BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041082
(639 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 191/408 (46%), Gaps = 57/408 (13%)
Query: 45 VSCDV---RSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSS 101
+S DV R + L++S + ++ IP LG+ S+LQ LD+S N SG +I +
Sbjct: 187 ISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTE 245
Query: 102 LLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXT 161
L + ++N G IP L L+ L L N TG
Sbjct: 246 LKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG----------------------- 280
Query: 162 DVQIPN--------LENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIP-NTFGN 212
+IP+ L L L GN+F GA+P F + S L L L N+F +P +T
Sbjct: 281 --EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLK 338
Query: 213 LINLKRLNLYDNYLTSSTPE---------LSFLYSLSN------CKYLEQSSQSLEVFSM 257
+ LK L+L N + PE L+ S +N + +L+ +
Sbjct: 339 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 398
Query: 258 FNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYE 317
N +G I +SN + L +++L+ N L+G+IP +L L KL+ L N LEG IP E
Sbjct: 399 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 458
Query: 318 FCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNL 377
+ +L L L N L+G IP+ N T+L +SL +N+L IP + L+++ L L
Sbjct: 459 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 518
Query: 378 SSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAV 425
S+N F +P E+G+ + L+ +DL+ N F+ G+I A + K+A
Sbjct: 519 SNNSFSGNIPAELGDCRSLIWLDLNTNLFN--GTIPAAMFKQSGKIAA 564
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 152/347 (43%), Gaps = 37/347 (10%)
Query: 63 SLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGN 122
T IP L N S L +L LSFN+ SG+IPSS+ ++S L + N L GEIP+EL
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 123 LAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLLLWGNNFSGAI 182
+ LETL L N LTG NL + L N +G I
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLS------------------NCTNLNWISLSNNRLTGEI 503
Query: 183 PHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYS---- 238
P +I L+IL+L NSF IP G+ +L L+L N + P F S
Sbjct: 504 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 563
Query: 239 ---LSNCKYLEQSSQSLEVFSMFNCNISGGIL-------EEISNLTNLTAIYLAGNKLNG 288
++ +Y+ + ++ C+ +G +L E+++ L+ + G
Sbjct: 564 ANFIAGKRYVYIKNDGMKK----ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGG 619
Query: 289 SIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSL 348
T + L N L G IP E + L+ L+L N +SGSIP G+ L
Sbjct: 620 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 679
Query: 349 RILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKV 395
IL L SNKL IP + L + ++LS+N P+P E+G +
Sbjct: 680 NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFET 725
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 50/396 (12%)
Query: 25 PTNFLAKNWNTSSTVCHWTGVSCDVRSYRVTTLNISGLSLT---STIPSELGNLSSLQTL 81
P L +W+++ C + GV+C R +VT++++S L S + S L +L+ L++L
Sbjct: 22 PDKNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 79
Query: 82 DLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPE--ELGNLAELETLWLQNNFLTGT 139
LS + +GS+ S +SL S+ + N+L G + LG+ + L+ L + +N L
Sbjct: 80 FLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD-- 136
Query: 140 XXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLLLWGNNFSGA-IPHFIFN--ASKLSILE 196
+++ +LE L L N+ SGA + ++ + +L L
Sbjct: 137 ---------------FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA 181
Query: 197 LQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFS 256
+ N + +NL+ L++ N ++ P FL S ++L+ S L
Sbjct: 182 ISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP---FLGDCSALQHLDISGNKL---- 232
Query: 257 MFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPY 316
SG IS T L + ++ N+ G IP L+ LQ LS +NK G IP
Sbjct: 233 ------SGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIP- 283
Query: 317 EFCRLA--SLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIP-STLWNLKDIL 373
+F A +L LDLSGN G++P FG+ + L L+L SN +P TL ++ +
Sbjct: 284 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 343
Query: 374 YLNLSSNFFISPLPLEIGNLKV-LVGIDLSMNNFSG 408
L+LS N F LP + NL L+ +DLS NNFSG
Sbjct: 344 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 379
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 41/264 (15%)
Query: 17 LKGHVTDDPTNFLAKNW------NTSSTVCHWTGVSCDVRSYRVTTLNISGLSLTSTIPS 70
L G + +N NW + + W G R + L +S S + IP+
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-----RLENLAILKLSNNSFSGNIPA 529
Query: 71 ELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLS---------IYFNNNTLFGEIPEELG 121
ELG+ SL LDL+ N F+G+IP+++F S ++ +Y N+ + E G
Sbjct: 530 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC-HGAG 588
Query: 122 NLAELETLWLQN-NFLTGTXXXXXXXXXXXXXXXXXXXXXTDV----------------- 163
NL E + + + N L+ +
Sbjct: 589 NLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE 648
Query: 164 --QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNL 221
+P L L L N+ SG+IP + + L+IL+L N IP L L ++L
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708
Query: 222 YDNYLTSSTPELSFLYSLSNCKYL 245
+N L+ PE+ + K+L
Sbjct: 709 SNNNLSGPIPEMGQFETFPPAKFL 732
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 191/408 (46%), Gaps = 57/408 (13%)
Query: 45 VSCDV---RSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSS 101
+S DV R + L++S + ++ IP LG+ S+LQ LD+S N SG +I +
Sbjct: 190 ISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTE 248
Query: 102 LLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXT 161
L + ++N G IP L L+ L L N TG
Sbjct: 249 LKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTG----------------------- 283
Query: 162 DVQIPN--------LENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIP-NTFGN 212
+IP+ L L L GN+F GA+P F + S L L L N+F +P +T
Sbjct: 284 --EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLK 341
Query: 213 LINLKRLNLYDNYLTSSTPE---------LSFLYSLSN------CKYLEQSSQSLEVFSM 257
+ LK L+L N + PE L+ S +N + +L+ +
Sbjct: 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401
Query: 258 FNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYE 317
N +G I +SN + L +++L+ N L+G+IP +L L KL+ L N LEG IP E
Sbjct: 402 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 461
Query: 318 FCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNL 377
+ +L L L N L+G IP+ N T+L +SL +N+L IP + L+++ L L
Sbjct: 462 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKL 521
Query: 378 SSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAV 425
S+N F +P E+G+ + L+ +DL+ N F+ G+I A + K+A
Sbjct: 522 SNNSFSGNIPAELGDCRSLIWLDLNTNLFN--GTIPAAMFKQSGKIAA 567
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 152/345 (44%), Gaps = 37/345 (10%)
Query: 65 TSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLA 124
T IP L N S L +L LSFN+ SG+IPSS+ ++S L + N L GEIP+EL +
Sbjct: 407 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 466
Query: 125 ELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLLLWGNNFSGAIPH 184
LETL L N LTG NL + L N +G IP
Sbjct: 467 TLETLILDFNDLTGEIPSGLS------------------NCTNLNWISLSNNRLTGEIPK 508
Query: 185 FIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYS------ 238
+I L+IL+L NSF IP G+ +L L+L N + P F S
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 239 -LSNCKYLEQSSQSLEVFSMFNCNISGGIL-------EEISNLTNLTAIYLAGNKLNGSI 290
++ +Y+ + ++ C+ +G +L E+++ L+ + G
Sbjct: 569 FIAGKRYVYIKNDGMKK----ECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 624
Query: 291 PITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRI 350
T + L N L G IP E + L+ L+L N +SGSIP G+ L I
Sbjct: 625 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684
Query: 351 LSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKV 395
L L SNKL IP + L + ++LS+N P+P E+G +
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFET 728
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 50/396 (12%)
Query: 25 PTNFLAKNWNTSSTVCHWTGVSCDVRSYRVTTLNISGLSLT---STIPSELGNLSSLQTL 81
P L +W+++ C + GV+C R +VT++++S L S + S L +L+ L++L
Sbjct: 25 PDKNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82
Query: 82 DLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPE--ELGNLAELETLWLQNNFLTGT 139
LS + +GS+ S +SL S+ + N+L G + LG+ + L+ L + +N L
Sbjct: 83 FLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD-- 139
Query: 140 XXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLLLWGNNFSGA-IPHFIFN--ASKLSILE 196
+++ +LE L L N+ SGA + ++ + +L L
Sbjct: 140 ---------------FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA 184
Query: 197 LQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFS 256
+ N + +NL+ L++ N ++ P FL S ++L+ S L
Sbjct: 185 ISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP---FLGDCSALQHLDISGNKL---- 235
Query: 257 MFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPY 316
SG IS T L + ++ N+ G IP L+ LQ LS +NK G IP
Sbjct: 236 ------SGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIP- 286
Query: 317 EFCRLA--SLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIP-STLWNLKDIL 373
+F A +L LDLSGN G++P FG+ + L L+L SN +P TL ++ +
Sbjct: 287 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346
Query: 374 YLNLSSNFFISPLPLEIGNLKV-LVGIDLSMNNFSG 408
L+LS N F LP + NL L+ +DLS NNFSG
Sbjct: 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 41/264 (15%)
Query: 17 LKGHVTDDPTNFLAKNW------NTSSTVCHWTGVSCDVRSYRVTTLNISGLSLTSTIPS 70
L G + +N NW + + W G R + L +S S + IP+
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-----RLENLAILKLSNNSFSGNIPA 532
Query: 71 ELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLS---------IYFNNNTLFGEIPEELG 121
ELG+ SL LDL+ N F+G+IP+++F S ++ +Y N+ + E G
Sbjct: 533 ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC-HGAG 591
Query: 122 NLAELETLWLQN-NFLTGTXXXXXXXXXXXXXXXXXXXXXTDV----------------- 163
NL E + + + N L+ +
Sbjct: 592 NLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE 651
Query: 164 --QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNL 221
+P L L L N+ SG+IP + + L+IL+L N IP L L ++L
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 222 YDNYLTSSTPELSFLYSLSNCKYL 245
+N L+ PE+ + K+L
Sbjct: 712 SNNNLSGPIPEMGQFETFPPAKFL 735
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 122/317 (38%), Gaps = 74/317 (23%)
Query: 378 SSNFFISPLP----LEIGNLKV--LVGIDLSMNNFS--------GFGSIYKARIQDGMKV 423
+FF P + +G LK L + ++ +NFS GFG +YK R+ DG V
Sbjct: 6 QDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV 65
Query: 424 AVKVF--------DLQYERAFKSFDVACDM-------------MKKLVLEYMPHGSLEKC 462
AVK +LQ++ + +A + LV YM +GS+ C
Sbjct: 66 AVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC 125
Query: 463 LYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSD 519
L S LD +R I + A L YLH IIH D+K +N+LL A + D
Sbjct: 126 LRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 185
Query: 520 FGMAKLLLKEDQSFTQNTNTCHHRIY------GTRRNPQMNFFSGEMTLK---------- 563
FG+AKL+ +D I G F G M L+
Sbjct: 186 FGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 245
Query: 564 ------------SWVNDLLPISVMEV-VDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAE 610
WV LL +E VDV+L K + + + +A+ CT
Sbjct: 246 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG------NYKDEEVEQLIQVALLCTQS 299
Query: 611 SPKQRINAKESVTRLLK 627
SP +R E V R+L+
Sbjct: 300 SPMERPKMSE-VVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 106/274 (38%), Gaps = 60/274 (21%)
Query: 407 SGFGSIYKARIQDGMKVAVKVF--------DLQYERAFKSFDVACDM------------- 445
GFG +YK R+ DG VAVK +LQ++ + +A
Sbjct: 41 GGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 100
Query: 446 MKKLVLEYMPHGSLEKCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL 502
+ LV YM +GS+ CL S LD +R I + A L YLH IIH D+
Sbjct: 101 ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDV 160
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIY------GTRRNPQMNFF 556
K +N+LL A + DFG+AKL+ +D I G F
Sbjct: 161 KAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFG 220
Query: 557 SGEMTLK----------------------SWVNDLLPISVME-VVDVNLLSMEDKYFTTK 593
G M L+ WV LL +E +VDV+L K
Sbjct: 221 YGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG------NYK 274
Query: 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRLLK 627
+ + + +A+ CT SP +R E V R+L+
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSE-VVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 34/168 (20%)
Query: 396 LVGIDLSMNNFSG--------FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVA----- 442
LV ++ + NNF FG +YK ++DG KVA+K + + + F+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 443 -------------CDMMKKLVL--EYMPHGSLEKCLYSSN---YILDIFQRLNIMIDVAL 484
CD +++L +YM +G+L++ LY S+ + QRL I I A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS 532
L YLH + IIH D+K N+LL N V ++DFG++K + DQ+
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT 195
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 34/160 (21%)
Query: 396 LVGIDLSMNNFSG--------FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVA----- 442
LV ++ + NNF FG +YK ++DG KVA+K + + + F+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 443 -------------CDMMKKLVL--EYMPHGSLEKCLYSSN---YILDIFQRLNIMIDVAL 484
CD +++L +YM +G+L++ LY S+ + QRL I I A
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L YLH + IIH D+K N+LL N V ++DFG++K
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 261 NISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCR 320
N+ G I I+ LT L +Y+ ++G+IP L +++ L L F N L G +P
Sbjct: 88 NLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
Query: 321 LASLYELDLSGNKLSGSIPTCFGNQTSL-RILSLDSNKLISIIPSTLWNLKDILYLNLSS 379
L +L + GN++SG+IP +G+ + L +++ N+L IP T NL ++ +++LS
Sbjct: 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSR 206
Query: 380 NFFISPLPLEIGNLKVLVGID 400
N LE G+ VL G D
Sbjct: 207 NM------LE-GDASVLFGSD 220
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 266 ILEEISNLTNLTAIYLAG-NKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASL 324
I ++NL L +Y+ G N L G IP + KL +L L + G IP ++ +L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 325 YELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILY-LNLSSNFFI 383
LD S N LSG++P + +L ++ D N++ IP + + + + +S N
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 384 SPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVK----VFDLQYERAFKSF 439
+P NL L +DLS N G S+ ++ K+ + FDL K+
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 440 DVACDMMKKLVLEYMPHG 457
+ D+ + +P G
Sbjct: 247 N-GLDLRNNRIYGTLPQG 263
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 141/347 (40%), Gaps = 99/347 (28%)
Query: 33 WNTSSTVCH--WTGVSCDV--RSYRVTTLNISGLSLTST--IPSELGNL----------- 75
W ++ C+ W GV CD ++YRV L++SGL+L IPS L NL
Sbjct: 27 WLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGI 86
Query: 76 --------------SSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELG 121
+ L L ++ SG+IP + + +L+++ F+ N L G +P +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 122 NLAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLLLWGNNFSGA 181
+L PNL + GN SGA
Sbjct: 147 SL------------------------------------------PNLVGITFDGNRISGA 164
Query: 182 IPHFIFNASKL-SILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLY-SL 239
IP + SKL + + + +N IP TF NL NL ++L N L + S L+ S
Sbjct: 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEG---DASVLFGSD 220
Query: 240 SNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQK 299
N + + + SL F + +S NL + L N++ G++P L +L+
Sbjct: 221 KNTQKIHLAKNSL-AFDLGKVGLS----------KNLNGLDLRNNRIYGTLPQGLTQLKF 269
Query: 300 LQLLSFVDNKLEGPIPYEFCRLASLYELDLSG---NK-LSGS-IPTC 341
L L+ N L G IP + +L D+S NK L GS +P C
Sbjct: 270 LHSLNVSFNNLCGEIP----QGGNLQRFDVSAYANNKCLCGSPLPAC 312
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 28/142 (19%)
Query: 409 FGSIYKARIQDGMKVAVKVF---DLQYERAFKSFDVACDMMKKL---------------- 449
FG++++A G VAVK+ D ER F +MK+L
Sbjct: 50 FGTVHRAEWH-GSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107
Query: 450 ----VLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
V EY+ GSL + L+ S LD +RL++ DVA + YLH + PI+H DLK
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRDLK 166
Query: 504 LSNVLLGNNMVAHLSDFGMAKL 525
N+L+ + DFG+++L
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 28/142 (19%)
Query: 409 FGSIYKARIQDGMKVAVKVF---DLQYERAFKSFDVACDMMKKL---------------- 449
FG++++A G VAVK+ D ER F +MK+L
Sbjct: 50 FGTVHRAEWH-GSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107
Query: 450 ----VLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
V EY+ GSL + L+ S LD +RL++ DVA + YLH + PI+H +LK
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLK 166
Query: 504 LSNVLLGNNMVAHLSDFGMAKL 525
N+L+ + DFG+++L
Sbjct: 167 SPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV E+M HG L L + + L + +DV + YL +IH DL N L
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCL 135
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+G N V +SDFGM + +L D +T +T T
Sbjct: 136 VGENQVIKVSDFGMTRFVL--DDQYTSSTGT 164
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV E+M HG L L + + L + +DV + YL +IH DL N L
Sbjct: 82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCL 138
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+G N V +SDFGM + +L D +T +T T
Sbjct: 139 VGENQVIKVSDFGMTRFVL--DDQYTSSTGT 167
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV E+M HG L L + + L + +DV + YL +IH DL N L
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCL 135
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+G N V +SDFGM + +L D +T +T T
Sbjct: 136 VGENQVIKVSDFGMTRFVL--DDQYTSSTGT 164
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV E+M HG L L + + L + +DV + YL +IH DL N L
Sbjct: 77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCL 133
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+G N V +SDFGM + +L D +T +T T
Sbjct: 134 VGENQVIKVSDFGMTRFVL--DDQYTSSTGT 162
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV E+M HG L L + + L + +DV + YL +IH DL N L
Sbjct: 99 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCL 155
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+G N V +SDFGM + +L D +T +T T
Sbjct: 156 VGENQVIKVSDFGMTRFVL--DDQYTSSTGT 184
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV E+M HG L L + + L + +DV + YL +IH DL N L
Sbjct: 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCL 136
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+G N V +SDFGM + +L D +T +T T
Sbjct: 137 VGENQVIKVSDFGMTRFVL--DDQYTSSTGT 165
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 87/216 (40%), Gaps = 49/216 (22%)
Query: 376 NLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVK----VFDLQ 431
N+++NF P+ +G K+ G GFG +YK + + VAVK + D+
Sbjct: 22 NVTNNF--DERPISVGGNKMGEG---------GFGVVYKGYVNN-TTVAVKKLAAMVDIT 69
Query: 432 YERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEK---CLYSSNY 468
E + FD +M K LV YMP+GSL CL
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTP 128
Query: 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528
L R I A + +LH + IH D+K +N+LL A +SDFG+A+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA--- 182
Query: 529 EDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKS 564
+ F Q RI GT GE+T KS
Sbjct: 183 -SEKFAQTVMXS--RIVGTTAYMAPEALRGEITPKS 215
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 87/216 (40%), Gaps = 49/216 (22%)
Query: 376 NLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVK----VFDLQ 431
N+++NF P+ +G K+ G GFG +YK + + VAVK + D+
Sbjct: 22 NVTNNF--DERPISVGGNKMGEG---------GFGVVYKGYVNN-TTVAVKKLAAMVDIT 69
Query: 432 YERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEK---CLYSSNY 468
E + FD +M K LV YMP+GSL CL
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTP 128
Query: 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528
L R I A + +LH + IH D+K +N+LL A +SDFG+A+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA--- 182
Query: 529 EDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKS 564
+ F Q RI GT GE+T KS
Sbjct: 183 -SEKFAQ--TVMXXRIVGTTAYMAPEALRGEITPKS 215
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 87/216 (40%), Gaps = 49/216 (22%)
Query: 376 NLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVK----VFDLQ 431
N+++NF P+ +G K+ G GFG +YK + + VAVK + D+
Sbjct: 16 NVTNNF--DERPISVGGNKMGEG---------GFGVVYKGYVNN-TTVAVKKLAAMVDIT 63
Query: 432 YERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEK---CLYSSNY 468
E + FD +M K LV YMP+GSL CL
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTP 122
Query: 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528
L R I A + +LH + IH D+K +N+LL A +SDFG+A+
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA--- 176
Query: 529 EDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKS 564
+ F Q RI GT GE+T KS
Sbjct: 177 -SEKFAQ--XVMXXRIVGTTAYMAPEALRGEITPKS 209
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 30/152 (19%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 23 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 82
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF 533
L N+L+ N + DFG+ K+L ++ + F
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEFF 171
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG+A++L + ++
Sbjct: 179 LINSNLVCKVSDFGLARVLEDDPEA 203
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + I Q + ++ V + YL GY +H DL NV
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNV 182
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
L+ +N+V +SDFG++++L ED T T
Sbjct: 183 LVDSNLVCKVSDFGLSRVL--EDDPDAAXTTT 212
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + I Q + ++ V + YL GY +H DL NV
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNV 182
Query: 508 LLGNNMVAHLSDFGMAKLLLKE-DQSFT 534
L+ +N+V +SDFG++++L + D ++T
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 41 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 100
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 101 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 157
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 54 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 113
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 114 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 170
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 171 LATRNILVENENRVKIGDFGLTKVLPQDKE 200
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 28 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 87
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 88 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 144
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 145 LATRNILVENENRVKIGDFGLTKVLPQDKE 174
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 26 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 86 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 41 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 100
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 101 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 157
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 158 LATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 111 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 166
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 167 LINSNLVCKVSDFGLSRVLEDDPEA 191
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 23 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 82
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 30 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 89
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 90 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 146
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 147 LATRNILVENENRVKIGDFGLTKVLPQDKE 176
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 319 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYT 419
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 94 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 149
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 150 LINSNLVCKVSDFGLSRVLEDDPEA 174
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 23 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 82
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 83 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 139
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 22 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 81
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 82 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 138
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 139 LATRNILVENENRVKIGDFGLTKVLPQDKE 168
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 27 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 86
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 87 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 143
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 144 LATRNILVENENRVKIGDFGLTKVLPQDKE 173
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 21 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 80
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 81 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 137
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 138 LATRNILVENENRVKIGDFGLTKVLPQDKE 167
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 36/234 (15%)
Query: 415 ARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-KLVLEYMPHGSLEKCLYS-------- 465
A +D + A + +LQ+E K + V D +V EYM HG L K L +
Sbjct: 59 AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMIL 118
Query: 466 -------SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLS 518
+ L + Q L+I +A + YL S +H DL N L+G N++ +
Sbjct: 119 VDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIG 175
Query: 519 DFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKS--WVNDLL------ 570
DFGM++ D T H + R P + + T +S W ++
Sbjct: 176 DFGMSR-----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
Query: 571 ----PISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKE 620
P + +V + + + C V+++ + C P+QR+N KE
Sbjct: 231 YGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE 284
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 26 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L + +D + L + +EYL + IH D
Sbjct: 86 AGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEA 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG+ ++L + ++
Sbjct: 179 LINSNLVCKVSDFGLGRVLEDDPEA 203
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 29 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 88
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH D
Sbjct: 89 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 145
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 146 LATRNILVENENRVKIGDFGLTKVLPQDKE 175
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEA 203
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEA 203
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEA 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 236 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYT 336
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 121 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 176
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 177 LINSNLVCKVSDFGLSRVLEDDPEA 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V+EYM GSL L L + Q +++ +A + Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 175
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 236 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYT 336
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 38/246 (15%)
Query: 407 SGFGSIYKAR-IQDGMKVAVKVF---DLQYE----RAFKSFDVACDMM------------ 446
GFG ++K R ++D VA+K D + E F+ F +M
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 447 ------KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHC 500
++V+E++P G L L + + +L +M+D+AL +EY+ + PI+H
Sbjct: 90 GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHR 148
Query: 501 DLKLSNVLLGN-----NMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRN---PQ 552
DL+ N+ L + + A ++DFG+++ + N G +
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 553 MNFFSGEMTLKSWVNDLLPI---SVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTA 609
+ +S M L + + P S ++ +N++ E T + C + N+ C +
Sbjct: 209 ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 610 ESPKQR 615
PK+R
Sbjct: 269 GDPKKR 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 63 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 122
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 168
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 67/261 (25%)
Query: 409 FGSIYKARI--QDG--MKVAVKVFD------------LQYERAFKSFD-------VACDM 445
FGS+ +A++ +DG +KVAVK+ L+ K FD V +
Sbjct: 36 FGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95
Query: 446 MKK---------LVLEYMPHGSLEKCLYSSN-----YILDIFQRLNIMIDVALALEYLHF 491
+ ++L +M HG L L +S + L + + M+D+A +EYL
Sbjct: 96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS- 154
Query: 492 GYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED-----------------QSFT 534
S IH DL N +L +M ++DFG+++ + D +S
Sbjct: 155 --SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA 212
Query: 535 QNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594
N T H ++ G + P + +E ++ +
Sbjct: 213 DNLYTVHSDVWAF----------GVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPP 262
Query: 595 QCLSFVFNLAMECTAESPKQR 615
+C+ V++L +C + PKQR
Sbjct: 263 ECMEEVYDLMYQCWSADPKQR 283
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 236 LRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYT 336
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 30/150 (20%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 26 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++E++P+GSL + L +D + L + +EYL + IH D
Sbjct: 86 AGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
L N+L+ N + DFG+ K+L ++ +
Sbjct: 143 LATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
++ EYM +G+L+K L + + Q + ++ +A ++YL + Y +H DL N+
Sbjct: 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L+ +N+V +SDFG+++ +L++D T T+
Sbjct: 179 LVNSNLVCKVSDFGLSR-VLEDDPEATYTTS 208
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L L + Q +++ +A + Y
Sbjct: 59 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 118
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 119 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 164
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L L + Q +++ +A + Y
Sbjct: 61 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 120
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 166
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L L + Q +++ +A + Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 175
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 84/216 (38%), Gaps = 49/216 (22%)
Query: 376 NLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVK----VFDLQ 431
N+++NF P+ +G K G GFG +YK + + VAVK + D+
Sbjct: 13 NVTNNF--DERPISVGGNKXGEG---------GFGVVYKGYVNN-TTVAVKKLAAMVDIT 60
Query: 432 YERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEK---CLYSSNY 468
E + FD + K LV Y P+GSL CL
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL-DGTP 119
Query: 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528
L R I A + +LH + IH D+K +N+LL A +SDFG+A+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA--- 173
Query: 529 EDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKS 564
+ F Q RI GT GE+T KS
Sbjct: 174 -SEKFAQXVXXS--RIVGTTAYXAPEALRGEITPKS 206
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 30/152 (19%)
Query: 409 FGSIYKAR---IQD--GMKVAVKVFDLQYERAFKSFDVACDMMK---------------- 447
FGS+ R +QD G VAVK E + F+ +++K
Sbjct: 24 FGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS 83
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
KL++EY+P+GSL L +D + L + +EYL + IH +
Sbjct: 84 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRN 140
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF 533
L N+L+ N + DFG+ K+L ++ + +
Sbjct: 141 LATRNILVENENRVKIGDFGLTKVLPQDKEYY 172
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L L + Q +++ +A + Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 175
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 60 LRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +H DL+ +N+L+G N+V ++DFG+A+L+ + + Q
Sbjct: 120 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 166
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 407 SGFGSIYKAR-IQDGMKVAVKVF---DLQYE----RAFKSFDVACDMM------------ 446
GFG ++K R ++D VA+K D + E F+ F +M
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 447 ------KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHC 500
++V+E++P G L L + + +L +M+D+AL +EY+ + PI+H
Sbjct: 90 GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHR 148
Query: 501 DLKLSNVLLGN-----NMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRN---PQ 552
DL+ N+ L + + A ++DFG ++ + N G +
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 553 MNFFSGEMTLKSWVNDLLPI---SVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTA 609
+ +S M L + + P S ++ +N++ E T + C + N+ C +
Sbjct: 209 ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 610 ESPKQR 615
PK+R
Sbjct: 269 GDPKKR 274
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L + + Q + ++ +A ++YL G+ +H DL N+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGF----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEA 203
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V+EYM GSL L L + Q +++ +A + Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +H DL+ +N+L+G N+V ++DFG+A+L+ + + Q
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 176
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 98/249 (39%), Gaps = 19/249 (7%)
Query: 181 AIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLS 240
AIP I +K L+LQ N L F L L+ L L DN L T L
Sbjct: 30 AIPSNIPADTK--KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL--QTLPAGIFKELK 85
Query: 241 NCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKL 300
N + L + L+ + G+ ++ L NL + L N+L P L KL
Sbjct: 86 NLETLWVTDNKLQALPI-------GVFDQ---LVNLAELRLDRNQLKSLPPRVFDSLTKL 135
Query: 301 QLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLIS 360
LS N+L+ F +L SL EL L N+L F T L+ L LD+N+L
Sbjct: 136 TYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR 195
Query: 361 IIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDG 420
+ +L+ + L L N + N + + L G G + A + G
Sbjct: 196 VPEGAFDSLEKLKMLQLQENPWDC-----TCNGIIYMAKWLKKKADEGLGGVDTAGCEKG 250
Query: 421 MKVAVKVFD 429
K +++ +
Sbjct: 251 GKAVLEITE 259
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Query: 37 STVCHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSI 96
+C G C + + +++ S LT+ IPS + + + LDL N S S+PS
Sbjct: 2 EALCKKDGGVCSCNNNK-NSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLS-SLPSKA 56
Query: 97 FN-MSSLLSIYFNNN---TLFGEIPEELGNLAELETLWLQNNFLTGTXXXXXXXXXXXXX 152
F+ ++ L +Y N+N TL I +EL N LETLW+ +N L
Sbjct: 57 FHRLTKLRLLYLNDNKLQTLPAGIFKELKN---LETLWVTDNKLQALPIGVFD------- 106
Query: 153 XXXXXXXXTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGN 212
Q+ NL L L N P + +KL+ L L N L F
Sbjct: 107 -----------QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155
Query: 213 LINLKRLNLYDNYLTSSTPELSF 235
L +LK L LY+N L PE +F
Sbjct: 156 LTSLKELRLYNNQL-KRVPEGAF 177
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 63 SLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFN-MSSLLSIYFNNNTLFGEIPE-EL 120
L S P +L+ L L L +N S+P +F+ ++SL + NN L +PE
Sbjct: 120 QLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL-KRVPEGAF 177
Query: 121 GNLAELETLWLQNNFL 136
L EL+TL L NN L
Sbjct: 178 DKLTELKTLKLDNNQL 193
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 67 LRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYT 167
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L L + Q +++ +A + Y
Sbjct: 237 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 296
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ +H DL+ +N+L+G N+V ++DFG+ +L+ ED +T
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYT 337
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V EYM +GSL+ L ++ + Q + ++ ++ ++YL GY +H DL N+
Sbjct: 100 IVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY----VHRDLAARNI 155
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 156 LINSNLVCKVSDFGLSRVLEDDPEA 180
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V+EYM G L L L + Q +++ +A + Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 175
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
+++E+ + + V + +V EYM GSL L L + Q +++ +A + Y
Sbjct: 70 IRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 175
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 409 FGSIYKARIQDGMKVAV-KVFDLQYERAFKSFDVACDMMKK------------------- 448
FG++YK + + V + KV D E+ F++F +++K
Sbjct: 49 FGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFMGYMTKDNLA 107
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V ++ SL K L+ +FQ ++I A ++YLH + IIH D+K +N+
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIF 164
Query: 509 LGNNMVAHLSDFGMA 523
L + + DFG+A
Sbjct: 165 LHEGLTVKIGDFGLA 179
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L + L + Q +++ +A + Y
Sbjct: 67 LRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEWT 167
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 46/241 (19%)
Query: 409 FGSIYKARIQDGMKVAVKVFD------------------LQYERAFKSFDVACDMMKKLV 450
FG ++ A KVAVK LQ+++ K V ++
Sbjct: 28 FGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 87
Query: 451 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALAL-EYLHFGYSTPIIHCDLKLSNVLL 509
E+M GSL L S Q L +ID + + E + F IH DL+ +N+L+
Sbjct: 88 TEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 144
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKS--WVN 567
++V ++DFG+A+++ ED +T + +NF G T+KS W
Sbjct: 145 SASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPE--AINF--GSFTIKSDVWSF 198
Query: 568 DLLPISVMEVVDVN------------LLSMEDKYFTTKKQ-CLSFVFNLAMECTAESPKQ 614
+L +ME+V + ++E Y + + C ++N+ M C P++
Sbjct: 199 GIL---LMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEE 255
Query: 615 R 615
R
Sbjct: 256 R 256
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 409 FGSIYKARIQDGMKVAVKVFD------------------LQYERAFKSFDVACDMMKKLV 450
FG ++ A KVAVK LQ+++ K V ++
Sbjct: 201 FGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 260
Query: 451 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALAL-EYLHFGYSTPIIHCDLKLSNVLL 509
E+M GSL L S Q L +ID + + E + F IH DL+ +N+L+
Sbjct: 261 TEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 317
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQ-MNFFSGEMTLKS--WV 566
++V ++DFG+A+++ ED +T I T P+ +NF G T+KS W
Sbjct: 318 SASLVCKIADFGLARVI--EDNEYTAREG-AKFPIKWT--APEAINF--GSFTIKSDVWS 370
Query: 567 NDLLPISVMEVVDVN------------LLSMEDKYFTTKKQ-CLSFVFNLAMECTAESPK 613
+L +ME+V + ++E Y + + C ++N+ M C P+
Sbjct: 371 FGIL---LMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPE 427
Query: 614 QR 615
+R
Sbjct: 428 ER 429
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM GSL L L + Q +++ +A + Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 175
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +GSL+ L ++ + Q + ++ + ++YL +H DL N+L
Sbjct: 107 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNIL 163
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQS 532
+ +N+V +SDFGM+++L + ++
Sbjct: 164 VNSNLVCKVSDFGMSRVLEDDPEA 187
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V+E+M +G+L+ L + + Q + ++ +A + YL GY +H DL N+
Sbjct: 121 IVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY----VHRDLAARNI 176
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L+ +N+V +SDFG+++++ + ++ T
Sbjct: 177 LVNSNLVCKVSDFGLSRVIEDDPEAVYTTTG 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V E M +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 94 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 149
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 150 LINSNLVCKVSDFGLSRVLEDDPEA 174
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 45/157 (28%)
Query: 409 FGSIYKARIQ-DGMKVAVKVFDLQYERAFK--------SFDVACDMMKK----------- 448
FG + KARI+ DG+++ + ++ E A K +V C +
Sbjct: 38 FGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 96
Query: 449 ------LVLEYMPHGSLEKCLYSSNYI---------------LDIFQRLNIMIDVALALE 487
L +EY PHG+L L S + L Q L+ DVA ++
Sbjct: 97 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 156
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
YL IH DL N+L+G N VA ++DFG+++
Sbjct: 157 YLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 45/157 (28%)
Query: 409 FGSIYKARIQ-DGMKVAVKVFDLQYERAFK--------SFDVACDMMKK----------- 448
FG + KARI+ DG+++ + ++ E A K +V C +
Sbjct: 28 FGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 86
Query: 449 ------LVLEYMPHGSLEKCLYSSNYI---------------LDIFQRLNIMIDVALALE 487
L +EY PHG+L L S + L Q L+ DVA ++
Sbjct: 87 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 146
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
YL IH DL N+L+G N VA ++DFG+++
Sbjct: 147 YLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 85
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 142
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED +T
Sbjct: 143 SDTLSCKIADFGLARLI--EDNEYT 165
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 31 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 90
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 91 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 147
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED +T
Sbjct: 148 SDTLSCKIADFGLARLI--EDNEYT 170
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 32 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 91
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 92 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 148
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED +T
Sbjct: 149 SDTLSCKIADFGLARLI--EDNEYT 171
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +GSL+ L ++ + Q + ++ + ++YL +H DL N+L
Sbjct: 92 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 148
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQS 532
+ +N+V +SDFGM+++L + ++
Sbjct: 149 VNSNLVCKVSDFGMSRVLEDDPEA 172
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 36 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 95
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 96 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 152
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED +T
Sbjct: 153 SDTLSCKIADFGLARLI--EDNEYT 175
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYL-HFGYSTPIIHCDLKLSNV 507
+V E M +GSL+ L + + Q + ++ +A ++YL GY +H DL N+
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNI 178
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQS 532
L+ +N+V +SDFG++++L + ++
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEA 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVALALEY 488
L++E+ + + V + +V EYM G L L L + Q +++ +A + Y
Sbjct: 70 LRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ +H DL+ +N+L+G N+V ++DFG+A+L+ ED +T
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGA 175
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 21 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 80
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 81 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 137
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED +T
Sbjct: 138 SDTLSCKIADFGLARLI--EDNEYT 160
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 369 LKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSG-FGSIYKARIQDGMKVAVKV 427
LKD++Y +++++ S LPL + + I L + G FG +++ + + G +VAVK+
Sbjct: 3 LKDLIY-DMTTSGSGSGLPLLV-QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKI 59
Query: 428 FDLQYERA-FKSFDVACDMMKK----------------------LVLEYMPHGSLEKCLY 464
F + ER+ F+ ++ +M + LV +Y HGSL Y
Sbjct: 60 FSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD--Y 117
Query: 465 SSNYILDIFQRLNIMIDVALALEYLHFGY-----STPIIHCDLKLSNVLLGNNMVAHLSD 519
+ Y + + + + + A L +LH I H DLK N+L+ N ++D
Sbjct: 118 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 177
Query: 520 FGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
G+A ++ D + +HR+ GT+R
Sbjct: 178 LGLA---VRHDSATDTIDIAPNHRV-GTKR 203
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 369 LKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSG-FGSIYKARIQDGMKVAVKV 427
LKD++Y +++++ S LPL + + I L + G FG +++ + + G +VAVK+
Sbjct: 16 LKDLIY-DMTTSGSGSGLPLLV-QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKI 72
Query: 428 FDLQYERA-FKSFDVACDMMKK----------------------LVLEYMPHGSLEKCLY 464
F + ER+ F+ ++ +M + LV +Y HGSL Y
Sbjct: 73 FSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD--Y 130
Query: 465 SSNYILDIFQRLNIMIDVALALEYLHFGY-----STPIIHCDLKLSNVLLGNNMVAHLSD 519
+ Y + + + + + A L +LH I H DLK N+L+ N ++D
Sbjct: 131 LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190
Query: 520 FGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
G+A ++ D + +HR+ GT+R
Sbjct: 191 LGLA---VRHDSATDTIDIAPNHRV-GTKR 216
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +GSL+ L ++ + Q + ++ + ++YL +H DL N+L
Sbjct: 86 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 142
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQS 532
+ +N+V +SDFGM+++L + ++
Sbjct: 143 VNSNLVCKVSDFGMSRVLEDDPEA 166
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 407 SGFGSIYKAR-IQDGMKVAVKVF-------DLQYERAFKSFDVACDMM------------ 446
GFG ++K R ++D VA+K + + F+ F +M
Sbjct: 30 GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLY 89
Query: 447 ------KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHC 500
++V+E++P G L L + + +L +M+D+AL +EY+ + PI+H
Sbjct: 90 GLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHR 148
Query: 501 DLKLSNVLLGN-----NMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRN---PQ 552
DL+ N+ L + + A ++DF +++ + N G +
Sbjct: 149 DLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 553 MNFFSGEMTLKSWVNDLLPI---SVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTA 609
+ +S M L + + P S ++ +N++ E T + C + N+ C +
Sbjct: 209 ADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWS 268
Query: 610 ESPKQR 615
PK+R
Sbjct: 269 GDPKKR 274
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 30/269 (11%)
Query: 165 IPNLENLLLWGNNFSGAI--PHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLY 222
+ NLE L L N GA+ +F + L +L L+ N+ + P +F +N++R ++
Sbjct: 102 LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF--FLNMRRFHVL 159
Query: 223 D---NYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNL---TNL 276
D N + S E + + L SS +L+ + + E+ N T++
Sbjct: 160 DLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG-----WEKCGNPFKNTSI 214
Query: 277 TAIYLAGNKLNGSIP------ITLCKLQKLQLL-------SFVDNKLEGPIPYEFCRL-- 321
T + L+GN S+ I K+Q L L SF + P + F L
Sbjct: 215 TTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEA 274
Query: 322 ASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNF 381
+ + DLS +K+ + + F + T L L+L N++ I + W L +L LNLS NF
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNF 334
Query: 382 FISPLPLEIGNLKVLVGIDLSMNNFSGFG 410
S NL L +DLS N+ G
Sbjct: 335 LGSIDSRMFENLDKLEVLDLSYNHIRALG 363
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
KL++E++P GSL++ L + +++ Q+L + + ++YL S +H DL NV
Sbjct: 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNV 157
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFT 534
L+ + + DFG+ K + + + T
Sbjct: 158 LVESEHQVKIGDFGLTKAIETDKEXXT 184
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
KL++E++P GSL++ L + +++ Q+L + + ++YL S +H DL NV
Sbjct: 89 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNV 145
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFT 534
L+ + + DFG+ K + + + T
Sbjct: 146 LVESEHQVKIGDFGLTKAIETDKEXXT 172
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E+ G L + L DI +N + +A + YLH PIIH DLK SN+L
Sbjct: 83 LVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140
Query: 509 L------GN--NMVAHLSDFGMAK 524
+ G+ N + ++DFG+A+
Sbjct: 141 ILQKVENGDLSNKILKITDFGLAR 164
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 27 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 86
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 87 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 143
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED T
Sbjct: 144 SDTLSCKIADFGLARLI--EDNEXT 166
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 28 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 87
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 88 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 144
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED T
Sbjct: 145 SDTLSCKIADFGLARLI--EDNEXT 167
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 409 FGSIYKARIQDGMKVAVKVFD------------------LQYERAFKSFDVACDMMKKLV 450
FG ++ KVA+K L++++ + + V + +V
Sbjct: 22 FGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYIV 81
Query: 451 LEYMPHGSLEKCLY-SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM GSL L L + +++ VA + Y+ IH DL+ +N+L+
Sbjct: 82 TEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILV 138
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
GN ++ ++DFG+A+L+ + + Q
Sbjct: 139 GNGLICKIADFGLARLIEDNEXTARQGAK 167
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 85
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 142
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED T
Sbjct: 143 SDTLSCKIADFGLARLI--EDNEXT 165
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 26 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 85
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 142
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED T
Sbjct: 143 SDTLSCKIADFGLARLI--EDNEXT 165
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 34 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 93
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 94 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 150
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED T
Sbjct: 151 SDTLSCKIADFGLARLI--EDNEXT 173
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 32 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 91
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 92 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 148
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED T
Sbjct: 149 SDTLSCKIADFGLARLI--EDNEXT 171
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 35 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 94
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH DL+ +N+L+
Sbjct: 95 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILV 151
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED T
Sbjct: 152 SDTLSCKIADFGLARLI--EDNEXT 174
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 152
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQS 532
+ + V +SDFG+++ +L ++++
Sbjct: 153 VNDQGVVKVSDFGLSRYVLDDEET 176
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 185 FIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSST------PELSFLYS 238
F+F + L+ L+L NS + N F N NL +L+L N L+S+ E
Sbjct: 93 FVF-CTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELL 151
Query: 239 LSNCKYLEQSSQSLEVF---SMFNCNISGGILEEIS-----NLTNLTAIYLAGNKLNGSI 290
L+ K L S+ LE S+ ++S L+E S + L A+ L +LN +
Sbjct: 152 LAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHL 211
Query: 291 PITLC---KLQKLQLLSFVDNKLEGPIPYEFCRL--ASLYELDLSGNKLSGSIPTCFGNQ 345
LC +Q LS +N+L F L +L +LDLS N L F
Sbjct: 212 TEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYL 271
Query: 346 TSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNF 381
SLR LSL+ N + + P + + L ++ YL+L F
Sbjct: 272 PSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAF 307
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 274 TNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYE-LDLSGN 332
+N+T + L N+L P + +L +L N + P E C++ L + L+L N
Sbjct: 25 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEP-ELCQILPLLKVLNLQHN 83
Query: 333 KLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
+LS F T+L L L SN + I + N K+++ L+LS N
Sbjct: 84 ELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHN 131
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 137/350 (39%), Gaps = 68/350 (19%)
Query: 72 LGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPE----ELGNLAELE 127
LGN SSL+ LDLS N P + L ++ NN L + E EL N ++
Sbjct: 168 LGN-SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSN-TSIQ 225
Query: 128 TLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLLLWGNNFSGAIPHFIF 187
L L NN L T + ++ NL L L NN H +
Sbjct: 226 NLSLANNQLLAT----------------SESTFSGLKWTNLTQLDLSYNNL-----HDVG 264
Query: 188 NAS-----KLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YS 238
N S L L L+ N+ L P +F L NL+ L+L + S S +S
Sbjct: 265 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFS 324
Query: 239 LSNCKYLEQSSQSLEVFSMFNCNISGGILE-----------EISNLTNLTAIYLAGNKL- 286
KYLE + N G++ + LTN T + LA + L
Sbjct: 325 FQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLL 384
Query: 287 -------------NGSIPITLCKLQKLQL-LSFVDNKLEGPIPYEFCRLASLYELDLSGN 332
NG+ L +L+ L L L+ ++ KL G E+ L +++E+ LS N
Sbjct: 385 TLNLTKNHISKIANGTFSW-LGQLRILDLGLNEIEQKLSG---QEWRGLRNIFEIYLSYN 440
Query: 333 KLSGSIPTCFGNQTSLRILSLDSNKL--ISIIPSTLWNLKDILYLNLSSN 380
K + F SL+ L L L + I PS L+++ L+LS+N
Sbjct: 441 KYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNN 490
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+ EY+ G+L + S + QR++ D+A + YLH S IIH DL N L
Sbjct: 84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCL 140
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
+ N ++DFG+A+L++ E
Sbjct: 141 VRENKNVVVADFGLARLMVDE 161
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV+EY+P GSL Y + + + Q L + + YLH + IH DL NV
Sbjct: 111 QLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNV 165
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSF 533
LL N+ + + DFG+AK + + + +
Sbjct: 166 LLDNDRLVKIGDFGLAKAVPEGHEXY 191
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 45/157 (28%)
Query: 409 FGSIYKARIQ-DGMKVAVKVFDLQYERAFK--------SFDVACDMMKK----------- 448
FG + KARI+ DG+++ + ++ E A K +V C +
Sbjct: 35 FGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE 93
Query: 449 ------LVLEYMPHGSLEKCLYSSNYI---------------LDIFQRLNIMIDVALALE 487
L +EY PHG+L L S + L Q L+ DVA ++
Sbjct: 94 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 153
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
YL IH +L N+L+G N VA ++DFG+++
Sbjct: 154 YLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N+
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 194
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N+
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 193
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V E M +GSL+ L + + Q + ++ +A ++YL +H DL N+L
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGAVHRDLAARNIL 179
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQS 532
+ +N+V +SDFG++++L + ++
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPEA 203
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVF------------------DLQYERAFKSFDVACDMMKKLV 450
FG ++ KVAVK LQ++R + + V ++
Sbjct: 22 FGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII 81
Query: 451 LEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL 509
EYM +GSL L + + I L I + L++ +A + ++ IH +L+ +N+L+
Sbjct: 82 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILV 138
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFT 534
+ + ++DFG+A+L+ ED +T
Sbjct: 139 SDTLSCKIADFGLARLI--EDNEYT 161
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N+
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS 190
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 400 DLSMNNFSGFGS---IYKAR-IQDGMKVAVKVFDLQ-------YERAFKSFDVACDMMKK 448
D + N G GS +Y+A I G++VA+K+ D + +R + C +
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 449 ----------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFG 492
LVLE +G + + L + + + M + + YLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH-- 129
Query: 493 YSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA-KLLLKEDQSFT 534
S I+H DL LSN+LL NM ++DFG+A +L + ++ +T
Sbjct: 130 -SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 430 LQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEY 488
LQ++R + + V ++ EYM +GSL L + + I L I + L++ +A + +
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
+ IH DL+ +N+L+ + + ++DFG+A+L+ ED T
Sbjct: 125 IE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDAEXT 165
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA 191
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 97/282 (34%), Gaps = 82/282 (29%)
Query: 407 SGFGSIYKARI------QDGMKVAVKVFDLQYERAFKSFDVACDMMKKL----------- 449
FG ++ A QD M VAVK E A + F +++ L
Sbjct: 52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 111
Query: 450 ---------VLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVALAL 486
V EYM HG L + L S + L + Q L + VA +
Sbjct: 112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 171
Query: 487 EYL---HFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
YL HF +H DL N L+G +V + DFGM++ + D ++R
Sbjct: 172 VYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD----------YYR 215
Query: 544 IYGT-----RRNPQMNFFSGEMTLKSWV---------------NDLLPISVMEVVDVNLL 583
+ G R P + + T +S V +S E +D
Sbjct: 216 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC--- 272
Query: 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625
+ + + C V+ + C P+QR + K+ RL
Sbjct: 273 ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 38/169 (22%)
Query: 388 LEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYERAF----------- 436
L++ NLK+L I +G++YK + D VAVKVF + F
Sbjct: 10 LDLDNLKLLELIGRGR-----YGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPL 63
Query: 437 ------KSFDVACDMMKK-------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVA 483
F V + + LV+EY P+GSL K Y S + D + V
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVT 121
Query: 484 LALEYLHF------GYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
L YLH Y I H DL NVL+ N+ +SDFG++ L
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV+EY+P G L L LD + L + +EYL S +H DL N+
Sbjct: 86 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNI 142
Query: 508 LLGNNMVAHLSDFGMAKLL 526
L+ + ++DFG+AKLL
Sbjct: 143 LVESEAHVKIADFGLAKLL 161
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 161 TDVQIPNLENLLLWGN--NFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKR 218
++V +P+LE L L N +F G F + L L+L N + N G L L+
Sbjct: 342 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEH 400
Query: 219 LNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTA 278
L+ + L + E S SL N YL+ S V FN +G L++L
Sbjct: 401 LDFQHSNLKQMS-EFSVFLSLRNLIYLDISHTHTRV--AFNGIFNG--------LSSLEV 449
Query: 279 IYLAGNKLNGS-IPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGS 337
+ +AGN + +P +L+ L L +LE P F L+SL L+++ N+L
Sbjct: 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509
Query: 338 IPTCFGNQTSLRILSLDSN 356
F TSL+ + L +N
Sbjct: 510 PDGIFDRLTSLQKIWLHTN 528
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 16/240 (6%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L V+ L
Sbjct: 54 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 113
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLK 370
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI + L L
Sbjct: 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173
Query: 371 DILYLNLSSNFFISPLP-LEIGNLKVLVGIDLSM-NNFSGFGSIYKARIQD--GMKVAVK 426
+ LNLS + ++P+ ++ G K + L++ NNF ++ K IQ G++V
Sbjct: 174 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSL-NVMKTCIQGLAGLEVHRL 232
Query: 427 VF-DLQYERAFKSFDVACDMMKKLVLEYMPHGSLE--KCLYSSNYILDIFQRLNIMIDVA 483
V + + E + FD K LE + + ++E + Y Y+ DI N + +V+
Sbjct: 233 VLGEFRNEGNLEKFD-------KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVS 285
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
++ ALEYLH IIH DLK N+LL +M ++DFG AK+L E + N
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++EY+ GS L + + D FQ ++ ++ L+YLH S IH D+K +NVL
Sbjct: 98 IIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVL 152
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
L L+DFG+A L D +NT
Sbjct: 153 LSEQGDVKLADFGVAGQLT--DTQIKRNT 179
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ E+M +GSL+ L ++ + Q + ++ +A ++YL +H DL N+L
Sbjct: 111 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNIL 167
Query: 509 LGNNMVAHLSDFGMAKLL 526
+ +N+V +SDFG+++ L
Sbjct: 168 VNSNLVCKVSDFGLSRFL 185
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 81 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 137
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ + V +SDFG+++ +L ++ + ++ +
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDDEYTSSRGSK 167
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFDVACDMMKK------------------- 448
FG +++ + + G +VAVK+F + ER+ F+ ++ +M +
Sbjct: 17 FGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 75
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGY-----STPIIHC 500
LV +Y HGSL Y + Y + + + + + A L +LH I H
Sbjct: 76 QLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 133
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
DLK N+L+ N ++D G+A ++ D + +HR+ GT+R
Sbjct: 134 DLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRV-GTKR 178
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 60/143 (41%), Gaps = 34/143 (23%)
Query: 409 FGSIYKA-RIQDGMKVAVKVF----DLQ--------------------YERAFKSFDVAC 443
+GS+YKA + G VA+K DLQ Y FK+ D+
Sbjct: 42 YGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW- 100
Query: 444 DMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
+V+EY GS+ + N L + I+ LEYLHF IH D+K
Sbjct: 101 -----IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIK 152
Query: 504 LSNVLLGNNMVAHLSDFGMAKLL 526
N+LL A L+DFG+A L
Sbjct: 153 AGNILLNTEGHAKLADFGVAGQL 175
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV+EY+P G L L LD + L + +EYL S +H DL N+
Sbjct: 89 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNI 145
Query: 508 LLGNNMVAHLSDFGMAKLL 526
L+ + ++DFG+AKLL
Sbjct: 146 LVESEAHVKIADFGLAKLL 164
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFDVACDMMKK------------------- 448
FG +++ + + G +VAVK+F + ER+ F+ ++ +M +
Sbjct: 19 FGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 77
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGY-----STPIIHC 500
LV +Y HGSL Y + Y + + + + + A L +LH I H
Sbjct: 78 QLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 135
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
DLK N+L+ N ++D G+A ++ D + +HR+ GT+R
Sbjct: 136 DLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRV-GTKR 180
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 152
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ + V +SDFG+++ +L D +T + +
Sbjct: 153 VNDQGVVKVSDFGLSRYVL--DDEYTSSVGS 181
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFDVACDMMKK------------------- 448
FG +++ + + G +VAVK+F + ER+ F+ ++ +M +
Sbjct: 22 FGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 80
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGY-----STPIIHC 500
LV +Y HGSL Y + Y + + + + + A L +LH I H
Sbjct: 81 QLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 138
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
DLK N+L+ N ++D G+A ++ D + +HR+ GT+R
Sbjct: 139 DLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRV-GTKR 183
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV+EY+P G L L LD + L + +EYL S +H DL N+
Sbjct: 90 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNI 146
Query: 508 LLGNNMVAHLSDFGMAKLL 526
L+ + ++DFG+AKLL
Sbjct: 147 LVESEAHVKIADFGLAKLL 165
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 87 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 143
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ + V +SDFG+++ +L D +T + +
Sbjct: 144 VNDQGVVKVSDFGLSRYVL--DDEYTSSVGS 172
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 80 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 136
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ + V +SDFG+++ +L D +T + +
Sbjct: 137 VNDQGVVKVSDFGLSRYVL--DDEYTSSVGS 165
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV+EY+P G L L LD + L + +EYL S +H DL N+
Sbjct: 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNI 158
Query: 508 LLGNNMVAHLSDFGMAKLL 526
L+ + ++DFG+AKLL
Sbjct: 159 LVESEAHVKIADFGLAKLL 177
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFDVACDMMKK------------------- 448
FG +++ + + G +VAVK+F + ER+ F+ ++ +M +
Sbjct: 16 FGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGY-----STPIIHC 500
LV +Y HGSL Y + Y + + + + + A L +LH I H
Sbjct: 75 QLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
DLK N+L+ N ++D G+A ++ D + +HR+ GT+R
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRV-GTKR 177
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 45 VSCDVRSYR-VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLL 103
+S ++ Y +T L ++G SLT +P+E+ NLS+L+ LDLS N + S+P+ + + L
Sbjct: 239 ISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLK 296
Query: 104 SIYFNNNTLFGEIPEELGNLAELETLWLQNNFL 136
YF +N + +P E GNL L+ L ++ N L
Sbjct: 297 YFYFFDN-MVTTLPWEFGNLCNLQFLGVEGNPL 328
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 186 IFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYL 245
IF L+ L L NS +L P NL NL+ L+L N LTS EL + L KY
Sbjct: 243 IFKYDFLTRLYLNGNSLTEL-PAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQL---KY- 297
Query: 246 EQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSF 305
F F+ N+ + E NL NL + + GN L L + L+ +
Sbjct: 298 ---------FYFFD-NMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFY 347
Query: 306 V-DNKLEGPIPYE 317
+ DN+ E P+P+E
Sbjct: 348 LRDNRPEIPLPHE 360
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 324 LYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI 383
L L L+GN L+ +P N ++LR+L L N+L S +P+ L + + Y N +
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDN-MV 305
Query: 384 SPLPLEIGNL 393
+ LP E GNL
Sbjct: 306 TTLPWEFGNL 315
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 74 NLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQN 133
+LS+LQ ++S N IF L +Y N N+L E+P E+ NL+ L L L +
Sbjct: 230 DLSNLQIFNISAN---------IFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSH 279
Query: 134 NFLT 137
N LT
Sbjct: 280 NRLT 283
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 37/157 (23%)
Query: 241 NCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKL 300
+ KY +Q +L++ ++ NIS I + LT +YL GN L
Sbjct: 218 DSKYDDQLWHALDLSNLQIFNISANIFK----YDFLTRLYLNGNSLTE------------ 261
Query: 301 QLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLIS 360
+P E L++L LDLS N+L+ S+P G+ L+ N +++
Sbjct: 262 -------------LPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDN-MVT 306
Query: 361 IIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKVLV 397
+P NL ++ +L + N PLE LK+L
Sbjct: 307 TLPWEFGNLCNLQFLGVEGN------PLEKQFLKILT 337
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 81 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 137
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ + V +SDFG+++ +L D +T + +
Sbjct: 138 VNDQGVVKVSDFGLSRYVL--DDEYTSSVGS 166
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ EYM +G L L + Q L + DV A+EYL S +H DL N L
Sbjct: 76 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCL 132
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ + V +SDFG+++ +L D +T + +
Sbjct: 133 VNDQGVVKVSDFGLSRYVL--DDEYTSSVGS 161
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 449 LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 148
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L+ + VA +SDFG+ K + S TQ+T
Sbjct: 149 LVSEDNVAKVSDFGLTK-----EASSTQDTG 174
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V EYMP+G+L L N + L + ++ A+EYL IH DL N
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 161
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N V ++DFG+++L+ T +T T H
Sbjct: 162 LVGENHVVKVADFGLSRLM-------TGDTYTAH 188
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 418 QDGMKVAVKVFDLQYERAFKSFDVAC-DMMKK---LVLEYMPHGSLEKCLYSSNYILDIF 473
+ G K + + Y + C D +K LV+EY+P GSL Y + + +
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLA 117
Query: 474 QRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
Q L + + YLH S IH +L NVLL N+ + + DFG+AK +
Sbjct: 118 QLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 449 LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 83 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 139
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L+ + VA +SDFG+ K + S TQ+T
Sbjct: 140 LVSEDNVAKVSDFGLTK-----EASSTQDTG 165
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 416 RIQDGMKVAVKVFDLQYERAFKSFDVACDMMK----KLVLEYMPHGSLEKCLYSSNYILD 471
+++ G + +++ Y + C+ +LV+EY+P GSL Y + +
Sbjct: 53 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHCVG 110
Query: 472 IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+ Q L + + YLH + IH L NVLL N+ + + DFG+AK +
Sbjct: 111 LAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 449 LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 320
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L+ + VA +SDFG+ K + S TQ+T
Sbjct: 321 LVSEDNVAKVSDFGLTK-----EASSTQDTG 346
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 449 LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V EYM GSL L S +L L +DV A+EYL +H DL NV
Sbjct: 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNV 133
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L+ + VA +SDFG+ K + S TQ+T
Sbjct: 134 LVSEDNVAKVSDFGLTK-----EASSTQDTG 159
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 416 RIQDGMKVAVKVFDLQYERAFKSFDVACDMMK----KLVLEYMPHGSLEKCLYSSNYILD 471
+++ G + +++ Y + C+ +LV+EY+P GSL Y + +
Sbjct: 52 QLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHCVG 109
Query: 472 IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+ Q L + + YLH + IH L NVLL N+ + + DFG+AK +
Sbjct: 110 LAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 49/202 (24%)
Query: 378 SSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYERAFK 437
+ N + +PL++ L + FG ++KA++ + VAVK+F +Q +++++
Sbjct: 16 TENLYFQSMPLQL----------LEVKARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQ 64
Query: 438 -SFDV----------------------ACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQ 474
++V + D+ L+ + GSL L ++ ++ +
Sbjct: 65 NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNE 122
Query: 475 RLNIMIDVALALEYLHF-------GYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527
+I +A L YLH G+ I H D+K NVLL NN+ A ++DFG+A L
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA---L 179
Query: 528 KEDQSFTQNTNTCHHRIYGTRR 549
K + ++ H ++ GTRR
Sbjct: 180 KFEAG--KSAGDTHGQV-GTRR 198
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 409 FGSIYKARIQDGMK----VAVKVFDLQY-ERAFKSF-------------------DVACD 444
FG + + R++ K VA+K Y ER + F V +
Sbjct: 29 FGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTN 88
Query: 445 MMKKLVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
M ++L E+M +G+L+ L ++ + Q + ++ +A + YL +H DL
Sbjct: 89 SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLA 145
Query: 504 LSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRI 544
N+L+ +N+V +SDFG+++ L+E+ S T++ +I
Sbjct: 146 ARNILVNSNLVCKVSDFGLSR-FLEENSSDPTETSSLGGKI 185
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 96/282 (34%), Gaps = 82/282 (29%)
Query: 407 SGFGSIYKARI------QDGMKVAVKVFDLQYERAFKSFDVACDMMKKL----------- 449
FG ++ A QD M VAVK E A + F +++ L
Sbjct: 23 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 82
Query: 450 ---------VLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVALAL 486
V EYM HG L + L S + L + Q L + VA +
Sbjct: 83 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 142
Query: 487 EYL---HFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
YL HF +H DL N L+G +V + DFGM++ + D ++R
Sbjct: 143 VYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD----------YYR 186
Query: 544 IYGT-----RRNPQMNFFSGEMTLKSWV---------------NDLLPISVMEVVDVNLL 583
+ G R P + + T +S V +S E +D
Sbjct: 187 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 246
Query: 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625
E + C V+ + C P+QR + K+ RL
Sbjct: 247 GRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 97/282 (34%), Gaps = 82/282 (29%)
Query: 407 SGFGSIYKARI------QDGMKVAVKVFDLQYERAFKSFDVACDMMKKL----------- 449
FG ++ A QD M VAVK E A + F +++ L
Sbjct: 29 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 88
Query: 450 ---------VLEYMPHGSLEKCLYS--------------SNYILDIFQRLNIMIDVALAL 486
V EYM HG L + L S + L + Q L + VA +
Sbjct: 89 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 148
Query: 487 EYL---HFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
YL HF +H DL N L+G +V + DFGM++ + D ++R
Sbjct: 149 VYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD----------YYR 192
Query: 544 IYGT-----RRNPQMNFFSGEMTLKSWV---------------NDLLPISVMEVVDVNLL 583
+ G R P + + T +S V +S E +D
Sbjct: 193 VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC--- 249
Query: 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625
+ + + C V+ + C P+QR + K+ RL
Sbjct: 250 ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 434 RAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGY 493
R + +F A + ++++Y+ G L L S + + +V LALEYLH
Sbjct: 70 RMWGTFQDAQQIF--MIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH--- 123
Query: 494 STPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
S II+ DLK N+LL N ++DFG AK +
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + + ++ V++ ++YL +H DL NVL
Sbjct: 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVL 142
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
L N A +SDFG++K L +D +T +
Sbjct: 143 LVNRHYAKISDFGLSKALGADDSYYTARS 171
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 56/241 (23%)
Query: 409 FGSIYKARIQDGMKVAVKVFD------------------LQYERAFKSFDVACDMMKKLV 450
FG ++ A KVAVK LQ+++ K V ++
Sbjct: 195 FGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII 254
Query: 451 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALAL-EYLHFGYSTPIIHCDLKLSNVLL 509
E+M GSL L S Q L +ID + + E + F IH DL+ +N+L+
Sbjct: 255 TEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 311
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKS--WVN 567
++V ++DFG+A++ K +T +NF G T+KS W
Sbjct: 312 SASLVCKIADFGLARVGAKFPIKWTAPE--------------AINF--GSFTIKSDVWSF 355
Query: 568 DLLPISVMEVVDVN------------LLSMEDKYFTTKKQ-CLSFVFNLAMECTAESPKQ 614
+L +ME+V + ++E Y + + C ++N+ M C P++
Sbjct: 356 GIL---LMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEE 412
Query: 615 R 615
R
Sbjct: 413 R 413
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 89/263 (33%), Gaps = 58/263 (22%)
Query: 407 SGFGSIYKARI------QDGMKVAVKVFDLQYERAFKSFDVACDMMKKL----------- 449
FG ++ A QD + VAVK + A K F +++ L
Sbjct: 24 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGV 83
Query: 450 ---------VLEYMPHGSLEKCLYSSN------------YILDIFQRLNIMIDVALALEY 488
V EYM HG L K L + L Q L+I +A + Y
Sbjct: 84 CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVY 143
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTR 548
L S +H DL N L+G N++ + DFGM++ D T H + R
Sbjct: 144 L---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR-----DVYSTDYYRVGGHTMLPIR 195
Query: 549 RNPQMNFFSGEMTLKSWVNDL------------LPISVMEVVDVNLLSMEDKYFTTKKQC 596
P + + T +S V L P + +V + + + C
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 255
Query: 597 LSFVFNLAMECTAESPKQRINAK 619
V+ L + C P R N K
Sbjct: 256 PQEVYELMLGCWQREPHMRKNIK 278
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 418 QDGMKVAVKVFDLQYERAFKSFDVAC-DMMKK---LVLEYMPHGSLEKCLYSSNYILDIF 473
+ G K + + Y + C D +K LV+EY+P GSL Y + + +
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLA 117
Query: 474 QRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
Q L + + YLH + IH +L NVLL N+ + + DFG+AK +
Sbjct: 118 QLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 192 LSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQS 251
L IL+L KN + F L +L L L+DN LT+ P +F Y LS + L +
Sbjct: 61 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-VPTQAFEY-LSKLRELWLRNNP 118
Query: 252 LEVFSMFNCNISGGI----LEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVD 307
+E + N + L E+ L ++ G + + +C L+ + L+
Sbjct: 119 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA-- 176
Query: 308 NKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLW 367
L L EL+LSGN+L P F TSLR L L ++ +I +
Sbjct: 177 -------------LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFD 223
Query: 368 NLKDILYLNLSSNFFIS 384
+LK + LNLS N +S
Sbjct: 224 DLKSLEELNLSHNNLMS 240
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 19/173 (10%)
Query: 165 IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDN 224
+P+L L L+ N + SKL L L+ N + F + +L+RL+L +
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 225 YLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT---NLTAIYL 281
E +F L N +YL ++ CN L++I NLT L + L
Sbjct: 142 KRLEYISEAAF-EGLVNLRYL----------NLGMCN-----LKDIPNLTALVRLEELEL 185
Query: 282 AGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKL 334
+GN+L+ P + L L+ L + ++ F L SL EL+LS N L
Sbjct: 186 SGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 409 FGSIYKARIQDGMK----VAVKVFDLQY-ERAFKSF-------------------DVACD 444
FG + + R++ K VA+K Y ER + F V +
Sbjct: 27 FGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTN 86
Query: 445 MMKKLVL-EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
M ++L E+M +G+L+ L ++ + Q + ++ +A + YL +H DL
Sbjct: 87 SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLA 143
Query: 504 LSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRI 544
N+L+ +N+V +SDFG+++ L+E+ S T++ +I
Sbjct: 144 ARNILVNSNLVCKVSDFGLSR-FLEENSSDPTYTSSLGGKI 183
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 192 LSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQS 251
L IL+L KN + F L +L L L+DN LT+ P +F Y LS + L +
Sbjct: 61 LEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTT-VPTQAFEY-LSKLRELWLRNNP 118
Query: 252 LEVFSMFNCNISGGI----LEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVD 307
+E + N + L E+ L ++ G + + +C L+ + L+
Sbjct: 119 IESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA-- 176
Query: 308 NKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLW 367
L L EL+LSGN+L P F TSLR L L ++ +I +
Sbjct: 177 -------------LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFD 223
Query: 368 NLKDILYLNLSSNFFIS 384
+LK + LNLS N +S
Sbjct: 224 DLKSLEELNLSHNNLMS 240
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 19/173 (10%)
Query: 165 IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDN 224
+P+L L L+ N + SKL L L+ N + F + +L+RL+L +
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 225 YLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT---NLTAIYL 281
E +F L N +YL ++ CN L++I NLT L + L
Sbjct: 142 KRLEYISEAAF-EGLVNLRYL----------NLGMCN-----LKDIPNLTALVRLEELEL 185
Query: 282 AGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKL 334
+GN+L+ P + L L+ L + ++ F L SL EL+LS N L
Sbjct: 186 SGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 49/207 (23%)
Query: 192 LSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQS 251
L IL+L +N + F L NL L L+DN LT+ P +F+Y LS K L +
Sbjct: 90 LEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT-IPNGAFVY-LSKLKELWLRNNP 147
Query: 252 LEVFSMFNCN------------------ISGGILEEISNLTNLTAIYLAGNKLNGSIPIT 293
+E + N IS G E +SNL L +
Sbjct: 148 IESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLN--------------LA 193
Query: 294 LCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSL 353
+C L+++ L+ L L ELDLSGN LS P F L+ L +
Sbjct: 194 MCNLREIPNLT---------------PLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238
Query: 354 DSNKLISIIPSTLWNLKDILYLNLSSN 380
+++ I + NL+ ++ +NL+ N
Sbjct: 239 IQSQIQVIERNAFDNLQSLVEINLAHN 265
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKK----------------- 448
FG +YKA+ ++ G A KV + + E + + V +++
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 89
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
+++E+ P G+++ + + L Q I + LE L+F +S IIH DLK
Sbjct: 90 KLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDLKAG 146
Query: 506 NVLLGNNMVAHLSDFGMAKLLLK 528
NVL+ L+DFG++ LK
Sbjct: 147 NVLMTLEGDIRLADFGVSAKNLK 169
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKK----------------- 448
FG +YKA+ ++ G A KV + + E + + V +++
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 81
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
+++E+ P G+++ + + L Q I + LE L+F +S IIH DLK
Sbjct: 82 KLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDLKAG 138
Query: 506 NVLLGNNMVAHLSDFGMAKLLLK 528
NVL+ L+DFG++ LK
Sbjct: 139 NVLMTLEGDIRLADFGVSAKNLK 161
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ GSL + + +D Q + + ALE+LH S +IH D+K N+L
Sbjct: 94 VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
LG + L+DFG + E ++ T
Sbjct: 149 LGMDGSVKLTDFGFCAQITPEQSKRSEMVGT 179
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 20 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L++S ++ + ++I A ++
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L + + DFG+A
Sbjct: 135 YLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 8 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L++S ++ + ++I A ++
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 122
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L + + DFG+A
Sbjct: 123 YLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K +NVL
Sbjct: 82 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
L + L+DFG+A L D +NT
Sbjct: 137 LSEHGEVKLADFGVAGQLT--DTQIKRNT 163
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 20 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L++S ++ + ++I A ++
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L + + DFG+A
Sbjct: 135 YLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K +NVL
Sbjct: 102 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 156
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
L + L+DFG+A L D +NT
Sbjct: 157 LSEHGEVKLADFGVAGQLT--DTQIKRNT 183
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ GSL + + +D Q + + ALE+LH S +IH D+K N+L
Sbjct: 94 VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
LG + L+DFG + E
Sbjct: 149 LGMDGSVKLTDFGFCAQITPE 169
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ GSL + + +D Q + + ALE+LH S +IH D+K N+L
Sbjct: 94 VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 148
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
LG + L+DFG + E
Sbjct: 149 LGMDGSVKLTDFGFCAQITPE 169
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ GSL + + +D Q + + ALE+LH S +IH D+K N+L
Sbjct: 95 VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNIL 149
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
LG + L+DFG + E
Sbjct: 150 LGMDGSVKLTDFGFCAQITPE 170
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV ++M LE + ++ +L M+ LEYLH + I+H DLK +N+L
Sbjct: 89 LVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLL 144
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR----IYGTR 548
L N V L+DFG+AK ++++ T +R ++G R
Sbjct: 145 LDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K +NVL
Sbjct: 82 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 136
Query: 509 LGNNMVAHLSDFGMAKLL 526
L + L+DFG+A L
Sbjct: 137 LSEHGEVKLADFGVAGQL 154
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
++ E+M +GSL+ L ++ + Q + ++ +A ++YL +H L N+L
Sbjct: 85 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRALAARNIL 141
Query: 509 LGNNMVAHLSDFGMAKLL 526
+ +N+V +SDFG+++ L
Sbjct: 142 VNSNLVCKVSDFGLSRFL 159
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 45/199 (22%)
Query: 375 LNLSSNFFISPL--PLEIGNLKV--------LVGIDLSMNNFSGF-GSIYKARIQDGMKV 423
+ + ++ F SP P E+ + K+ + I+L NF +Y+ R + + V
Sbjct: 308 MPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQ-IDV 366
Query: 424 AVKVFDLQYERAFKSFDVACDMMKK-------------------------LVLEYMPHGS 458
A+KV E+A +MM++ LV+E G
Sbjct: 367 AIKVLKQGTEKADTE-----EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP 421
Query: 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLS 518
L K L + + ++ V++ ++YL +H +L NVLL N A +S
Sbjct: 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKIS 478
Query: 519 DFGMAKLLLKEDQSFTQNT 537
DFG++K L +D +T +
Sbjct: 479 DFGLSKALGADDSYYTARS 497
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 34/161 (21%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYE-----RAFKSFDVACDMMKKL-VLEYM------PH 456
FG +Y R +VA+++ D++ + +AFK +A + V+ +M PH
Sbjct: 46 FGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103
Query: 457 GSL------EKCLYS----SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
++ + LYS + +LD+ + I ++ + YLH + I+H DLK N
Sbjct: 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKN 160
Query: 507 VLLGNNMVAHLSDFGMAKLL------LKEDQSFTQNTNTCH 541
V N V ++DFG+ + +ED+ QN CH
Sbjct: 161 VFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCH 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIM---IDVALALEYLHFGYSTPIIHCDLKLS 505
+V++Y G L K + + +L FQ I+ + + LAL+++H I+H D+K
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLALKHVH---DRKILHRDIKSQ 154
Query: 506 NVLLGNNMVAHLSDFGMAKLL 526
N+ L + L DFG+A++L
Sbjct: 155 NIFLTKDGTVQLGDFGIARVL 175
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++EY+ GS L LD Q I+ ++ L+YLH S IH D+K +NVL
Sbjct: 97 IIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVL 151
Query: 509 LGNNMVAHLSDFGMAKLL 526
L + L+DFG+A L
Sbjct: 152 LSEHGEVKLADFGVAGQL 169
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 31/143 (21%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFD---------------VACDMMKK---- 448
+G +++ Q G VAVK+F + E++ F+ + +A DM +
Sbjct: 50 YGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 108
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLH---FGYS--TPIIHC 500
L+ Y GSL L + LD L I++ +A L +LH FG I H
Sbjct: 109 QLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR 166
Query: 501 DLKLSNVLLGNNMVAHLSDFGMA 523
DLK N+L+ N ++D G+A
Sbjct: 167 DLKSKNILVKKNGQCCIADLGLA 189
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 213 LINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISN 272
L N++ L L N L ++S L L+N YL + L+ ++ G+ ++
Sbjct: 62 LPNVRYLALGGNKLH----DISALKELTNLTYLILTGNQLQ-------SLPNGVFDK--- 107
Query: 273 LTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGN 332
LTNL + L N+L KL L L+ N+L+ F +L +L ELDLS N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYN 167
Query: 333 KLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
+L F T L+ L L N+L S+ L + Y+ L N
Sbjct: 168 QLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 165 IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDN 224
+PN+ L L GN + + L+ L L N L F L NLK L L +N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 225 YLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGN 284
L S P+ F L+N YL + L+ ++ G+ ++ LTNLT + L+ N
Sbjct: 120 QL-QSLPDGVF-DKLTNLTYLNLAHNQLQ-------SLPKGVFDK---LTNLTELDLSYN 167
Query: 285 KLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIP 339
+L KL +L+ L N+L+ F RL SL + L N + P
Sbjct: 168 QLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 31/143 (21%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFD---------------VACDMMKK---- 448
+G +++ Q G VAVK+F + E++ F+ + +A DM +
Sbjct: 21 YGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLH---FGYS--TPIIHC 500
L+ Y GSL L + LD L I++ +A L +LH FG I H
Sbjct: 80 QLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 501 DLKLSNVLLGNNMVAHLSDFGMA 523
DLK N+L+ N ++D G+A
Sbjct: 138 DLKSKNILVKKNGQCCIADLGLA 160
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 31/143 (21%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFD---------------VACDMMKK---- 448
+G +++ Q G VAVK+F + E++ F+ + +A DM +
Sbjct: 21 YGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLH---FGYS--TPIIHC 500
L+ Y GSL L + LD L I++ +A L +LH FG I H
Sbjct: 80 QLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 501 DLKLSNVLLGNNMVAHLSDFGMA 523
DLK N+L+ N ++D G+A
Sbjct: 138 DLKSKNILVKKNGQCCIADLGLA 160
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 159/376 (42%), Gaps = 80/376 (21%)
Query: 58 NISGLSL-----TSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTL 112
N++GL+L T P L NL++L L+LS N S S++ ++SL + F++N +
Sbjct: 108 NLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQV 163
Query: 113 FGEIPEELGNLAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLL 172
P L NL LE L + +N ++ ++ NLE+L+
Sbjct: 164 TDLKP--LANLTTLERLDISSNKVSDISVL--------------------AKLTNLESLI 201
Query: 173 LWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPE 232
N S P I + L L L N D+ T +L NL L+L +N +++ P
Sbjct: 202 ATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP- 256
Query: 233 LSFLYSLSNCK----YLEQSSQSLEVFSMFNCNISGGILEEIS---NLTNLTAIYLAGNK 285
LS L L+ K + S + ++ N ++ LE+IS NL NLT + L N
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN 316
Query: 286 LNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQ 345
++ P+ L KLQ L F +NK+ D+S N
Sbjct: 317 ISDISPV--SSLTKLQRLFFYNNKVS----------------DVS----------SLANL 348
Query: 346 TSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI-SPLPLEIGNLKVLVGIDLSMN 404
T++ LS N++ + P L NL I L L+ + +P+ N K V I ++
Sbjct: 349 TNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV-----NYKANVSIPNTVK 401
Query: 405 NFSGFGSIYKARIQDG 420
N +G I A I DG
Sbjct: 402 NVTG-ALIAPATISDG 416
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 25/164 (15%)
Query: 215 NLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT 274
NL ++N +N LT TP L N L V + N N I ++NLT
Sbjct: 64 NLTQINFSNNQLTDITP-------LKNLTKL--------VDILMNNNQIADI-TPLANLT 107
Query: 275 NLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNK 333
NLT + L N++ P+ L L +L+L S + + L SL +L S N+
Sbjct: 108 NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLSFSSNQ 162
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISI-IPSTLWNLKDILYLN 376
++ P N T+L L + SNK+ I + + L NL+ ++ N
Sbjct: 163 VTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 204
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 167 NLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNL-YDNY 225
+LE L L N + + + L +L L+ + + +F L LK L + + Y
Sbjct: 153 SLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212
Query: 226 LTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNK 285
L + TP NC Y +L S+ +CN++ + +L L + L+ N
Sbjct: 213 LDTMTP---------NCLY----GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNP 259
Query: 286 LN---GSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCF 342
++ GS+ L +LQ++QL V +L PY F L L L++SGN+L+ + F
Sbjct: 260 ISTIEGSMLHELLRLQEIQL---VGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF 316
Query: 343 GNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLS 402
+ +L L LDSN L LW + LN + P + + D+
Sbjct: 317 HSVGNLETLILDSNPLACDC-RLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVL 375
Query: 403 MNNFSGFGSIYKARIQDGMKVAVKVF 428
+ N+ + +ARI+D + A +VF
Sbjct: 376 LPNYF---TCRRARIRD--RKAQQVF 396
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 301 QLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLIS 360
+LL N+++ EF L EL+L+ N +S P F N +LR L L SN+L
Sbjct: 35 RLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL 94
Query: 361 IIPSTLWNLKDILYLNLSSNFFISPLPL---EIGNLKVL-VG----IDLSMNNFSGFGSI 412
I L ++ L++S N + L ++ NLK L VG + +S FSG S+
Sbjct: 95 IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSL 154
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 102/270 (37%), Gaps = 76/270 (28%)
Query: 167 NLENLLLWGNNFSGAIPHFIFNA-SKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNY 225
NL L L N IP +F S L+ L++ +N L+ F +L NLK L + DN
Sbjct: 81 NLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND 139
Query: 226 LTSSTPELSFLYSLSNCKYLEQSS----QSLEVFSMFNCNISGGILEEISNLTNLTAIYL 281
L Y+ + SLE ++ CN++ E +S+L L + L
Sbjct: 140 LV----------------YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183
Query: 282 AGNKLNG-------------------------------------SIPITLCKL------- 297
+N S+ IT C L
Sbjct: 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLA 243
Query: 298 -QKLQLLSFVD------NKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRI 350
+ L L F++ + +EG + +E RL E+ L G +L+ P F LR+
Sbjct: 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ---EIQLVGGQLAVVEPYAFRGLNYLRV 300
Query: 351 LSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
L++ N+L ++ S ++ ++ L L SN
Sbjct: 301 LNVSGNQLTTLEESVFHSVGNLETLILDSN 330
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 89 LILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 144
Query: 509 LGNNMVAHLSDFGMA 523
LG+N ++DFG +
Sbjct: 145 LGSNGELKIADFGWS 159
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 143
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 144 LVTQHYAKISDFGLSKALRADENXYKAQTH 173
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 89 LILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 144
Query: 509 LGNNMVAHLSDFGMA 523
LG+N ++DFG +
Sbjct: 145 LGSNGELKIADFGWS 159
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 159/376 (42%), Gaps = 80/376 (21%)
Query: 58 NISGLSL-----TSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTL 112
N++GL+L T P L NL++L L+LS N S S++ ++SL + F++N +
Sbjct: 108 NLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSNQV 163
Query: 113 FGEIPEELGNLAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLL 172
P L NL LE L + +N ++ ++ NLE+L+
Sbjct: 164 TDLKP--LANLTTLERLDISSNKVSDISVL--------------------AKLTNLESLI 201
Query: 173 LWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPE 232
N S P I + L L L N D+ T +L NL L+L +N +++ P
Sbjct: 202 ATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP- 256
Query: 233 LSFLYSLSNCK----YLEQSSQSLEVFSMFNCNISGGILEEIS---NLTNLTAIYLAGNK 285
LS L L+ K + S + ++ N ++ LE+IS NL NLT + L N
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN 316
Query: 286 LNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQ 345
++ P+ L KLQ L F +NK+ D+S N
Sbjct: 317 ISDISPV--SSLTKLQRLFFSNNKVS----------------DVS----------SLANL 348
Query: 346 TSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI-SPLPLEIGNLKVLVGIDLSMN 404
T++ LS N++ + P L NL I L L+ + +P+ N K V I ++
Sbjct: 349 TNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV-----NYKANVSIPNTVK 401
Query: 405 NFSGFGSIYKARIQDG 420
N +G I A I DG
Sbjct: 402 NVTG-ALIAPATISDG 416
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 215 NLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT 274
NL ++N +N LT TP L N L +++ M N I+ + ++NLT
Sbjct: 64 NLTQINFSNNQLTDITP-------LKNLTKL------VDIL-MNNNQIAD--ITPLANLT 107
Query: 275 NLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNK 333
NLT + L N++ P+ L L +L+L S + + L SL +L S N+
Sbjct: 108 NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLSFSSNQ 162
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISI-IPSTLWNLKDILYLN 376
++ P N T+L L + SNK+ I + + L NL+ ++ N
Sbjct: 163 VTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 204
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 159/376 (42%), Gaps = 80/376 (21%)
Query: 58 NISGLSL-----TSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTL 112
N++GL+L T P L NL++L L+LS N S S++ ++SL + F++N +
Sbjct: 108 NLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQV 163
Query: 113 FGEIPEELGNLAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLL 172
P L NL LE L + +N ++ ++ NLE+L+
Sbjct: 164 TDLKP--LANLTTLERLDISSNKVSDISVL--------------------AKLTNLESLI 201
Query: 173 LWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPE 232
N S P I + L L L N D+ T +L NL L+L +N +++ P
Sbjct: 202 ATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP- 256
Query: 233 LSFLYSLSNCK----YLEQSSQSLEVFSMFNCNISGGILEEIS---NLTNLTAIYLAGNK 285
LS L L+ K + S + ++ N ++ LE+IS NL NLT + L N
Sbjct: 257 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN 316
Query: 286 LNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQ 345
++ P+ L KLQ L F +NK+ D+S N
Sbjct: 317 ISDISPV--SSLTKLQRLFFYNNKVS----------------DVS----------SLANL 348
Query: 346 TSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI-SPLPLEIGNLKVLVGIDLSMN 404
T++ LS N++ + P L NL I L L+ + +P+ N K V I ++
Sbjct: 349 TNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV-----NYKANVSIPNTVK 401
Query: 405 NFSGFGSIYKARIQDG 420
N +G I A I DG
Sbjct: 402 NVTG-ALIAPATISDG 416
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 215 NLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT 274
NL ++N +N LT TP L+ ++ +++ M N I+ + ++NLT
Sbjct: 64 NLTQINFSNNQLTDITP-------------LKNLTKLVDIL-MNNNQIAD--ITPLANLT 107
Query: 275 NLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNK 333
NLT + L N++ P+ L L +L+L S + + L SL +L+ S N+
Sbjct: 108 NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLNFSSNQ 162
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISI-IPSTLWNLKDILYLN 376
++ P N T+L L + SNK+ I + + L NL+ ++ N
Sbjct: 163 VTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G + K L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 90 LILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 146 LGSAGELKIADFG 158
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 31/143 (21%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFDV---------------ACDMMKK---- 448
+G +++ + G VAVK+F + E++ F+ ++ A DM +
Sbjct: 21 YGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSST 79
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLH---FGYS--TPIIHC 500
L+ Y HGSL L L+ L + + A L +LH FG I H
Sbjct: 80 QLWLITHYHEHGSLYDFL--QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHR 137
Query: 501 DLKLSNVLLGNNMVAHLSDFGMA 523
D K NVL+ +N+ ++D G+A
Sbjct: 138 DFKSRNVLVKSNLQCCIADLGLA 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G + K L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 90 LILEYAPRGEVYKELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 146 LGSAGELKIADFG 158
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 501
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 502 LVTQHYAKISDFGLSKALRADENYYKAQTH 531
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 161 TDVQIPNLENLLLWGN--NFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKR 218
++V +P+LE L L N +F G F + L L+L N + N G L L+
Sbjct: 342 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEH 400
Query: 219 LNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTA 278
L+ + L + E S SL N YL+ S V FN +G L++L
Sbjct: 401 LDFQHSNLKQMS-EFSVFLSLRNLIYLDISHTHTRV--AFNGIFNG--------LSSLEV 449
Query: 279 IYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSI 338
+ +AGN SF +N L P F L +L LDLS +L
Sbjct: 450 LKMAGN-------------------SFQENFL----PDIFTELRNLTFLDLSQCQLEQLS 486
Query: 339 PTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNL-KVLV 397
PT F + +SL++L++ N S+ L + L+ S N ++ E+ + L
Sbjct: 487 PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 546
Query: 398 GIDLSMNNFS 407
++L+ N+F+
Sbjct: 547 FLNLTQNDFA 556
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 16/240 (6%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L V+ L
Sbjct: 54 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 113
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLK 370
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI + L L
Sbjct: 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173
Query: 371 DILYLNLSSNFFISPLP-LEIGNLKVLVGIDLSM-NNFSGFGSIYKARIQD--GMKVAVK 426
+ LNLS + ++P+ ++ G K + L++ NNF ++ K IQ G++V
Sbjct: 174 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSL-NVMKTCIQGLAGLEVHRL 232
Query: 427 VF-DLQYERAFKSFDVACDMMKKLVLEYMPHGSLE--KCLYSSNYILDIFQRLNIMIDVA 483
V + + E + FD K LE + + ++E + Y Y+ DI N + +V+
Sbjct: 233 VLGEFRNEGNLEKFD-------KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVS 285
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 9 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 123
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 124 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EYMP G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIKVADFGFAK 189
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 449 LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V+EYMP G L + SNY + + + R +V LAL+ +H S IH D+K N+
Sbjct: 146 MVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGFIHRDVKPDNM 199
Query: 508 LLGNNMVAHLSDFGMAKLLLKE 529
LL + L+DFG + KE
Sbjct: 200 LLDKSGHLKLADFGTCMKMNKE 221
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 4 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 59 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 119 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 502
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 503 LVTQHYAKISDFGLSKALRADENYYKAQTH 532
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 24 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 79 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 138
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 139 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EYMP G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIKVADFGFAK 189
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 6 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 120
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 121 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 31 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 86 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 145
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 146 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 4 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 59 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 119 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 32 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 146
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 147 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 449 LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V+EYMP G L + SNY + + + R +V LAL+ +H S IH D+K N+
Sbjct: 151 MVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGFIHRDVKPDNM 204
Query: 508 LLGNNMVAHLSDFGMAKLLLKE 529
LL + L+DFG + KE
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKE 226
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 4 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 59 RKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 119 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 32 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 146
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 147 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 24/202 (11%)
Query: 335 SGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLK 394
SG+ P NQ LRIL K + ++ S + + ++ E +K
Sbjct: 23 SGTAP----NQAQLRILKETELKRVKVLGSGAFG-------TVYKGIWVP----EGETVK 67
Query: 395 VLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYM 454
+ V I + +N +G KA ++ M A+ + + + + V +LV + M
Sbjct: 68 IPVAIKI-LNETTG----PKANVE-FMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLM 121
Query: 455 PHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMV 514
PHG L + ++ + LN + +A + YL ++H DL NVL+ +
Sbjct: 122 PHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNH 178
Query: 515 AHLSDFGMAKLLLKEDQSFTQN 536
++DFG+A+LL +++ + +
Sbjct: 179 VKITDFGLARLLEGDEKEYNAD 200
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 449 LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+V+EYMP G L + SNY + + + R +V LAL+ +H S IH D+K N+
Sbjct: 151 MVMEYMPGGDLVNLM--SNYDVPEKWARF-YTAEVVLALDAIH---SMGFIHRDVKPDNM 204
Query: 508 LLGNNMVAHLSDFGMAKLLLKE 529
LL + L+DFG + KE
Sbjct: 205 LLDKSGHLKLADFGTCMKMNKE 226
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 29/156 (18%)
Query: 389 EIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMM 446
EI + ++ VG + +F G++YK + VAVK+ ++ + ++F ++
Sbjct: 9 EIPDGQITVGQRIGSGSF---GTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 447 KK-------------------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALE 487
+K +V ++ SL L+ ++ + ++I A ++
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 123
Query: 488 YLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
YLH + IIH DLK +N+ L ++ + DFG+A
Sbjct: 124 YLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 137
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 138 LVTQHYAKISDFGLSKALRADENYYKAQTH 167
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 157
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 158 LVTQHYAKISDFGLSKALRADENYYKAQTH 187
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 143
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 144 LVTQHYAKISDFGLSKALRADENYYKAQTH 173
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 149
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 150 LVTQHYAKISDFGLSKALRADENYYKAQTH 179
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V EY+ +G L L S L+ Q L + DV + +L S IH DL N L
Sbjct: 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCL 136
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
+ ++ +SDFGM + +L D + + T
Sbjct: 137 VDRDLCVKVSDFGMTRYVL--DDQYVSSVGT 165
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 159
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 160 LVTQHYAKISDFGLSKALRADENYYKAQTH 189
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 159
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 160 LVTQHYAKISDFGLSKALRADENYYKAQTH 189
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+E G L K L + ++ D + ++ V++ ++YL + +H DL NVL
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHRDLAARNVL 139
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
L A +SDFG++K L ++ + T+
Sbjct: 140 LVTQHYAKISDFGLSKALRADENYYKAQTH 169
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 423 VAVKVFDLQYERAFKSFDVACDMMKK----LVLEYMPHGSLEKCLYSSNYILDIFQRLNI 478
V +V L +E F + + C K V+EY+ G L + S + D+ +
Sbjct: 66 VEKRVLSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFY 123
Query: 479 MIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
++ L L++LH S I++ DLKL N+LL + ++DFGM K
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 54 VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLF 113
+T L++ G +T + L L++L L LSFN S S+ N L ++ NNN L
Sbjct: 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253
Query: 114 GEIPEELGNLAELETLWLQNNFLTG 138
++P L + ++ ++L NN ++
Sbjct: 254 -KVPGGLADHKYIQVVYLHNNNISA 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 423 VAVKVFDLQYERAFKSFDVACDMMKK----LVLEYMPHGSLEKCLYSSNYILDIFQRLNI 478
V +V L +E F + + C K V+EY+ G L + S + D+ +
Sbjct: 67 VEKRVLSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFY 124
Query: 479 MIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
++ L L++LH S I++ DLKL N+LL + ++DFGM K
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 54 VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLF 113
+T L++ G +T + L L++L L LSFN S S+ N L ++ NNN L
Sbjct: 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253
Query: 114 GEIPEELGNLAELETLWLQNNFLTG 138
++P L + ++ ++L NN ++
Sbjct: 254 -KVPGGLADHKYIQVVYLHNNNISA 277
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV + MPHG L + ++ + LN + +A + YL ++H DL NV
Sbjct: 92 QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNV 148
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
L+ + ++DFG+A+LL +++ + +
Sbjct: 149 LVKSPNHVKITDFGLARLLEGDEKEYNAD 177
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
+++E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 87 IIIEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 138
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLM-------TGDTXTAH 170
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ GSL + + +D Q + + ALE+LH S +IH ++K N+L
Sbjct: 95 VVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNIKSDNIL 149
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
LG + L+DFG + E
Sbjct: 150 LGMDGSVKLTDFGFCAQITPE 170
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 265 GILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASL 324
G+ +E LT+LT +YL GNKL KL L L+ N+L+ F +L L
Sbjct: 46 GVFDE---LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQL 102
Query: 325 YELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFIS 384
EL L+ N+L F T L+ L L N+L S+ L + Y+ L N +
Sbjct: 103 KELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162
Query: 385 PLP 387
P
Sbjct: 163 TCP 165
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 164
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 165 LDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 225 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 284
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 285 ELVSRISAI 293
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIQVTDFGFAK 190
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 166
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 167 IDQQGYIQVTDFGFAK 182
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 262 ISGGILEEIS---NLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEF 318
+ G L +IS LTNLT + L GN+L KL L+ L V+N+L+ F
Sbjct: 70 LGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVF 129
Query: 319 CRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLS 378
+L +L L L N+L F T+L L LD+N+L S+ L + L+L+
Sbjct: 130 DKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLN 189
Query: 379 SN 380
N
Sbjct: 190 DN 191
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 213 LINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISN 272
L N++ L L N L ++S L L+N YL + L+ ++ G+ ++
Sbjct: 62 LPNVRYLALGGNKLH----DISALKELTNLTYLILTGNQLQ-------SLPNGVFDK--- 107
Query: 273 LTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGN 332
LTNL + L N+L KL L L N+L+ F +L +L LDL N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNN 167
Query: 333 KLSGSIPTCFGNQTSLRILSLDSNKLISI 361
+L F T L+ LSL+ N+L S+
Sbjct: 168 QLQSLPEGVFDKLTQLKQLSLNDNQLKSV 196
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
Query: 401 LSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYERAFKS-----------------FDVAC 443
L + FG ++KA++ + VAVK+F LQ +++++S F A
Sbjct: 20 LEIKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAE 78
Query: 444 DMMKKLVLE------YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHF------ 491
L +E + GSL Y I+ + ++ ++ L YLH
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 492 --GYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
G+ I H D K NVLL +++ A L+DFG+A
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA +++L S +H DL N +
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 166
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND 568
L ++DFG+A+ +L D+ F ++ H++ G +
Sbjct: 167 LDEKFTVKVADFGLARDML--DKEF----DSVHNKT-GAK-------------------- 199
Query: 569 LLPISVMEVVDVNLLSMEDKYFTTKKQCLSF-VFNLAMECTAESPKQRINAKESVTRLLK 627
LP+ M L S++ + FTTK SF V + P +N + LL+
Sbjct: 200 -LPVKWMA-----LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 253
Query: 628 IRDLL 632
R LL
Sbjct: 254 GRRLL 258
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 24/157 (15%)
Query: 405 NFSGFGSIYKAR-IQDGMKVAVKVF--DLQYERAF-----KSFDVACDMMKKLVLEYMPH 456
F G ++ AR ++D VAVKV DL + +F + A + ++
Sbjct: 21 GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 80
Query: 457 GSLEKCLYSSNYIL----------DIFQRLNIMID------VALALEYLHFGYSTPIIHC 500
G E YI+ DI M +A A + L+F + IIH
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR 140
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
D+K +N+++ + DFG+A+ + S TQ
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
V+EY+ G L + + + R +++LAL YLH II+ DLKL NVL
Sbjct: 130 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 185
Query: 509 LGNNMVAHLSDFGMAKLLLK 528
L + L+D+GM K L+
Sbjct: 186 LDSEGHIKLTDYGMCKEGLR 205
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 400 DLSMNNFSGFGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMKKL-VLEYMPHG 457
DL FG++Y AR +++ VA+K +++ + + D++K++ L+ + H
Sbjct: 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ---DIIKEVRFLQKLRHP 114
Query: 458 S-----------------LEKCLYSSNYILDIFQRLNIMIDVAL----ALEYLHFGYSTP 496
+ +E CL S++ +L++ ++ +++A AL+ L + +S
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+IH D+K N+LL + L DFG A ++
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 24/157 (15%)
Query: 405 NFSGFGSIYKAR-IQDGMKVAVKVF--DLQYERAF-----KSFDVACDMMKKLVLEYMPH 456
F G ++ AR ++D VAVKV DL + +F + A + ++
Sbjct: 21 GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 80
Query: 457 GSLEKCLYSSNYIL----------DIFQRLNIMID------VALALEYLHFGYSTPIIHC 500
G E YI+ DI M +A A + L+F + IIH
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR 140
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
D+K +N+++ + DFG+A+ + S TQ
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 39/160 (24%)
Query: 408 GFGSIYKARIQD----GMKVAVKVFDLQYERAFKSFDVACDMMKK--------------- 448
G G+ K +I + G KVAVK+ + Q +S DV + ++
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 449 -----------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPI 497
+V+EY+ G L + + ++ R + + A++Y H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
+H DLK NVLL +M A ++DFG++ ++ D F +++
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRDS 170
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRL-NIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ EYM GSL L S + +L + +A + Y+ IH DL+ +NV
Sbjct: 85 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANV 141
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFT 534
L+ +++ ++DFG+A+++ ED +T
Sbjct: 142 LVSESLMCKIADFGLARVI--EDNEYT 166
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
V+EY+ G L + + + R +++LAL YLH II+ DLKL NVL
Sbjct: 98 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 153
Query: 509 LGNNMVAHLSDFGMAKLLLK 528
L + L+D+GM K L+
Sbjct: 154 LDSEGHIKLTDYGMCKEGLR 173
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 87 CLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 35/153 (22%)
Query: 398 GIDLSMNNF------SGFGSIYKARIQDGMKVAVKVFDLQ--YERAFKSFDVACDMMK-- 447
GID NF + G ++K R Q G + VKV ++ R + F+ C ++
Sbjct: 6 GIDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 448 --------------------KLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALAL 486
L+ +MP+GSL L+ +N+++D Q + +D+A +
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 487 EYLHFGYSTPII-HCDLKLSNVLLGNNMVAHLS 518
+LH P+I L +V++ +M A +S
Sbjct: 125 AFLH--TLEPLIPRHALNSRSVMIDEDMTARIS 155
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%)
Query: 318 FCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNL 377
F RL L +L+L N+L+G P F + ++ L L NK+ I L + LNL
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 378 SSNFFISPLPLEIGNLKVLVGIDLSMNNF 406
N +P +L L ++L+ N F
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPF 138
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 164 QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYD 223
++P+L L L N +G P+ AS + L+L +N ++ F L LK LNLYD
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 224 NYLTSSTP 231
N ++ P
Sbjct: 112 NQISCVMP 119
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 296 KLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDS 355
+L L L N+L G P F + + EL L NK+ F L+ L+L
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 356 NKLISIIPSTLWNLKDILYLNLSSNFF 382
N++ ++P + +L + LNL+SN F
Sbjct: 112 NQISCVMPGSFEHLNSLTSLNLASNPF 138
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
+++E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 91 IIIEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 142
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 174
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
L+I I +A A+E+LH S ++H DLK SN+ + V + DFG+ + ++++ T
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 89
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 90 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 147 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 400 DLSMNNFSGFGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMKKL-VLEYMPHG 457
DL FG++Y AR +++ VA+K +++ + + D++K++ L+ + H
Sbjct: 19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ---DIIKEVRFLQKLRHP 75
Query: 458 S-----------------LEKCLYSSNYILDIFQRLNIMIDVAL----ALEYLHFGYSTP 496
+ +E CL S++ +L++ ++ +++A AL+ L + +S
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+IH D+K N+LL + L DFG A ++
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531
++ +AL+YL + IIH D+K N+LL + H++DF +A +L +E Q
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 449 LVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVALALEYLHF----GYSTPIIHC 500
+V+EY G L K Y+ + F L +M + LAL+ H G++ ++H
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSDGGHT--VLHR 140
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ 535
DLK +NV L L DFG+A+ +L D SF +
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAK 174
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 37/149 (24%)
Query: 408 GFGSIYKARIQD----GMKVAVKVFDLQYERAFKSFDVACDMMKK--------------- 448
G G+ K +I + G KVAVK+ + Q +S DV + ++
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 449 -----------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPI 497
+V+EY+ G L + + ++ R + + A++Y H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+H DLK NVLL +M A ++DFG++ ++
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
V+EY+ G L + + + R +++LAL YLH II+ DLKL NVL
Sbjct: 83 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 138
Query: 509 LGNNMVAHLSDFGMAKLLLK 528
L + L+D+GM K L+
Sbjct: 139 LDSEGHIKLTDYGMCKEGLR 158
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIQVTDFGFAK 190
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 88 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 38/250 (15%)
Query: 161 TDVQIPNLENLLLWGN--NFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKR 218
++V +P+LE L L N +F G F L L+L N + N G L L+
Sbjct: 366 SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLG-LEQLEH 424
Query: 219 LNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTA 278
L+ + L + E S SL N YL+ S V FN +G L++L
Sbjct: 425 LDFQHSNLKQMS-EFSVFLSLRNLIYLDISHTHTRV--AFNGIFNG--------LSSLEV 473
Query: 279 IYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSI 338
+ +AGN SF +N L P F L +L LDLS +L
Sbjct: 474 LKMAGN-------------------SFQENFL----PDIFTELRNLTFLDLSQCQLEQLS 510
Query: 339 PTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNL-KVLV 397
PT F + +SL++L++ N S+ L + L+ S N ++ E+ + L
Sbjct: 511 PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLA 570
Query: 398 GIDLSMNNFS 407
++L+ N+F+
Sbjct: 571 FLNLTQNDFA 580
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L V+ L
Sbjct: 78 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 137
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISI 361
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI
Sbjct: 138 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 86 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIQVTDFGFAK 190
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIQVTDFGFAK 190
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
V+EY+ G L + + + R +++LAL YLH II+ DLKL NVL
Sbjct: 87 FVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGIIYRDLKLDNVL 142
Query: 509 LGNNMVAHLSDFGMAKLLLK 528
L + L+D+GM K L+
Sbjct: 143 LDSEGHIKLTDYGMCKEGLR 162
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+++E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 84 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 141 LVGENHLVKVADFGLSRLM-------TGDTXTAH 167
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 449 LVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVALALEYLHF----GYSTPIIHC 500
+V+EY G L K Y+ + F L +M + LAL+ H G++ ++H
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSDGGHT--VLHR 140
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ 535
DLK +NV L L DFG+A+ +L D SF +
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAK 174
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIQVTDFGFAK 190
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIQVTDFGFAK 190
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 89 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 87 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 144 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 93 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EYMP G L + SNY + +V LAL+ +H S +IH D+K N+L
Sbjct: 152 MVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNML 206
Query: 509 LGNNMVAHLSDFG 521
L + L+DFG
Sbjct: 207 LDKHGHLKLADFG 219
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 101 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 157
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 158 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 217
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 218 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 277
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 278 ELVSRISAI 286
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 30/187 (16%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 84 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 139
Query: 508 LLGNNMVAHLSDFGMAKLLLKE--DQSFTQNTNTCHHRIYGTRRNPQMNFFSG-----EM 560
L+ + L DFG++ L+ E ++ + R+ GT + Q + +S EM
Sbjct: 140 LVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
Query: 561 TLKSWVNDLLPISVMEVVD--VNLLSMEDKYFTTKKQCLSFVFNLAME-----CTAESPK 613
+ + P+++ E++D VN + S VF+L + C ++P
Sbjct: 200 AVGRYPRP--PMAIFELLDYIVN---------EPPPKLPSAVFSLEFQDFVNKCLIKNPA 248
Query: 614 QRINAKE 620
+R + K+
Sbjct: 249 ERADLKQ 255
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 195 IDQQGYIQVTDFGFAK 210
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LE+ P G L K L D + M ++A AL Y H +IH D+K N+L
Sbjct: 92 LMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLL 147
Query: 509 LGNNMVAHLSDFG 521
+G ++DFG
Sbjct: 148 MGYKGELKIADFG 160
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 104 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 159
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 160 IDQQGYIQVTDFGFAK 175
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LE+ P G L K L D + M ++A AL Y H +IH D+K N+L
Sbjct: 91 LMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLL 146
Query: 509 LGNNMVAHLSDFG 521
+G ++DFG
Sbjct: 147 MGYKGELKIADFG 159
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 127 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 183
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 184 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 243
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 244 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 303
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 304 ELVSRISAI 312
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 166
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 167 IDQQGYIQVTDFGFAK 182
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+++E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 LVGENHLVKVADFGLSRLM-------TGDTYTAH 169
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 128 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 184
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 185 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 244
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 245 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 304
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 305 ELVSRISAI 313
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VLEY P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIKVADFGFAK 190
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 449 LVLEYMPHGSLE----KCLYSSNYILDIFQRLNIMIDVALALEYLHF----GYSTPIIHC 500
+V+EY G L K Y+ + F L +M + LAL+ H G++ ++H
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFV-LRVMTQLTLALKECHRRSDGGHT--VLHR 140
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
DLK +NV L L DFG+A+ +L D+ F +
Sbjct: 141 DLKPANVFLDGKQNVKLGDFGLAR-ILNHDEDFAKE 175
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LE+ P G L K L D + M ++A AL Y H +IH D+K N+L
Sbjct: 91 LMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLL 146
Query: 509 LGNNMVAHLSDFG 521
+G ++DFG
Sbjct: 147 MGYKGELKIADFG 159
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
L I A++++H PIIH DLK+ N+LL N L DFG A
Sbjct: 139 LKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 436 FKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYST 495
FKS V D+M+ + + + H S L Y L +Q L L+Y+H S
Sbjct: 132 FKSVYVVLDLMESDLHQII-HSSQPLTLEHVRYFL--YQLLR-------GLKYMH---SA 178
Query: 496 PIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+IH DLK SN+L+ N + DFGMA+ L
Sbjct: 179 QVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+++E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 LVGENHLVKVADFGLSRLM-------TGDTYTAH 169
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 165
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 226 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 286 ELVSRISAI 294
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 102 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 157
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 158 LGSAGELKIADFG 170
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 111 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 166
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 167 LGSAGELKIADFG 179
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 436 FKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYST 495
FKS V D+M+ + + + H S L Y L +Q L L+Y+H S
Sbjct: 131 FKSVYVVLDLMESDLHQII-HSSQPLTLEHVRYFL--YQLLR-------GLKYMH---SA 177
Query: 496 PIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+IH DLK SN+L+ N + DFGMA+ L
Sbjct: 178 QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 163
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 164 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 223
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 224 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 283
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 284 ELVSRISAI 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 160
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 161 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 220
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 221 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 280
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 281 ELVSRISAI 289
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 86 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 141
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 142 LGSAGELKIADFG 154
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+P G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIKVADFGFAK 189
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 90 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 509 LGNNMVAHLSDFGMA 523
LG+ ++DFG +
Sbjct: 146 LGSAGELKIADFGWS 160
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 164
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 165 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 224
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 225 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 284
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 285 ELVSRISAI 293
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 111 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 166
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 167 LGSAGELKIADFG 179
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 91 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 142
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLM-------TGDTXTAH 174
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 162
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 163 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 222
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 223 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 282
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 283 ELVSRISAI 291
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG+AK
Sbjct: 174 IDQQGYIQVTDFGLAK 189
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 75/189 (39%), Gaps = 12/189 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA ++YL S +H DL N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCM 165
Query: 509 LGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSW-- 565
L ++DFG+A+ + KE S T + + Q F+ + + S+
Sbjct: 166 LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 225
Query: 566 ------VNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619
P + D+ + ++ + + C ++ + ++C + R +
Sbjct: 226 LLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
Query: 620 ESVTRLLKI 628
E V+R+ I
Sbjct: 286 ELVSRISAI 294
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 99 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 150
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 151 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 182
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 90 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 146 LGSAGELKIADFG 158
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI-DVALALEYLHFGYSTPIIHCDLKLSNV 507
L+L+Y+ G L L + + I + ++ LALE+LH II+ D+KL N+
Sbjct: 136 LILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALEHLH---KLGIIYRDIKLENI 190
Query: 508 LLGNNMVAHLSDFGMAKLLLKED 530
LL +N L+DFG++K + ++
Sbjct: 191 LLDSNGHVVLTDFGLSKEFVADE 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 144 LGSAGELKIADFG 156
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 91 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 142
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 174
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 34/158 (21%)
Query: 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKK----------------- 448
FG +YKA+ ++ + A KV D + E + + V D++
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
+++E+ G+++ + L Q + AL YLH IIH DLK
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 164
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
N+L + L+DFG++ +NT T R
Sbjct: 165 NILFTLDGDIKLADFGVS----------AKNTRTIQRR 192
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 88 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 139
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 171
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 87 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 142
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 143 LGSAGELKIADFG 155
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 275 NLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKL 334
++T +YL GN+ +P L + L L+ +N++ F + L L LS N+L
Sbjct: 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 335 SGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWN-LKDILYLNLSSN 380
P F SLR+LSL N IS++P +N L + +L + +N
Sbjct: 91 RCIPPRTFDGLKSLRLLSLHGND-ISVVPEGAFNDLSALSHLAIGAN 136
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 54 VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLF 113
VT L + G T +P EL N L +DLS N S S NM+ LL++ + N L
Sbjct: 33 VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91
Query: 114 GEIPEELGNLAELETLWLQNN 134
P L L L L N
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGN 112
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 266 ILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLY 325
+ +E+SN +LT I L+ N+++ + + +L L N+L P F L SL
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 326 ELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKL 358
L L GN +S F + ++L L++ +N L
Sbjct: 106 LLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKKVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 141 LGSAGELKIADFG 153
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
L M+D+AL +EYL + +H DL N +L ++M ++DFG++K + D
Sbjct: 150 LKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 141 LGSAGELKIADFG 153
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
LE + F ++ I+H DLK N+LL +NM LSDFG +
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 86 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 141
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 142 LGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 86 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 141
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 142 LGSAGELKIADFG 154
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 141 LVGENHLVKVADFGLSRLM-------TGDTXTAH 167
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 144 LGSAGELKIADFG 156
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
I + + ALE+LH S +IH D+K SNVL+ + DFG++ L+ D
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DDVAKDI 168
Query: 537 TNTCHHRIYGTRRNPQMN 554
C + R NP++N
Sbjct: 169 DAGCKPYMAPERINPELN 186
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 141 LGSAGELKIADFG 153
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFGMA 523
LG+ ++DFG +
Sbjct: 141 LGSAGELKIADFGWS 155
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 409 FGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYMP-HGSLEK---CL 463
FG + AR+++ G AVKV L+ + + DV C M +K +L H L + C
Sbjct: 36 FGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF 93
Query: 464 YSSNYILDIFQRLN-----------IMIDVALALEY-------LHFGYSTPIIHCDLKLS 505
+ + + + + +N D A A Y L F + II+ DLKL
Sbjct: 94 QTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLD 153
Query: 506 NVLLGNNMVAHLSDFGMAK 524
NVLL + L+DFGM K
Sbjct: 154 NVLLDHEGHCKLADFGMCK 172
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
I + + ALE+LH S +IH D+K SNVL+ + DFG++ L+ D
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTI 212
Query: 537 TNTCHHRIYGTRRNPQMN 554
C + R NP++N
Sbjct: 213 DAGCKPYMAPERINPELN 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 88 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG AKLL E++ + HRIY
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 88 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG AKLL E++ + HRIY
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIKVTDFGFAK 190
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 88 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 139
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 171
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT 534
L+I + +A A+E+LH S ++H DLK SN+ + V + DFG+ + ++++ T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 114/266 (42%), Gaps = 49/266 (18%)
Query: 163 VQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLY 222
++ NLE+L+ N S P I + L L L N D+ T +L NL L+L
Sbjct: 195 AKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 250
Query: 223 DNYLTSSTPELSFLYSLSNCK----YLEQSSQSLEVFSMFNCNISGGILEEIS---NLTN 275
+N +++ P LS L L+ K + S + ++ N ++ LE+IS NL N
Sbjct: 251 NNQISNLAP-LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKN 309
Query: 276 LTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLS 335
LT + L N ++ P+ L KLQ L F +NK+ + LA+L
Sbjct: 310 LTYLTLYFNNISDISPV--SSLTKLQRLFFANNKVS-----DVSSLANL----------- 351
Query: 336 GSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI-SPLPLEIGNLK 394
T++ LS N++ + P L NL I L L+ + +P+ N K
Sbjct: 352 ----------TNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV-----NYK 394
Query: 395 VLVGIDLSMNNFSGFGSIYKARIQDG 420
V I ++ N +G I A I DG
Sbjct: 395 ANVSIPNTVKNVTG-ALIAPATISDG 419
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 215 NLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT 274
NL ++N +N LT TP L+ ++ +++ M N I+ + ++NLT
Sbjct: 68 NLTQINFSNNQLTDITP-------------LKNLTKLVDIL-MNNNQIAD--ITPLANLT 111
Query: 275 NLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNK 333
NLT + L N++ P+ L L +L+L S + + L SL +L GN+
Sbjct: 112 NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLSF-GNQ 165
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISI-IPSTLWNLKDILYLN 376
++ P N T+L L + SNK+ I + + L NL+ ++ N
Sbjct: 166 VTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 90 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 145
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 146 LGSAGELKIADFG 158
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 86 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 137
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 169
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 86 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 137
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 138 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 169
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 91 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 142
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 174
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 89 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 144
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 145 LGSAGELKIADFG 157
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 144 LGSAGELKIADFG 156
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIKVTDFGFAK 189
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 90 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 141
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 173
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 143 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 198
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 199 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 258
Query: 566 VNDLLPISVMEVVDVNLL 583
PI + ++ L+
Sbjct: 259 AVGRYPIPPPDAKELELM 276
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 448 KLVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
K+V E P GSL L + +++L R + VA + YL S IH DL
Sbjct: 90 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---SKRFIHRDLAAR 144
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT------CHHRIYGTR--RNPQMNFFS 557
N+LL + + DFG+ + L + D + + C TR + +
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 558 GEMTLKSWVNDLLP-ISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRI 616
G + + P I + ++ + E + + C ++N+ ++C A P+ R
Sbjct: 205 GVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
Query: 617 NAKESVTRLLKIRDLLLK 634
+ +RD LL+
Sbjct: 265 T-------FVALRDFLLE 275
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 84 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 139
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 140 LGSAGELKIADFG 152
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 41/147 (27%)
Query: 409 FGSIYKARIQDGMK--VAVKVFDL----------QYE-------------RAFKSFDVAC 443
FG +YK I + K VA+K+ DL Q E R F S+ +
Sbjct: 32 FGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKST 90
Query: 444 DMMKKLVLEYMPHGS----LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+ +++EY+ GS L+ YI I + ++ L+YLH S IH
Sbjct: 91 KLW--IIMEYLGGGSALDLLKPGPLEETYIATILR------EILKGLDYLH---SERKIH 139
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLL 526
D+K +NVLL L+DFG+A L
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQL 166
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKVFDLQYERA---------------FKSFD--VACDMMK- 447
FG++YK I +G KV + V ++ A S D C ++
Sbjct: 60 GAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 119
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 120 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 176
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 177 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 51 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 110
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 111 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 167
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 168 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 24/157 (15%)
Query: 405 NFSGFGSIYKAR-IQDGMKVAVKVF--DLQYERAF-----KSFDVACDMMKKLVLEYMPH 456
F G ++ AR ++D VAVKV DL + +F + A + ++
Sbjct: 21 GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDT 80
Query: 457 GSLEKCLYSSNYIL----------DIFQRLNIMID------VALALEYLHFGYSTPIIHC 500
G E YI+ DI M +A A + L+F + IIH
Sbjct: 81 GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHR 140
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
D+K +N+L+ + DFG+A+ + S Q
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 82/212 (38%), Gaps = 16/212 (7%)
Query: 163 VQIPNL-ENLLLWGNNFSGAIPHFIFNASK-LSILELQKNSFFDLIPNTFGNLINLKRLN 220
V IP + + L GN S +P F A + L+IL L N + F L L++L+
Sbjct: 27 VGIPAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLD 85
Query: 221 LYDNYLTSSTPELSF-------LYSLSNCKYLE------QSSQSLEVFSMFNCNISGGIL 267
L DN S +F L C E + +L+ + + +
Sbjct: 86 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 145
Query: 268 EEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYEL 327
+ +L NLT ++L GN+++ L L L N++ P+ F L L L
Sbjct: 146 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 205
Query: 328 DLSGNKLSGSIPTCFGNQTSLRILSLDSNKLI 359
L N LS +L+ L L+ N +
Sbjct: 206 YLFANNLSALPTEALAPLRALQYLRLNDNPWV 237
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 7/158 (4%)
Query: 74 NLSSLQTLDLSFNWFSGSI-PSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQ 132
L+ L+ LDLS N S+ P++ + L +++ + L P LA L+ L+LQ
Sbjct: 77 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 136
Query: 133 NNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQ------IPNLENLLLWGNNFSGAIPHFI 186
+N L + V + +L+ LLL N + PH
Sbjct: 137 DNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 196
Query: 187 FNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDN 224
+ +L L L N+ L L L+ L L DN
Sbjct: 197 RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 141 LGSAGELKIADFG 153
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV +Y+P GSL + L LN + +A + YL ++H +L NV
Sbjct: 108 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNV 164
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSF 533
LL + ++DFG+A LL +D+
Sbjct: 165 LLKSPSQVQVADFGVADLLPPDDKQL 190
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 141 LGSAGELKIADFG 153
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG+AK
Sbjct: 174 IDQQGYIKVTDFGLAK 189
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 86 CLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 448 KLVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
K+V E P GSL L + +++L R + VA + YL S IH DL
Sbjct: 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAAR 150
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT------CHHRIYGTR--RNPQMNFFS 557
N+LL + + DFG+ + L + D + + C TR + +
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 558 GEMTLKSWVNDLLP-ISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRI 616
G + + P I + ++ + E + + C ++N+ ++C A P+ R
Sbjct: 211 GVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
Query: 617 NAKESVTRLLKIRDLLLK 634
+ +RD LL+
Sbjct: 271 T-------FVALRDFLLE 281
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 144 LGSAGELKIADFG 156
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 141 LGSAGELKIADFG 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 144 LGSAGELKIADFG 156
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 85 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 140
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 141 LGSAGELKIADFG 153
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 93 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 88 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 145 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 86 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 47/154 (30%)
Query: 408 GFGSIYKARIQD----GMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCL 463
G G+ K ++ G KVAVK+ + Q +S DV + +++ +L+ L
Sbjct: 25 GVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREI-------QNLK--L 72
Query: 464 YSSNYILDIFQRLNIMIDVALALEYLHFG------------------------------- 492
+ +I+ ++Q ++ D+ + +EY+ G
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 493 YSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+ ++H DLK NVLL +M A ++DFG++ ++
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 89
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+++ MP G L + + LN + +A + YL ++H D
Sbjct: 90 CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG AKLL E++ + HRIY
Sbjct: 147 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV +Y+P GSL + L LN + +A + YL ++H +L NV
Sbjct: 90 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNV 146
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSF 533
LL + ++DFG+A LL +D+
Sbjct: 147 LLKSPSQVQVADFGVADLLPPDDKQL 172
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 82 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 137
Query: 509 LGNNMVAHLSDFG 521
LG+ ++DFG
Sbjct: 138 LGSAGELKIADFG 150
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+LD I+ +V LEYLH IH D+K N+LLG + ++DFG++ L
Sbjct: 117 VLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 93 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 150 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 82/212 (38%), Gaps = 16/212 (7%)
Query: 163 VQIPNL-ENLLLWGNNFSGAIPHFIFNASK-LSILELQKNSFFDLIPNTFGNLINLKRLN 220
V IP + + L GN S +P F A + L+IL L N + F L L++L+
Sbjct: 28 VGIPAASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLD 86
Query: 221 LYDNYLTSSTPELSF-------LYSLSNCKYLE------QSSQSLEVFSMFNCNISGGIL 267
L DN S +F L C E + +L+ + + +
Sbjct: 87 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 146
Query: 268 EEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYEL 327
+ +L NLT ++L GN+++ L L L N++ P+ F L L L
Sbjct: 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTL 206
Query: 328 DLSGNKLSGSIPTCFGNQTSLRILSLDSNKLI 359
L N LS +L+ L L+ N +
Sbjct: 207 YLFANNLSALPTEALAPLRALQYLRLNDNPWV 238
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 7/158 (4%)
Query: 74 NLSSLQTLDLSFNWFSGSI-PSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQ 132
L+ L+ LDLS N S+ P++ + L +++ + L P LA L+ L+LQ
Sbjct: 78 GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137
Query: 133 NNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQ------IPNLENLLLWGNNFSGAIPHFI 186
+N L + V + +L+ LLL N + PH
Sbjct: 138 DNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAF 197
Query: 187 FNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDN 224
+ +L L L N+ L L L+ L L DN
Sbjct: 198 RDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
L ++L I VA + YL +H DL N L+G NMV ++DFG+++ +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 530 D 530
D
Sbjct: 228 D 228
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 LVGENHLVKVADFGLSRLM-------TGDTYTAH 169
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 86 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 89 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 86 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 143 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 448 KLVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
K+V E P GSL L + +++L R + VA + YL S IH DL
Sbjct: 90 KMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAAR 144
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT------CHHRIYGTR--RNPQMNFFS 557
N+LL + + DFG+ + L + D + + C TR + +
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 558 GEMTLKSWVNDLLP-ISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRI 616
G + + P I + ++ + E + + C ++N+ ++C A P+ R
Sbjct: 205 GVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
Query: 617 NAKESVTRLLKIRDLLLK 634
+ +RD LL+
Sbjct: 265 T-------FVALRDFLLE 275
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 89 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 28/152 (18%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 32 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 91
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 92 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 148
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF 533
L NVL+ ++DFG+AKLL E++ +
Sbjct: 149 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
+LD I+ +V LEYLH IH D+K N+LLG + ++DFG++ L
Sbjct: 112 VLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 166
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 89 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 146 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 147
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 148 LVGENHLVKVADFGLSRLM-------TGDTYTAH 174
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA +++L S +H DL N +
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 166
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND 568
L ++DFG+A+ + D+ F ++ H++ G +
Sbjct: 167 LDEKFTVKVADFGLARDMY--DKEF----DSVHNKT-GAK-------------------- 199
Query: 569 LLPISVMEVVDVNLLSMEDKYFTTKKQCLSF-VFNLAMECTAESPKQRINAKESVTRLLK 627
LP+ M L S++ + FTTK SF V + P +N + LL+
Sbjct: 200 -LPVKWMA-----LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 253
Query: 628 IRDLL 632
R LL
Sbjct: 254 GRRLL 258
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 142
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 143 LVGENHLVKVADFGLSRLM-------TGDTYTAH 169
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 448 KLVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
K+V E P GSL L + +++L R + VA + YL S IH DL
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ--VAEGMGYLE---SKRFIHRDLAAR 140
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT------CHHRIYGTR--RNPQMNFFS 557
N+LL + + DFG+ + L + D + + C TR + +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 558 GEMTLKSWVNDLLP-ISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRI 616
G + + P I + ++ + E + + C ++N+ ++C A P+ R
Sbjct: 201 GVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
Query: 617 NAKESVTRLLKIRDLLLK 634
+ +RD LL+
Sbjct: 261 T-------FVALRDFLLE 271
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
+A A + L+F + IIH D+K +N+++ + DFG+A+ + S TQ
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 446 MKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
+ ++L YM HG L + + S + ++ + VA +EYL +H DL
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAAR 153
Query: 506 NVLLGNNMVAHLSDFGMAK-LLLKEDQSFTQNTNT 539
N +L + ++DFG+A+ +L +E S Q+ +
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHA 188
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 36 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 95
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 96 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 152
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF 533
L NVL+ ++DFG+AKLL E++ +
Sbjct: 153 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
+A A + L+F + IIH D+K +N+++ + DFG+A+ + S TQ
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 163
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 164 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
Query: 566 VNDLLPISVMEVVDVNLL 583
PI + ++ L+
Sbjct: 224 AVGRYPIPPPDAKELELM 241
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRL-NIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ E+M GSL L S + +L + +A + Y+ IH DL+ +NV
Sbjct: 84 IITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANV 140
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFT 534
L+ +++ ++DFG+A+++ ED +T
Sbjct: 141 LVSESLMCKIADFGLARVI--EDNEYT 165
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 23/198 (11%)
Query: 448 KLVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
K+V E P GSL L + +++L R + VA + YL S IH DL
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAAR 140
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT------CHHRIYGTR--RNPQMNFFS 557
N+LL + + DFG+ + L + D + + C TR + +
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 558 GEMTLKSWVNDLLP-ISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRI 616
G + + P I + ++ + E + + C ++N+ ++C A P+ R
Sbjct: 201 GVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
Query: 617 NAKESVTRLLKIRDLLLK 634
+ +RD LL+
Sbjct: 261 T-------FVALRDFLLE 271
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 451 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLG 510
+EY +G+L ++S N + + + AL Y+H S IIH DLK N+ +
Sbjct: 94 MEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFID 150
Query: 511 NNMVAHLSDFGMAK 524
+ + DFG+AK
Sbjct: 151 ESRNVKIGDFGLAK 164
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 28/152 (18%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 20 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 79
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 80 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 136
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF 533
L NVL+ ++DFG+AKLL E++ +
Sbjct: 137 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA +++L S +H DL N +
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 224
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND 568
L ++DFG+A+ + D+ F ++ H++ G +
Sbjct: 225 LDEKFTVKVADFGLARDMY--DKEF----DSVHNKT-GAK-------------------- 257
Query: 569 LLPISVMEVVDVNLLSMEDKYFTTKKQCLSF-VFNLAMECTAESPKQRINAKESVTRLLK 627
LP+ M L S++ + FTTK SF V + P +N + LL+
Sbjct: 258 -LPVKWMA-----LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 311
Query: 628 IRDLL 632
R LL
Sbjct: 312 GRRLL 316
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA +++L S +H DL N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 165
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND 568
L ++DFG+A+ + D+ F ++ H++ G +
Sbjct: 166 LDEKFTVKVADFGLARDMY--DKEF----DSVHNKT-GAK-------------------- 198
Query: 569 LLPISVMEVVDVNLLSMEDKYFTTKKQCLSF-VFNLAMECTAESPKQRINAKESVTRLLK 627
LP+ M L S++ + FTTK SF V + P +N + LL+
Sbjct: 199 -LPVKWMA-----LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 628 IRDLL 632
R LL
Sbjct: 253 GRRLL 257
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA +++L S +H DL N +
Sbjct: 114 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 170
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND 568
L ++DFG+A+ + D+ F ++ H++ G +
Sbjct: 171 LDEKFTVKVADFGLARDMY--DKEF----DSVHNKT-GAK-------------------- 203
Query: 569 LLPISVMEVVDVNLLSMEDKYFTTKKQCLSF-VFNLAMECTAESPKQRINAKESVTRLLK 627
LP+ M L S++ + FTTK SF V + P +N + LL+
Sbjct: 204 -LPVKWMA-----LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 257
Query: 628 IRDLL 632
R LL
Sbjct: 258 GRRLL 262
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 49/266 (18%)
Query: 163 VQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLY 222
++ NLE+L+ N S P I + L L L N D+ T +L NL L+L
Sbjct: 191 AKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 246
Query: 223 DNYLTSSTPELSFLYSLSNCK----YLEQSSQSLEVFSMFNCNISGGILEEIS---NLTN 275
+N +++ P LS L L+ K + S + ++ N ++ LE+IS NL N
Sbjct: 247 NNQISNLAP-LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKN 305
Query: 276 LTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLS 335
LT + L N ++ P+ L KLQ L F +NK+ D+S
Sbjct: 306 LTYLTLYFNNISDISPV--SSLTKLQRLFFSNNKVS----------------DVS----- 342
Query: 336 GSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI-SPLPLEIGNLK 394
N T++ LS N++ + P L NL I L L+ + +P+ N K
Sbjct: 343 -----SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV-----NYK 390
Query: 395 VLVGIDLSMNNFSGFGSIYKARIQDG 420
V I ++ N +G I A I DG
Sbjct: 391 ANVSIPNTVKNVTG-ALIAPATISDG 415
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 215 NLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT 274
NL ++N +N LT TP L N L +++ M N I+ + ++NLT
Sbjct: 64 NLTQINFSNNQLTDITP-------LKNLTKL------VDIL-MNNNQIAD--ITPLANLT 107
Query: 275 NLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNK 333
NLT + L N++ P+ L L +L+L S + + L SL +L+ GN+
Sbjct: 108 NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLNF-GNQ 161
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISI-IPSTLWNLKDILYLN 376
++ P N T+L L + SNK+ I + + L NL+ ++ N
Sbjct: 162 VTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 203
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIKVTDFGFAK 189
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 262 ISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCK-LQKLQLLSFVDNKLEGPIPYEFCR 320
+S G+ ++ LT L + LA N+L S+P+ + L +L L N+L+ F R
Sbjct: 74 LSAGVFDD---LTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR 129
Query: 321 LASLYELDLSGNKLSGSIPT-CFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSS 379
L L EL L+ N+L SIP F T+L+ LSL +N+L S+ L + + L
Sbjct: 130 LTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188
Query: 380 NFF 382
N F
Sbjct: 189 NQF 191
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 63/165 (38%), Gaps = 28/165 (16%)
Query: 195 LELQKNSFFDLIPNTFGNLINLKRLNL-YDNYLTSSTPELSFLYSLSNCKYLEQSSQSLE 253
L+LQ L TF L L LNL Y+ T S L L
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG------------- 86
Query: 254 VFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGP 313
+ N ++ L +LT L +YL GN+L +L KL+ L N+L+
Sbjct: 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 314 IPYEFCRLASLYELDLSGNKLSGSIP-------------TCFGNQ 345
F +L +L L LS N+L S+P T FGNQ
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQ 190
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 272 NLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSG 331
LT LT + L N+L L +L L +N+L F L L +L L G
Sbjct: 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116
Query: 332 NKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
N+L F T L+ L L++N+L SI L ++ L+LS+N
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 190 SKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSS 249
+KL+ L L N L F +L L L L +N L +S P L L+ L
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLP-LGVFDHLTQLDKLYLGG 116
Query: 250 QSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDN 308
L+ ++ G+ + LT L + L N+L SIP KL LQ LS N
Sbjct: 117 NQLK-------SLPSGVFDR---LTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTN 165
Query: 309 KLEGPIPYEFCRLASLYELDLSGNKLSGS 337
+L+ F RL L + L GN+ S
Sbjct: 166 QLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 23 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 82
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 83 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRD 139
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG+AKLL E++ + HRIY
Sbjct: 140 LAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 262 ISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCK-LQKLQLLSFVDNKLEGPIPYEFCR 320
+S G+ ++ LT L + LA N+L S+P+ + L +L L N+L+ F R
Sbjct: 74 LSAGVFDD---LTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDR 129
Query: 321 LASLYELDLSGNKLSGSIPT-CFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSS 379
L L EL L+ N+L SIP F T+L+ LSL +N+L S+ L + + L
Sbjct: 130 LTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188
Query: 380 NFF 382
N F
Sbjct: 189 NQF 191
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 63/165 (38%), Gaps = 28/165 (16%)
Query: 195 LELQKNSFFDLIPNTFGNLINLKRLNL-YDNYLTSSTPELSFLYSLSNCKYLEQSSQSLE 253
L+LQ L TF L L LNL Y+ T S L L
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELG------------- 86
Query: 254 VFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGP 313
+ N ++ L +LT L +YL GN+L +L KL+ L N+L+
Sbjct: 87 TLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146
Query: 314 IPYEFCRLASLYELDLSGNKLSGSIP-------------TCFGNQ 345
F +L +L L LS N+L S+P T FGNQ
Sbjct: 147 PAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQ 190
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%)
Query: 272 NLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSG 331
LT LT + L N+L L +L L +N+L F L L +L L G
Sbjct: 57 GLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116
Query: 332 NKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
N+L F T L+ L L++N+L SI L ++ L+LS+N
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 190 SKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSS 249
+KL+ L L N L F +L L L L +N L +S P L L+ L
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-ASLP-LGVFDHLTQLDKLYLGG 116
Query: 250 QSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDN 308
L+ ++ G+ + LT L + L N+L SIP KL LQ LS N
Sbjct: 117 NQLK-------SLPSGVFDR---LTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTN 165
Query: 309 KLEGPIPYEFCRLASLYELDLSGNKLSGS 337
+L+ F RL L + L GN+ S
Sbjct: 166 QLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIKVTDFGFAK 190
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIKVTDFGFAK 190
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY P G + L + R + L EYLH S +I+ DLK N++
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIKVTDFGFAK 190
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA +++L S +H DL N +
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 165
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND 568
L ++DFG+A+ + D+ F ++ H++ G +
Sbjct: 166 LDEKFTVKVADFGLARDMY--DKEF----DSVHNKT-GAK-------------------- 198
Query: 569 LLPISVMEVVDVNLLSMEDKYFTTKKQCLSF-VFNLAMECTAESPKQRINAKESVTRLLK 627
LP+ M L S++ + FTTK SF V + P +N + LL+
Sbjct: 199 -LPVKWMA-----LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 252
Query: 628 IRDLL 632
R LL
Sbjct: 253 GRRLL 257
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT 537
+A A + L+F + IIH D+K +N+++ + DFG+A+ + S TQ
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKK----------------- 448
FG +YKA+ ++ + A KV D + E + + V D++
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
+++E+ G+++ + L Q + AL YLH IIH DLK
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 164
Query: 506 NVLLGNNMVAHLSDFGMA 523
N+L + L+DFG++
Sbjct: 165 NILFTLDGDIKLADFGVS 182
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VL YM HG L + + + + + + VA +++L S +H DL N +
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCM 163
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND 568
L ++DFG+A+ + D+ F ++ H++ G +
Sbjct: 164 LDEKFTVKVADFGLARDMY--DKEF----DSVHNKT-GAK-------------------- 196
Query: 569 LLPISVMEVVDVNLLSMEDKYFTTKKQCLSF-VFNLAMECTAESPKQRINAKESVTRLLK 627
LP+ M L S++ + FTTK SF V + P +N + LL+
Sbjct: 197 -LPVKWMA-----LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ 250
Query: 628 IRDLL 632
R LL
Sbjct: 251 GRRLL 255
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 72/281 (25%)
Query: 162 DVQIPNLE-NLL--LWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKR 218
++Q+ NL NLL L+ +NF G +P K++ ++LQKN + TF L L+
Sbjct: 315 NLQVLNLSYNLLGELYSSNFYG-LP-------KVAYIDLQKNHIAIIQDQTFKFLEKLQT 366
Query: 219 LNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTA 278
L+L DN LT+ + F+ S+ ++F +SG L + + NLTA
Sbjct: 367 LDLRDNALTT----IHFIPSIP------------DIF------LSGNKLVTLPKI-NLTA 403
Query: 279 --IYLAGNKL-NGSIPITLCKLQKLQLLSFVDNKL----------EGP------------ 313
I+L+ N+L N I L ++ LQ+L N+ E P
Sbjct: 404 NLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENML 463
Query: 314 -IPYE-------FCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPST 365
+ +E F L+ L L L+ N L+ P F + T+LR LSL+SN+L + +
Sbjct: 464 QLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHND 523
Query: 366 LWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNF 406
L ++ L++S N ++P P +L VL D++ N F
Sbjct: 524 L--PANLEILDISRNQLLAPNPDVFVSLSVL---DITHNKF 559
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 49/266 (18%)
Query: 163 VQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLY 222
++ NLE+L+ N S P I + L L L N D+ T +L NL L+L
Sbjct: 191 AKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 246
Query: 223 DNYLTSSTPELSFLYSLSNCK----YLEQSSQSLEVFSMFNCNISGGILEEIS---NLTN 275
+N +++ P LS L L+ K + S + ++ N ++ LE+IS NL N
Sbjct: 247 NNQISNLAP-LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKN 305
Query: 276 LTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLS 335
LT + L N ++ P+ L KLQ L F +NK+ D+S
Sbjct: 306 LTYLTLYFNNISDISPV--SSLTKLQRLFFYNNKVS----------------DVS----- 342
Query: 336 GSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI-SPLPLEIGNLK 394
N T++ LS N++ + P L NL I L L+ + +P+ N K
Sbjct: 343 -----SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV-----NYK 390
Query: 395 VLVGIDLSMNNFSGFGSIYKARIQDG 420
V I ++ N +G I A I DG
Sbjct: 391 ANVSIPNTVKNVTG-ALIAPATISDG 415
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 215 NLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT 274
NL ++N +N LT TP L+ ++ +++ M N I+ + ++NLT
Sbjct: 64 NLTQINFSNNQLTDITP-------------LKNLTKLVDIL-MNNNQIAD--ITPLANLT 107
Query: 275 NLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNK 333
NLT + L N++ P+ L L +L+L S + + L SL +L+ GN+
Sbjct: 108 NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLNF-GNQ 161
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISI-IPSTLWNLKDILYLN 376
++ P N T+L L + SNK+ I + + L NL+ ++ N
Sbjct: 162 VTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 203
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKK----------------- 448
FG +YKA+ ++ + A KV D + E + + V D++
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
+++E+ G+++ + L Q + AL YLH IIH DLK
Sbjct: 108 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAG 164
Query: 506 NVLLGNNMVAHLSDFGMA 523
N+L + L+DFG++
Sbjct: 165 NILFTLDGDIKLADFGVS 182
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+ G+LE+ + LD L + + ++Y+H S +IH DLK SN+
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNI 167
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHH 542
L + + DFG+ LK D T++ T +
Sbjct: 168 FLVDTKQVKIGDFGLV-TSLKNDGKRTRSKGTLRY 201
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G L K L S D + IM ++A AL Y H +IH D+K N+L
Sbjct: 100 LILEYAPRGELYKELQKSC-TFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLL 155
Query: 509 LGNNMVAHLSDFG 521
LG ++DFG
Sbjct: 156 LGLKGELKIADFG 168
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 136
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 566 VNDLLPISVMEVVDVNLL 583
PI + ++ L+
Sbjct: 197 AVGRYPIPPPDAKELELM 214
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 136
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 566 VNDLLPISVMEVVDVNLL 583
PI + ++ L+
Sbjct: 197 AVGRYPIPPPDAKELELM 214
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 49/266 (18%)
Query: 163 VQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLY 222
++ NLE+L+ N S P I + L L L N D+ T +L NL L+L
Sbjct: 196 AKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDI--GTLASLTNLTDLDLA 251
Query: 223 DNYLTSSTPELSFLYSLSNCK----YLEQSSQSLEVFSMFNCNISGGILEEIS---NLTN 275
+N +++ P LS L L+ K + S + ++ N ++ LE+IS NL N
Sbjct: 252 NNQISNLAP-LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKN 310
Query: 276 LTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLS 335
LT + L N ++ P+ L KLQ L F +NK+ D+S
Sbjct: 311 LTYLTLYFNNISDISPV--SSLTKLQRLFFYNNKVS----------------DVS----- 347
Query: 336 GSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFI-SPLPLEIGNLK 394
N T++ LS N++ + P L NL I L L+ + +P+ N K
Sbjct: 348 -----SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV-----NYK 395
Query: 395 VLVGIDLSMNNFSGFGSIYKARIQDG 420
V I ++ N +G I A I DG
Sbjct: 396 ANVSIPNTVKNVTG-ALIAPATISDG 420
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 215 NLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLT 274
NL ++N +N LT TP L+ ++ +++ M N I+ + ++NLT
Sbjct: 69 NLTQINFSNNQLTDITP-------------LKNLTKLVDIL-MNNNQIAD--ITPLANLT 112
Query: 275 NLTAIYLAGNKLNGSIPI-TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNK 333
NLT + L N++ P+ L L +L+L S + + L SL +L GN+
Sbjct: 113 NLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA-----LSGLTSLQQLSF-GNQ 166
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISI-IPSTLWNLKDILYLN 376
++ P N T+L L + SNK+ I + + L NL+ ++ N
Sbjct: 167 VTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 136
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 566 VNDLLPISVMEVVDVNLL 583
PI + ++ L+
Sbjct: 197 AVGRYPIPPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 136
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 566 VNDLLPISVMEVVDVNLL 583
PI + ++ L+
Sbjct: 197 AVGRYPIPPPDAKELELM 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 24/142 (16%)
Query: 403 MNNFSGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKK------------- 448
+ FG +YKA+ ++ + A KV D + E + + V D++
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 449 -------LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+++E+ G+++ + L Q + AL YLH IIH D
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRD 133
Query: 502 LKLSNVLLGNNMVAHLSDFGMA 523
LK N+L + L+DFG++
Sbjct: 134 LKAGNILFTLDGDIKLADFGVS 155
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
AF++ D C V+EY G L L + R ++ ALEYLH S
Sbjct: 73 AFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 123
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++ D+KL N++L + ++DFG+ K
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ E+M +G+L L N + L + ++ A+EYL IH DL N
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNC 140
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 141 LVGENHLVKVADFGLSRLM-------TGDTFTAH 167
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
AF++ D C V+EY G L L + R ++ ALEYLH S
Sbjct: 73 AFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 123
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++ D+KL N++L + ++DFG+ K
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
AF++ D C V+EY G L L + R ++ ALEYLH S
Sbjct: 73 AFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 123
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++ D+KL N++L + ++DFG+ K
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
AF++ D C V+EY G L L + R ++ ALEYLH S
Sbjct: 73 AFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 123
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++ D+KL N++L + ++DFG+ K
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 87 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 138
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLL 526
N L+G N + ++DFG+++L+
Sbjct: 139 AARNCLVGENHLVKVADFGLSRLM 162
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
AF++ D C V+EY G L L + R ++ ALEYLH S
Sbjct: 76 AFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 126
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++ D+KL N++L + ++DFG+ K
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFG----------YSTPII 498
++ EY +G L L + +L+ I A + LHF S I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 499 HCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
H D+ NVLL N VA + DFG+A+ ++ +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
AF++ D C V+EY G L L + R ++ ALEYLH S
Sbjct: 78 AFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 128
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++ D+KL N++L + ++DFG+ K
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
AF++ D C V+EY G L L + R ++ ALEYLH S
Sbjct: 73 AFQTHDRLC-----FVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH---S 123
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++ D+KL N++L + ++DFG+ K
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+LV + MP+G L + + L LN + +A + YL ++H DL NV
Sbjct: 94 QLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNV 150
Query: 508 LLGNNMVAHLSDFGMAKLL 526
L+ + ++DFG+A+LL
Sbjct: 151 LVKSPNHVKITDFGLARLL 169
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L Y LD+ + ++ AL YL S +H D+ NVL
Sbjct: 115 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 171
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +N L DFG+++ + ED ++ + +
Sbjct: 172 VSSNDCVKLGDFGLSRYM--EDSTYYKASK 199
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I + LA YL + I+H D+K SN+
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA--YLREKHQ--IMHRDVKPSNI 146
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 147 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
Query: 566 VNDLLPI 572
PI
Sbjct: 207 AVGRYPI 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L Y LD+ + ++ AL YL S +H D+ NVL
Sbjct: 90 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 146
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +N L DFG+++ + ED ++ + +
Sbjct: 147 VSSNDCVKLGDFGLSRYM--EDSTYYKASK 174
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH DL
Sbjct: 88 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDL 139
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLL 526
N L+G N + ++DFG+++L+
Sbjct: 140 AARNCLVGENHLVKVADFGLSRLM 163
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 63/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 88 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG AKLL E++ + HRIY
Sbjct: 145 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L Y LD+ + ++ AL YL S +H D+ NVL
Sbjct: 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 148
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +N L DFG+++ + ED ++ + +
Sbjct: 149 VSSNDCVKLGDFGLSRYM--EDSTYYKASK 176
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 63/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAVKV-----------------FDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + V D Y A C ++
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 93 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG AKLL E++ + HRIY
Sbjct: 150 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L Y LD+ + ++ AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +N L DFG+++ + ED ++ + +
Sbjct: 144 VSSNDCVKLGDFGLSRYM--EDSTYYKASK 171
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L Y LD+ + ++ AL YL S +H D+ NVL
Sbjct: 89 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 145
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +N L DFG+++ + ED ++ + +
Sbjct: 146 VSSNDCVKLGDFGLSRYM--EDSTYYKASK 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 38/174 (21%)
Query: 407 SGFGSIYKA-RIQDGMKVAV-----------------KVFDLQYERAFKSFDVACDMMK- 447
FG++YK I +G KV + ++ D Y A C ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 448 ------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCD 501
+L+ + MP G L + + LN + +A + YL ++H D
Sbjct: 86 CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH----------HRIY 545
L NVL+ ++DFG AKLL E++ + HRIY
Sbjct: 143 LAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+EY G + L + + + R + A++Y H Y I+H DLK N+L
Sbjct: 91 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHRDLKAENLL 146
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 147 LDGDMNIKIADFGFS 161
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 22/226 (9%)
Query: 179 SGAIPHFIFNASKLSILELQKNSFFDL--IPNTFGNLINLKRLNLYDN---YLTSSTPEL 233
S +P F A +LS L+ L +P+T L+ L L N L +S L
Sbjct: 90 SVPLPQFPDQAFRLSHLQHXTIDAAGLXELPDTXQQFAGLETLTLARNPLRALPASIASL 149
Query: 234 SFLYSLS--NCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIP 291
+ L LS C L + + L + + SG E L NL ++ L + S+P
Sbjct: 150 NRLRELSIRACPELTELPEPL-----ASTDASG----EHQGLVNLQSLRLEWTGIR-SLP 199
Query: 292 ITLCKLQKLQLLSFVDNKLE--GPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLR 349
++ LQ L+ L ++ L GP + L L ELDL G + P FG + L+
Sbjct: 200 ASIANLQNLKSLKIRNSPLSALGPAIHH---LPKLEELDLRGCTALRNYPPIFGGRAPLK 256
Query: 350 ILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKV 395
L L + +P + L + L+L +S LP I L
Sbjct: 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L Y LD+ + ++ AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +N L DFG+++ + ED ++ + +
Sbjct: 144 VSSNDCVKLGDFGLSRYM--EDSTYYKASK 171
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
I + + ALE+LH S +IH D+K SNVL+ DFG++ L+ D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLV--DDVAKDI 195
Query: 537 TNTCHHRIYGTRRNPQMN 554
C R NP++N
Sbjct: 196 DAGCKPYXAPERINPELN 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L Y LD+ + ++ AL YL S +H D+ NVL
Sbjct: 84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 140
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ +N L DFG+++ + ED ++ + +
Sbjct: 141 VSSNDCVKLGDFGLSRYM--EDSTYYKASK 168
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 32/159 (20%)
Query: 388 LEIGNLKVLVGIDLSMNNFSGFGSIYKAR-IQDGMKVAVKVFD----------------- 429
L IGN ++L I F + AR I G +VAVK+ D
Sbjct: 4 LHIGNYRLLKTI-----GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR 58
Query: 430 ----LQYERAFKSFDV-ACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAL 484
L + K F+V + LV+EY G + L + ++ + R +
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVS 117
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
A++Y H + I+H DLK N+LL +M ++DFG +
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
D+ +EYLH+ IIH D+K SN+L+G + ++DFG++
Sbjct: 145 DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 479 MIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+ ++ALAL++LH S II+ DLK N+LL L+DFG++K
Sbjct: 132 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 102 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 155
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 156 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 210
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 211 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 267
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 268 RIMTQCWQHQPEDRPN 283
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 168
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 169 IDQQGYIQVTDFGFAK 184
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 125 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 178
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 179 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 233
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 234 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 290
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 291 RIMTQCWQHQPEDRPN 306
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E + G L + L + L ++ D A +EYL S IH DL N L
Sbjct: 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCL 245
Query: 509 LGNNMVAHLSDFGMAK 524
+ V +SDFGM++
Sbjct: 246 VTEKNVLKISDFGMSR 261
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 479 MIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+ ++ALAL++LH S II+ DLK N+LL L+DFG++K
Sbjct: 132 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 479 MIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+ ++ALAL++LH S II+ DLK N+LL L+DFG++K
Sbjct: 133 LAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 164
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 165 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 219
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 220 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 277 RIMTQCWQHQPEDRPN 292
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 117 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 170
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 171 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 225
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 226 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 282
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 283 RIMTQCWQHQPEDRPN 298
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 125 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 178
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 179 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 233
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 234 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 290
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 291 RIMTQCWQHQPEDRPN 306
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E + G L + L + L ++ D A +EYL S IH DL N L
Sbjct: 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCL 245
Query: 509 LGNNMVAHLSDFGMAK 524
+ V +SDFGM++
Sbjct: 246 VTEKNVLKISDFGMSR 261
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 195 IDQQGYIQVTDFGFAK 210
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 111 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 164
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 165 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 219
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 220 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 277 RIMTQCWQHQPEDRPN 292
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 33/146 (22%)
Query: 409 FGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYMPHGSL-------- 459
FG ++KAR + G KVA+K ++ E+ + F + + + +L+ + H ++
Sbjct: 31 FGEVFKARHRKTGQKVALKKVLMENEK--EGFPITA-LREIKILQLLKHENVVNLIEICR 87
Query: 460 ------EKCLYSSNYILDIFQR------LNIMIDVALA---------LEYLHFGYSTPII 498
+C S + D + N+++ L+ L L++ + I+
Sbjct: 88 TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 147
Query: 499 HCDLKLSNVLLGNNMVAHLSDFGMAK 524
H D+K +NVL+ + V L+DFG+A+
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 87 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 142
Query: 509 LGNNMVAHLSDFG 521
LG+ +++FG
Sbjct: 143 LGSAGELKIANFG 155
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 110 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 163
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 218
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 219 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 275
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 276 RIMTQCWQHQPEDRPN 291
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 23/198 (11%)
Query: 448 KLVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
K+V E P GSL L + +++L R + VA + YL S IH DL
Sbjct: 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAAR 150
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT------CHHRIYGTR--RNPQMNFFS 557
N+LL + + DFG+ + L + D + C TR + +
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 558 GEMTLKSWVNDLLP-ISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRI 616
G + + P I + ++ + E + + C ++N+ ++C A P+ R
Sbjct: 211 GVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
Query: 617 NAKESVTRLLKIRDLLLK 634
+ +RD LL+
Sbjct: 271 T-------FVALRDFLLE 281
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 136
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 137 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 566 VNDLLPI 572
PI
Sbjct: 197 AVGRYPI 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH +L
Sbjct: 290 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRNL 341
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 342 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 373
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L V+ L
Sbjct: 55 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 114
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISI 361
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI
Sbjct: 115 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 165
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD-IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
+ +E+M GSL++ L + I + I +++I V L YL + I+H D+K SN+
Sbjct: 100 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNI 155
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT--CHHRIYGTRRNPQMNFFSGEMTLKSW 565
L+ + L DFG++ L+ + T + R+ GT + Q + +S ++L
Sbjct: 156 LVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 215
Query: 566 VNDLLPIS 573
PI
Sbjct: 216 AVGRYPIG 223
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L V+ L
Sbjct: 54 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 113
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISI 361
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI
Sbjct: 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 465 SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIHCDLKLSNVLL---GNNMVAHLS 518
SS +LD+ L++ D+A +YL HF IH D+ N LL G VA +
Sbjct: 150 SSLAMLDL---LHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIG 200
Query: 519 DFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLK--SWVNDLLPISVME 576
DFGMA+ + + S+ + + + P F G T K +W +L + E
Sbjct: 201 DFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFMEGIFTSKTDTWSFGVL---LWE 252
Query: 577 VVDVNLLSMEDK------YFTT-------KKQCLSFVFNLAMECTAESPKQRIN 617
+ + + K F T K C V+ + +C P+ R N
Sbjct: 253 IFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 272 NLTNLTAIYLAGNKLNGSIPITLC-KLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLS 330
+L NL +YL N+L G++P+ + L +L +L N+L F RL L EL +
Sbjct: 62 SLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMC 120
Query: 331 GNKLSGSIPTCFGNQTSLRILSLDSNKLISI 361
NKL+ +P T L L+LD N+L SI
Sbjct: 121 CNKLT-ELPRGIERLTHLTHLALDQNQLKSI 150
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 284 NKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPT-CF 342
+K + S+P + Q+L DN++ P F L +L EL L N+L G++P F
Sbjct: 28 SKRHASVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVF 84
Query: 343 GNQTSLRILSLDSNKLISIIPSTLWN 368
+ T L +L L +N+L +++PS +++
Sbjct: 85 DSLTQLTVLDLGTNQL-TVLPSAVFD 109
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 127 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 180
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 181 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 235
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 236 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 292
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 293 RIMTQCWQHQPEDRPN 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKK------------------ 448
FG + KA+ + VA+K + + ER K+F V + +
Sbjct: 20 GAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNPVC 76
Query: 449 LVLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
LV+EY GSL L+ + + ++ + + + YLH +IH DLK N
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 507 VLL-GNNMVAHLSDFGMA 523
+LL V + DFG A
Sbjct: 137 LLLVAGGTVLKICDFGTA 154
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 20/188 (10%)
Query: 191 KLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQ 250
KL L + KN ++ PN +L+ L+ ++DN + P+ F L N +E
Sbjct: 103 KLQKLYISKNHLVEIPPNLPSSLVELR---IHDNRI-RKVPKGVF-SGLRNMNCIEMGGN 157
Query: 251 SLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKL 310
LE N G + + L + ++ KL G IP L + L L NK+
Sbjct: 158 PLE-----NSGFEPGAFDGLK----LNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205
Query: 311 EGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLK 370
+ + R + LY L L N++ +LR L LD+NKL S +P+ L +LK
Sbjct: 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL-SRVPAGLPDLK 264
Query: 371 --DILYLN 376
++YL+
Sbjct: 265 LLQVVYLH 272
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L V+ L
Sbjct: 56 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 115
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISI 361
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI
Sbjct: 116 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 166
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY P G++ + L + D + + ++A AL Y H S +IH D+K N+L
Sbjct: 88 LILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLL 143
Query: 509 LGNNMVAHLSDFG 521
LG+ +++FG
Sbjct: 144 LGSAGELKIANFG 156
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 69/174 (39%), Gaps = 38/174 (21%)
Query: 465 SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIHCDLKLSNVLL---GNNMVAHLS 518
SS +LD+ L++ D+A +YL HF IH D+ N LL G VA +
Sbjct: 135 SSLAMLDL---LHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIG 185
Query: 519 DFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMTLK--SWVNDLLPISVME 576
DFGMA+ + + S+ + + + P F G T K +W +L + E
Sbjct: 186 DFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFMEGIFTSKTDTWSFGVL---LWE 237
Query: 577 VVDVNLLSMEDK------YFTT-------KKQCLSFVFNLAMECTAESPKQRIN 617
+ + + K F T K C V+ + +C P+ R N
Sbjct: 238 IFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 448 KLVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLS 505
K+V E P GSL L + +++L R + VA + YL S IH DL
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAAR 140
Query: 506 NVLLGNNMVAHLSDFGMAKLLLKED 530
N+LL + + DFG+ + L + D
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQND 165
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 36/234 (15%)
Query: 175 GNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELS 234
G +F G F + L L+L N + N G L L+ L+ + L + E S
Sbjct: 63 GLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLKQMS-EFS 120
Query: 235 FLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITL 294
SL N YL+ S V FN GI + L++L + +AGN
Sbjct: 121 VFLSLRNLIYLDISHTHTRV--AFN-----GIF---NGLSSLEVLKMAGN---------- 160
Query: 295 CKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLD 354
SF +N L P F L +L LDLS +L PT F + +SL++L++
Sbjct: 161 ---------SFQENFL----PDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207
Query: 355 SNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNL-KVLVGIDLSMNNFS 407
N S+ L + L+ S N ++ E+ + L ++L+ N+F+
Sbjct: 208 HNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 436 FKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYST 495
+ +F+ D++ LV+EY+ G L + +Y L + M + + ++H Y
Sbjct: 152 YDAFESKNDIV--LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY-- 207
Query: 496 PIIHCDLKLSNVLLGNNMVAHLS--DFGMAK 524
I+H DLK N+L N + DFG+A+
Sbjct: 208 -ILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKK------------------ 448
FG + KA+ + VA+K + + ER K+F V + +
Sbjct: 19 GAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLNPVC 75
Query: 449 LVLEYMPHGSLEKCLYSSNYI--LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
LV+EY GSL L+ + + ++ + + + YLH +IH DLK N
Sbjct: 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 507 VLL-GNNMVAHLSDFGMA 523
+LL V + DFG A
Sbjct: 136 LLLVAGGTVLKICDFGTA 153
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI------DVALALEYLHFGYSTPIIHCDL 502
++ E+M +G+L L N Q +N ++ ++ A+EYL IH +L
Sbjct: 332 IITEFMTYGNLLDYLRECNR-----QEVNAVVLLYMATQISSAMEYLE---KKNFIHRNL 383
Query: 503 KLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
N L+G N + ++DFG+++L+ T +T T H
Sbjct: 384 AARNCLVGENHLVKVADFGLSRLM-------TGDTYTAH 415
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 33/146 (22%)
Query: 409 FGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYMPHGSL-------- 459
FG ++KAR + G KVA+K ++ E+ + F + + + +L+ + H ++
Sbjct: 31 FGEVFKARHRKTGQKVALKKVLMENEK--EGFPITA-LREIKILQLLKHENVVNLIEICR 87
Query: 460 ------EKCLYSSNYILDIFQR------LNIMIDVALA---------LEYLHFGYSTPII 498
+C S + D + N+++ L+ L L++ + I+
Sbjct: 88 TKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 147
Query: 499 HCDLKLSNVLLGNNMVAHLSDFGMAK 524
H D+K +NVL+ + V L+DFG+A+
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L V+ L
Sbjct: 55 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 114
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISI 361
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI
Sbjct: 115 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 165
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 175 IDQQGYIQVTDFGFAK 190
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E P+G L L + L + + + + A+ YL S +H D+ + N+L
Sbjct: 101 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNIL 157
Query: 509 LGNNMVAHLSDFGMAKLLLKED 530
+ + L DFG+++ + ED
Sbjct: 158 VASPECVKLGDFGLSRYIEDED 179
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E P+G L L + L + + + + A+ YL S +H D+ + N+L
Sbjct: 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNIL 145
Query: 509 LGNNMVAHLSDFGMAKLLLKED 530
+ + L DFG+++ + ED
Sbjct: 146 VASPECVKLGDFGLSRYIEDED 167
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 321 LASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
L L L L+GN + P F TSL L KL S+ + L + LN++ N
Sbjct: 79 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 138
Query: 381 FFIS-PLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYERAFKSF 439
F S LP NL LV +DLS N IQ + V DLQ+ R
Sbjct: 139 FIHSCKLPAYFSNLTNLVHVDLSYN-----------YIQ-----TITVNDLQFLRENPQV 182
Query: 440 DVACDM 445
+++ DM
Sbjct: 183 NLSLDM 188
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 273 LTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGN 332
L +L+ + L GN + P + L L+ L V+ KL + +L +L +L+++ N
Sbjct: 79 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 138
Query: 333 KL-SGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPL 386
+ S +P F N T+L + L N + +I + L L++ +NLS + ++P+
Sbjct: 139 FIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI 193
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 277 TAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSG 336
T + +G L S+P + Q+L DN++ P F RL L LDL N+L+
Sbjct: 12 TTVDCSGKSL-ASVPTGI--PTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTV 68
Query: 337 SIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFF 382
F T L LSL+ N+L SI NL+ + ++ L +N +
Sbjct: 69 LPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPW 114
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 137 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 190
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + S+ + + + P F
Sbjct: 191 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR--ASYYRKGGCA---MLPVKWMPPEAFM 245
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 246 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 302
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 303 RIMTQCWQHQPEDRPN 318
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 191 KLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQ 250
L +L+L +NS + F L +L L L+DN+LT P +F Y LS + L +
Sbjct: 100 HLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEY-LSKLRELWLRNN 157
Query: 251 SLEVFSMFNCNISGGILE-EISNLTNLTAIYLAGNKLNG-----SIPITLCKLQKLQLLS 304
+E + N ++ ++ L L Y++ G + + +C ++ + L+
Sbjct: 158 PIESIPSYAFNRVPSLMRLDLGELKKLE--YISEGAFEGLFNLKYLNLGMCNIKDMPNLT 215
Query: 305 FVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPS 364
L L EL++SGN P F +SL+ L + ++++ I +
Sbjct: 216 ---------------PLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERN 260
Query: 365 TLWNLKDILYLNLSSNFFISPLPLEI-GNLKVLVGIDLSMNNF 406
L ++ LNL+ N +S LP ++ L+ LV + L N +
Sbjct: 261 AFDGLASLVELNLAHN-NLSSLPHDLFTPLRYLVELHLHHNPW 302
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 63/166 (37%), Gaps = 19/166 (11%)
Query: 75 LSSLQTLDLSFNWFSGSIPSSIFN-MSSLLSIYFNNNTL-------FGEIPE----ELGN 122
L+SL TL+L NW + IPS F +S L ++ NN + F +P +LG
Sbjct: 122 LASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE 180
Query: 123 LAELETLWLQNNFLTGTXXXXXXXXXXXXXXXXXXXXXTDVQIPNLENLLLWGNNFSGAI 182
L +LE + G + LE L + GN+F
Sbjct: 181 LKKLEYI------SEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIR 234
Query: 183 PHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTS 228
P S L L + + + N F L +L LNL N L+S
Sbjct: 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E P+G L L + L + + + + A+ YL S +H D+ + N+L
Sbjct: 85 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNIL 141
Query: 509 LGNNMVAHLSDFGMAKLLLKED 530
+ + L DFG+++ + ED
Sbjct: 142 VASPECVKLGDFGLSRYIEDED 163
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 321 LASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
L L L L+GN + P F TSL L KL S+ + L + LN++ N
Sbjct: 74 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 133
Query: 381 FFIS-PLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYERAFKSF 439
F S LP NL LV +DLS N IQ + V DLQ+ R
Sbjct: 134 FIHSCKLPAYFSNLTNLVHVDLSYN-----------YIQ-----TITVNDLQFLRENPQV 177
Query: 440 DVACDM 445
+++ DM
Sbjct: 178 NLSLDM 183
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 273 LTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGN 332
L +L+ + L GN + P + L L+ L V+ KL + +L +L +L+++ N
Sbjct: 74 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 133
Query: 333 KL-SGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPL 386
+ S +P F N T+L + L N + +I + L L++ +NLS + ++P+
Sbjct: 134 FIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI 188
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 301 QLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLIS 360
Q+L DN++ P F RL L LDL N+L+ F T L LSL+ N+L S
Sbjct: 41 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS 100
Query: 361 IIPSTLWNLKDILYLNLSSNFF 382
I NLK + ++ L +N +
Sbjct: 101 IPRGAFDNLKSLTHIWLLNNPW 122
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 171
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 301 QLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLIS 360
Q+L DN++ P F RL L LDL N+L+ F T L LSL+ N+L S
Sbjct: 33 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS 92
Query: 361 IIPSTLWNLKDILYLNLSSNFF 382
I NLK + ++ L +N +
Sbjct: 93 IPRGAFDNLKSLTHIWLLNNPW 114
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 160
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 161 IDEQGYIQVTDFGFAK 176
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 195 IDQQGYIQVTDFGFAK 210
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N+L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 128 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 181
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + + C + + P F
Sbjct: 182 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---AGYYRKGGCA--MLPVKWMPPEAFM 236
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 237 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 293
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 294 RIMTQCWQHQPEDRPN 309
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 491 FGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
F +S IIH D+K N+L+ + V L DFG A+ L + + T +R
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 41/196 (20%)
Query: 449 LVLEYMPHGSLEKCLY------SSNYILDIFQRLNIMIDVALALEYL---HFGYSTPIIH 499
++LE M G L+ L S L + L++ D+A +YL HF IH
Sbjct: 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IH 204
Query: 500 CDLKLSNVLL---GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFF 556
D+ N LL G VA + DFGMA+ + + + C + + P F
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYR---AGYYRKGGCA--MLPVKWMPPEAFM 259
Query: 557 SGEMTLK--SWVNDLLPISVMEVVDVNLLSMEDK------YFTT-------KKQCLSFVF 601
G T K +W +L + E+ + + K F T K C V+
Sbjct: 260 EGIFTSKTDTWSFGVL---LWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 316
Query: 602 NLAMECTAESPKQRIN 617
+ +C P+ R N
Sbjct: 317 RIMTQCWQHQPEDRPN 332
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 449 LVLEYMPHGSLEKCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507
++ E+M +G+L L N + L + ++ A+EYL IH +L N
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNC 349
Query: 508 LLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
L+G N + ++DFG+++L+ T +T T H
Sbjct: 350 LVGENHLVKVADFGLSRLM-------TGDTYTAH 376
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 33/146 (22%)
Query: 409 FGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYMPHGSL-------- 459
FG ++KAR + G KVA+K ++ E+ + F + + + +L+ + H ++
Sbjct: 31 FGEVFKARHRKTGQKVALKKVLMENEK--EGFPITA-LREIKILQLLKHENVVNLIEICR 87
Query: 460 ------EKCLYSSNYILDIFQR------LNIMIDVALA---------LEYLHFGYSTPII 498
+C S + D + N+++ L+ L L++ + I+
Sbjct: 88 TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 147
Query: 499 HCDLKLSNVLLGNNMVAHLSDFGMAK 524
H D+K +NVL+ + V L+DFG+A+
Sbjct: 148 HRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 174
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 478 IMIDVALALEYLHFGYSTPIIHCDLKLSNVLL----GNNMVAHLSDFGMAKLLLKED 530
++ + +EYLH S ++H DLK SN+L GN + DFG AK L E+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 33/146 (22%)
Query: 409 FGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYMPHGSL-------- 459
FG ++KAR + G KVA+K ++ E+ + F + + + +L+ + H ++
Sbjct: 30 FGEVFKARHRKTGQKVALKKVLMENEK--EGFPITA-LREIKILQLLKHENVVNLIEICR 86
Query: 460 ------EKCLYSSNYILDIFQR------LNIMIDVALA---------LEYLHFGYSTPII 498
+C S + D + N+++ L+ L L++ + I+
Sbjct: 87 TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 146
Query: 499 HCDLKLSNVLLGNNMVAHLSDFGMAK 524
H D+K +NVL+ + V L+DFG+A+
Sbjct: 147 HRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
A+EY H I+H DLK N+LL +N+ ++DFG++ ++
Sbjct: 120 AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++T T +R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528
VA +E+L S IH DL N+LL N V + DFG+A+ + K
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 409 FGSIYKARIQD-GMKVAVKVF-DLQYERAFKSFDV-ACDMMKKL-------VLEYMP--- 455
+G ++K R +D G VA+K F + + + K + M+K+L +LE
Sbjct: 16 YGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR 75
Query: 456 --HGSLEKCLYSSNYILDIFQR---LNIMIDVAL-ALEYLHFGYSTPIIHCDLKLSNVLL 509
H E C ++ + LD +QR +++ + L+ ++F + IH D+K N+L+
Sbjct: 76 RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI 135
Query: 510 GNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
+ V L DFG A+LL + T +R
Sbjct: 136 TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYR 169
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 478 IMIDVALALEYLHFGYSTPIIHCDLKLSNVLL----GNNMVAHLSDFGMAKLLLKED 530
++ + +EYLH S ++H DLK SN+L GN + DFG AK L E+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 32/124 (25%)
Query: 398 GIDLSMNNF------SGFGSIYKARIQDGMKVAVKVFDLQ--YERAFKSFDVACDMMK-- 447
GID NF + G ++K R Q G + VKV ++ R + F+ C ++
Sbjct: 6 GIDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 448 --------------------KLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALAL 486
L+ + P+GSL L+ +N+++D Q + +D A
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 487 EYLH 490
+LH
Sbjct: 125 AFLH 128
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 38/166 (22%)
Query: 409 FGSIYKAR-IQDGMKVA---VKVFDLQYERAFKSFDVACDMMKKL--------------- 449
F +Y+A + DG+ VA V++FDL +A D++K+L
Sbjct: 45 FSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED 104
Query: 450 -----VLEYMPHGSLEKCLYSSNYILDIFQRLNI---MIDVALALEYLHFGYSTPIIHCD 501
VLE G L + + + + + + ALE++H S ++H D
Sbjct: 105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRD 161
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGT 547
+K +NV + V L D G+ + F + T H + GT
Sbjct: 162 IKPANVFITATGVVKLGDLGLGR--------FFSSKTTAAHSLVGT 199
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+EY+ G + L + R + L EYLH S +I+ DLK N++
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLI 173
Query: 509 LGNNMVAHLSDFGMAK 524
+ ++DFG AK
Sbjct: 174 IDQQGYIQVTDFGFAK 189
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L + LD+ + ++ AL YL S +H D+ NVL
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSF 533
+ +N L DFG+++ + ED ++
Sbjct: 524 VSSNDCVKLGDFGLSRYM--EDSTY 546
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHL 517
SL++ + L Q + D LAL +LH S ++H D+K +N+ LG L
Sbjct: 142 SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKL 198
Query: 518 SDFGM 522
DFG+
Sbjct: 199 GDFGL 203
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++YLH + +IH DLKL N+ L ++M + DFG+A
Sbjct: 138 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
+ L +YLH +IH DLKL N+ L ++ + DFG+A
Sbjct: 148 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
+ L +YLH +IH DLKL N+ L ++ + DFG+A
Sbjct: 124 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
+ L +YLH +IH DLKL N+ L ++ + DFG+A
Sbjct: 150 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
++M + L++LH S ++H DLK N+L+ ++ L+DFG+A++
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++YLH + +IH DLKL N+ L ++M + DFG+A
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
++M + L++LH S ++H DLK N+L+ ++ L+DFG+A++
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
++M + L++LH S ++H DLK N+L+ ++ L+DFG+A++
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
+ L +YLH +IH DLKL N+ L ++ + DFG+A
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++YLH + +IH DLKL N+ L ++M + DFG+A
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++YLH + +IH DLKL N+ L ++M + DFG+A
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 479 MIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+ ++AL L++LH S II+ DLK N+LL L+DFG++K
Sbjct: 136 LAELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
+ L +YLH +IH DLKL N+ L ++ + DFG+A
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
+ L +YLH +IH DLKL N+ L ++ + DFG+A
Sbjct: 130 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 279 IYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGN-KLSGS 337
I+L GN+++ + + L +L N L G F L L +LDLS N +L
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVV 95
Query: 338 IPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
PT F L L LD L + P L + YL L N
Sbjct: 96 DPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN 138
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 183 PHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNC 242
P + L L LQ N+ L NTF +L NL L L+ N + S PE +F
Sbjct: 121 PGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRI-PSVPEHAF------- 172
Query: 243 KYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQL 302
+ SL+ + +++ +L L +YL N L+ L L+ LQ
Sbjct: 173 ----RGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQY 228
Query: 303 LSFVDN 308
L DN
Sbjct: 229 LRLNDN 234
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 275 NLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDN-KLEGPIPYEFCRLASLYELDLSGNK 333
NLT ++L N L G L L+ L DN +L P F L L+ L L
Sbjct: 56 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCG 115
Query: 334 LSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFIS 384
L P F +L+ L L N L ++ +T +L ++ +L L N S
Sbjct: 116 LQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPS 166
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 80/223 (35%), Gaps = 38/223 (17%)
Query: 169 ENLLLWGNNFSGAIPHFIFNASK-LSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLT 227
+ + L GN S +P F + + L+IL L N+ + F L L++L+L DN
Sbjct: 34 QRIFLHGNRIS-YVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQL 92
Query: 228 SSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLN 287
+F L +L ++L L
Sbjct: 93 RVVDPTTF-----------------------------------RGLGHLHTLHLDRCGLQ 117
Query: 288 GSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTS 347
P L LQ L DN L+ F L +L L L GN++ F S
Sbjct: 118 ELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHS 177
Query: 348 LRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEI 390
L L L N + + P +L ++ L L +N +S LP E+
Sbjct: 178 LDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN-NLSMLPAEV 219
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 252 LEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311
L+V + C I +L++L+ + L GN + L LQ L ++ L
Sbjct: 56 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNLA 115
Query: 312 GPIPYEFCRLASLYELDLSGNKL-SGSIPTCFGNQTSLRILSLDSNKLISI 361
+ L +L EL+++ N + S +P F N T+L L L SNK+ SI
Sbjct: 116 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 166
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 448 KLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVAL-ALEYLHFGYSTPIIHCDLKLS 505
K+ +E +P GSL L S + D Q + L L+YLH I+H D+K
Sbjct: 95 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGD 151
Query: 506 NVLLGN-NMVAHLSDFGMAKLL 526
NVL+ + V +SDFG +K L
Sbjct: 152 NVLINTYSGVLKISDFGTSKRL 173
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 126 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYL---ASKKCIHRDLAARNVLVTED 175
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 176 NVMKIADFGLAR 187
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 451 LEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLG 510
+EY + +L ++S N + + + AL Y+H S IIH DLK N+ +
Sbjct: 94 MEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFID 150
Query: 511 NNMVAHLSDFGMAK 524
+ + DFG+AK
Sbjct: 151 ESRNVKIGDFGLAK 164
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 74 NLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQN 133
+L+ L+ L++ N S S + N+S L S++ NNN L E E +G L L TL+L
Sbjct: 263 DLTKLKXLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQ 320
Query: 134 NFLT 137
N +T
Sbjct: 321 NHIT 324
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYL---ASKKCIHRDLAARNVLVTED 186
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 187 NVMKIADFGLAR 198
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 27/131 (20%)
Query: 420 GMKVAVKVFDLQYE-------------RAFKSFDVACDMMKK--------LVLEYMPHGS 458
G +VAVK+ DL+ + R ++ F+V +M K +++E++ G+
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVV-EMYKSYLVGEELWVLMEFLQGGA 128
Query: 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLS 518
L + S L+ Q + V AL YLH + +IH D+K ++LL + LS
Sbjct: 129 LTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 519 DFGMAKLLLKE 529
DFG + K+
Sbjct: 184 DFGFCAQISKD 194
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VLE M G L + + + + +L + LA++YLH IIH DLK NVL
Sbjct: 230 IVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLH---ENGIIHRDLKPENVL 285
Query: 509 LGN---NMVAHLSDFGMAKLL 526
L + + + ++DFG +K+L
Sbjct: 286 LSSQEEDCLIKITDFGHSKIL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 130 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYL---ASKKCIHRDLAARNVLVTED 179
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 180 NVMKIADFGLAR 191
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 129 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYL---ASKKCIHRDLAARNVLVTED 178
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 179 NVMKIADFGLAR 190
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VLE M G L + + + + +L + LA++YLH IIH DLK NVL
Sbjct: 216 IVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLH---ENGIIHRDLKPENVL 271
Query: 509 LGN---NMVAHLSDFGMAKLL 526
L + + + ++DFG +K+L
Sbjct: 272 LSSQEEDCLIKITDFGHSKIL 292
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYL---ASKKCIHRDLAARNVLVTED 171
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 172 NVMKIADFGLAR 183
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+EY G + L + + + R + A++Y H + I+H DLK N+L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 146 LDADMNIKIADFGFS 160
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 178 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNVLVTED 227
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 228 NVMKIADFGLAR 239
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+EY G + L + + + R + A++Y H + I+H DLK N+L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 146 LDADMNIKIADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+EY G + L + + + R + A++Y H + I+H DLK N+L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 146 LDADMNIKIADFGFS 160
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFG----------YSTPII 498
++ EY +G L L + +L+ I + LHF S I
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 499 HCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
H D+ NVLL N VA + DFG+A+ ++ +
Sbjct: 187 HRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 420 GMKVAVKVFDLQYERAFK------------SFDVACDMMKK--------LVLEYMPHGSL 459
G +VAVK DL+ ++ + D DM +V+E++ G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSD 519
+ + ++ Q + + V AL YLH + +IH D+K ++LL ++ LSD
Sbjct: 130 TDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSD 184
Query: 520 FGMAKLLLKE 529
FG + KE
Sbjct: 185 FGFCAQVSKE 194
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYL---ASKKCIHRDLAARNVLVTED 186
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 187 NVMKIADFGLAR 198
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+EY G + L + + + R + A++Y H + I+H DLK N+L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 146 LDADMNIKIADFGFS 160
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L + LD+ + ++ AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 509 LGNNMVAHLSDFGMAKLL 526
+ +N L DFG+++ +
Sbjct: 144 VSSNDCVKLGDFGLSRYM 161
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+EY G + L + + + R + A++Y H + I+H DLK N+L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 146 LDADMNIKIADFGFS 160
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 16/113 (14%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV+EY+ +L + + S+ L + +N + +++ H I+H D+K N+L
Sbjct: 88 LVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNIL 143
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRRNPQMNFFSGEMT 561
+ +N + DFG+AK L S T T T H + GT + +FS E
Sbjct: 144 IDSNKTLKIFDFGIAKAL-----SETSLTQTNH--VLGT-----VQYFSPEQA 184
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 303 LSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISII 362
L DN++ P + L + EL+LSGN L ++ G Q S++ L L S ++ +
Sbjct: 68 LELKDNQITDLAPLK--NLTKITELELSGNPLK-NVSAIAGLQ-SIKTLDLTSTQITDVT 123
Query: 363 P-STLWNLKDILYLNLSSNFFISPLP-------LEIGNLKV 395
P + L NL+ +LYL+L+ ISPL L IGN +V
Sbjct: 124 PLAGLSNLQ-VLYLDLNQITNISPLAGLTNLQYLSIGNAQV 163
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 449 LVLEYMPHGSL------EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL 502
+VLE M G L K L + L +Q L LA++YLH IIH DL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 140
Query: 503 KLSNVLLGN---NMVAHLSDFGMAKLL 526
K NVLL + + + ++DFG +K+L
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 449 LVLEYMPHGSL------EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL 502
+VLE M G L K L + L +Q L LA++YLH IIH DL
Sbjct: 90 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 139
Query: 503 KLSNVLLGN---NMVAHLSDFGMAKLL 526
K NVLL + + + ++DFG +K+L
Sbjct: 140 KPENVLLSSQEEDCLIKITDFGHSKIL 166
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 449 LVLEYMPHGSL------EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL 502
+VLE M G L K L + L +Q L LA++YLH IIH DL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 140
Query: 503 KLSNVLLGN---NMVAHLSDFGMAKLL 526
K NVLL + + + ++DFG +K+L
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
VL+Y+ G L L L+ R ++A AL YLH S I++ DLK N+L
Sbjct: 116 FVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENIL 171
Query: 509 LGNNMVAHLSDFGMAK 524
L + L+DFG+ K
Sbjct: 172 LDSQGHIVLTDFGLCK 187
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 449 LVLEYMPHGSL------EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL 502
+VLE M G L K L + L +Q L LA++YLH IIH DL
Sbjct: 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 140
Query: 503 KLSNVLLGN---NMVAHLSDFGMAKLL 526
K NVLL + + + ++DFG +K+L
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 448 KLVLEYMPHGSLEKCLYSS-NYILDIFQRLNIMIDVAL-ALEYLHFGYSTPIIHCDLKLS 505
K+ +E +P GSL L S + D Q + L L+YLH I+H D+K
Sbjct: 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGD 137
Query: 506 NVLLGN-NMVAHLSDFGMAKLL 526
NVL+ + V +SDFG +K L
Sbjct: 138 NVLINTYSGVLKISDFGTSKRL 159
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 212 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
Y P + E+ L S + + +Q VA +EYL S IH DL NVL+ +
Sbjct: 137 YNPSHNPEEQLSSKDLVSCAYQ-------VARGMEYLA---SKKCIHRDLAARNVLVTED 186
Query: 513 MVAHLSDFGMAK 524
V ++DFG+A+
Sbjct: 187 NVMKIADFGLAR 198
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 155 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 158 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 19/87 (21%)
Query: 449 LVLEYMPHGSL------EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL 502
+VLE M G L K L + L +Q L LA++YLH IIH DL
Sbjct: 97 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQML-------LAVQYLH---ENGIIHRDL 146
Query: 503 KLSNVLLGN---NMVAHLSDFGMAKLL 526
K NVLL + + + ++DFG +K+L
Sbjct: 147 KPENVLLSSQEEDCLIKITDFGHSKIL 173
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYE------RAFKSFDVACDMMKK-------------- 448
+G +YKA+ G VA+K L E A + + ++
Sbjct: 34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC 93
Query: 449 --LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
LV E+M L+K L + L Q I I + L + + I+H DLK N
Sbjct: 94 LTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN 149
Query: 507 VLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
+L+ ++ L+DFG+A+ +S+T T +R
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541
VA +E+L F +H DL NVL+ + V + DFG+A+ ++ D ++ N
Sbjct: 181 VAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS-DSNYVVRGNA-- 234
Query: 542 HRIYGTRRNPQMNFFSGEMTLKS 564
R+ P+ + F G T+KS
Sbjct: 235 -RLPVKWMAPE-SLFEGIYTIKS 255
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYE------RAFKSFDVACDMMKK-------------- 448
+G +YKA+ G VA+K L E A + + ++
Sbjct: 34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC 93
Query: 449 --LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
LV E+M L+K L + L Q I I + L + + I+H DLK N
Sbjct: 94 LTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN 149
Query: 507 VLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
+L+ ++ L+DFG+A+ +S+T T +R
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 166 LARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+Y+H S IIH DLK SNV + + + DFG+A+ + D+ T T +R
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYR 195
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+A +EYL S IH DL NVL+ N V ++DFG+A+
Sbjct: 153 LARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 409 FGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMKKLV---------------LE 452
FG +++ Q G + AVK L+ RA + A ++V +E
Sbjct: 106 FGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFME 165
Query: 453 YMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN 512
+ GSL + L L + L + LEYLH S I+H D+K NVLL ++
Sbjct: 166 LLEGGSLGQ-LVKEQGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSD 221
Query: 513 MV-AHLSDFGMAKLL 526
A L DFG A L
Sbjct: 222 GSHAALCDFGHAVCL 236
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 131 EFVPYKEAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 185
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 186 KNVVKICDFGLARDIYKD 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTR 548
LH + ++H DL N+LL +N + DF +A +ED + T+ HR Y
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA----REDTADANKTHYVTHRWY--- 199
Query: 549 RNPQM 553
R P++
Sbjct: 200 RAPEL 204
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 165 IPNLENLLLWGNNFSGAIPHFIF-NASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYD 223
+P L L+L N+ S ++P IF N KL+ L + N+ + +TF +L+ L L
Sbjct: 122 VPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 180
Query: 224 NYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEIS---NLTNLTAIY 280
N LT +LS + SL F+ N+S +L ++ + L A +
Sbjct: 181 NRLTHV--DLSLIPSL------------------FHANVSYNLLSTLAIPIAVEELDASH 220
Query: 281 LAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPT 340
+ N + G + + L L KLQ + D L E+DLS N+L +
Sbjct: 221 NSINVVRGPVNVELTIL-KLQHNNLTDTAW-------LLNYPGLVEVDLSYNELEKIMYH 272
Query: 341 CFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGID 400
F L L + +N+L+++ N + P+P LKVL D
Sbjct: 273 PFVKMQRLERLYISNNRLVAL------------------NLYGQPIP----TLKVL---D 307
Query: 401 LSMNNF 406
LS N+
Sbjct: 308 LSHNHL 313
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
VA +EYL S IH DL NVL+ + V ++DFG+A+
Sbjct: 159 VARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+Y+H S IIH DLK SNV + + + DFG+A+ + D+ T T +R
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEMTGYVATRWYR 195
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+Y+H S IIH DLK SNV + + + DFG+A+ + D+ T T +R
Sbjct: 135 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEMTGYVATRWYR 187
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LE++ G L + + +Y + + +N M L+++H I+H D+K N++
Sbjct: 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIM 181
Query: 509 LGNNMVAHLS--DFGMAKLL 526
+ + DFG+A L
Sbjct: 182 CETKKASSVKIIDFGLATKL 201
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 489 LHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTR 548
LH + ++H DL N+LL +N + DF +A +ED + T+ HR Y
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA----REDTADANKTHYVTHRWY--- 199
Query: 549 RNPQM 553
R P++
Sbjct: 200 RAPEL 204
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 94 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 150
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ ++ + DFGM + + + D
Sbjct: 151 RDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 303 LSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISII 362
L DN++ P + L + EL+LSGN L ++ G Q S++ L L S ++ +
Sbjct: 74 LELKDNQITDLTPLK--NLTKITELELSGNPLK-NVSAIAGLQ-SIKTLDLTSTQITDVT 129
Query: 363 P-STLWNLKDILYLNLSSNFFISPLP-------LEIGNLKV 395
P + L NL+ +LYL+L+ ISPL L IGN +V
Sbjct: 130 PLAGLSNLQ-VLYLDLNQITNISPLAGLTNLQYLSIGNNQV 169
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY+ G L L ++ + ++++AL +LH II+ DLK N++
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIM 153
Query: 509 LGNNMVAHLSDFGMAK 524
L + L+DFG+ K
Sbjct: 154 LNHQGHVKLTDFGLCK 169
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
IH D+ NVLL N VA + DFG+A+ ++ +
Sbjct: 188 IHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ ++ + DFGM + + + D
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L+LEY+ G L L ++ + ++++AL +LH II+ DLK N++
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIM 153
Query: 509 LGNNMVAHLSDFGMAK 524
L + L+DFG+ K
Sbjct: 154 LNHQGHVKLTDFGLCK 169
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ ++ + DFGM + + + D
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
+F++ D C V+EY G L L + R ++ AL+YLH
Sbjct: 219 SFQTHDRLC-----FVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 270
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
+++ DLKL N++L + ++DFG+ K +K+
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 305
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 174
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 58/141 (41%), Gaps = 33/141 (23%)
Query: 409 FGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMKKLV---------------LE 452
FG +++ Q G + AVK L+ RA + A ++V +E
Sbjct: 87 FGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFME 146
Query: 453 YMPHGSL------EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
+ GSL + CL + + Q L LEYLH S I+H D+K N
Sbjct: 147 LLEGGSLGQLVKEQGCLPEDRALYYLGQALE-------GLEYLH---SRRILHGDVKADN 196
Query: 507 VLLGNNMV-AHLSDFGMAKLL 526
VLL ++ A L DFG A L
Sbjct: 197 VLLSSDGSHAALCDFGHAVCL 217
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 173
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 172
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
L++ L+ VA + +L S IH D+ NVLL N VA + DFG+A+ ++ +
Sbjct: 157 LELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 170
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 81/213 (38%), Gaps = 58/213 (27%)
Query: 313 PIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTL----WN 368
P P++ ++S+ +LS N++S F + L ++L N L I ++L N
Sbjct: 427 PTPFKGINVSSI---NLSNNQISKFPKELFSTGSPLSSINLXGNXLTEIPKNSLKDENEN 483
Query: 369 LKDILYL-----------NLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARI 417
K+ L LS +F + LP LVGIDLS N+FS F +
Sbjct: 484 FKNTYLLTSIDLRFNKLTKLSDDFRATTLPY-------LVGIDLSYNSFSKFPT------ 530
Query: 418 QDGMKVAVKVFDLQYERAFKSFDVACDMMKKLVLEYMPHG-----SLEKCLYSSNYI--- 469
Q +K F ++ +R D L P G SL + SN I
Sbjct: 531 QPLNSSTLKGFGIRNQR---------DAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKV 581
Query: 470 ----------LDIFQRLNIMIDVALALEYLHFG 492
LDI NI ID++ Y+ G
Sbjct: 582 NEKITPNISVLDIKDNPNISIDLSYVCPYIEAG 614
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+ L F +S ++H DLK N+L+ N L+DFG+A+
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
L++ L+ VA + +L S IH D+ NVLL N VA + DFG+A+ ++ +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
L++ L+ VA + +L S IH D+ NVLL N VA + DFG+A+ ++ +
Sbjct: 149 LELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 205
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
+F++ D C V+EY G L L + R ++ AL+YLH
Sbjct: 216 SFQTHDRLC-----FVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 267
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
+++ DLKL N++L + ++DFG+ K +K+
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ ++ + DFGM + + + D
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L L F ++ I+H DLK N+L+ + L+DFG+A++
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+IH DLK SN+L+ +N + DFG+A+++ D+S N+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARII---DESAADNSE 171
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L L F ++ I+H DLK N+L+ + L+DFG+A++
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L L F ++ I+H DLK N+L+ + L+DFG+A++
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L L F ++ I+H DLK N+L+ + L+DFG+A++
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+IH DLK SN+L+ +N + DFG+A+++ D+S N+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARII---DESAADNSE 171
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+IH DLK SN+L+ +N + DFG+A+++ D+S N+
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARII---DESAADNSE 171
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 96 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 152
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ ++ + DFGM + + + D
Sbjct: 153 RDLAARNCMVAHDFTVKIGDFGMTRDIYETD 183
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 175 KNVVKICDFGLARDIXKD 192
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F +S ++H DLK N+L+ L+DFG+A+ +++ T +R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 37/150 (24%)
Query: 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMKKLVL---------EYMPH 456
GFG ++KA+ + DG +K E+A + + ++ +Y P
Sbjct: 22 GGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81
Query: 457 GSLE-------KCLYSSNYILD-------IFQRLNIMIDVALALE----------YLHFG 492
S + KCL+ D I +R +D LALE Y+H
Sbjct: 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH-- 139
Query: 493 YSTPIIHCDLKLSNVLLGNNMVAHLSDFGM 522
S +I+ DLK SN+ L + + DFG+
Sbjct: 140 -SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L++EY G + L + + + R + A++Y H I+H DLK N+L
Sbjct: 88 LIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHRDLKAENLL 143
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 144 LDADMNIKIADFGFS 158
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 175 KNVVKICDFGLARDIXKD 192
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 175 KNVVKICDFGLARDIYKD 192
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 184 KNVVKICDFGLARDIXKD 201
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 120 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 175 KNVVKICDFGLARDIYKD 192
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 452 EYMPHGSLEKCLYSSNYILDI-FQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLG 510
E++P+ L K + +++ FQ VA +E+L S IH DL N+LL
Sbjct: 129 EFVPYKDLYKDFLTLEHLIXYSFQ-------VAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 511 NNMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 179 EKNVVKIXDFGLARDIYKD 197
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 184 KNVVKICDFGLARDIYKD 201
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
VA +E+L S IH DL N+LL V + DFG+A+ + K+
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 129 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 184 KNVVKICDFGLARDIYKD 201
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
L++EY G + L + + + R + A++Y H I+H DLK N+L
Sbjct: 91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHRDLKAENLL 146
Query: 509 LGNNMVAHLSDFGMA 523
L +M ++DFG +
Sbjct: 147 LDADMNIKIADFGFS 161
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
E++P+ + LY L + + VA +E+L S IH DL N+LL
Sbjct: 166 EFVPYKVAPEDLYKD--FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 220
Query: 512 NMVAHLSDFGMAKLLLKE 529
V + DFG+A+ + K+
Sbjct: 221 KNVVKICDFGLARDIYKD 238
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
VA +E+L S IH DL N+LL V + DFG+A+ + K+
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
VA +E+L S IH DL N+LL V + DFG+A+ + K+
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
VA +E+L S IH DL N+LL V + DFG+A+ + K+
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 165 IPNLENLLLWGNNFSGAIPHFIF-NASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYD 223
+P L L+L N+ S ++P IF N KL+ L + N+ + +TF +L+ L L
Sbjct: 116 VPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSS 174
Query: 224 NYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEIS---NLTNLTAIY 280
N LT +LS + SL F+ N+S +L ++ + L A +
Sbjct: 175 NRLTHV--DLSLIPSL------------------FHANVSYNLLSTLAIPIAVEELDASH 214
Query: 281 LAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPT 340
+ N + G + + L L KLQ + D P L E+DLS N+L +
Sbjct: 215 NSINVVRGPVNVELTIL-KLQHNNLTDTAWLLNYP-------GLVEVDLSYNELEKIMYH 266
Query: 341 CFGNQTSLRILSLDSNKLISI 361
F L L + +N+L+++
Sbjct: 267 PFVKMQRLERLYISNNRLVAL 287
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV +YM L + ++ IL+ + ++ + ++YLH G ++H D+K SN+L
Sbjct: 88 LVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNIL 141
Query: 509 LGNNMVAHLSDFGMAK 524
L ++DFG+++
Sbjct: 142 LNAECHVKVADFGLSR 157
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
++A+ L +L S II+ DLKL NV+L + ++DFGM K
Sbjct: 129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 484 LALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+ +++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
VA +E+L S IH DL N+LL V + DFG+A+ + K+
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
VA +E+L S IH DL N+LL V + DFG+A+ + K+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
V+EY+ G L +Y + + + +A+ L F S II+ DLKL NV+
Sbjct: 419 FVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIG-LFFLQSKGIIYRDLKLDNVM 474
Query: 509 LGNNMVAHLSDFGMAK 524
L + ++DFGM K
Sbjct: 475 LDSEGHIKIADFGMCK 490
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 484 LALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+ +++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 449 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
L +EY G L K L + + L ++ D++ AL YLH IIH DLK N
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPEN 152
Query: 507 VLLG---NNMVAHLSDFGMAKLL 526
++L ++ + D G AK L
Sbjct: 153 IVLQPGPQRLIHKIIDLGYAKEL 175
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 449 LVLEYMPHGSLEKCL--YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSN 506
L +EY G L K L + + L ++ D++ AL YLH IIH DLK N
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPEN 151
Query: 507 VLLG---NNMVAHLSDFGMAKLL 526
++L ++ + D G AK L
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKEL 174
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ 535
++++ +A +EYL S ++H DL NVL+ + + +SD G+ + + D
Sbjct: 131 VHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 536 NTNTCHHR-------IYGTRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDK 588
+ R +YG + G + + + L P DV + +
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 247
Query: 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625
C ++V+ L +EC E P +R K+ +RL
Sbjct: 248 VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
+F++ D C V+EY G L L + R ++ AL+YLH
Sbjct: 76 SFQTHDRLC-----FVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 127
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
+++ DLKL N++L + ++DFG+ K +K+
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 162
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 484 LALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+ +++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 482 VALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
VA +E+L S IH DL N+LL V + DFG+A+ + K+
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
+F++ D C V+EY G L L + R ++ AL+YLH
Sbjct: 77 SFQTHDRLC-----FVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 128
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
+++ DLKL N++L + ++DFG+ K +K+
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 163
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 435 AFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYS 494
+F++ D C V+EY G L L + R ++ AL+YLH
Sbjct: 78 SFQTHDRLC-----FVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 129
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529
+++ DLKL N++L + ++DFG+ K +K+
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 164
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L + LD+ + ++ AL YL S +H D+ NVL
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
+ L DFG+++ + ED ++ + +
Sbjct: 144 VSATDCVKLGDFGLSRYM--EDSTYYKASK 171
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.0 bits (71), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
++++ L +LH II+ DLKL NV+L + ++DFGM K
Sbjct: 128 EISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N+L
Sbjct: 154 SLANNQL 160
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 CHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNM 99
C T + D + TL++S L S +P L +L LD+SFN + ++ +
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137
L +Y N L P L +LE L L NN LT
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511
EY + +L ++S N + + + AL Y+H S IIH +LK N+ +
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRNLKPXNIFIDE 151
Query: 512 NMVAHLSDFGMAK 524
+ + DFG+AK
Sbjct: 152 SRNVKIGDFGLAK 164
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 33/147 (22%)
Query: 409 FGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMKK------------------- 448
+G +YK R ++ G A+KV D+ + + +M+KK
Sbjct: 37 YGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95
Query: 449 --------LVLEYMPHGSLEKCLYSSNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIH 499
LV+E+ GS+ + ++ L I ++ L +LH +IH
Sbjct: 96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIH 152
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLL 526
D+K NVLL N L DFG++ L
Sbjct: 153 RDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N+L
Sbjct: 154 SLANNQL 160
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 CHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNM 99
C T + D + TL++S L S +P L +L LD+SFN + ++ +
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137
L +Y N L P L +LE L L NN LT
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 41/165 (24%)
Query: 395 VLVGIDLSMNNFS--------GFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDM 445
V + I L+MN+FS GFG +Y R D G A+K D + + + +A +
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN- 238
Query: 446 MKKLVLEYMPHGSLE--KCLYSS-------NYILD---------------IFQRLNIMI- 480
++++L + G C+ + ++ILD +F ++
Sbjct: 239 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 481 --DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++ L LE++H + +++ DLK +N+LL + +SD G+A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 41/165 (24%)
Query: 395 VLVGIDLSMNNFS--------GFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDM 445
V + I L+MN+FS GFG +Y R D G A+K D + + + +A +
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN- 238
Query: 446 MKKLVLEYMPHGSLE--KCLYSS-------NYILD---------------IFQRLNIMI- 480
++++L + G C+ + ++ILD +F ++
Sbjct: 239 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 481 --DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++ L LE++H + +++ DLK +N+LL + +SD G+A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N+L
Sbjct: 154 SLANNQL 160
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 CHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNM 99
C T + D + TL++S L S +P L +L LD+SFN + ++ +
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137
L +Y N L P L +LE L L NN LT
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 438 SFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVALALEYLHFGYS 494
+F+ D+ LV+ M G + +Y+ + FQ + + LE+LH
Sbjct: 253 AFETKTDLC--LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---Q 307
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
II+ DLK NVLL ++ +SD G+A + LK Q+ T+
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKG 348
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAK 524
DL N ++ ++ + DFGM +
Sbjct: 154 RDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N+L
Sbjct: 154 SLANNQL 160
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 CHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNM 99
C T + D + TL++S L S +P L +L LD+SFN + ++ +
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137
L +Y N L P L +LE L L NN LT
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT 161
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 449 LVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
LV + M G L EK S I + L ++V AL L+ I+H DLK
Sbjct: 88 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHRDLK 138
Query: 504 LSNVLLGNNMVAHLSDFGMA 523
N+LL ++M L+DFG +
Sbjct: 139 PENILLDDDMNIKLTDFGFS 158
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 41/165 (24%)
Query: 395 VLVGIDLSMNNFS--------GFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDM 445
V + I L+MN+FS GFG +Y R D G A+K D + + + +A +
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN- 238
Query: 446 MKKLVLEYMPHGSLE--KCLYSS-------NYILD---------------IFQRLNIMI- 480
++++L + G C+ + ++ILD +F ++
Sbjct: 239 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 481 --DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++ L LE++H + +++ DLK +N+LL + +SD G+A
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 438 SFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVALALEYLHFGYS 494
+F+ D+ LV+ M G + +Y+ + FQ + + LE+LH
Sbjct: 253 AFETKTDLC--LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---Q 307
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
II+ DLK NVLL ++ +SD G+A + LK Q+ T+
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKG 348
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 41/165 (24%)
Query: 395 VLVGIDLSMNNFS--------GFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDM 445
V + I L+MN+FS GFG +Y R D G A+K D + + + +A +
Sbjct: 179 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN- 237
Query: 446 MKKLVLEYMPHGSLE--KCLYSS-------NYILD---------------IFQRLNIMI- 480
++++L + G C+ + ++ILD +F ++
Sbjct: 238 -ERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 296
Query: 481 --DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523
++ L LE++H + +++ DLK +N+LL + +SD G+A
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 438 SFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVALALEYLHFGYS 494
+F+ D+ LV+ M G + +Y+ + FQ + + LE+LH
Sbjct: 253 AFETKTDLC--LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---Q 307
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
II+ DLK NVLL ++ +SD G+A + LK Q+ T+
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKG 348
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
A+EY H I+H DLK N+LL ++ ++DFG++ ++
Sbjct: 124 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
A+EY H I+H DLK N+LL ++ ++DFG++ ++
Sbjct: 125 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 163
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
A+EY H I+H DLK N+LL ++ ++DFG++ ++
Sbjct: 115 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 153
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+++E G L L + LD+ + ++ AL YL S +H D+ NVL
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 509 LGNNMVAHLSDFGMAKLLLKEDQSF 533
+ L DFG+++ + ED ++
Sbjct: 524 VSATDCVKLGDFGLSRYM--EDSTY 546
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 30/239 (12%)
Query: 165 IPNLENLLLWGNNFSGAI--PHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLY 222
+ NLE L L N GA+ +F + L +L L+ N+ + P +F +N++R ++
Sbjct: 102 LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF--FLNMRRFHVL 159
Query: 223 D---NYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNL---TNL 276
D N + S E + + L SS +L+ + + E+ N T++
Sbjct: 160 DLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG-----WEKCGNPFKNTSI 214
Query: 277 TAIYLAGNKLNGSIP------ITLCKLQKLQLL-------SFVDNKLEGPIPYEFCRL-- 321
T + L+GN S+ I K+Q L L SF + P + F L
Sbjct: 215 TTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEA 274
Query: 322 ASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSN 380
+ + DLS +K+ + + F + T L L+L N++ I + W L + L L +N
Sbjct: 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALDTN 333
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ 535
++++ +A +EYL S ++H DL NVL+ + + +SD G+ + + D
Sbjct: 148 VHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 536 NTNTCHHR-------IYGTRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDK 588
+ R +YG + G + + + L P DV + +
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ 264
Query: 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625
C ++V+ L +EC E P +R K+ +RL
Sbjct: 265 VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
A+EY H I+H DLK N+LL ++ ++DFG++ ++
Sbjct: 119 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 157
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 449 LVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
LV + M G L EK S I + L ++V AL L+ I+H DLK
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHRDLK 151
Query: 504 LSNVLLGNNMVAHLSDFGMA 523
N+LL ++M L+DFG +
Sbjct: 152 PENILLDDDMNIKLTDFGFS 171
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 449 LVLEYMPHGSL-----EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLK 503
LV + M G L EK S I + L ++V AL L+ I+H DLK
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHRDLK 151
Query: 504 LSNVLLGNNMVAHLSDFGMA 523
N+LL ++M L+DFG +
Sbjct: 152 PENILLDDDMNIKLTDFGFS 171
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 491 FGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS 532
F + + IIH DLK +N LL + + DFG+A+ + E +
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 438 SFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI---DVALALEYLHFGYS 494
+F+ D+ LV+ M G + +Y+ + FQ + + LE+LH
Sbjct: 253 AFETKTDLC--LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---Q 307
Query: 495 TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536
II+ DLK NVLL ++ +SD G+A + LK Q+ T+
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKG 348
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 425 VKVFDLQYERAFKSFDVACDMMKKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAL 484
VKV D+ + + FD +VLE + +K + Y+ ++ + ++ ++ +
Sbjct: 115 VKVLDIVIPKDVEKFDELY-----VVLE-IADSDFKKLFRTPVYLTELHIK-TLLYNLLV 167
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
++Y+H S I+H DLK +N L+ + + DFG+A+ +
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 491 FGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
F + + IIH DLK +N LL + + DFG+A+ +
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 CHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNM 99
C T + D + TL++S L S +P L +L LD+SFN + ++ +
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137
L +Y N L P L +LE L L NN LT
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLT 161
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N L
Sbjct: 154 SLANNDL 160
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E++ G+L + + ++ Q + + V AL LH + +IH D+K ++L
Sbjct: 225 VVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSIL 279
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
L ++ LSDFG + KE
Sbjct: 280 LTHDGRVKLSDFGFCAQVSKE 300
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 265 GILEEISNLTN-LTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLAS 323
G+ E +NL +T I L N + P +KL+ + +N++ P F L S
Sbjct: 22 GLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 81
Query: 324 LYELDLSGNKLSGSIPT-------------------------CFGNQTSLRILSLDSNKL 358
L L L GNK++ +P F + +L +LSL NKL
Sbjct: 82 LNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINXLRVDAFQDLHNLNLLSLYDNKL 140
Query: 359 ISIIPSTLWNLKDILYLNLSSNFFI 383
+I T L+ I ++L+ N FI
Sbjct: 141 QTIAKGTFSPLRAIQTMHLAQNPFI 165
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N L
Sbjct: 154 SLANNNL 160
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 75 LSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNN 134
L +L LD+SFN + ++ + L +Y N L P L +LE L L NN
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 135 FLT 137
LT
Sbjct: 159 NLT 161
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLL-GNNMVAHLSDFGMAKLLLKED 530
ALE L + ++ I+H D+K NVLL + A L DFG A L L+ D
Sbjct: 159 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPD 204
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLL-GNNMVAHLSDFGMAKLLLKED 530
ALE L + ++ I+H D+K NVLL + A L DFG A L L+ D
Sbjct: 173 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPD 218
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 CHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNM 99
C T + D + TL++S L S +P L +L LD+SFN + ++ +
Sbjct: 65 CELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 123
Query: 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137
L +Y N L P L +LE L L NN LT
Sbjct: 124 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N L
Sbjct: 154 SLANNNL 160
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 CHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNM 99
C T + D + TL++S L S +P L +L LD+SFN + ++ +
Sbjct: 66 CELTKLQVDGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGL 124
Query: 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137
L +Y N L P L +LE L L NN LT
Sbjct: 125 GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 162
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 35 TILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLP 94
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 95 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 154
Query: 304 SFVDNKL 310
S +N L
Sbjct: 155 SLANNNL 161
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLL-GNNMVAHLSDFGMAKLLLKED 530
ALE L + ++ I+H D+K NVLL + A L DFG A L L+ D
Sbjct: 175 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPD 220
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 281 LAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPT 340
L+ N L GS+ C K+++L +N++ IP + L +L EL+++ N+L
Sbjct: 435 LSSNMLTGSV--FRCLPPKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDG 491
Query: 341 CFGNQTSLRILSLDSN 356
F TSL+ + L N
Sbjct: 492 VFDRLTSLQYIWLHDN 507
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLL--GNNMVAHLSDFGMAKLLLKED--QSFTQNTNTCH 541
LEY+H +H D+K SN+LL N +L D+G+A E + + ++ CH
Sbjct: 165 LEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCH 221
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N L
Sbjct: 154 SLANNNL 160
Score = 28.9 bits (63), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 75 LSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNN 134
L +L LD+SFN + ++ + L +Y N L P L +LE L L NN
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 135 FLT 137
LT
Sbjct: 159 NLT 161
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLL--GNNMVAHLSDFGMAKLLLKED--QSFTQNTNTCH 541
LEY+H +H D+K SN+LL N +L D+G+A E + + ++ CH
Sbjct: 165 LEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCH 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
LE +H + I+H DLK +N L+ + M+ L DFG+A + + S +++
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV 169
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 265 GILEEISNLTN-LTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLAS 323
G+ E +NL +T I L N + P +KL+ + +N++ P F L S
Sbjct: 22 GLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 81
Query: 324 LYELDLSGNKLSGSIPT-------------------------CFGNQTSLRILSLDSNKL 358
L L L GNK++ +P F + +L +LSL NKL
Sbjct: 82 LNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140
Query: 359 ISIIPSTLWNLKDILYLNLSSNFFI 383
+I T L+ I ++L+ N FI
Sbjct: 141 QTIAKGTFSPLRAIQTMHLAQNPFI 165
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
LE +H + I+H DLK +N L+ + M+ L DFG+A + + S +++
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV 173
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDF 520
KC + SN + F + + L+Y+H S ++H DLK SN+LL + DF
Sbjct: 121 KCQHLSNDHICYF-----LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDF 172
Query: 521 GMAKL 525
G+A++
Sbjct: 173 GLARV 177
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRI 544
L+Y+H S IIH DLK SN+ + + + DFG+A+ D T T R
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVAT---RW 216
Query: 545 YGTRRNPQ--MNFFSGEMTLKSW 565
Y R P+ +N+ MT+ W
Sbjct: 217 Y---RAPEIMLNWMHYNMTVDIW 236
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
LE +H + I+H DLK +N L+ + M+ L DFG+A + + S +++
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQ 216
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
LE +H + I+H DLK +N L+ + M+ L DFG+A + + S +++
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV 189
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Query: 193 SILELQKN-----SFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFL----YSLSNCK 243
+IL L +N S L+P T +NL R L + + P L L L +
Sbjct: 34 TILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLP 93
Query: 244 YLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLL 303
L Q+ +L V + ++ L + L L +YL GN+L P L KL+ L
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153
Query: 304 SFVDNKL 310
S +N L
Sbjct: 154 SLANNNL 160
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 75 LSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNN 134
L +L LD+SFN + ++ + L +Y N L P L +LE L L NN
Sbjct: 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158
Query: 135 FLT 137
LT
Sbjct: 159 NLT 161
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 193
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
+++LH S IIH DLK SN+++ ++ + DFG+A+
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E++ G+L + + ++ Q + + V AL LH + +IH D+K ++L
Sbjct: 105 VVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSIL 159
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
L ++ LSDFG + KE
Sbjct: 160 LTHDGRVKLSDFGFCAQVSKE 180
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E++ G+L + + ++ Q + + V AL LH + +IH D+K ++L
Sbjct: 148 VVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSIL 202
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
L ++ LSDFG + KE
Sbjct: 203 LTHDGRVKLSDFGFCAQVSKE 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
LE +H + I+H DLK +N L+ + M+ L DFG+A + + S +++
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQ 169
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E++ G+L + + ++ Q + + V AL LH + +IH D+K ++L
Sbjct: 103 VVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSIL 157
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
L ++ LSDFG + KE
Sbjct: 158 LTHDGRVKLSDFGFCAQVSKE 178
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
L+ L F + I+H DLK N+L+ L DFG+A+ +F+ T +R
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
LE +H + I+H DLK +N L+ + M+ L DFG+A + + S +++
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQ 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
LE +H + I+H DLK +N L+ + M+ L DFG+A + + S +++
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQ 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 449 LVLEYMPHGSLEKC-----LYSSNYILDI-FQRLNIMIDVAL-ALEYLHFGYSTPIIHCD 501
++ EYM + S+ K + NY I Q + +I L + Y+H I H D
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRD 177
Query: 502 LKLSNVLLGNNMVAHLSDFGMAKLLL 527
+K SN+L+ N LSDFG ++ ++
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMV 203
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 193
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E++ G+L + + ++ Q + + V AL LH + +IH D+K ++L
Sbjct: 94 VVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSIL 148
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
L ++ LSDFG + KE
Sbjct: 149 LTHDGRVKLSDFGFCAQVSKE 169
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLG---NNMVAHLSDFGMA 523
LE L + + IIH D+K NVLL N+ L DFG+A
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+ L F +S ++H DLK N+L+ N L++FG+A+
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 35/169 (20%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERA-FKSFDV---------------ACDMMKK---- 448
+G ++ + + G KVAVKVF E + F+ ++ A D+
Sbjct: 50 YGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108
Query: 449 ---LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFG-YST----PIIHC 500
L+ +Y +GSL L S+ LD L + L +LH +ST I H
Sbjct: 109 QLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 501 DLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
DLK N+L+ N ++D G+A + + NT R+ GT+R
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT---RV-GTKR 211
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 486 LEYLHFGYSTPIIHCDLKLSNVLLG--NNMVAHLSDFGMAKLLLKED--QSFTQNTNTCH 541
LEY+H +H D+K SN+LL N +L D+G+A E +++ + CH
Sbjct: 165 LEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCH 221
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+V+E++ G+L + + ++ Q + + V AL LH + +IH D+K ++L
Sbjct: 98 VVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSIL 152
Query: 509 LGNNMVAHLSDFGMAKLLLKE 529
L ++ LSDFG + KE
Sbjct: 153 LTHDGRVKLSDFGFCAQVSKE 173
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 98 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 154
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
+L N ++ ++ + DFGM + + + D
Sbjct: 155 RNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+LL + DFG+A++
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILD---------IFQRLNIMIDVALALEYLHFGYSTPIIH 499
+V+E M HG L+ L S + + + + + ++A + YL+ + +H
Sbjct: 97 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVH 153
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
+L N ++ ++ + DFGM + + + D
Sbjct: 154 RNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525
L+Y+H S ++H DLK SN+L+ + DFG+A++
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 470 LDIFQRL----NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN--MVAHLSDFGMA 523
LD QR NIM + AL YLH + I H D+K N L N L DFG++
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Query: 524 KLLLK 528
K K
Sbjct: 218 KEFYK 222
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 16/79 (20%)
Query: 473 FQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL-------------GNNMVAHLSD 519
+ ++++ +A + +LH S IIH DLK N+L+ N+ +SD
Sbjct: 115 YNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 520 FGMAKLLLKEDQSFTQNTN 538
FG+ K L SF N N
Sbjct: 172 FGLCKKLDSGQSSFRTNLN 190
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%)
Query: 296 KLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDS 355
KL +L+ ++F +NK+ F + + E+ L+ N+L F SL+ L L S
Sbjct: 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114
Query: 356 NKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFS 407
N++ + + L + L+L N + P L L ++L N F+
Sbjct: 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 136 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 8/47 (17%)
Query: 479 MIDVALALEYLHFGYSTPIIHCDLKLSNVLLG--NNMVAHLSDFGMA 523
M+DV LEY+H +H D+K +N+LLG N +L+D+G++
Sbjct: 160 MLDV---LEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLS 200
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 147 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 135 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
++H DL N+L+ +SDFG+++ + +ED ++
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN 538
++H DL N+L+ +SDFG+++ + +ED ++
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 93 PSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFL 136
PS I S L + F+NN L + E G+L ELETL LQ N L
Sbjct: 320 PSKI---SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 281 LAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIP 339
L NK+ SIP + KL+ LQ L+ N+L+ F RL SL ++ L N S P
Sbjct: 428 LHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 280 YLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIP 339
+L NG I + QK +L+ N + + L+ L L +S N++
Sbjct: 3 FLVDRSKNGLIHVPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDI 62
Query: 340 TCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFIS-PLPLEIGNLKVLVG 398
+ F L L L NKL+ I NLK +L+LS N F + P+ E GN+ L
Sbjct: 63 SVFKFNQELEYLDLSHNKLVKISCHPTVNLK---HLDLSFNAFDALPICKEFGNMSQLKF 119
Query: 399 IDLS 402
+ LS
Sbjct: 120 LGLS 123
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 497 IIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
++H DL N+L+ +SDFG+++ + +ED
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 499 HCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
H D+K N+L+ + A+L DFG+A D+ TQ NT
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNT 195
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
IH DL N+LL + + + DFG+A+ +K D ++ N
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLAR-HIKNDSNYVVKGNA 230
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + DFG+A+
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV EY G + L + + R + A++Y H + I+H DLK N+L
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 509 LGNNMVAHLSDFGMA 523
L + ++DFG +
Sbjct: 146 LDADXNIKIADFGFS 160
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLG-----NNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
L +LH S I+H DLK N+L+ + A +SDFG+ K L SF++ +
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526
LEYLH S I+H D+K N+LL +S G+A+ L
Sbjct: 121 GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKKL-VLEYMPHGSLEK---CLY 464
+G +YKA+ G A+K L+ E + ++++ +L+ + H ++ K ++
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDE----GIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 465 SSNYILDIF----QRLNIMIDVALA--------------LEYLHFGYSTPIIHCDLKLSN 506
+ ++ +F Q L ++DV L + + + ++H DLK N
Sbjct: 71 TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 507 VLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
+L+ ++DFG+A+ + +T T +R
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR 167
>pdb|3TSR|E Chain E, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
With Mouse Ribonuclease 1
pdb|3TSR|F Chain F, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
With Mouse Ribonuclease 1
pdb|3TSR|G Chain G, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
With Mouse Ribonuclease 1
pdb|3TSR|H Chain H, X-Ray Structure Of Mouse Ribonuclease Inhibitor Complexed
With Mouse Ribonuclease 1
Length = 457
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 27/189 (14%)
Query: 175 GNNFSGAIPHFIFNAS-KLSILELQKNSFFD----LIPNTFGNLINLKRLNLYDNYLTSS 229
G+ G + + N + K+ L LQ + ++P +L L+ L+L DN + +
Sbjct: 65 GDGGVGLVLQGLQNPTCKIQKLSLQNCGLTEAGCGILPGMLRSLSTLRELHLNDNPMGDA 124
Query: 230 TPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTA----IYLAGNK 285
L L C+ L+ LE + CN++ E ++++ + A + L+ N
Sbjct: 125 G--LKLL-----CEGLQDPQCRLEKLQLEYCNLTATSCEPLASVLRVKADFKELVLSNND 177
Query: 286 LNGSIPITLCKLQKLQLLSFVDNKLEG-PIPYEFCR--------LASLYELDLSGNKL-- 334
L+ LC+ K KLE I C+ ASL ELDLS NKL
Sbjct: 178 LHEPGVRILCQGLKDSACQLESLKLENCGITAANCKDLCDVVASKASLQELDLSSNKLGN 237
Query: 335 SGSIPTCFG 343
+G C G
Sbjct: 238 AGIAALCPG 246
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
LV E M GS+ ++ + ++ + ++ DVA AL++LH + I H DLK N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAHRDLKPENIL 143
Query: 509 LGN-NMVA--HLSDFGMA 523
+ N V+ + DFG+
Sbjct: 144 CEHPNQVSPVKICDFGLG 161
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKKL-VLEYMPHGSLEK---CLY 464
+G +YKA+ G A+K L+ E + ++++ +L+ + H ++ K ++
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDE----GIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 465 SSNYILDIF----QRLNIMIDVALA--------------LEYLHFGYSTPIIHCDLKLSN 506
+ ++ +F Q L ++DV L + + + ++H DLK N
Sbjct: 71 TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 507 VLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
+L+ ++DFG+A+ + +T T +R
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYR 167
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 155
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 156 RDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
+VLEY P G L + S + + + R+ + + A+ Y+H S H DLK N+L
Sbjct: 85 MVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRDLKPENLL 140
Query: 509 LGNNMVAHLSDFGMA 523
L DFG+
Sbjct: 141 FDEYHKLKLIDFGLC 155
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 26/157 (16%)
Query: 409 FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKKL-VLEYMPHGSLEK---CLY 464
+G +YKA+ G A+K L+ E + ++++ +L+ + H ++ K ++
Sbjct: 15 YGVVYKAQNNYGETFALKKIRLEKEDE----GIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 465 SSNYILDIF----QRLNIMIDVALA--------------LEYLHFGYSTPIIHCDLKLSN 506
+ ++ +F Q L ++DV L + + + ++H DLK N
Sbjct: 71 TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 507 VLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHR 543
+L+ ++DFG+A+ + +T T +R
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYR 167
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
IH DL N+LL + + + DFG+A+ +K D ++ N
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNA 230
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 99 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 155
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 156 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 90 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 146
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 147 RDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 92 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 148
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 149 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
IH DL N+LL + + + DFG+A+ +K D ++ N
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNA 223
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 96 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 152
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 153 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 273 LTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGN 332
LT LT + L+ N++ KL KL +L +NKL+ F +L L EL L N
Sbjct: 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTN 110
Query: 333 KLSGSIPTCFGNQTSLRILSLDSN 356
+L F TSL+ + L +N
Sbjct: 111 QLKSVPDGIFDRLTSLQKIWLHTN 134
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
IH DL N+LL + + + DFG+A+ +K D ++ N
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNA 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 498 IHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539
IH DL N+LL + + + DFG+A+ +K D ++ N
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNYVVKGNA 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 490 HFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRIYGTRR 549
H + IIH D+K SN+LL + L DFG++ L+ D C + R
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAPERI 197
Query: 550 NP 551
+P
Sbjct: 198 DP 199
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 485 ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524
L+Y+H S IIH DLK SN+ + + + D+G+A+
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
EY GSL + + I+ F+ ++++ V L Y+H S ++H D+K SN+
Sbjct: 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIF 147
Query: 509 LGNNMV 514
+ +
Sbjct: 148 ISRTSI 153
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 95 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 151
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 152 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 154
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 155 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
EY GSL + + I+ F+ ++++ V L Y+H S ++H D+K SN+
Sbjct: 87 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIF 143
Query: 509 LGNNMV 514
+ +
Sbjct: 144 ISRTSI 149
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 98 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 154
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 155 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 161
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL-------------GNNMVAHLSDFGM 522
++++ +A + +LH S IIH DLK N+L+ N+ +SDFG+
Sbjct: 136 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 523 AKLLLKEDQSFTQNTN 538
K L F N N
Sbjct: 193 CKKLDSGQXXFRXNLN 208
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
EY GSL + + I+ F+ ++++ V L Y+H S ++H D+K SN+
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIF 145
Query: 509 LGNNMV 514
+ +
Sbjct: 146 ISRTSI 151
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 183
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 184 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 449 LVLEYMPHGSLEKCLYS------SNYIL---DIFQRLNIMIDVALALEYLHFGYSTPIIH 499
+++E M G L+ L S +N +L + + + + ++A + YL+ + +H
Sbjct: 105 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVH 161
Query: 500 CDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530
DL N ++ + + DFGM + + + D
Sbjct: 162 RDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 452 EYMPHGSLEKCLYSSNYILDIFQRL---NIMIDVALALEYLHFGYSTPIIHCDLKLSNVL 508
EY GSL + + I+ F+ ++++ V L Y+H S ++H D+K SN+
Sbjct: 89 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIF 145
Query: 509 LGNNMV 514
+ +
Sbjct: 146 ISRTSI 151
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL-------------GNNMVAHLSDFGM 522
++++ +A + +LH S IIH DLK N+L+ N+ +SDFG+
Sbjct: 136 ISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 523 AKLLLKEDQSFTQNTN 538
K L F N N
Sbjct: 193 CKKLDSGQXXFRXNLN 208
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 96/227 (42%), Gaps = 22/227 (9%)
Query: 195 LELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEV 254
+ LQK+ FF++ NTF L+ L+L +L S P S L LS K L S+ E
Sbjct: 259 INLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELP--SGLVGLSTLKKLVLSANKFEN 315
Query: 255 FSMFNCNISGGILEEISNLTNLTAIYLAGN----KLNGSIPITLCKLQKLQLLSFVDNKL 310
C IS SN +LT + + GN +L L L++L LS D +
Sbjct: 316 L----CQISA------SNFPSLTHLSIKGNTKRLELGTGCLENLENLRELD-LSHDDIET 364
Query: 311 EGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKL-ISIIPSTLWNL 369
+ L+ L L+LS N+ F L +L L +L + S NL
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424
Query: 370 KDILYLNLSSNFF-ISPLPLEIGNLKVLVGIDLSMNNFSGFGSIYKA 415
+ LNLS + IS L G L L ++L N+F G+I K
Sbjct: 425 HLLKVLNLSHSLLDISSEQLFDG-LPALQHLNLQGNHFPK-GNIQKT 469
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 195 LELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLS----NCKYLEQSSQ 250
+ LQK+ F DL +TF ++ L+L +L + + SL N +Q Q
Sbjct: 258 INLQKHRFSDLSSSTFRCFTRVQELDLTAAHLNGLPSGIEGMNSLKKLVLNANSFDQLCQ 317
Query: 251 --SLEVFSMFNCNISGGILEE------ISNLTNLTAIYLAGNKLNGS--IPITLCKLQKL 300
+ S+ + I G + + + L NL + L+ + + S + L L+ L
Sbjct: 318 INAASFPSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHL 377
Query: 301 QLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIP-TCFGNQTSLRILSLDSNKLI 359
Q L+ N+ G F L LD++ L P + F N LR+L+L L
Sbjct: 378 QYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLD 437
Query: 360 SIIPSTLWNLKDILYLNLSSNFF 382
+ L L+D+ +LNL N F
Sbjct: 438 TSNQHLLAGLQDLRHLNLQGNSF 460
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 190 SKLSILELQKNSFFDLIPN-TFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQS 248
S ++L+L N+ L T L NL L L N+L + E +F+ + N +YL+ S
Sbjct: 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE-AFV-PVPNLRYLDLS 96
Query: 249 S--------------QSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITL 294
S Q+LEV ++N +I ++ L +YL+ N++ P+ L
Sbjct: 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI-SRFPVEL 155
Query: 295 C----KLQKLQLLSFVDNKLE 311
KL KL LL NKL+
Sbjct: 156 IKDGNKLPKLMLLDLSSNKLK 176
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 16/79 (20%)
Query: 473 FQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL-------------GNNMVAHLSD 519
+ ++++ +A + +LH S IIH DLK N+L+ N+ +SD
Sbjct: 115 YNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 520 FGMAKLLLKEDQSFTQNTN 538
FG+ K L F N N
Sbjct: 172 FGLCKKLDSGQXXFRXNLN 190
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,252,932
Number of Sequences: 62578
Number of extensions: 673483
Number of successful extensions: 3684
Number of sequences better than 100.0: 961
Number of HSP's better than 100.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 2330
Number of HSP's gapped (non-prelim): 1285
length of query: 639
length of database: 14,973,337
effective HSP length: 105
effective length of query: 534
effective length of database: 8,402,647
effective search space: 4487013498
effective search space used: 4487013498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)