Citrus Sinensis ID: 041080

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQTPRCGQANC
cccEEEEEEECccccccccHHHHHHHHHHHHHHcccccccccEEEEEEECccEEEEEEEEcccccHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccEEEcccccEEECccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccHHHHHccccccccccccccccccc
DGFFFAVKEVS***********ILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPF***************
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DGFFFAVKEVSLQDQGAQGKQSILQLEQEISLLSQFEQDNIVQYLGTDKDENRLYIFLELVTKGSLANLYQKYHLSDSQVSSYTRQILNGLVYLHERNVVHRDIKCANILVDASGSVKLADFGLAKATTMNDLKSCKGTPFWMAPEVVNSKNDGYGLTADIWSLGCTVLEMLTRRPPYSHLEGVQALFRIGKGELPSVPSSLSRDARDFILKCLQVNPNDRPTVTELMEHPFVKRPLQTPRCGQANC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Mitogen-activated protein kinase kinase kinase 1 Involved in the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6) downstream of bacterial flagellin receptor FLS2. May be involved in the cold and salinity stress-mediated MAP kinase signaling cascade (MEKK1, MEK1/MKK2 and MPK4/MPK6). Activates downstream MKK2, MKK4 and MKK5.probableQ39008

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FDN, chain A
Confidence level:very confident
Coverage over the Query: 1-243
View the alignment between query and template
View the model in PyMOL