +.++.++|+|||++.......         .....|+..|+||
T Consensus       103 ~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP  182 (483)
T 3sv0_A          103 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASV  182 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCH
Confidence            9999999999999999999999999999999999   588999999999986544322         1245689999999


Q ss_pred             cccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhH---HHHHh----hcCCCCCCCCcCCHHHHHHHHHHhcCCC
Q 041080          146 EVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQ---ALFRI----GKGELPSVPSSLSRDARDFILKCLQVNP  218 (247)
Q Consensus       146 E~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p  218 (247)
                      |.+.+..  ++.++||||||+++|+|++|..||.......   ....+    .......+...+++++.+++.+||..+|
T Consensus       183 E~~~~~~--~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP  260 (483)
T 3sv0_A          183 NTHLGIE--QSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRF  260 (483)
T ss_dssp             HHHTTCC--CCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCT
T ss_pred             HHhcCCC--CChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCCh
Confidence            9996554  7999999999999999999999997654321   11111    1112222335779999999999999999


Q ss_pred             CCCCChhhhhc
Q 041080          219 NDRPTVTELME  229 (247)
Q Consensus       219 ~~Rps~~~il~  229 (247)
                      .+||+++++++
T Consensus       261 ~~RPs~~el~~  271 (483)
T 3sv0_A          261 DDKPDYSYLKR  271 (483)
T ss_dssp             TCCCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999998875


No 245
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.5e-40  Score=268.29  Aligned_cols=214  Identities=17%  Similarity=0.195  Sum_probs=172.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC---CCceeeeceeeecCCcEEEEEeccccCcHHHHHHh-----
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE---QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQK-----   72 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----   72 (247)
                      +|+.||||++....        ...+..|+.++..++   |+||+++++++...+..++||||+++|+|.++++.     
T Consensus        94 ~~~~vavK~~~~~~--------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~  165 (365)
T 3e7e_A           94 NKQKFVLKVQKPAN--------PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTP  165 (365)
T ss_dssp             CCCCEEEEEESSCC--------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTST
T ss_pred             cCcEEEEEEeCCCC--------hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhccc
Confidence            47899999986431        234667777777776   89999999999999999999999999999999964     


Q ss_pred             -cCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcC-----------CCCeEEcccccccccC----ccccccC
Q 041080           73 -YHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDA-----------SGSVKLADFGLAKATT----MNDLKSC  136 (247)
Q Consensus        73 -~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~-----------~~~~~l~df~~~~~~~----~~~~~~~  136 (247)
                       ..+++..++.++.|++.||.|||+.||+|+||||+||+++.           ++.++|+|||++....    .......
T Consensus       166 ~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  245 (365)
T 3e7e_A          166 EKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK  245 (365)
T ss_dssp             TCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCS
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeee
Confidence             35999999999999999999999999999999999999998           8999999999995432    2233456


Q ss_pred             CCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcC
Q 041080          137 KGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQV  216 (247)
Q Consensus       137 ~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  216 (247)
                      .|++.|+|||.+.+..  ++.++||||||+++|+|++|..||.........   .......  ...++.+.+++..||+.
T Consensus       246 ~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~l~~  318 (365)
T 3e7e_A          246 CETSGFQCVEMLSNKP--WNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK---PEGLFRR--LPHLDMWNEFFHVMLNI  318 (365)
T ss_dssp             SCTTSCCCHHHHTTCC--BSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---ECSCCTT--CSSHHHHHHHHHHHHCC
T ss_pred             cCCCCCCChHHhcCCC--CCccccHHHHHHHHHHHHhCCCccccCCCCcee---echhccc--cCcHHHHHHHHHHHcCC
Confidence            6899999999997654  799999999999999999999998544322111   1111111  13477899999999999


Q ss_pred             CCCCCCChhhhhc
Q 041080          217 NPNDRPTVTELME  229 (247)
Q Consensus       217 ~p~~Rps~~~il~  229 (247)
                      +|.+|++..+.+.
T Consensus       319 ~p~~r~~~~~~l~  331 (365)
T 3e7e_A          319 PDCHHLPSLDLLR  331 (365)
T ss_dssp             CCTTCCCCHHHHH
T ss_pred             CCCCcchHHHHHH
Confidence            9999966544443


No 246
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1e-40  Score=275.39  Aligned_cols=226  Identities=19%  Similarity=0.214  Sum_probs=171.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCC-Cceee---------------------eceeeec-----CCc
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQ-DNIVQ---------------------YLGTDKD-----ENR   53 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~---------------------~~~~~~~-----~~~   53 (247)
                      +|+.||||++.....  ......+.+.+|+.+++.+.| ++...                     +..++..     ...
T Consensus       102 ~g~~vAvK~~~~~~~--~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (413)
T 3dzo_A          102 TGESFEVHVPYFTER--PPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLS  179 (413)
T ss_dssp             TCCEEEEEEECCSCC------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCS
T ss_pred             CCCceEEEEEecCCC--ccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccc
Confidence            588999999874332  233446678899999999977 22211                     1111111     224


Q ss_pred             EEEEEeccccCcHHHHHH--------hcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccc
Q 041080           54 LYIFLELVTKGSLANLYQ--------KYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLA  125 (247)
Q Consensus        54 ~~lv~e~~~~~~L~~~l~--------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~  125 (247)
                      ++++|+.+. ++|.++++        ...+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++
T Consensus       180 ~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a  258 (413)
T 3dzo_A          180 RFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL  258 (413)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             eEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccce
Confidence            678888774 59998885        223778889999999999999999999999999999999999999999999998


Q ss_pred             cccCccccccCCCCCCccCCccccc--------CCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCC
Q 041080          126 KATTMNDLKSCKGTPFWMAPEVVNS--------KNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPS  197 (247)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  197 (247)
                      ...... .....| +.|+|||.+..        ....++.++||||||+++|+|++|+.||...........+...    
T Consensus       259 ~~~~~~-~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~----  332 (413)
T 3dzo_A          259 VRDGAS-AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRS----  332 (413)
T ss_dssp             EETTEE-ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSS----
T ss_pred             eecCCc-cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhh----
Confidence            765544 344456 99999999832        1222678999999999999999999999876654433333221    


Q ss_pred             CCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCCCC
Q 041080          198 VPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRP  236 (247)
Q Consensus       198 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~~~  236 (247)
                       ...+|++++++|.+||+.+|.+|||+.++++||||+..
T Consensus       333 -~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          333 -CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             -CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             -cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence             23678999999999999999999999999999999753


No 247
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=1e-41  Score=270.46  Aligned_cols=221  Identities=25%  Similarity=0.376  Sum_probs=162.3

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhh--cCCCceeeeceeeecCC----cEEEEEeccccCcHHHHHHhcC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQ--FEQDNIVQYLGTDKDEN----RLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +|+.||||++...        ....+.+|..++..  ++||||+++++++....    ..++||||+++++|.+++++..
T Consensus        25 ~~~~vavK~~~~~--------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~   96 (303)
T 3gxj_A           25 RGEEVAVKIFSSR--------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT   96 (303)
T ss_dssp             TTSCEEEEECC-T--------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHHHHCC
T ss_pred             cCcceEEEEeccc--------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHHhccC
Confidence            3788999998532        12345677778777  78999999999988776    7899999999999999999988


Q ss_pred             CCHHHHHHHHHHHHHHHHHhh--------hCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc------ccCCCCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLH--------ERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL------KSCKGTP  140 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh--------~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~------~~~~~~~  140 (247)
                      +++..++.++.|++.||.+||        +.|++|+||||+||+++.++.++|+|||.+........      ....|++
T Consensus        97 ~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~  176 (303)
T 3gxj_A           97 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK  176 (303)
T ss_dssp             BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTTEESCC-----CCG
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCcccccccCCCCcCc
Confidence            999999999999999999999        99999999999999999999999999999864433221      2235899


Q ss_pred             CccCCcccccCCC----CCCcchhHHHHHHHHHHHHhC----------CCCCCCChh-----hHHHHHhhc-CCCCCCCC
Q 041080          141 FWMAPEVVNSKND----GYGLTADIWSLGCTVLEMLTR----------RPPYSHLEG-----VQALFRIGK-GELPSVPS  200 (247)
Q Consensus       141 ~~~aPE~~~~~~~----~~~~~~Di~slG~ll~~l~~g----------~~p~~~~~~-----~~~~~~~~~-~~~~~~~~  200 (247)
                      .|+|||.+.+...    .++.++||||||+++|+|++|          ..||.....     ......... ...+..+.
T Consensus       177 ~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (303)
T 3gxj_A          177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN  256 (303)
T ss_dssp             GGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCG
T ss_pred             cccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccc
Confidence            9999999865432    133689999999999999999          677644321     111222221 22223332


Q ss_pred             -----cCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          201 -----SLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       201 -----~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                           ..++.+.+++.+||+.||.+|||++++++
T Consensus       257 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          257 RWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence                 33457999999999999999999999986


No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=8.7e-41  Score=268.99  Aligned_cols=223  Identities=17%  Similarity=0.216  Sum_probs=169.9

Q ss_pred             CCceEEEEEEeecCCC---ccchHHHHHHHHHHHHHhhcC--------------------------CCceeeeceeeec-
Q 041080            1 DGFFFAVKEVSLQDQG---AQGKQSILQLEQEISLLSQFE--------------------------QDNIVQYLGTDKD-   50 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~--------------------------h~~i~~~~~~~~~-   50 (247)
                      +|+.||||++......   .......+.+.+|+.+++.++                          ||||+++++++.+ 
T Consensus        42 ~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~  121 (336)
T 2vuw_A           42 DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNST  121 (336)
T ss_dssp             TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred             CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhh
Confidence            4789999999876432   122334567889999998886                          5555555555554 


Q ss_pred             ------------CCcEEEEEeccccCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHhh-hCCeeecCCCCCcEEEcCCC--
Q 041080           51 ------------ENRLYIFLELVTKGSLANLYQKYHLSDSQVSSYTRQILNGLVYLH-ERNVVHRDIKCANILVDASG--  115 (247)
Q Consensus        51 ------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~dl~~~ni~~~~~~--  115 (247)
                                  .+..++||||+++|++.+.+.+..+++..++.++.|++.||.||| +.||+|+||||+||+++.++  
T Consensus       122 ~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~  201 (336)
T 2vuw_A          122 KGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLK  201 (336)
T ss_dssp             TCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCS
T ss_pred             ccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCc
Confidence                        789999999999997666665667999999999999999999999 99999999999999999887  


Q ss_pred             ------------------CeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcchhHHHHHHH-HHHHHhCCC
Q 041080          116 ------------------SVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCT-VLEMLTRRP  176 (247)
Q Consensus       116 ------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~l-l~~l~~g~~  176 (247)
                                        .++|+|||++......   ...|++.|+|||.+.+..   +.++||||+|++ .++++.|..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~g~~---~~~~Diwsl~~~~~~~~~~g~~  275 (336)
T 2vuw_A          202 KLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFTGDG---DYQFDIYRLMKKENNNRWGEYH  275 (336)
T ss_dssp             EEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGCCCS---SHHHHHHHHHHHHHTTCTTSCC
T ss_pred             ceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhcCCC---ccceehhhhhCCCCcccccccC
Confidence                              8999999999755432   346899999999997543   779999998777 666778888


Q ss_pred             CCCCChh-hHHHHHhhcC-CC-----CCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhh-cCccCC
Q 041080          177 PYSHLEG-VQALFRIGKG-EL-----PSVPSSLSRDARDFILKCLQVNPNDRPTVTELM-EHPFVK  234 (247)
Q Consensus       177 p~~~~~~-~~~~~~~~~~-~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il-~~p~~~  234 (247)
                      ||..... ......+... ..     ...+..+++++++||.+||+.+     |++|++ +||||+
T Consensus       276 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          276 PYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             THHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             CCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            8754211 1111121111 11     1112357889999999999976     999999 999996


No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=2.7e-38  Score=248.82  Aligned_cols=198  Identities=16%  Similarity=0.120  Sum_probs=163.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      +|+.||||++.....  ......+.+.+|+..+.+++||||+++++++...+..++||||++|++|.++++. +.....+
T Consensus        55 ~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~  131 (286)
T 3uqc_A           55 LDRQVALTFVDPQGV--LPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT-SPSPVGA  131 (286)
T ss_dssp             TTEEEEEEESCTTCC--SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT-CCCHHHH
T ss_pred             CCceEEEEEECcccc--cCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc-CCChHHH
Confidence            478999999976432  2345667889999999999999999999999999999999999999999999965 4566678


Q ss_pred             HHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcchh
Q 041080           81 SSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTAD  160 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~D  160 (247)
                      ..++.|++.||.|||++|++|+||||+||+++.+|.++|++++.                  ++         .++.++|
T Consensus       132 ~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~------------------~~---------~~~~~~D  184 (286)
T 3uqc_A          132 IRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT------------------MP---------DANPQDD  184 (286)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC------------------CT---------TCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc------------------cC---------CCCchhH
Confidence            99999999999999999999999999999999999999985432                  22         2688999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCChhhHHHH---HhhcCCCC---CCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          161 IWSLGCTVLEMLTRRPPYSHLEGVQALF---RIGKGELP---SVPSSLSRDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       161 i~slG~ll~~l~~g~~p~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      |||||+++|+|++|..||..........   .......+   .....+++++.+++.+||+.||.+| |++++++
T Consensus       185 i~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          185 IRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence            9999999999999999998765433211   11111111   2235789999999999999999999 9999986


No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.4e-39  Score=283.90  Aligned_cols=216  Identities=22%  Similarity=0.263  Sum_probs=175.1

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCc-----EEEEEeccccCcHHHHHHhcCC
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENR-----LYIFLELVTKGSLANLYQKYHL   75 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-----~~lv~e~~~~~~L~~~l~~~~~   75 (247)
                      +|+.||||++...    ........+.+|+.++++++||||+++++++...+.     .++||||+++++|.+++.. .+
T Consensus       105 ~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~-~l  179 (681)
T 2pzi_A          105 NGRPVVLKGLVHS----GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-KL  179 (681)
T ss_dssp             TTEEEEEEESCSS----CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C-CC
T ss_pred             CCcEEEEEEeCcc----CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC-CC
Confidence            4789999988643    234556678899999999999999999999987665     7999999999999988766 79


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcccccCCCCC
Q 041080           76 SDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGY  155 (247)
Q Consensus        76 ~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  155 (247)
                      ++..++.++.|++.||.|||++||+|+||||+||+++.+ .++|+|||++......  ....|++.|+|||.+.+.   .
T Consensus       180 ~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~--~~~~gt~~y~aPE~~~~~---~  253 (681)
T 2pzi_A          180 PVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF--GYLYGTPGFQAPEIVRTG---P  253 (681)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC--SCCCCCTTTSCTTHHHHC---S
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC--CccCCCccccCHHHHcCC---C
Confidence            999999999999999999999999999999999999875 9999999998765433  445689999999998654   4


Q ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcCCCCCCCChhhhhcCccCC
Q 041080          156 GLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVK  234 (247)
Q Consensus       156 ~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~p~~~  234 (247)
                      +.++||||||+++++|++|..|+........       .........++.+.++|.+||..+|.+||+..+.+.++|+.
T Consensus       254 ~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          254 TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEETTEECSSC-------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CCceehhhhHHHHHHHHhCCCCCcccccccc-------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            7899999999999999999888754221100       00000113467899999999999999999999988888764


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=100.00  E-value=5.1e-35  Score=249.38  Aligned_cols=167  Identities=16%  Similarity=0.189  Sum_probs=125.4

Q ss_pred             CceEEEEEEeecCC-----CccchHHHHHHHHHHHHHhhc-CCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcC-
Q 041080            2 GFFFAVKEVSLQDQ-----GAQGKQSILQLEQEISLLSQF-EQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYH-   74 (247)
Q Consensus         2 g~~~~lK~~~~~~~-----~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-   74 (247)
                      |+.|++|++.+...     ........+.+.+|+++|+++ .|+||+++++++++++..||||||++|++|.+++.+.+ 
T Consensus       259 g~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~  338 (569)
T 4azs_A          259 GEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEE  338 (569)
T ss_dssp             CSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCC
T ss_pred             cceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCC
Confidence            78899999986532     123344567799999999999 69999999999999999999999999999999998765 


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccc--cccCCCCCCccCCcccccCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMND--LKSCKGTPFWMAPEVVNSKN  152 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~  152 (247)
                      +++.   +++.||+.||+|+|++||+||||||+||+++.+|.+||+|||+++......  .....||+.|+|||.+.+. 
T Consensus       339 l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-  414 (569)
T 4azs_A          339 IDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-  414 (569)
T ss_dssp             CCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC----
T ss_pred             CCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-
Confidence            5543   588999999999999999999999999999999999999999987554332  2344589999999999654 


Q ss_pred             CCCCcchhHHHHHHHHHHHHhC
Q 041080          153 DGYGLTADIWSLGCTVLEMLTR  174 (247)
Q Consensus       153 ~~~~~~~Di~slG~ll~~l~~g  174 (247)
                        ...++|+|++|++++.+.++
T Consensus       415 --~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          415 --KSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             ----------------CCCCTT
T ss_pred             --CCCcccccccccchhhhccc
Confidence              46689999999988766544


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93  E-value=9.9e-27  Score=197.38  Aligned_cols=168  Identities=19%  Similarity=0.242  Sum_probs=135.7

Q ss_pred             CceEEEEEEeecCCCc---cchHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHH
Q 041080            2 GFFFAVKEVSLQDQGA---QGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDS   78 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   78 (247)
                      |+.+++|.........   ......+.+.+|+.++++++||||+++..++...+..++||||+++++|.++++.      
T Consensus       359 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~------  432 (540)
T 3en9_A          359 DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED------  432 (540)
T ss_dssp             SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT------
T ss_pred             CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH------
Confidence            6778999876533221   1222356689999999999999999766666677788999999999999999876      


Q ss_pred             HHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCcccc---------ccCCCCCCccCCcccc
Q 041080           79 QVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDL---------KSCKGTPFWMAPEVVN  149 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~---------~~~~~~~~~~aPE~~~  149 (247)
                       +..++.|++.+|.|||++||+|+||||+||+++.  .++|+|||++........         ....|++.|+|||.+.
T Consensus       433 -~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~  509 (540)
T 3en9_A          433 -NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWE  509 (540)
T ss_dssp             -CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHH
Confidence             6689999999999999999999999999999988  999999999976654321         2445899999999997


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhCCCCC
Q 041080          150 SKNDGYGLTADIWSLGCTVLEMLTRRPPY  178 (247)
Q Consensus       150 ~~~~~~~~~~Di~slG~ll~~l~~g~~p~  178 (247)
                      .....|+...|+|+...-..+-+.++.+|
T Consensus       510 ~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          510 RFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            53334677889999888888877766655


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82  E-value=2.5e-20  Score=145.82  Aligned_cols=126  Identities=16%  Similarity=0.102  Sum_probs=97.4

Q ss_pred             CCceEEEEEEeecCCCcc-----c--------hHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEeccccCcHH
Q 041080            1 DGFFFAVKEVSLQDQGAQ-----G--------KQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLA   67 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~-----~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   67 (247)
                      +|+.||||++........     .        ......+.+|+.++++++  | +++.+++.. +..++||||++|++|.
T Consensus       113 ~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~  188 (282)
T 1zar_A          113 KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELY  188 (282)
T ss_dssp             TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGG
T ss_pred             CCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHH
Confidence            488999999965332111     1        135667899999999999  4 666665544 4569999999999998


Q ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCCCccCCcc
Q 041080           68 NLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEV  147 (247)
Q Consensus        68 ~~l~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~  147 (247)
                      + +.     ......++.|++.||.+||+.|++|+||||+||+++ ++.++|+|||.+..           +..+.|||.
T Consensus       189 ~-l~-----~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~-----------~~~~~a~e~  250 (282)
T 1zar_A          189 R-VR-----VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE-----------VGEEGWREI  250 (282)
T ss_dssp             G-CC-----CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEE-----------TTSTTHHHH
T ss_pred             H-cc-----hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE-----------CCCCCHHHH
Confidence            7 32     234557999999999999999999999999999999 99999999999853           334677887


Q ss_pred             c
Q 041080          148 V  148 (247)
Q Consensus       148 ~  148 (247)
                      +
T Consensus       251 l  251 (282)
T 1zar_A          251 L  251 (282)
T ss_dssp             H
T ss_pred             H
Confidence            6


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73  E-value=1.5e-17  Score=128.52  Aligned_cols=119  Identities=21%  Similarity=0.274  Sum_probs=88.1

Q ss_pred             CCce--EEEEEEeecCCCcc-------------------chHHHHHHHHHHHHHhhcCCCce--eeeceeeecCCcEEEE
Q 041080            1 DGFF--FAVKEVSLQDQGAQ-------------------GKQSILQLEQEISLLSQFEQDNI--VQYLGTDKDENRLYIF   57 (247)
Q Consensus         1 ~g~~--~~lK~~~~~~~~~~-------------------~~~~~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~~~~~lv   57 (247)
                      +|+.  ||||++........                   .......+.+|+..+..+.|+++  +.+++.    +..++|
T Consensus        71 ~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lV  146 (258)
T 1zth_A           71 DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLL  146 (258)
T ss_dssp             TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEE
T ss_pred             CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEE
Confidence            4777  99999865421110                   11223468899999999988754  334332    356899


Q ss_pred             Eecccc-C----cHHHHHHhcCCCHHHHHHHHHHHHHHHHHhh-hCCeeecCCCCCcEEEcCCCCeEEcccccccc
Q 041080           58 LELVTK-G----SLANLYQKYHLSDSQVSSYTRQILNGLVYLH-ERNVVHRDIKCANILVDASGSVKLADFGLAKA  127 (247)
Q Consensus        58 ~e~~~~-~----~L~~~l~~~~~~~~~~~~~~~~l~~~l~~lh-~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~  127 (247)
                      |||+.+ |    +|.++...  .++..+..++.|++.++.+|| +.|++|+||||+||+++.  .++|+|||++..
T Consensus       147 mE~~g~~g~~~~~L~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~  218 (258)
T 1zth_A          147 MEFIGEDELPAPTLVELGRE--LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVT  218 (258)
T ss_dssp             EECCEETTEECCBHHHHGGG--GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEE
T ss_pred             EEecCCCCCccccHHHHhhc--cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECccccc
Confidence            999942 3    67665432  335568899999999999999 999999999999999988  999999999854


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58  E-value=3.6e-15  Score=120.19  Aligned_cols=121  Identities=15%  Similarity=0.137  Sum_probs=81.0

Q ss_pred             CCceEEEEEEeecCCCcc------------c-----hHHHHHHHHHHHHHhhcCCCceeeeceeeecCCcEEEEEecccc
Q 041080            1 DGFFFAVKEVSLQDQGAQ------------G-----KQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTK   63 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~------------~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   63 (247)
                      +|+.||||+++.......            .     .........|...|.++.+.++.-..-+.. . ..++||||++|
T Consensus       118 ~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~~-~-~~~LVME~i~G  195 (397)
T 4gyi_A          118 KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPIAQ-S-RHTIVMSLVDA  195 (397)
T ss_dssp             TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEEE-E-TTEEEEECCSC
T ss_pred             CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeec-c-CceEEEEecCC
Confidence            589999999864321100            0     001112345667777775444322111111 1 23799999999


Q ss_pred             CcHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCC----------eEEccccccccc
Q 041080           64 GSLANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGS----------VKLADFGLAKAT  128 (247)
Q Consensus        64 ~~L~~~l~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~----------~~l~df~~~~~~  128 (247)
                      ++|.++..     ......++.|++.+|.+||+.|++|+||||.||+++.+|.          +.|+||+.+...
T Consensus       196 ~~L~~l~~-----~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          196 LPMRQVSS-----VPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EEGGGCCC-----CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             ccHhhhcc-----cHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            88865422     2235678899999999999999999999999999988763          899999987543


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.33  E-value=1.1e-11  Score=95.83  Aligned_cols=115  Identities=13%  Similarity=0.172  Sum_probs=89.1

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      |+.++||+........     ...+.+|+.+++.+. +..++++++++...+..++|||+++|.+|.+...    +....
T Consensus        37 ~~~~vlK~~~~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~----~~~~~  107 (263)
T 3tm0_A           37 NENLYLKMTDSRYKGT-----TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE----DEQSP  107 (263)
T ss_dssp             SCEEEEEEECGGGTTS-----TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC----TTTCH
T ss_pred             CCcEEEEeCCcccCCC-----HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC----CcccH
Confidence            6789999886432111     124778999999984 6778899999988899999999999999876521    22234


Q ss_pred             HHHHHHHHHHHHHhhh-----------------------------------------------------------CCeee
Q 041080           81 SSYTRQILNGLVYLHE-----------------------------------------------------------RNVVH  101 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~-----------------------------------------------------------~~i~h  101 (247)
                      ..++.++..++..||+                                                           .+++|
T Consensus       108 ~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~H  187 (263)
T 3tm0_A          108 EKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSH  187 (263)
T ss_dssp             HHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEEC
T ss_pred             HHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEEC
Confidence            4678888899999998                                                           45899


Q ss_pred             cCCCCCcEEEcCCCCeEEcccccc
Q 041080          102 RDIKCANILVDASGSVKLADFGLA  125 (247)
Q Consensus       102 ~dl~~~ni~~~~~~~~~l~df~~~  125 (247)
                      +|+++.||++++++.+.|+||+.+
T Consensus       188 gDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          188 GDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             SSCCTTSEEEETTEEEEECCCTTC
T ss_pred             CCCCcCcEEEECCcEEEEEEchhc
Confidence            999999999987555679999865


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.20  E-value=5.5e-11  Score=91.53  Aligned_cols=110  Identities=21%  Similarity=0.216  Sum_probs=80.4

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCc--eeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDN--IVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDS   78 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~   78 (247)
                      +|+.++||+.....        ...+.+|+..++.+.+.+  +++++++...++..++||||++|.+|.  ..  ..+  
T Consensus        43 ~g~~~vlK~~~~~~--------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~--~~~--  108 (264)
T 1nd4_A           43 GRPVLFVKTDLSGA--------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SS--HLA--  108 (264)
T ss_dssp             TSCCEEEEEECSCT--------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TS--CCC--
T ss_pred             CCCeEEEEeCCccc--------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cC--cCC--
Confidence            36779999875321        124678999998885434  566888888888899999999998884  11  122  


Q ss_pred             HHHHHHHHHHHHHHHhhhCC----------------------------------------------------------ee
Q 041080           79 QVSSYTRQILNGLVYLHERN----------------------------------------------------------VV  100 (247)
Q Consensus        79 ~~~~~~~~l~~~l~~lh~~~----------------------------------------------------------i~  100 (247)
                       ...++.+++..+..||+..                                                          ++
T Consensus       109 -~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~  187 (264)
T 1nd4_A          109 -PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVT  187 (264)
T ss_dssp             -HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEE
T ss_pred             -HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEE
Confidence             2245666667777777643                                                          99


Q ss_pred             ecCCCCCcEEEcCCCCeEEcccccc
Q 041080          101 HRDIKCANILVDASGSVKLADFGLA  125 (247)
Q Consensus       101 h~dl~~~ni~~~~~~~~~l~df~~~  125 (247)
                      |+|++|.||++++++.+.|+||+.+
T Consensus       188 HgDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          188 HGDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             CSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             CCCCCCCcEEEECCcEEEEEcchhc
Confidence            9999999999987655679999875


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.06  E-value=4.9e-10  Score=90.45  Aligned_cols=121  Identities=15%  Similarity=0.263  Sum_probs=88.0

Q ss_pred             CceEEEEEEe--ecCCCccchHHHHHHHHHHHHHhhcC--CCceeeeceeeecC---CcEEEEEeccccCcHHHHHHhcC
Q 041080            2 GFFFAVKEVS--LQDQGAQGKQSILQLEQEISLLSQFE--QDNIVQYLGTDKDE---NRLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         2 g~~~~lK~~~--~~~~~~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      +..+++|+..  ....    ......+.+|+.+++.+.  +..+++++.++.+.   +..++||||++|.++.+.. -..
T Consensus        61 ~~~~vlr~~~~p~~~~----~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~-~~~  135 (359)
T 3dxp_A           61 GQTYVMRAKPGPKSKL----LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS-LPG  135 (359)
T ss_dssp             SCEEEEECCCC--------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT-CTT
T ss_pred             CceEEEEeCCCCCCCC----CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc-ccc
Confidence            4567788765  2211    112345778999999996  45678888887766   4589999999997774311 123


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhh----------------------------------------------------------
Q 041080           75 LSDSQVSSYTRQILNGLVYLHE----------------------------------------------------------   96 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~----------------------------------------------------------   96 (247)
                      ++......++.+++.+|..||+                                                          
T Consensus       136 l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  215 (359)
T 3dxp_A          136 MSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADL  215 (359)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCC
Confidence            6777888899999999999996                                                          


Q ss_pred             CCeeecCCCCCcEEEcCCCC--eEEcccccccc
Q 041080           97 RNVVHRDIKCANILVDASGS--VKLADFGLAKA  127 (247)
Q Consensus        97 ~~i~h~dl~~~ni~~~~~~~--~~l~df~~~~~  127 (247)
                      .+++|+|+++.||+++.++.  +.++||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            35899999999999997764  58999998753


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.00  E-value=7e-10  Score=87.48  Aligned_cols=168  Identities=17%  Similarity=0.151  Sum_probs=104.7

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCc--eeeeceeeecCC---cEEEEEeccccCcHHHHHHhcCCC
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDN--IVQYLGTDKDEN---RLYIFLELVTKGSLANLYQKYHLS   76 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~--i~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~   76 (247)
                      ..++||+...       ......+.+|...++.+. +..  +++++......+   ..++||++++|.++....- ..++
T Consensus        41 ~~~vlR~~~~-------~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~-~~l~  112 (304)
T 3sg8_A           41 RDFIFKFPKH-------SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL-NNLP  112 (304)
T ss_dssp             TSEEEEEESS-------HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH-HTSC
T ss_pred             CEEEEEecCC-------cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc-ccCC
Confidence            4578887532       234567889999998883 433  444555443333   4588999999988865322 2466


Q ss_pred             HHHHHHHHHHHHHHHHHhhh----------------------------------------------------------CC
Q 041080           77 DSQVSSYTRQILNGLVYLHE----------------------------------------------------------RN   98 (247)
Q Consensus        77 ~~~~~~~~~~l~~~l~~lh~----------------------------------------------------------~~   98 (247)
                      ..+...++.+++..+..||+                                                          ..
T Consensus       113 ~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~  192 (304)
T 3sg8_A          113 KQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPC  192 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCE
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCce
Confidence            77777788888888887775                                                          13


Q ss_pred             eeecCCCCCcEEEcC--CCCeEEcccccccccCccccc-cCCCCCCccCCccccc---CCCC---------CCcchhHHH
Q 041080           99 VVHRDIKCANILVDA--SGSVKLADFGLAKATTMNDLK-SCKGTPFWMAPEVVNS---KNDG---------YGLTADIWS  163 (247)
Q Consensus        99 i~h~dl~~~ni~~~~--~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~aPE~~~~---~~~~---------~~~~~Di~s  163 (247)
                      ++|+|+++.||+++.  ++.+.++||+.+........- .......-..|+....   ....         ...-.+.|+
T Consensus       193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~  272 (304)
T 3sg8_A          193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWS  272 (304)
T ss_dssp             EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred             eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence            799999999999998  455789999887543211100 0000000012222110   0000         011268999


Q ss_pred             HHHHHHHHHhCCCCC
Q 041080          164 LGCTVLEMLTRRPPY  178 (247)
Q Consensus       164 lG~ll~~l~~g~~p~  178 (247)
                      ++.+++.+.+|..+|
T Consensus       273 l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          273 FEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHcCCHHH
Confidence            999999999997664


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.74  E-value=9.3e-08  Score=75.85  Aligned_cols=114  Identities=16%  Similarity=0.168  Sum_probs=79.2

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCC----CceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQ----DNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSD   77 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~   77 (247)
                      |+.+++|+...       ......+.+|..+++.+.+    ..++++++.    +..++||||++|.++.... -..++.
T Consensus        57 g~~~vlR~~~~-------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~l~~~~-~~~l~~  124 (320)
T 3r70_A           57 NEQYVVKVPKR-------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGERITYEQ-YHKLSE  124 (320)
T ss_dssp             TTTEEEEEESS-------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBCCCHHH-HTTSCH
T ss_pred             CCEEEEEeCCc-------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCccccccc-cccCCH
Confidence            45678887632       2223457899999888865    234455544    5678999999998886322 123556


Q ss_pred             HHHHHHHHHHHHHHHHhhhC------------------------------------------------------------
Q 041080           78 SQVSSYTRQILNGLVYLHER------------------------------------------------------------   97 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~~------------------------------------------------------------   97 (247)
                      .....++.++...+..||+.                                                            
T Consensus       125 ~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  204 (320)
T 3r70_A          125 KEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFK  204 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhcccccc
Confidence            66666677777777776632                                                            


Q ss_pred             ---CeeecCCCCCcEEEcCCCCeEEcccccccc
Q 041080           98 ---NVVHRDIKCANILVDASGSVKLADFGLAKA  127 (247)
Q Consensus        98 ---~i~h~dl~~~ni~~~~~~~~~l~df~~~~~  127 (247)
                         .++|+|+++.||+++.++.+.++||+.+..
T Consensus       205 ~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          205 YTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV  237 (320)
T ss_dssp             CCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred             CCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence               248999999999999866679999998743


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.72  E-value=3.3e-07  Score=70.73  Aligned_cols=113  Identities=12%  Similarity=0.095  Sum_probs=80.7

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      |..++||+-..        .....+.+|...|+.+. +-.++++++++.+.+..++|||+++|.++.+.....   ....
T Consensus        50 ~~~~~lk~~~~--------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~---~~~~  118 (272)
T 4gkh_A           50 APELFLKHGKG--------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY---PDSG  118 (272)
T ss_dssp             CCCEEEEEEET--------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC---GGGH
T ss_pred             CeEEEEEECCC--------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC---HHHH
Confidence            45688887642        13445778999999884 445788889888899999999999998887654331   1222


Q ss_pred             HHHHHHHHHHHHHhhhC----------------------------------------------------------Ceeec
Q 041080           81 SSYTRQILNGLVYLHER----------------------------------------------------------NVVHR  102 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~----------------------------------------------------------~i~h~  102 (247)
                      ..+..++...+..||+.                                                          .++|+
T Consensus       119 ~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HG  198 (272)
T 4gkh_A          119 ENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHG  198 (272)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECS
T ss_pred             HHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcC
Confidence            33444555555555521                                                          26899


Q ss_pred             CCCCCcEEEcCCCCeEEcccccc
Q 041080          103 DIKCANILVDASGSVKLADFGLA  125 (247)
Q Consensus       103 dl~~~ni~~~~~~~~~l~df~~~  125 (247)
                      |+++.||++++++.+-|+||+.+
T Consensus       199 Dl~~~Nil~~~~~~~~viDwe~a  221 (272)
T 4gkh_A          199 DFSLDNLIFDEGKLIGCIDVGRV  221 (272)
T ss_dssp             CCCTTSEEEETTEEEEECCCTTC
T ss_pred             CCCCCeEEEECCeEEEEEECccc
Confidence            99999999988776779999865


No 262
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.62  E-value=7.7e-07  Score=70.07  Aligned_cols=118  Identities=20%  Similarity=0.194  Sum_probs=76.3

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCC---ceeeeceeee-cCCcEEEEEeccccCcHHHHHHhcCCCH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQD---NIVQYLGTDK-DENRLYIFLELVTKGSLANLYQKYHLSD   77 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~   77 (247)
                      |+.++||+..       .......+.+|..+++.+.+.   .+++++.+.. ..+..+++|++++|.++.... -..++.
T Consensus        39 g~~~VlR~~~-------~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~-~~~l~~  110 (306)
T 3tdw_A           39 NGDWVFRFPK-------SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDG-MAVLPD  110 (306)
T ss_dssp             TTTEEEEEES-------SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHH-HTTSCH
T ss_pred             CCEEEEEecC-------CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhh-hhhCCH
Confidence            4567888742       123456788999999999642   3566666664 456788999999998776521 111233


Q ss_pred             HHHHHHHHHHHHHHHHhhh------------------------------------------------------------C
Q 041080           78 SQVSSYTRQILNGLVYLHE------------------------------------------------------------R   97 (247)
Q Consensus        78 ~~~~~~~~~l~~~l~~lh~------------------------------------------------------------~   97 (247)
                      .....++.++...+..||+                                                            .
T Consensus       111 ~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~  190 (306)
T 3tdw_A          111 DAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTP  190 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCC
Confidence            3333333333333333332                                                            2


Q ss_pred             CeeecCCCCCcEEEcC---CCCe-EEcccccccc
Q 041080           98 NVVHRDIKCANILVDA---SGSV-KLADFGLAKA  127 (247)
Q Consensus        98 ~i~h~dl~~~ni~~~~---~~~~-~l~df~~~~~  127 (247)
                      .++|+|+++.||+++.   ++.+ .|+||+.+..
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            4699999999999987   4554 7999987643


No 263
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=98.53  E-value=2.7e-06  Score=62.55  Aligned_cols=134  Identities=22%  Similarity=0.156  Sum_probs=91.4

Q ss_pred             CcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHhhh-CCeeecCCCCCcEEEcCCCCeEEcccccccccCccccccCCCCC
Q 041080           64 GSLANLYQKY--HLSDSQVSSYTRQILNGLVYLHE-RNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTP  140 (247)
Q Consensus        64 ~~L~~~l~~~--~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~  140 (247)
                      .||.++++.+  +++++++|.++.|.+.+|..+-. ..-...=+.|..|++..+|++.+.+ ..+.          ....
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------~~~~  101 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD----------AGEP  101 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc----------cccc
Confidence            4899999876  49999999999999999887732 1111233456899999999988863 1110          1233


Q ss_pred             CccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCCCChhhHHHHHhhcCCCCCCCCcCCHHHHHHHHHHhcC----
Q 041080          141 FWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQV----  216 (247)
Q Consensus       141 ~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~----  216 (247)
                      .+.+||...   ...+.+.=|||||+++|..+-=..|                  +..+..+|+.+.+||..|.+-    
T Consensus       102 ~~~~pe~~~---~~~te~~~IysLG~tLY~ALDygL~------------------e~eE~eLS~~LE~LL~~Mt~~~~d~  160 (229)
T 2yle_A          102 PPVAGKLGY---SQCMETEVIESLGIIIYKALDYGLK------------------ENEERELSPPLEQLIDHMANTVEAD  160 (229)
T ss_dssp             -----CCSS---SSSCHHHHHHHHHHHHHHHHTTTCC------------------TTEEECCCHHHHHHHHHHTTCCC--
T ss_pred             CCCChhhcc---ccchHHHHHHHHHHHHHHHhhcCCC------------------cccchhhCHHHHHHHHHHHhccccc
Confidence            467888763   2257789999999999998742222                  234567899999999999865    


Q ss_pred             ---------------------CCCCCCChhhhhc
Q 041080          217 ---------------------NPNDRPTVTELME  229 (247)
Q Consensus       217 ---------------------~p~~Rps~~~il~  229 (247)
                                           .+..|.+++++++
T Consensus       161 ~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~  194 (229)
T 2yle_A          161 GSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK  194 (229)
T ss_dssp             ------------------CCSCCCCCCSHHHHHH
T ss_pred             ccccccccccccccccccccccccCcCCHHHHHH
Confidence                                 3467888988886


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.39  E-value=1.2e-06  Score=70.69  Aligned_cols=56  Identities=13%  Similarity=0.084  Sum_probs=39.9

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCc--eeeeceeeecC-CcEEEEEeccccCcH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDN--IVQYLGTDKDE-NRLYIFLELVTKGSL   66 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~-~~~~lv~e~~~~~~L   66 (247)
                      +|+.++||.....          ..+..|...++.+...+  +++++.+.... +..++|||+++|.++
T Consensus        63 ~g~~~vlK~~~~~----------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l  121 (362)
T 3ovc_A           63 GGRGYVLRVNSCA----------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL  121 (362)
T ss_dssp             TTEEEEEEEESCC----------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred             CCcEEEEEeCCch----------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence            4678888877421          14778889998886433  56677766654 678999999998655


No 265
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.17  E-value=3.8e-06  Score=67.45  Aligned_cols=63  Identities=3%  Similarity=0.026  Sum_probs=38.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-C--CceeeeceeeecC---CcEEEEEeccccCcH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-Q--DNIVQYLGTDKDE---NRLYIFLELVTKGSL   66 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~~i~~~~~~~~~~---~~~~lv~e~~~~~~L   66 (247)
                      |+.+++|..........  .....+.+|+.+++.+. +  -.+++++.+..+.   +..++|||+++|.++
T Consensus        52 ~~~~vlR~~~~~~~~~~--~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A           52 QQKLVARVAPAAEDVPV--FPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             EEEEEEEECCCGGGCCS--SSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCC
T ss_pred             CceEEEEeCCCCCcccc--CchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCCh
Confidence            56788887653220000  00123567888888774 3  3567777776655   457899999988654


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.87  E-value=0.00024  Score=56.40  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=26.4

Q ss_pred             CCeeecCCCCCcEEEcCCCCeEEcccccc
Q 041080           97 RNVVHRDIKCANILVDASGSVKLADFGLA  125 (247)
Q Consensus        97 ~~i~h~dl~~~ni~~~~~~~~~l~df~~~  125 (247)
                      .+++|+|+++.||+++.++.+.++||+.+
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            57999999999999988888999999865


No 267
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.83  E-value=9.5e-05  Score=58.69  Aligned_cols=31  Identities=35%  Similarity=0.389  Sum_probs=26.4

Q ss_pred             CCeeecCCCCCcEEEcCC----CCeEEcccccccc
Q 041080           97 RNVVHRDIKCANILVDAS----GSVKLADFGLAKA  127 (247)
Q Consensus        97 ~~i~h~dl~~~ni~~~~~----~~~~l~df~~~~~  127 (247)
                      ..++|+|+++.||+++.+    +.+.++||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            469999999999999874    6789999987643


No 268
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.74  E-value=9.8e-05  Score=57.47  Aligned_cols=57  Identities=19%  Similarity=0.082  Sum_probs=40.7

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCC---ceeeeceeeecCCcEEEEEeccccCcH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQD---NIVQYLGTDKDENRLYIFLELVTKGSL   66 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~lv~e~~~~~~L   66 (247)
                      ||+.++||+......     .....+..|+..|+.+.+.   .+++++++.    ..++||||++|+++
T Consensus        38 dG~~~vvK~~~~~~~-----~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~~   97 (288)
T 3d1u_A           38 DGTPLFVKALPDDAP-----ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERPP   97 (288)
T ss_dssp             TSCEEEEEECCTTCC-----CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCCC
T ss_pred             CCCeEEEEecCCCCc-----chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCCC
Confidence            578899998643211     1123578999999999764   577777753    46899999998764


No 269
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.68  E-value=0.00012  Score=59.59  Aligned_cols=30  Identities=20%  Similarity=0.355  Sum_probs=24.9

Q ss_pred             hCCeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           96 ERNVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        96 ~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      ...++|||+++.||+++.+ .+.++||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            3579999999999999765 48899997654


No 270
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.59  E-value=0.00047  Score=54.20  Aligned_cols=58  Identities=16%  Similarity=0.119  Sum_probs=44.2

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC---CCceeeeceeeecCCcEEEEEeccccCcH
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE---QDNIVQYLGTDKDENRLYIFLELVTKGSL   66 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   66 (247)
                      ++..++||+....        ....+..|...|+.|.   ...+++++.+....+..++|||+++|..+
T Consensus        58 ~~~~~vlK~~~~~--------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           58 EVQTVFVKINERS--------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             SSCEEEEEEEEGG--------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             CCCeEEEEeCCcc--------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            3567888887532        2456778988888883   36788888888888899999999998653


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.40  E-value=0.00082  Score=52.47  Aligned_cols=28  Identities=25%  Similarity=0.443  Sum_probs=24.0

Q ss_pred             CeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           98 NVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        98 ~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      .++|+|+.+.||+ ..++.+.++||..+.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            4899999999999 566788999998764


No 272
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.35  E-value=0.0015  Score=53.64  Aligned_cols=32  Identities=13%  Similarity=0.323  Sum_probs=27.4

Q ss_pred             hhCCeeecCCCCCcEEEcCCCCeEEcccccccc
Q 041080           95 HERNVVHRDIKCANILVDASGSVKLADFGLAKA  127 (247)
Q Consensus        95 h~~~i~h~dl~~~ni~~~~~~~~~l~df~~~~~  127 (247)
                      +...++|||+++.||+++.++ +.++||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            456799999999999998776 99999987753


No 273
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.33  E-value=0.00056  Score=55.30  Aligned_cols=115  Identities=17%  Similarity=0.151  Sum_probs=68.8

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeecCCcEEEEEeccccCcHH-----------HH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDENRLYIFLELVTKGSLA-----------NL   69 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~-----------~~   69 (247)
                      ++.|+||+....   .   .......+|..+++.+. +.-.+++++.+..    .+|+||++|.+|.           .+
T Consensus        82 ~~~~vlR~~g~~---~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~i  151 (379)
T 3feg_A           82 PREVLLRLYGAI---L---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAI  151 (379)
T ss_dssp             CSEEEEEECC---------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHH
T ss_pred             CCeEEEEECCCc---c---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHH
Confidence            467888886321   1   12334558888888884 3333566666543    2999999986542           11


Q ss_pred             ---HH---hcC------CC--HHHHHHHHHHHHH-------------------HHHHhh----h----CCeeecCCCCCc
Q 041080           70 ---YQ---KYH------LS--DSQVSSYTRQILN-------------------GLVYLH----E----RNVVHRDIKCAN  108 (247)
Q Consensus        70 ---l~---~~~------~~--~~~~~~~~~~l~~-------------------~l~~lh----~----~~i~h~dl~~~n  108 (247)
                         +.   ...      ..  ...+.++..++-.                   .+..|.    .    ..++|+|+.+.|
T Consensus       152 a~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~N  231 (379)
T 3feg_A          152 ATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGN  231 (379)
T ss_dssp             HHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGG
T ss_pred             HHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCe
Confidence               11   111      11  2345555544322                   122222    2    258999999999


Q ss_pred             EEEcCC----CCeEEccccccc
Q 041080          109 ILVDAS----GSVKLADFGLAK  126 (247)
Q Consensus       109 i~~~~~----~~~~l~df~~~~  126 (247)
                      |+++.+    +.+.++||..+.
T Consensus       232 il~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          232 ILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEEESCC---CCEEECCCTTCE
T ss_pred             EEEcCCCCccCcEEEEecccCC
Confidence            999876    689999998764


No 274
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.23  E-value=0.0029  Score=49.86  Aligned_cols=28  Identities=25%  Similarity=0.259  Sum_probs=24.1

Q ss_pred             CCeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           97 RNVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        97 ~~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      ..++|+|+++.||+++ + .+.++||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            4589999999999998 4 88999998754


No 275
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.08  E-value=0.00096  Score=52.51  Aligned_cols=30  Identities=27%  Similarity=0.298  Sum_probs=25.2

Q ss_pred             CCeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           97 RNVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        97 ~~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      .+++|+|+++.||+++.++.+.++||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            369999999999999877556899998763


No 276
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.93  E-value=0.0037  Score=51.40  Aligned_cols=53  Identities=8%  Similarity=-0.004  Sum_probs=32.9

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCce-eeeceeeecCCcEEEEEeccccCc
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNI-VQYLGTDKDENRLYIFLELVTKGS   65 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~   65 (247)
                      ++.++||++...    ..   .+.+..|..+++.+...++ +++++.+..    .+|++|++|.+
T Consensus       105 ~~~~vlRi~~~~----~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~G~~  158 (429)
T 1nw1_A          105 PNKVLLRVYFNP----ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRP  158 (429)
T ss_dssp             CSEEEEEEECSC----CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEE
T ss_pred             CceEEEEEeCCC----Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeCCcc
Confidence            467899988421    11   1234478888888853333 566665542    28999998744


No 277
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.91  E-value=0.004  Score=48.18  Aligned_cols=56  Identities=20%  Similarity=0.102  Sum_probs=35.5

Q ss_pred             CCceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCC---CceeeeceeeecCCcEEEEEeccccCc
Q 041080            1 DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQ---DNIVQYLGTDKDENRLYIFLELVTKGS   65 (247)
Q Consensus         1 ~g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~~~~~lv~e~~~~~~   65 (247)
                      ||+.|+||+.......     ....+..|+..|+.|..   -.+++++++.    ..+++||+..++.
T Consensus        38 DG~~~~vK~~~~~~~~-----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~   96 (288)
T 3f7w_A           38 DGTPLFVKALPDDAPA-----LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP   96 (288)
T ss_dssp             TSCEEEEEECCTTCCC-----CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred             CCCEEEEEEeCCCCcc-----hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence            6899999987543211     12246789998888842   2345555542    3478999987753


No 278
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.46  E-value=0.0073  Score=49.09  Aligned_cols=29  Identities=28%  Similarity=0.364  Sum_probs=25.6

Q ss_pred             CeeecCCCCCcEEEcCC------CCeEEccccccc
Q 041080           98 NVVHRDIKCANILVDAS------GSVKLADFGLAK  126 (247)
Q Consensus        98 ~i~h~dl~~~ni~~~~~------~~~~l~df~~~~  126 (247)
                      .++|+|+.+.||+++.+      +.+.++||..+.
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            48999999999999876      789999998763


No 279
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=95.39  E-value=0.095  Score=38.44  Aligned_cols=115  Identities=9%  Similarity=0.058  Sum_probs=77.8

Q ss_pred             CCCceeeeceeeecCCcEEEEEecccc-CcHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCC
Q 041080           37 EQDNIVQYLGTDKDENRLYIFLELVTK-GSLANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASG  115 (247)
Q Consensus        37 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~  115 (247)
                      .||+.++. .+..+.+.+.+.++.-+. .++..   -...+....++++.+++....+++  .-+|--++|+|++++.++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~~~  116 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTRDG  116 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECTTS
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcCCC
Confidence            57888876 555666766666665542 23333   334788899999999988774443  346677999999999999


Q ss_pred             CeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 041080          116 SVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYS  179 (247)
Q Consensus       116 ~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~  179 (247)
                      .+++.-.|+...               ++|.       ..+...=+-.+=+++..++.++..|+
T Consensus       117 ~p~i~~RGik~~---------------l~P~-------~~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          117 LPIAKTRGLQNV---------------VDPL-------PVSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             CEEESCCEETTT---------------BSCC-------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             CEEEEEccCccC---------------CCCC-------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            999986665321               1222       13434445567788888998887763


No 280
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=94.86  E-value=0.44  Score=35.07  Aligned_cols=114  Identities=9%  Similarity=0.060  Sum_probs=76.8

Q ss_pred             CCCceeeeceeeecCCcEEEEEeccccC-cHHHHHHhcCCCHHHHHHHHHHHHHHHH-HhhhCCeeecCCCCCcEEEcCC
Q 041080           37 EQDNIVQYLGTDKDENRLYIFLELVTKG-SLANLYQKYHLSDSQVSSYTRQILNGLV-YLHERNVVHRDIKCANILVDAS  114 (247)
Q Consensus        37 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~l~~~l~-~lh~~~i~h~dl~~~ni~~~~~  114 (247)
                      .||+. + ...-.+++.+.+.++.-+++ ++..+   ...+....++++.+|+.... ++  ..-+|--++|+|++++.+
T Consensus        48 ~~~~f-~-~~I~~~eD~~~i~y~~~~~~~~f~~i---~~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~  120 (219)
T 4ano_A           48 VDPCI-V-RDIDVSEDEVKVVIKPPSSFLTFAAI---RKTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRA  120 (219)
T ss_dssp             SCSSS-E-EEEEECSSEEEEEEECCTTCEEHHHH---HTSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTT
T ss_pred             cCCCC-C-eEEEEeCCEEEEEEEcCcccCcHHHH---HhcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCC
Confidence            57777 3 34446777777777776443 44433   45888999999999988665 33  344677899999999999


Q ss_pred             CCeEEcccccccccCccccccCCCCCCccCCcccccCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Q 041080          115 GSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYS  179 (247)
Q Consensus       115 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Di~slG~ll~~l~~g~~p~~  179 (247)
                      +.+++.-.|+-.               -++|..       .+...=+-.+=+++..++.++..|+
T Consensus       121 ~~p~i~hRGi~~---------------~lpP~e-------~~ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          121 LEPFFLHVGVKE---------------SLPPDE-------WDDERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             CCEEESCCEETT---------------TBSSCS-------CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             CcEEEEEcCCcc---------------cCCCCC-------CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            999998776532               122222       2333344566778888888877653


No 281
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.78  E-value=0.065  Score=42.44  Aligned_cols=30  Identities=27%  Similarity=0.413  Sum_probs=26.5

Q ss_pred             CCeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           97 RNVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        97 ~~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      ..++|+|+++.||+++.++.+.++||+.+.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            469999999999999988889999997664


No 282
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=92.25  E-value=0.19  Score=40.20  Aligned_cols=28  Identities=25%  Similarity=0.414  Sum_probs=23.4

Q ss_pred             CeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           98 NVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        98 ~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      +++|+|+++.||+++.++ +.++||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            589999999999997654 8999998764


No 283
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=91.80  E-value=0.23  Score=41.14  Aligned_cols=55  Identities=11%  Similarity=-0.013  Sum_probs=33.1

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCce-eeeceeeecCCcEEEEEeccccCcH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNI-VQYLGTDKDENRLYIFLELVTKGSL   66 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~L   66 (247)
                      +..++||++......-..      -.+|..+++.|...++ +++++.+. +   ..|+||++|.+|
T Consensus       133 ~~~~vLRi~g~~~~~~id------R~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~l  188 (458)
T 2qg7_A          133 QAKYLIRLYGPKTDEIIN------REREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYAL  188 (458)
T ss_dssp             TEEEEEEEECC-CCSCSC------HHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEEC
T ss_pred             CceEEEEECCCChhhhcC------HHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCccC
Confidence            367889987432111111      1478888888864444 56766663 2   259999987443


No 284
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.28  E-value=0.35  Score=39.20  Aligned_cols=28  Identities=29%  Similarity=0.400  Sum_probs=24.0

Q ss_pred             eeecCCCCCcEEEc------CCCCeEEccccccc
Q 041080           99 VVHRDIKCANILVD------ASGSVKLADFGLAK  126 (247)
Q Consensus        99 i~h~dl~~~ni~~~------~~~~~~l~df~~~~  126 (247)
                      ++|+|+.+.||++.      .++.+.++||..+.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            68999999999993      45679999998874


No 285
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=83.83  E-value=0.55  Score=38.42  Aligned_cols=28  Identities=18%  Similarity=0.490  Sum_probs=25.0

Q ss_pred             CeeecCCCCCcEEEcCCCCeEEccccccc
Q 041080           98 NVVHRDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus        98 ~i~h~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      .++|+|+.+.||+ +.++.+.++||..+.
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCC
Confidence            4899999999999 778899999998774


No 286
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=76.46  E-value=22  Score=27.68  Aligned_cols=76  Identities=16%  Similarity=0.116  Sum_probs=46.7

Q ss_pred             eEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC---CCceeeecee------eecCCcEEEEEeccccCcHHHHHHhcC
Q 041080            4 FFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE---QDNIVQYLGT------DKDENRLYIFLELVTKGSLANLYQKYH   74 (247)
Q Consensus         4 ~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~------~~~~~~~~lv~e~~~~~~L~~~l~~~~   74 (247)
                      .++||+......           ..|+..++.|.   -+.+++++..      ....+..+++|+|++|..+.    ...
T Consensus        48 ~~vLK~~~~~~~-----------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~~----~~~  112 (339)
T 3i1a_A           48 SYFIKLKYGYHD-----------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNGF----TQN  112 (339)
T ss_dssp             EEEEEEEECSSC-----------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBTT----TSC
T ss_pred             CEEEEEecCccc-----------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcCc----ccC
Confidence            889998765331           24555555552   2325555432      23457789999999997662    122


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhCC
Q 041080           75 LSDSQVSSYTRQILNGLVYLHERN   98 (247)
Q Consensus        75 ~~~~~~~~~~~~l~~~l~~lh~~~   98 (247)
                      .+...    +.++..++..||+..
T Consensus       113 ~~~~~----~~~lg~~La~LH~~~  132 (339)
T 3i1a_A          113 LTGKQ----WKQLGKVLRQIHETS  132 (339)
T ss_dssp             CCHHH----HHHHHHHHHHHHTCC
T ss_pred             CCHHH----HHHHHHHHHHHhCcC
Confidence            34332    457778889999875


No 287
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=69.17  E-value=59  Score=28.45  Aligned_cols=26  Identities=27%  Similarity=0.416  Sum_probs=23.5

Q ss_pred             cCCCCCcEEEcCCCCeEEcccccccc
Q 041080          102 RDIKCANILVDASGSVKLADFGLAKA  127 (247)
Q Consensus       102 ~dl~~~ni~~~~~~~~~l~df~~~~~  127 (247)
                      ||=+++||+++.+|.+.=+|||....
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f~  576 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYILG  576 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCTT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhhc
Confidence            79999999999999999999998743


No 288
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=68.88  E-value=10  Score=30.95  Aligned_cols=81  Identities=9%  Similarity=-0.022  Sum_probs=47.3

Q ss_pred             CceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcC-CCceeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHH
Q 041080            2 GFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFE-QDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQV   80 (247)
Q Consensus         2 g~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~   80 (247)
                      ++.|+||+.......-      -+-.+|..+++.+. +.-.+++++.+.    -+.|++|++|.+|..-    .+..   
T Consensus       102 ~~~~vlRi~g~~t~~~------idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~efI~G~~l~~~----~l~~---  164 (424)
T 3mes_A          102 HPRILFRIYGKHVGKF------YDSKVELDVFRYLSNINIAPNIIADFP----EGRIEEFIDGEPLTTK----QLQL---  164 (424)
T ss_dssp             CSEEEEEECCCCC-CC------CCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEECCCSEECCTG----GGGS---
T ss_pred             CCeEEEEECCCCcchh------cCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEEEeCCccCChh----hcCC---
Confidence            5778999874321111      11247777777774 322455555432    2689999998654310    1111   


Q ss_pred             HHHHHHHHHHHHHhhhCCe
Q 041080           81 SSYTRQILNGLVYLHERNV   99 (247)
Q Consensus        81 ~~~~~~l~~~l~~lh~~~i   99 (247)
                      ..++.+++..|+.||+...
T Consensus       165 ~~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          165 THICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             HHHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHHHHhcCch
Confidence            2356788888899997644


No 289
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=66.80  E-value=0.45  Score=39.64  Aligned_cols=29  Identities=14%  Similarity=-0.111  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHHhhcCCCceeeeceeeecC
Q 041080           23 ILQLEQEISLLSQFEQDNIVQYLGTDKDE   51 (247)
Q Consensus        23 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   51 (247)
                      .+.|..|++.+.+++|+|+++++|||...
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            55789999999999999999999998765


No 290
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=64.66  E-value=20  Score=29.50  Aligned_cols=35  Identities=23%  Similarity=0.505  Sum_probs=19.2

Q ss_pred             cCcHHHHHHhcCCCHHHH--HHHHHHHHHHHHHhhhC
Q 041080           63 KGSLANLYQKYHLSDSQV--SSYTRQILNGLVYLHER   97 (247)
Q Consensus        63 ~~~L~~~l~~~~~~~~~~--~~~~~~l~~~l~~lh~~   97 (247)
                      +|.+.+++....+....+  ..++.+++..|+.||+.
T Consensus       176 ~G~v~e~I~G~~l~~~~l~~~~~~~~ia~~La~LH~~  212 (458)
T 2qg7_A          176 NGRIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHDI  212 (458)
T ss_dssp             TEEEEECCCSEECCTTTTTSHHHHHHHHHHHHHHHTC
T ss_pred             CeEEEEeeCCccCChhhcCCHHHHHHHHHHHHHHhcC
Confidence            445555554333322111  24567778888888864


No 291
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=58.45  E-value=12  Score=29.54  Aligned_cols=78  Identities=14%  Similarity=-0.005  Sum_probs=44.6

Q ss_pred             ceEEEEEEeecCCCccchHHHHHHHHHHHHHhhcCCCc-eeeeceeeecCCcEEEEEeccccCcHHHHHHhcCCCHHHHH
Q 041080            3 FFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDN-IVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQVS   81 (247)
Q Consensus         3 ~~~~lK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~   81 (247)
                      +.+++|+......      .......|..+++.+...+ ++++++.+  .  -++|++|++|.++...    .+..   .
T Consensus        67 ~~~vlRi~~~~~~------~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e~i~G~~l~~~----~~~~---~  129 (369)
T 3c5i_A           67 TRVLFRIYGKHVD------ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEEWLYGDPLRID----DLKN---P  129 (369)
T ss_dssp             CEEEEEECCTTGG------GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEECCCSEECCGG----GGGC---H
T ss_pred             ceEEEEecCCCcc------ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEEEecCCcCChh----hcCC---h
Confidence            6788888753211      1112357777787774333 44566544  2  2689999998654210    0111   1


Q ss_pred             HHHHHHHHHHHHhhhC
Q 041080           82 SYTRQILNGLVYLHER   97 (247)
Q Consensus        82 ~~~~~l~~~l~~lh~~   97 (247)
                      ..+.+++..|..+|+.
T Consensus       130 ~~~~~~a~~La~lH~~  145 (369)
T 3c5i_A          130 TILIGIANVLGKFHTL  145 (369)
T ss_dssp             HHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHcC
Confidence            3456778888888864


No 292
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=54.24  E-value=1.1e+02  Score=26.42  Aligned_cols=26  Identities=27%  Similarity=0.411  Sum_probs=23.2

Q ss_pred             cCCCCCcEEEcCCCCeEEcccccccc
Q 041080          102 RDIKCANILVDASGSVKLADFGLAKA  127 (247)
Q Consensus       102 ~dl~~~ni~~~~~~~~~l~df~~~~~  127 (247)
                      ||=+++||+++.+|.+.=+|||..-.
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f~  502 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYILG  502 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCTT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhhc
Confidence            68899999999999999999998743


No 293
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=42.95  E-value=40  Score=30.73  Aligned_cols=26  Identities=27%  Similarity=0.422  Sum_probs=22.6

Q ss_pred             cCCCCCcEEEcCCCCeEEcccccccc
Q 041080          102 RDIKCANILVDASGSVKLADFGLAKA  127 (247)
Q Consensus       102 ~dl~~~ni~~~~~~~~~l~df~~~~~  127 (247)
                      ||=+++||+++.+|.+.=+|||..-.
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f~  829 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHILG  829 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC--
T ss_pred             cCCCCcceEEecCCCEEEEeehhhhc
Confidence            78899999999999999999998753


No 294
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=41.82  E-value=92  Score=28.92  Aligned_cols=25  Identities=32%  Similarity=0.446  Sum_probs=23.2

Q ss_pred             cCCCCCcEEEcCCCCeEEccccccc
Q 041080          102 RDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus       102 ~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      ||=+++||+++.+|.+.=+|||..-
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            7999999999999999999999864


No 295
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=33.98  E-value=25  Score=21.32  Aligned_cols=31  Identities=23%  Similarity=0.499  Sum_probs=25.4

Q ss_pred             HHHHHHHHhcCCCCCCCChhhhhc-----CccCCCC
Q 041080          206 ARDFILKCLQVNPNDRPTVTELME-----HPFVKRP  236 (247)
Q Consensus       206 ~~~li~~~l~~~p~~Rps~~~il~-----~p~~~~~  236 (247)
                      ...||...+.-.|.+|.|..||.+     .|||+..
T Consensus        10 Y~~LI~~Ai~~sp~~~ltL~eIY~~i~~~fpyy~~~   45 (85)
T 3bpy_A           10 YAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDK   45 (85)
T ss_dssp             HHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTC
T ss_pred             HHHHHHHHHHhCCcCCccHHHHHHHHHHhCcchhcC
Confidence            466888888889999999999864     7899864


No 296
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=32.88  E-value=57  Score=25.67  Aligned_cols=74  Identities=19%  Similarity=0.204  Sum_probs=41.1

Q ss_pred             CcEEEEEeccccCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHhhhCC----e-eecCCCCCcEEEcCCCC-eEEccc
Q 041080           52 NRLYIFLELVTKGSLANLYQK---YHLSDSQVSSYTRQILNGLVYLHERN----V-VHRDIKCANILVDASGS-VKLADF  122 (247)
Q Consensus        52 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~l~~~l~~lh~~~----i-~h~dl~~~ni~~~~~~~-~~l~df  122 (247)
                      +..+++|+|.+|..|...-..   ..+..+....+. + +-++..+.+++    . .+..=.++||++..++. +.++|.
T Consensus       155 ~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG-~-Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDh  232 (342)
T 1cja_A          155 QANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLG-S-LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDS  232 (342)
T ss_dssp             CSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHH-H-HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSC
T ss_pred             ccceehhhhcCCCccccchhhhhhhhcCHHHHHhhc-h-hheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcC
Confidence            357799999998666432111   113333332211 1 22445555442    1 11235788999987554 888999


Q ss_pred             ccccc
Q 041080          123 GLAKA  127 (247)
Q Consensus       123 ~~~~~  127 (247)
                      +++..
T Consensus       233 n~af~  237 (342)
T 1cja_A          233 KIIPL  237 (342)
T ss_dssp             CCCCC
T ss_pred             Ccccc
Confidence            88743


No 297
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=29.19  E-value=42  Score=21.17  Aligned_cols=30  Identities=20%  Similarity=0.403  Sum_probs=24.6

Q ss_pred             HHHHHHHHhcCCCCCCCChhhhhc-----CccCCC
Q 041080          206 ARDFILKCLQVNPNDRPTVTELME-----HPFVKR  235 (247)
Q Consensus       206 ~~~li~~~l~~~p~~Rps~~~il~-----~p~~~~  235 (247)
                      ...||...+.-.|.+|.|+.||.+     .|||+.
T Consensus         8 Y~~LI~~AI~~sp~~~LtL~eIY~~I~~~fpyyr~   42 (102)
T 1vtn_C            8 YISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRE   42 (102)
T ss_dssp             HHHHHHHHHHTSTTSCBCHHHHHHHHHHHCGGGGS
T ss_pred             HHHHHHHHHHhCCCCCCcHHHHHHHHHHcCCcccc
Confidence            456888888889999999999964     788875


No 298
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=28.82  E-value=33  Score=21.98  Aligned_cols=32  Identities=22%  Similarity=0.488  Sum_probs=26.5

Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhc-----CccCCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELME-----HPFVKRP  236 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~-----~p~~~~~  236 (247)
                      ....||...+.-.|.+|.|+.+|.+     .|||+..
T Consensus        28 SY~~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~~   64 (110)
T 3l2c_A           28 SYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDK   64 (110)
T ss_dssp             CHHHHHHHHHHHSTTSCBCHHHHHHHHHHHCGGGTTC
T ss_pred             CHHHHHHHHHHhCCccCcCHHHHHHHHHHhCchhhcC
Confidence            3567888888889999999999974     7899864


No 299
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=28.61  E-value=2.7e+02  Score=23.60  Aligned_cols=59  Identities=19%  Similarity=0.211  Sum_probs=50.4

Q ss_pred             cHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhCCeeecCCCCCcEEEcCCCCeEEcccccc
Q 041080           65 SLANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLA  125 (247)
Q Consensus        65 ~L~~~l~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~~~ni~~~~~~~~~l~df~~~  125 (247)
                      .|.=++++  -+++++...+.+.-.||..|-..||.-||.=..|+=|+..|++..-|+.--
T Consensus       421 PLNLYL~~--a~~~~~~~av~eYG~AIKqLAaANIFPGDML~KNFGVTRhgRVVFYDYDEI  479 (578)
T 3eps_A          421 PLNIWLEQ--VEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEI  479 (578)
T ss_dssp             EHHHHHHH--CCTHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred             chhHHHhh--CCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCccccceEEEecccce
Confidence            45556665  466778888999999999999999999999999999999999998888644


No 300
>3coa_C Forkhead box protein O1; winged helix, forkhead domain, chromosomal rearrangement; HET: DNA; 2.20A {Homo sapiens} PDB: 3co7_C* 2k86_A 2uzk_A
Probab=28.52  E-value=42  Score=21.79  Aligned_cols=32  Identities=25%  Similarity=0.481  Sum_probs=25.9

Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhc-----CccCCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELME-----HPFVKRP  236 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~-----~p~~~~~  236 (247)
                      ....||...+.-.|.+|.|+.||.+     .|||+..
T Consensus        15 SYa~LI~~AI~~sp~~~LTL~eIY~~I~~~fPyyr~~   51 (117)
T 3coa_C           15 SYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDK   51 (117)
T ss_dssp             CHHHHHHHHHHTSTTSCBCHHHHHHHHHHHCGGGTTC
T ss_pred             CHHHHHHHHHHhCCCCCccHHHHHHHHHHhCcccccC
Confidence            3567888888889999999999864     7888853


No 301
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged; winged helix protein, structure, transcription; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=27.64  E-value=43  Score=21.05  Aligned_cols=31  Identities=19%  Similarity=0.339  Sum_probs=25.0

Q ss_pred             HHHHHHHHhcCCCCCCCChhhhh-----cCccCCCC
Q 041080          206 ARDFILKCLQVNPNDRPTVTELM-----EHPFVKRP  236 (247)
Q Consensus       206 ~~~li~~~l~~~p~~Rps~~~il-----~~p~~~~~  236 (247)
                      ...||...+.-.|.+|.|+.||.     +.|||+..
T Consensus         7 Y~~LI~~AI~~sp~~~ltL~eIY~~i~~~fpyyr~~   42 (100)
T 1kq8_A            7 YIALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGS   42 (100)
T ss_dssp             CHHHHHHHHTTSSSSCBCHHHHHHHHHHHCTTGGGT
T ss_pred             HHHHHHHHHHhCCCCCCcHHHHHHHHHHhCccccCC
Confidence            45688888888999999999996     47888753


No 302
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=26.23  E-value=41  Score=21.32  Aligned_cols=26  Identities=27%  Similarity=0.454  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          204 RDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       204 ~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ..+++.|..++..+|.+..|+.++.+
T Consensus        50 l~iRN~iI~~yr~nP~~yLT~t~~r~   75 (104)
T 2fq3_A           50 MRYRNFMVNSYRLNPNEYFSVTTARR   75 (104)
T ss_dssp             HHHHHHHHHHHHHCTTSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCceeeeHHHHHH
Confidence            35789999999999999999998865


No 303
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=26.11  E-value=34  Score=31.11  Aligned_cols=25  Identities=32%  Similarity=0.426  Sum_probs=23.0

Q ss_pred             cCCCCCcEEEcCCCCeEEccccccc
Q 041080          102 RDIKCANILVDASGSVKLADFGLAK  126 (247)
Q Consensus       102 ~dl~~~ni~~~~~~~~~l~df~~~~  126 (247)
                      ||=+++||+++.+|.+.=+|||..-
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            7889999999999999999999864


No 304
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=25.85  E-value=4.1e+02  Score=24.78  Aligned_cols=26  Identities=31%  Similarity=0.388  Sum_probs=23.4

Q ss_pred             cCCCCCcEEEcCCCCeEEcccccccc
Q 041080          102 RDIKCANILVDASGSVKLADFGLAKA  127 (247)
Q Consensus       102 ~dl~~~ni~~~~~~~~~l~df~~~~~  127 (247)
                      ||=+++||+++.+|.+.=+|||....
T Consensus       937 gDRH~~NILid~tG~v~HIDFG~~f~  962 (1091)
T 3hhm_A          937 GDRHNSNIMVKDDGQLFHIDFGHFLD  962 (1091)
T ss_dssp             CCCCTTTEEEETTSCEEECCCCCCSC
T ss_pred             cCCCCcceEEeCCCCEEEEeehhhhc
Confidence            68899999999999999999998743


No 305
>2c6y_A Forkhead box protein K2; transcription regulation, DNA-binding domain, forkhead transcription factors, interleukin enhancer binding factor; 2.4A {Homo sapiens} SCOP: a.4.5.14 PDB: 1jxs_A 2a3s_A 2d2w_A
Probab=23.11  E-value=50  Score=21.19  Aligned_cols=31  Identities=13%  Similarity=0.435  Sum_probs=25.5

Q ss_pred             HHHHHHHHHhcCCCCCCCChhhhhc-----CccCCC
Q 041080          205 DARDFILKCLQVNPNDRPTVTELME-----HPFVKR  235 (247)
Q Consensus       205 ~~~~li~~~l~~~p~~Rps~~~il~-----~p~~~~  235 (247)
                      ....||...+.-.|.+|.|+.||.+     .|||+.
T Consensus        20 SYa~LI~~AI~~sp~~~LtL~eIY~~I~~~fPyyr~   55 (111)
T 2c6y_A           20 SYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRT   55 (111)
T ss_dssp             CHHHHHHHHHHTSTTSCEEHHHHHHHHHHHCTTSCT
T ss_pred             CHHHHHHHHHHhCCCCCCcHHHHHHHHHHcCCcccc
Confidence            3567888888889999999999874     888885


No 306
>2dce_A KIAA1915 protein; swirm domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.05  E-value=49  Score=21.24  Aligned_cols=26  Identities=15%  Similarity=0.180  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHhcCCCCCCCChhhhhc
Q 041080          204 RDARDFILKCLQVNPNDRPTVTELME  229 (247)
Q Consensus       204 ~~~~~li~~~l~~~p~~Rps~~~il~  229 (247)
                      ..+++.|..++..+|.+..|+.++.+
T Consensus        51 l~iRN~iI~~yr~np~~yLT~t~~rr   76 (111)
T 2dce_A           51 LKIRNYILDQWEICKPKYLNKTSVRP   76 (111)
T ss_dssp             HHHHHHHHHHHHHHTTSCCCGGGTTT
T ss_pred             HHHHHHHHHHHHhCCcceeeHHHHHH
Confidence            35789999999999999999998864


No 307
>2eqg_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=20.38  E-value=56  Score=16.81  Aligned_cols=15  Identities=27%  Similarity=0.521  Sum_probs=12.5

Q ss_pred             cCccCCCCCCCCCCc
Q 041080          229 EHPFVKRPLQTPRCG  243 (247)
Q Consensus       229 ~~p~~~~~~~~~~~~  243 (247)
                      +.|||.+..-+|.|-
T Consensus        18 nCpF~mSVnTQP~CH   32 (49)
T 2eqg_A           18 NCPFFMSVNTQPLCH   32 (49)
T ss_dssp             TCCSBCCTTTTTSCH
T ss_pred             CCCeEEEecCccchH
Confidence            578999988888884


No 308
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=20.08  E-value=88  Score=14.95  Aligned_cols=16  Identities=19%  Similarity=0.449  Sum_probs=12.6

Q ss_pred             HHHHHHHHHHHhCCCC
Q 041080          162 WSLGCTVLEMLTRRPP  177 (247)
Q Consensus       162 ~slG~ll~~l~~g~~p  177 (247)
                      -.+|++.+.++.+.+|
T Consensus        12 ~tlgiiFFAI~FRePP   27 (32)
T 3arc_T           12 CIIALFFFAIFFREPP   27 (32)
T ss_dssp             HHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHhhhhcCCC
Confidence            3578998888887776


Done!