Query 041082
Match_columns 639
No_of_seqs 493 out of 4521
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 03:39:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041082.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041082hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-69 2.2E-74 640.3 45.1 606 8-631 28-954 (968)
2 KOG1187 Serine/threonine prote 100.0 3.1E-38 6.7E-43 325.0 16.2 219 407-629 86-353 (361)
3 PLN00113 leucine-rich repeat r 100.0 5E-37 1.1E-41 362.5 22.9 337 52-389 212-590 (968)
4 KOG4194 Membrane glycoprotein 100.0 1.1E-36 2.4E-41 307.9 5.5 342 54-408 80-430 (873)
5 KOG4194 Membrane glycoprotein 100.0 7.6E-34 1.6E-38 287.3 5.1 340 53-406 103-451 (873)
6 KOG0444 Cytoskeletal regulator 100.0 2E-32 4.4E-37 278.5 -4.9 343 53-405 8-373 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 4.2E-31 9.1E-36 256.8 -10.7 341 54-407 139-541 (565)
8 KOG0444 Cytoskeletal regulator 99.9 1E-29 2.2E-34 258.9 -3.4 328 74-408 5-353 (1255)
9 KOG0192 Tyrosine kinase specif 99.9 1.9E-26 4.2E-31 235.7 13.7 225 407-633 52-308 (362)
10 KOG0472 Leucine-rich repeat pr 99.9 1.5E-29 3.2E-34 246.0 -8.8 240 55-310 48-309 (565)
11 KOG0197 Tyrosine kinases [Sign 99.9 8.8E-26 1.9E-30 229.9 12.7 218 408-630 218-463 (468)
12 KOG0618 Serine/threonine phosp 99.9 9.3E-26 2E-30 240.7 -3.0 366 53-434 46-487 (1081)
13 KOG0618 Serine/threonine phosp 99.9 6.1E-25 1.3E-29 234.5 -3.3 342 53-405 69-487 (1081)
14 KOG0581 Mitogen-activated prot 99.9 1.3E-22 2.8E-27 197.7 13.0 198 409-623 92-334 (364)
15 PRK15387 E3 ubiquitin-protein 99.9 5.3E-22 1.1E-26 219.0 18.7 261 54-366 203-465 (788)
16 KOG0193 Serine/threonine prote 99.9 7.8E-23 1.7E-27 209.6 10.4 218 408-631 404-656 (678)
17 PRK15387 E3 ubiquitin-protein 99.9 1.1E-21 2.4E-26 216.4 18.5 265 76-392 201-467 (788)
18 PLN03210 Resistant to P. syrin 99.9 1.1E-20 2.5E-25 224.0 26.1 311 67-404 579-903 (1153)
19 KOG4237 Extracellular matrix p 99.9 9.8E-24 2.1E-28 205.5 -2.4 277 53-358 68-358 (498)
20 PLN03210 Resistant to P. syrin 99.9 2E-20 4.3E-25 222.0 24.6 315 69-409 551-885 (1153)
21 KOG1026 Nerve growth factor re 99.9 5.7E-22 1.2E-26 212.1 7.8 217 408-631 498-765 (774)
22 KOG1095 Protein tyrosine kinas 99.8 1.1E-21 2.4E-26 217.5 8.1 217 409-632 705-965 (1025)
23 PRK15370 E3 ubiquitin-protein 99.8 5.9E-20 1.3E-24 204.2 17.1 314 7-383 61-428 (754)
24 PHA02988 hypothetical protein; 99.8 1.6E-20 3.6E-25 189.9 10.5 201 407-630 31-281 (283)
25 cd05102 PTKc_VEGFR3 Catalytic 99.8 3.1E-20 6.7E-25 193.2 12.0 202 407-630 18-336 (338)
26 KOG0196 Tyrosine kinase, EPH ( 99.8 8.4E-21 1.8E-25 199.4 7.5 198 409-629 642-892 (996)
27 KOG4278 Protein tyrosine kinas 99.8 6.1E-21 1.3E-25 195.0 6.1 216 404-629 273-524 (1157)
28 PF07714 Pkinase_Tyr: Protein 99.8 1.6E-20 3.5E-25 187.5 9.1 195 408-625 11-259 (259)
29 KOG0194 Protein tyrosine kinas 99.8 4.6E-20 9.9E-25 191.4 11.5 201 408-631 169-423 (474)
30 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 7.2E-20 1.6E-24 185.5 11.7 214 407-629 15-284 (284)
31 KOG1094 Discoidin domain recep 99.8 3.9E-20 8.4E-25 188.4 9.5 217 409-628 551-804 (807)
32 KOG0661 MAPK related serine/th 99.8 2.2E-20 4.8E-25 186.6 7.5 119 407-529 21-163 (538)
33 PRK15370 E3 ubiquitin-protein 99.8 7.6E-20 1.7E-24 203.3 12.4 165 45-229 173-340 (754)
34 cd05096 PTKc_DDR1 Catalytic do 99.8 9.2E-20 2E-24 186.7 12.1 204 407-626 16-303 (304)
35 KOG3653 Transforming growth fa 99.8 5.2E-20 1.1E-24 183.8 9.7 118 407-530 221-370 (534)
36 cd05108 PTKc_EGFR Catalytic do 99.8 1E-19 2.2E-24 187.4 10.9 201 407-630 18-270 (316)
37 KOG2052 Activin A type IB rece 99.8 2.1E-19 4.5E-24 178.2 12.0 207 407-630 222-505 (513)
38 cd05104 PTKc_Kit Catalytic dom 99.8 2.7E-19 5.8E-24 188.5 13.4 200 407-628 46-374 (375)
39 cd05114 PTKc_Tec_Rlk Catalytic 99.8 1.5E-19 3.2E-24 180.2 10.4 195 407-625 15-255 (256)
40 KOG0659 Cdk activating kinase 99.8 3.3E-19 7.1E-24 165.7 11.7 199 408-624 14-281 (318)
41 cd05148 PTKc_Srm_Brk Catalytic 99.8 1.5E-19 3.2E-24 180.7 10.1 199 407-628 17-261 (261)
42 cd05038 PTKc_Jak_rpt2 Catalyti 99.8 4.6E-19 1E-23 179.4 13.8 210 407-628 15-283 (284)
43 KOG4237 Extracellular matrix p 99.8 2.4E-21 5.1E-26 189.0 -2.9 306 58-408 52-360 (498)
44 cd05115 PTKc_Zap-70 Catalytic 99.8 2.2E-19 4.8E-24 179.1 11.1 199 407-628 6-255 (257)
45 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.8 1.7E-19 3.8E-24 182.6 10.5 212 407-629 15-282 (283)
46 cd05064 PTKc_EphR_A10 Catalyti 99.8 1.7E-19 3.8E-24 180.8 9.8 199 407-628 16-265 (266)
47 KOG0600 Cdc2-related protein k 99.8 8.2E-19 1.8E-23 176.7 14.1 119 408-530 129-272 (560)
48 KOG1989 ARK protein kinase fam 99.8 4.3E-19 9.3E-24 191.1 12.9 217 407-630 48-313 (738)
49 cd05072 PTKc_Lyn Catalytic dom 99.8 2.6E-19 5.7E-24 178.9 10.5 197 407-627 17-260 (261)
50 KOG0578 p21-activated serine/t 99.8 4.9E-19 1.1E-23 181.3 12.4 192 409-623 286-522 (550)
51 cd05068 PTKc_Frk_like Catalyti 99.8 3.8E-19 8.3E-24 177.8 11.4 200 407-627 17-260 (261)
52 cd05109 PTKc_HER2 Catalytic do 99.8 5.4E-19 1.2E-23 178.6 12.2 202 407-631 18-271 (279)
53 cd05054 PTKc_VEGFR Catalytic d 99.8 7.6E-19 1.6E-23 182.3 13.6 202 407-630 18-335 (337)
54 cd05106 PTKc_CSF-1R Catalytic 99.8 6.6E-19 1.4E-23 185.3 13.2 200 407-628 49-372 (374)
55 KOG0198 MEKK and related serin 99.8 1.1E-18 2.5E-23 173.2 14.0 199 407-626 28-278 (313)
56 KOG0591 NIMA (never in mitosis 99.8 3.4E-19 7.3E-24 166.7 9.5 218 407-627 30-284 (375)
57 cd05111 PTK_HER3 Pseudokinase 99.8 4.6E-19 9.9E-24 179.1 11.0 201 407-630 18-270 (279)
58 cd05075 PTKc_Axl Catalytic dom 99.8 3.6E-19 7.8E-24 179.1 9.5 199 407-628 10-271 (272)
59 cd05052 PTKc_Abl Catalytic dom 99.8 5.7E-19 1.2E-23 176.7 10.8 198 407-628 17-262 (263)
60 cd05082 PTKc_Csk Catalytic dom 99.8 6.6E-19 1.4E-23 175.5 10.6 196 407-628 17-256 (256)
61 cd05093 PTKc_TrkB Catalytic do 99.8 5.2E-19 1.1E-23 179.6 10.0 208 407-631 16-282 (288)
62 cd05063 PTKc_EphR_A2 Catalytic 99.8 7.5E-19 1.6E-23 176.4 10.9 199 407-628 16-267 (268)
63 cd05033 PTKc_EphR Catalytic do 99.8 8.2E-19 1.8E-23 175.9 11.0 199 407-628 15-265 (266)
64 cd05094 PTKc_TrkC Catalytic do 99.8 8.6E-19 1.9E-23 178.3 11.3 202 407-631 16-285 (291)
65 cd05059 PTKc_Tec_like Catalyti 99.8 4.3E-19 9.4E-24 176.9 8.8 195 407-625 15-255 (256)
66 cd08224 STKc_Nek6_Nek7 Catalyt 99.8 3.3E-18 7.1E-23 171.5 15.2 202 407-629 13-266 (267)
67 cd05113 PTKc_Btk_Bmx Catalytic 99.8 6.8E-19 1.5E-23 175.5 9.7 202 407-626 15-256 (256)
68 cd05085 PTKc_Fer Catalytic dom 99.8 8.5E-19 1.8E-23 174.0 10.3 197 407-626 6-249 (250)
69 cd05116 PTKc_Syk Catalytic dom 99.8 8E-19 1.7E-23 175.0 10.1 198 407-628 6-255 (257)
70 KOG0615 Serine/threonine prote 99.8 1.1E-18 2.3E-23 171.7 10.4 196 408-623 184-436 (475)
71 cd05060 PTKc_Syk_like Catalyti 99.8 8.2E-19 1.8E-23 174.9 9.8 199 407-629 6-256 (257)
72 cd05069 PTKc_Yes Catalytic dom 99.8 2.9E-18 6.4E-23 171.3 13.6 197 407-627 17-259 (260)
73 cd05065 PTKc_EphR_B Catalytic 99.8 1.7E-18 3.6E-23 174.0 11.7 199 407-628 15-268 (269)
74 cd05043 PTK_Ryk Pseudokinase d 99.8 1.2E-18 2.7E-23 176.0 10.8 201 407-630 17-278 (280)
75 cd05053 PTKc_FGFR Catalytic do 99.8 1.9E-18 4.1E-23 175.9 12.1 217 407-629 23-292 (293)
76 KOG0575 Polo-like serine/threo 99.8 2.2E-18 4.8E-23 178.0 12.6 192 407-623 29-268 (592)
77 cd05039 PTKc_Csk_like Catalyti 99.8 9.7E-19 2.1E-23 174.3 9.7 203 407-628 17-256 (256)
78 cd05058 PTKc_Met_Ron Catalytic 99.8 1.1E-18 2.3E-23 174.6 9.6 200 407-629 6-260 (262)
79 cd05084 PTKc_Fes Catalytic dom 99.8 1.2E-18 2.6E-23 173.2 9.6 200 407-626 6-251 (252)
80 cd05071 PTKc_Src Catalytic dom 99.8 3.6E-18 7.8E-23 170.9 13.1 198 407-628 17-260 (262)
81 cd05066 PTKc_EphR_A Catalytic 99.8 2.1E-18 4.6E-23 173.1 11.4 205 407-628 15-266 (267)
82 cd08228 STKc_Nek6 Catalytic do 99.8 4.9E-18 1.1E-22 170.3 13.9 203 407-629 13-266 (267)
83 cd05035 PTKc_Axl_like Catalyti 99.8 2.7E-18 5.8E-23 172.7 12.1 205 407-628 10-272 (273)
84 cd05101 PTKc_FGFR2 Catalytic d 99.8 1.8E-18 3.9E-23 177.1 10.9 207 407-630 26-298 (304)
85 KOG0595 Serine/threonine-prote 99.8 1E-18 2.2E-23 172.1 8.5 144 407-554 21-216 (429)
86 cd05079 PTKc_Jak1_rpt2 Catalyt 99.8 4.9E-18 1.1E-22 172.1 13.8 208 407-628 15-283 (284)
87 KOG0582 Ste20-like serine/thre 99.8 3.5E-18 7.7E-23 169.7 12.1 200 410-623 40-292 (516)
88 cd05048 PTKc_Ror Catalytic Dom 99.8 2.1E-18 4.5E-23 174.7 10.4 198 407-627 16-282 (283)
89 cd05045 PTKc_RET Catalytic dom 99.8 4.4E-18 9.4E-23 173.0 12.7 200 407-629 11-287 (290)
90 cd05103 PTKc_VEGFR2 Catalytic 99.8 4.2E-18 9E-23 177.4 12.9 202 407-630 18-341 (343)
91 PTZ00283 serine/threonine prot 99.8 2.7E-18 5.9E-23 186.6 11.6 195 407-624 43-297 (496)
92 cd08229 STKc_Nek7 Catalytic do 99.8 5.1E-18 1.1E-22 170.2 12.8 202 407-628 13-265 (267)
93 cd05047 PTKc_Tie Catalytic dom 99.8 2.9E-18 6.4E-23 172.3 10.9 200 407-629 6-269 (270)
94 cd05097 PTKc_DDR_like Catalyti 99.8 3.3E-18 7.2E-23 174.3 11.4 203 407-626 16-294 (295)
95 cd05091 PTKc_Ror2 Catalytic do 99.8 4.9E-18 1.1E-22 171.9 12.5 197 407-626 16-281 (283)
96 cd05070 PTKc_Fyn_Yrk Catalytic 99.8 2.9E-18 6.3E-23 171.3 10.4 197 407-627 17-259 (260)
97 cd05088 PTKc_Tie2 Catalytic do 99.8 4.9E-18 1.1E-22 173.8 12.1 220 407-632 18-284 (303)
98 KOG1025 Epidermal growth facto 99.8 2.6E-18 5.6E-23 181.5 10.1 217 408-630 708-959 (1177)
99 cd05089 PTKc_Tie1 Catalytic do 99.7 3.7E-18 7.9E-23 174.2 11.1 203 407-632 13-279 (297)
100 cd05067 PTKc_Lck_Blk Catalytic 99.7 3.3E-18 7.2E-23 170.9 10.5 197 407-627 17-259 (260)
101 cd05056 PTKc_FAK Catalytic dom 99.7 4.3E-18 9.3E-23 171.1 11.2 201 407-630 17-267 (270)
102 KOG0593 Predicted protein kina 99.7 3.9E-18 8.5E-23 161.2 9.9 117 408-528 14-153 (396)
103 KOG4721 Serine/threonine prote 99.7 6.6E-19 1.4E-23 178.8 5.0 214 409-633 137-373 (904)
104 cd05049 PTKc_Trk Catalytic dom 99.7 3.5E-18 7.5E-23 172.7 10.3 197 407-626 16-279 (280)
105 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.7 3.1E-18 6.6E-23 172.6 9.4 180 421-625 45-273 (274)
106 cd05585 STKc_YPK1_like Catalyt 99.7 5.3E-18 1.1E-22 174.2 11.2 116 407-526 4-143 (312)
107 cd05105 PTKc_PDGFR_alpha Catal 99.7 4.3E-18 9.3E-23 180.0 10.5 156 469-629 233-398 (400)
108 cd06642 STKc_STK25-YSK1 Cataly 99.7 1.1E-17 2.4E-22 168.8 13.1 193 407-624 15-253 (277)
109 cd06624 STKc_ASK Catalytic dom 99.7 7.8E-18 1.7E-22 169.0 11.8 196 407-623 19-264 (268)
110 cd08529 STKc_FA2-like Catalyti 99.7 6E-18 1.3E-22 168.5 10.8 195 407-624 11-253 (256)
111 cd05098 PTKc_FGFR1 Catalytic d 99.7 4.3E-18 9.3E-23 174.5 9.9 208 407-631 29-302 (307)
112 cd05110 PTKc_HER4 Catalytic do 99.7 5.1E-18 1.1E-22 173.6 10.2 203 407-632 18-272 (303)
113 cd05062 PTKc_IGF-1R Catalytic 99.7 3.1E-18 6.8E-23 172.8 8.4 197 407-626 17-276 (277)
114 cd05041 PTKc_Fes_like Catalyti 99.7 6.5E-18 1.4E-22 167.8 10.5 197 407-626 6-250 (251)
115 cd05077 PTK_Jak1_rpt1 Pseudoki 99.7 7.4E-18 1.6E-22 168.6 10.9 202 407-625 6-261 (262)
116 cd06654 STKc_PAK1 Catalytic do 99.7 7.1E-18 1.5E-22 171.9 10.9 195 407-624 31-270 (296)
117 cd06643 STKc_SLK Catalytic dom 99.7 2.7E-17 5.9E-22 166.4 14.8 117 407-526 16-153 (282)
118 cd05037 PTK_Jak_rpt1 Pseudokin 99.7 7.7E-18 1.7E-22 168.0 10.5 195 407-625 6-258 (259)
119 cd05083 PTKc_Chk Catalytic dom 99.7 6.8E-18 1.5E-22 168.0 10.1 195 407-627 17-253 (254)
120 cd05100 PTKc_FGFR3 Catalytic d 99.7 1.1E-17 2.4E-22 173.6 11.6 218 407-630 23-295 (334)
121 cd05050 PTKc_Musk Catalytic do 99.7 1.9E-17 4.2E-22 168.0 13.1 198 407-627 16-288 (288)
122 cd05092 PTKc_TrkA Catalytic do 99.7 4.6E-18 1E-22 171.9 8.4 203 407-626 16-279 (280)
123 cd05040 PTKc_Ack_like Catalyti 99.7 7.6E-18 1.7E-22 167.9 9.9 198 407-626 6-256 (257)
124 cd05090 PTKc_Ror1 Catalytic do 99.7 7.9E-18 1.7E-22 170.4 10.1 200 407-626 16-281 (283)
125 cd05631 STKc_GRK4 Catalytic do 99.7 7.7E-18 1.7E-22 170.7 9.9 118 407-527 11-153 (285)
126 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.7 2.8E-17 6E-22 165.1 13.8 117 407-526 6-150 (269)
127 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.7 3.5E-18 7.6E-23 170.5 7.1 202 407-625 6-257 (258)
128 cd05099 PTKc_FGFR4 Catalytic d 99.7 1.4E-17 3E-22 171.3 11.5 220 407-632 23-297 (314)
129 cd06649 PKc_MEK2 Catalytic dom 99.7 3.2E-17 6.9E-22 169.9 14.0 145 407-554 16-204 (331)
130 cd05112 PTKc_Itk Catalytic dom 99.7 8.2E-18 1.8E-22 167.6 9.2 195 407-625 15-255 (256)
131 cd05055 PTKc_PDGFR Catalytic d 99.7 2.3E-17 5E-22 168.7 12.6 200 407-628 46-301 (302)
132 cd05034 PTKc_Src_like Catalyti 99.7 7.8E-18 1.7E-22 168.2 9.0 197 407-627 17-260 (261)
133 cd00116 LRR_RI Leucine-rich re 99.7 3.7E-19 7.9E-24 183.5 -0.8 280 57-382 3-319 (319)
134 cd05051 PTKc_DDR Catalytic dom 99.7 1.4E-17 3.1E-22 169.7 11.0 206 407-626 16-295 (296)
135 cd05086 PTKc_Aatyk2 Catalytic 99.7 4.1E-17 9E-22 163.8 14.0 116 407-525 6-148 (268)
136 cd05107 PTKc_PDGFR_beta Cataly 99.7 9.7E-18 2.1E-22 177.2 9.8 155 469-628 235-399 (401)
137 cd05073 PTKc_Hck Catalytic dom 99.7 2E-17 4.4E-22 165.2 11.3 197 407-627 17-259 (260)
138 cd08528 STKc_Nek10 Catalytic d 99.7 4.2E-17 9.1E-22 163.8 13.6 199 407-626 11-268 (269)
139 cd05036 PTKc_ALK_LTK Catalytic 99.7 1.3E-17 2.7E-22 168.4 9.8 197 407-626 17-276 (277)
140 cd05057 PTKc_EGFR_like Catalyt 99.7 2.4E-17 5.2E-22 166.5 11.8 201 407-630 18-270 (279)
141 cd06646 STKc_MAP4K5 Catalytic 99.7 1.7E-17 3.8E-22 166.3 10.7 117 407-527 20-157 (267)
142 cd00192 PTKc Catalytic domain 99.7 1.7E-17 3.7E-22 165.5 10.4 197 407-626 6-262 (262)
143 cd05594 STKc_PKB_alpha Catalyt 99.7 3.9E-17 8.4E-22 168.8 13.4 194 407-624 6-252 (325)
144 cd05061 PTKc_InsR Catalytic do 99.7 1.2E-17 2.7E-22 169.5 9.4 205 407-628 17-278 (288)
145 KOG0199 ACK and related non-re 99.7 1.5E-17 3.3E-22 172.8 10.0 210 407-626 121-370 (1039)
146 cd06640 STKc_MST4 Catalytic do 99.7 4E-17 8.7E-22 164.7 13.0 199 407-624 15-253 (277)
147 cd05095 PTKc_DDR2 Catalytic do 99.7 2.6E-17 5.6E-22 167.8 11.6 189 421-626 47-295 (296)
148 KOG4257 Focal adhesion tyrosin 99.7 1.3E-17 2.9E-22 171.1 8.8 209 409-631 402-652 (974)
149 PLN00034 mitogen-activated pro 99.7 2.1E-17 4.5E-22 172.9 10.5 193 407-624 85-328 (353)
150 cd05571 STKc_PKB Catalytic dom 99.7 2E-17 4.4E-22 170.7 10.2 116 407-526 6-145 (323)
151 KOG0583 Serine/threonine prote 99.7 4.2E-17 9.1E-22 168.8 12.4 191 407-622 28-273 (370)
152 cd05042 PTKc_Aatyk Catalytic d 99.7 4.8E-17 1E-21 163.4 12.6 117 407-526 6-150 (269)
153 cd06644 STKc_STK10_LOK Catalyt 99.7 1.1E-16 2.3E-21 162.9 15.2 196 407-623 23-268 (292)
154 cd05074 PTKc_Tyro3 Catalytic d 99.7 2.9E-17 6.4E-22 165.2 10.9 199 407-628 10-272 (273)
155 PTZ00267 NIMA-related protein 99.7 1.4E-17 3E-22 180.9 9.1 194 407-623 78-322 (478)
156 cd05032 PTKc_InsR_like Catalyt 99.7 2.4E-17 5.2E-22 166.3 10.2 197 407-626 17-276 (277)
157 cd00116 LRR_RI Leucine-rich re 99.7 2.5E-18 5.4E-23 177.3 3.0 277 80-406 2-319 (319)
158 cd07859 STKc_TDY_MAPK_plant Ca 99.7 2.1E-17 4.5E-22 171.9 9.9 115 407-526 11-153 (338)
159 cd07862 STKc_CDK6 Catalytic do 99.7 5.6E-17 1.2E-21 164.8 12.8 208 407-623 12-286 (290)
160 cd05601 STKc_CRIK Catalytic do 99.7 8.7E-17 1.9E-21 166.6 14.4 119 407-528 12-154 (330)
161 cd06611 STKc_SLK_like Catalyti 99.7 7.8E-17 1.7E-21 162.9 13.6 197 407-624 16-262 (280)
162 cd05593 STKc_PKB_gamma Catalyt 99.7 3.1E-17 6.8E-22 169.6 10.9 116 407-526 6-145 (328)
163 cd05582 STKc_RSK_N N-terminal 99.7 4.6E-17 1E-21 167.7 11.4 189 407-620 7-245 (318)
164 cd05591 STKc_nPKC_epsilon Cata 99.7 6E-17 1.3E-21 167.1 12.3 116 407-526 6-146 (321)
165 cd07871 STKc_PCTAIRE3 Catalyti 99.7 4.2E-17 9E-22 165.6 10.8 117 407-527 16-154 (288)
166 cd05590 STKc_nPKC_eta Catalyti 99.7 5.2E-17 1.1E-21 167.4 11.7 116 407-526 6-146 (320)
167 cd05595 STKc_PKB_beta Catalyti 99.7 2.8E-17 6.1E-22 169.6 9.1 116 407-526 6-145 (323)
168 cd06641 STKc_MST3 Catalytic do 99.7 5.1E-17 1.1E-21 164.0 10.6 193 407-624 15-253 (277)
169 cd05044 PTKc_c-ros Catalytic d 99.7 2.9E-17 6.3E-22 164.9 8.7 203 407-626 6-268 (269)
170 cd06612 STKc_MST1_2 Catalytic 99.7 6.5E-17 1.4E-21 161.0 11.1 194 407-623 14-252 (256)
171 cd05586 STKc_Sck1_like Catalyt 99.7 6.7E-17 1.5E-21 167.5 11.6 116 407-526 4-146 (330)
172 cd06655 STKc_PAK2 Catalytic do 99.7 1E-16 2.2E-21 163.3 12.7 194 407-623 30-268 (296)
173 cd06650 PKc_MEK1 Catalytic dom 99.7 7.9E-17 1.7E-21 167.0 12.0 118 407-527 16-155 (333)
174 cd07848 STKc_CDKL5 Catalytic d 99.7 1.2E-16 2.6E-21 162.1 13.1 212 407-623 12-283 (287)
175 cd05612 STKc_PRKX_like Catalyt 99.7 2.4E-17 5.2E-22 167.6 7.9 192 407-623 12-253 (291)
176 cd06656 STKc_PAK3 Catalytic do 99.7 5.7E-17 1.2E-21 165.4 10.6 117 407-528 30-167 (297)
177 cd05600 STKc_Sid2p_Dbf2p Catal 99.7 4.5E-17 9.7E-22 169.0 10.0 201 407-624 12-257 (333)
178 cd05573 STKc_ROCK_NDR_like Cat 99.7 1.5E-16 3.3E-21 166.3 14.0 118 407-528 12-153 (350)
179 smart00219 TyrKc Tyrosine kina 99.7 5.9E-17 1.3E-21 161.3 10.2 196 407-625 10-258 (258)
180 cd08217 STKc_Nek2 Catalytic do 99.7 5E-17 1.1E-21 162.5 9.6 198 407-624 11-262 (265)
181 cd05619 STKc_nPKC_theta Cataly 99.7 8.9E-17 1.9E-21 165.3 11.5 115 407-525 6-145 (316)
182 KOG0200 Fibroblast/platelet-de 99.7 1E-16 2.2E-21 177.7 12.7 199 408-628 308-579 (609)
183 cd07869 STKc_PFTAIRE1 Catalyti 99.7 8.5E-17 1.8E-21 164.6 11.1 116 407-526 16-153 (303)
184 cd05614 STKc_MSK2_N N-terminal 99.7 1.4E-16 3.1E-21 165.2 12.8 117 407-527 11-156 (332)
185 cd05608 STKc_GRK1 Catalytic do 99.7 5.4E-17 1.2E-21 164.1 9.4 119 407-528 4-149 (280)
186 cd06638 STKc_myosinIIIA Cataly 99.7 2.2E-16 4.8E-21 160.0 13.9 196 407-624 29-283 (286)
187 cd06639 STKc_myosinIIIB Cataly 99.7 1.9E-16 4E-21 161.1 13.2 195 407-623 33-286 (291)
188 cd08219 STKc_Nek3 Catalytic do 99.7 9.2E-17 2E-21 159.9 10.6 195 407-624 11-252 (255)
189 cd06619 PKc_MKK5 Catalytic dom 99.7 1.8E-16 3.9E-21 160.1 12.9 196 407-624 12-253 (279)
190 cd05605 STKc_GRK4_like Catalyt 99.7 1.4E-16 3E-21 161.5 12.1 118 407-527 11-153 (285)
191 cd07841 STKc_CDK7 Catalytic do 99.7 2.5E-16 5.5E-21 160.7 14.1 212 407-624 11-282 (298)
192 cd05570 STKc_PKC Catalytic dom 99.7 1.4E-16 3E-21 164.2 12.2 115 407-525 6-145 (318)
193 cd05617 STKc_aPKC_zeta Catalyt 99.7 1.1E-16 2.5E-21 165.4 11.4 115 407-525 6-145 (327)
194 cd05618 STKc_aPKC_iota Catalyt 99.7 1.2E-16 2.5E-21 165.4 11.4 116 407-526 6-146 (329)
195 cd05607 STKc_GRK7 Catalytic do 99.7 6.4E-17 1.4E-21 163.2 9.2 201 407-626 4-252 (277)
196 cd06637 STKc_TNIK Catalytic do 99.7 7.1E-17 1.5E-21 162.4 9.4 194 407-623 17-268 (272)
197 cd06632 STKc_MEKK1_plant Catal 99.7 1.3E-16 2.8E-21 159.0 11.1 194 407-623 11-254 (258)
198 cd05592 STKc_nPKC_theta_delta 99.7 5E-17 1.1E-21 167.2 8.3 116 407-526 6-146 (316)
199 KOG2345 Serine/threonine prote 99.7 9.7E-17 2.1E-21 147.9 9.1 204 407-628 32-300 (302)
200 KOG0201 Serine/threonine prote 99.7 9.7E-17 2.1E-21 159.5 9.7 193 407-623 24-262 (467)
201 cd06605 PKc_MAPKK Catalytic do 99.7 2.4E-16 5.3E-21 157.8 12.7 200 407-623 12-256 (265)
202 cd08223 STKc_Nek4 Catalytic do 99.7 1.3E-16 2.8E-21 159.0 10.6 195 407-624 11-254 (257)
203 cd06620 PKc_MAPKK_Byr1_like Ca 99.7 2.1E-16 4.6E-21 160.0 12.3 205 407-628 16-270 (284)
204 cd06648 STKc_PAK_II Catalytic 99.7 3.5E-16 7.5E-21 158.6 13.8 194 407-623 30-268 (285)
205 cd06629 STKc_MAPKKK_Bck1_like 99.7 3.2E-16 6.9E-21 157.6 13.4 199 407-624 12-269 (272)
206 cd06621 PKc_MAPKK_Pek1_like Ca 99.7 3.2E-16 6.9E-21 159.0 13.4 202 407-623 12-265 (287)
207 cd07873 STKc_PCTAIRE1 Catalyti 99.7 1.8E-16 3.8E-21 162.1 11.5 211 407-623 17-285 (301)
208 cd06658 STKc_PAK5 Catalytic do 99.7 1.1E-16 2.4E-21 162.8 9.9 195 407-624 33-272 (292)
209 cd08218 STKc_Nek1 Catalytic do 99.7 1.1E-16 2.3E-21 159.6 9.5 195 407-624 11-253 (256)
210 cd05046 PTK_CCK4 Pseudokinase 99.7 3.5E-16 7.6E-21 157.6 13.4 198 407-626 16-274 (275)
211 cd06609 STKc_MST3_like Catalyt 99.7 1.3E-16 2.8E-21 160.6 10.3 193 407-623 12-250 (274)
212 cd07872 STKc_PCTAIRE2 Catalyti 99.7 1.3E-16 2.9E-21 163.6 10.4 116 407-526 17-154 (309)
213 cd05575 STKc_SGK Catalytic dom 99.7 1E-16 2.2E-21 165.6 9.3 116 407-526 6-146 (323)
214 cd07847 STKc_CDKL1_4 Catalytic 99.7 2.8E-16 6.1E-21 159.2 12.3 212 407-623 12-282 (286)
215 PRK13184 pknD serine/threonine 99.7 1.4E-16 3.1E-21 178.4 11.0 117 407-526 13-163 (932)
216 cd06651 STKc_MEKK3 Catalytic d 99.7 2.3E-16 4.9E-21 158.2 11.5 117 407-527 13-157 (266)
217 cd08227 PK_STRAD_alpha Pseudok 99.7 3.1E-16 6.8E-21 162.2 12.9 114 408-524 12-149 (327)
218 PTZ00426 cAMP-dependent protei 99.7 1.7E-16 3.7E-21 164.8 10.7 118 407-528 41-183 (340)
219 PTZ00263 protein kinase A cata 99.7 1E-16 2.2E-21 165.9 9.0 118 407-528 29-170 (329)
220 cd06626 STKc_MEKK4 Catalytic d 99.7 3.2E-16 7E-21 156.7 12.3 196 407-623 11-260 (264)
221 cd05579 STKc_MAST_like Catalyt 99.7 2.6E-16 5.6E-21 157.3 11.4 117 407-527 4-144 (265)
222 cd05602 STKc_SGK1 Catalytic do 99.7 3.3E-16 7.2E-21 161.9 12.5 116 407-526 6-146 (325)
223 cd06623 PKc_MAPKK_plant_like C 99.7 2.9E-16 6.4E-21 157.0 11.7 196 407-624 12-256 (264)
224 cd05584 STKc_p70S6K Catalytic 99.7 1.5E-16 3.3E-21 164.2 9.8 116 407-526 7-150 (323)
225 cd05620 STKc_nPKC_delta Cataly 99.7 1.5E-16 3.1E-21 163.8 9.5 115 407-525 6-145 (316)
226 cd06622 PKc_MAPKK_PBS2_like Ca 99.7 3.3E-16 7E-21 158.8 11.9 119 407-527 12-154 (286)
227 cd05588 STKc_aPKC Catalytic do 99.7 2.6E-16 5.6E-21 162.9 11.3 115 407-525 6-145 (329)
228 cd07846 STKc_CDKL2_3 Catalytic 99.7 2.5E-16 5.4E-21 159.7 10.9 208 407-623 12-282 (286)
229 cd06613 STKc_MAP4K3_like Catal 99.7 2.9E-16 6.2E-21 156.9 11.2 118 407-527 14-152 (262)
230 cd08221 STKc_Nek9 Catalytic do 99.7 2.2E-16 4.7E-21 157.3 10.1 194 408-624 12-253 (256)
231 cd06645 STKc_MAP4K3 Catalytic 99.7 3.1E-16 6.8E-21 157.2 11.3 117 407-527 20-157 (267)
232 KOG0592 3-phosphoinositide-dep 99.7 1.4E-16 3E-21 162.2 8.6 117 409-529 86-227 (604)
233 cd05122 PKc_STE Catalytic doma 99.7 2.4E-16 5.1E-21 156.2 10.1 196 407-623 11-250 (253)
234 cd05587 STKc_cPKC Catalytic do 99.7 1.5E-16 3.3E-21 164.3 9.0 115 407-525 11-150 (324)
235 cd07832 STKc_CCRK Catalytic do 99.7 2.4E-16 5.3E-21 159.6 10.2 212 407-624 11-282 (286)
236 cd07861 STKc_CDK1_euk Catalyti 99.7 4.4E-16 9.6E-21 157.7 12.0 116 407-526 11-151 (285)
237 cd06917 STKc_NAK1_like Catalyt 99.7 3.5E-16 7.7E-21 157.8 11.1 194 407-624 12-255 (277)
238 cd06614 STKc_PAK Catalytic dom 99.7 2.8E-16 6.2E-21 159.3 10.5 196 407-624 30-270 (286)
239 KOG0588 Serine/threonine prote 99.7 1.3E-16 2.9E-21 165.6 8.0 190 410-624 26-263 (786)
240 KOG0617 Ras suppressor protein 99.7 1.2E-18 2.6E-23 151.4 -5.9 159 53-234 34-193 (264)
241 cd06647 STKc_PAK_I Catalytic d 99.7 4.4E-16 9.5E-21 158.5 11.8 201 407-624 30-269 (293)
242 cd06631 STKc_YSK4 Catalytic do 99.7 1.9E-16 4.2E-21 158.6 9.0 116 407-526 11-152 (265)
243 cd08220 STKc_Nek8 Catalytic do 99.7 2.8E-16 6E-21 156.4 10.0 194 407-623 11-252 (256)
244 cd07839 STKc_CDK5 Catalytic do 99.7 3.9E-16 8.5E-21 158.0 11.2 212 407-623 11-280 (284)
245 cd05616 STKc_cPKC_beta Catalyt 99.7 2.8E-16 6E-21 162.3 10.3 116 407-526 11-151 (323)
246 cd06635 STKc_TAO1 Catalytic do 99.7 5.2E-16 1.1E-20 159.8 12.3 195 407-624 36-277 (317)
247 cd05633 STKc_GRK3 Catalytic do 99.7 2.2E-16 4.8E-21 159.5 9.2 196 407-624 5-255 (279)
248 cd05596 STKc_ROCK Catalytic do 99.7 8.1E-16 1.8E-20 161.7 13.8 116 407-527 54-193 (370)
249 cd06659 STKc_PAK6 Catalytic do 99.7 2.1E-16 4.5E-21 161.2 8.9 195 407-624 32-271 (297)
250 cd06607 STKc_TAO Catalytic dom 99.7 6E-16 1.3E-20 158.6 12.3 195 407-624 26-267 (307)
251 cd06617 PKc_MKK3_6 Catalytic d 99.7 5.3E-16 1.2E-20 156.9 11.8 118 407-527 12-155 (283)
252 cd05632 STKc_GRK5 Catalytic do 99.7 2.3E-16 5.1E-21 159.8 9.1 118 407-527 11-153 (285)
253 cd05604 STKc_SGK3 Catalytic do 99.7 1.8E-16 3.9E-21 163.9 8.4 116 407-526 6-146 (325)
254 KOG0574 STE20-like serine/thre 99.7 7.2E-17 1.6E-21 152.1 4.7 194 407-623 44-282 (502)
255 PLN03150 hypothetical protein; 99.7 5E-16 1.1E-20 172.4 12.3 148 6-159 369-526 (623)
256 cd05615 STKc_cPKC_alpha Cataly 99.7 2.8E-16 6E-21 162.2 9.5 116 407-526 11-151 (323)
257 KOG0658 Glycogen synthase kina 99.6 3.4E-16 7.3E-21 152.8 9.2 206 408-623 36-305 (364)
258 KOG0594 Protein kinase PCTAIRE 99.6 4E-16 8.7E-21 152.4 9.8 116 408-527 23-171 (323)
259 KOG0599 Phosphorylase kinase g 99.6 1.3E-16 2.8E-21 148.7 5.9 162 448-624 99-283 (411)
260 cd06628 STKc_MAPKKK_Byr2_like 99.6 3.5E-16 7.6E-21 156.8 9.6 117 407-527 11-157 (267)
261 KOG0663 Protein kinase PITSLRE 99.6 4.6E-16 9.9E-21 149.3 9.8 120 407-530 87-231 (419)
262 cd07853 STKc_NLK Catalytic dom 99.6 5.6E-16 1.2E-20 163.3 11.6 116 407-527 11-154 (372)
263 cd05589 STKc_PKN Catalytic dom 99.6 4E-16 8.6E-21 161.2 10.2 115 407-526 10-151 (324)
264 cd05118 STKc_CMGC Catalytic do 99.6 1E-15 2.2E-20 154.8 12.9 211 407-623 10-279 (283)
265 cd08225 STKc_Nek5 Catalytic do 99.6 3E-16 6.5E-21 156.3 8.8 194 407-623 11-253 (257)
266 cd06625 STKc_MEKK3_like Cataly 99.6 3.6E-16 7.7E-21 156.4 9.2 195 407-624 13-260 (263)
267 cd07860 STKc_CDK2_3 Catalytic 99.6 6.4E-16 1.4E-20 156.5 11.1 117 407-527 11-151 (284)
268 cd05603 STKc_SGK2 Catalytic do 99.6 3.6E-16 7.8E-21 161.3 9.2 116 407-526 6-146 (321)
269 cd07835 STKc_CDK1_like Catalyt 99.6 3.7E-16 8.1E-21 158.1 9.0 212 407-623 10-279 (283)
270 cd06634 STKc_TAO2 Catalytic do 99.6 1E-15 2.2E-20 157.0 12.3 195 407-624 26-267 (308)
271 KOG0617 Ras suppressor protein 99.6 4.2E-18 9.2E-23 148.0 -4.8 164 72-294 29-192 (264)
272 PF00069 Pkinase: Protein kina 99.6 1.3E-16 2.8E-21 159.1 5.1 116 407-526 10-148 (260)
273 cd07844 STKc_PCTAIRE_like Cata 99.6 4.9E-16 1.1E-20 158.0 9.3 116 407-526 16-153 (291)
274 cd07852 STKc_MAPK15 Catalytic 99.6 7.4E-16 1.6E-20 160.2 10.7 209 407-624 18-295 (337)
275 cd07870 STKc_PFTAIRE2 Catalyti 99.6 8.6E-16 1.9E-20 156.2 10.8 116 407-526 16-153 (291)
276 cd06615 PKc_MEK Catalytic doma 99.6 9.1E-16 2E-20 157.3 11.0 213 407-624 12-287 (308)
277 cd07840 STKc_CDK9_like Catalyt 99.6 9.4E-16 2E-20 155.3 10.9 211 407-623 10-283 (287)
278 cd07831 STKc_MOK Catalytic dom 99.6 1.2E-15 2.7E-20 154.1 11.7 208 407-623 10-278 (282)
279 cd08216 PK_STRAD Pseudokinase 99.6 2.8E-15 6.2E-20 154.1 14.4 114 410-526 14-151 (314)
280 cd05630 STKc_GRK6 Catalytic do 99.6 5.7E-16 1.2E-20 156.9 8.9 118 407-527 11-153 (285)
281 cd05609 STKc_MAST Catalytic do 99.6 1.7E-15 3.6E-20 155.2 12.3 115 407-525 12-150 (305)
282 cd07874 STKc_JNK3 Catalytic do 99.6 1.2E-15 2.5E-20 159.9 11.2 115 407-528 28-171 (355)
283 cd07863 STKc_CDK4 Catalytic do 99.6 2.4E-15 5.2E-20 152.6 13.0 209 407-623 11-284 (288)
284 cd06618 PKc_MKK7 Catalytic dom 99.6 1.2E-15 2.7E-20 155.5 10.7 198 407-624 26-273 (296)
285 cd07843 STKc_CDC2L1 Catalytic 99.6 7.9E-16 1.7E-20 156.6 9.3 118 407-528 16-158 (293)
286 cd05597 STKc_DMPK_like Catalyt 99.6 4.1E-15 8.9E-20 154.1 14.6 118 407-527 12-153 (331)
287 KOG0589 Serine/threonine prote 99.6 8.5E-16 1.8E-20 156.8 9.0 193 409-624 17-258 (426)
288 PHA03390 pk1 serine/threonine- 99.6 1.3E-15 2.9E-20 152.7 10.4 196 407-623 27-261 (267)
289 KOG0585 Ca2+/calmodulin-depend 99.6 2.4E-15 5.1E-20 150.7 11.7 206 409-624 110-372 (576)
290 cd05574 STKc_phototropin_like 99.6 3.3E-15 7.2E-20 153.8 13.2 118 407-527 12-154 (316)
291 cd06608 STKc_myosinIII_like Ca 99.6 3.3E-15 7.2E-20 150.2 12.9 195 407-623 17-271 (275)
292 smart00220 S_TKc Serine/Threon 99.6 1.3E-15 2.8E-20 149.9 9.6 195 408-623 1-240 (244)
293 cd08530 STKc_CNK2-like Catalyt 99.6 2.3E-15 5E-20 149.7 11.6 194 407-623 11-252 (256)
294 cd06627 STKc_Cdc7_like Catalyt 99.6 1.1E-15 2.4E-20 151.8 9.2 193 407-623 11-250 (254)
295 cd06657 STKc_PAK4 Catalytic do 99.6 1.2E-15 2.6E-20 155.2 9.5 116 407-527 31-167 (292)
296 PTZ00036 glycogen synthase kin 99.6 1.7E-15 3.6E-20 162.7 11.1 207 407-623 77-350 (440)
297 cd08215 STKc_Nek Catalytic dom 99.6 1.2E-15 2.5E-20 151.9 9.1 194 407-623 11-254 (258)
298 cd06610 STKc_OSR1_SPAK Catalyt 99.6 2.5E-15 5.3E-20 150.5 11.5 199 407-623 12-263 (267)
299 cd08226 PK_STRAD_beta Pseudoki 99.6 2.9E-15 6.3E-20 155.1 12.3 116 406-524 10-149 (328)
300 KOG0580 Serine/threonine prote 99.6 7.6E-16 1.7E-20 141.4 6.8 193 408-624 34-273 (281)
301 cd05583 STKc_MSK_N N-terminal 99.6 3E-15 6.6E-20 151.9 12.0 201 407-628 11-267 (288)
302 PTZ00266 NIMA-related protein 99.6 8.6E-16 1.9E-20 172.9 8.7 197 407-623 24-294 (1021)
303 cd07865 STKc_CDK9 Catalytic do 99.6 2E-15 4.3E-20 154.9 10.7 117 407-527 23-170 (310)
304 cd06630 STKc_MEKK1 Catalytic d 99.6 5.4E-15 1.2E-19 148.2 13.6 197 407-623 11-263 (268)
305 cd05623 STKc_MRCK_alpha Cataly 99.6 5.3E-15 1.2E-19 153.3 13.9 118 407-527 12-153 (332)
306 PHA03212 serine/threonine kina 99.6 2.3E-15 5E-20 159.0 11.3 109 407-526 103-232 (391)
307 cd07838 STKc_CDK4_6_like Catal 99.6 7.1E-15 1.5E-19 148.9 14.4 212 407-623 10-283 (287)
308 cd07830 STKc_MAK_like Catalyti 99.6 5.6E-15 1.2E-19 149.5 13.4 118 407-528 10-151 (283)
309 cd07855 STKc_ERK5 Catalytic do 99.6 2E-15 4.3E-20 156.7 10.3 211 407-624 16-294 (334)
310 cd05624 STKc_MRCK_beta Catalyt 99.6 5.3E-15 1.2E-19 153.2 13.4 119 407-528 12-154 (331)
311 cd07837 STKc_CdkB_plant Cataly 99.6 2.9E-15 6.3E-20 152.5 11.2 209 407-623 12-290 (295)
312 KOG0577 Serine/threonine prote 99.6 3.8E-15 8.3E-20 152.4 11.6 122 407-532 37-182 (948)
313 PLN00009 cyclin-dependent kina 99.6 4.5E-15 9.8E-20 151.1 12.4 116 407-526 13-153 (294)
314 cd06633 STKc_TAO3 Catalytic do 99.6 7.3E-15 1.6E-19 151.0 14.0 195 407-624 32-273 (313)
315 cd06652 STKc_MEKK2 Catalytic d 99.6 2.9E-15 6.3E-20 150.0 10.8 117 407-527 13-157 (265)
316 PLN03225 Serine/threonine-prot 99.6 1.7E-15 3.7E-20 166.2 9.8 118 407-527 143-307 (566)
317 cd07876 STKc_JNK2 Catalytic do 99.6 4E-15 8.6E-20 156.1 11.9 114 407-527 32-174 (359)
318 KOG0598 Ribosomal protein S6 k 99.6 1.8E-15 4E-20 148.0 8.6 119 407-529 36-178 (357)
319 PHA03207 serine/threonine kina 99.6 3.3E-15 7.2E-20 158.4 11.2 112 407-528 103-237 (392)
320 cd07829 STKc_CDK_like Catalyti 99.6 6.1E-15 1.3E-19 149.0 12.6 211 407-623 10-278 (282)
321 PHA03209 serine/threonine kina 99.6 2.8E-15 6.1E-20 156.9 10.4 110 407-526 77-207 (357)
322 cd07849 STKc_ERK1_2_like Catal 99.6 2.9E-15 6.4E-20 155.6 10.4 210 407-624 16-292 (336)
323 cd06636 STKc_MAP4K4_6 Catalyti 99.6 3.5E-15 7.5E-20 151.0 10.6 117 407-527 27-172 (282)
324 cd05611 STKc_Rim15_like Cataly 99.6 1.7E-15 3.6E-20 151.3 8.2 199 407-626 7-250 (260)
325 cd07833 STKc_CDKL Catalytic do 99.6 2.1E-15 4.5E-20 153.0 8.9 211 407-623 12-284 (288)
326 cd05606 STKc_beta_ARK Catalyti 99.6 3.5E-15 7.5E-20 150.6 10.5 117 407-527 5-148 (278)
327 cd05628 STKc_NDR1 Catalytic do 99.6 2.5E-15 5.3E-20 157.8 9.7 117 407-527 12-152 (363)
328 cd06606 STKc_MAPKKK Catalytic 99.6 3.3E-15 7.2E-20 148.6 10.1 195 407-623 11-256 (260)
329 cd07836 STKc_Pho85 Catalytic d 99.6 4.6E-15 1E-19 150.2 11.3 212 407-623 11-280 (284)
330 cd07845 STKc_CDK10 Catalytic d 99.6 5.3E-15 1.1E-19 151.8 11.6 212 407-624 18-290 (309)
331 cd05578 STKc_Yank1 Catalytic d 99.6 4.6E-15 9.9E-20 147.9 10.8 194 407-622 11-253 (258)
332 cd07864 STKc_CDK12 Catalytic d 99.6 3.2E-15 6.9E-20 152.8 9.8 211 407-623 18-298 (302)
333 cd07858 STKc_TEY_MAPK_plant Ca 99.6 2.5E-15 5.3E-20 156.2 9.0 211 407-624 16-291 (337)
334 cd07878 STKc_p38beta_MAPK11 Ca 99.6 6.3E-15 1.4E-19 153.6 12.2 116 407-528 26-170 (343)
335 KOG0584 Serine/threonine prote 99.6 7E-16 1.5E-20 159.9 4.8 203 409-623 53-295 (632)
336 KOG0660 Mitogen-activated prot 99.6 2.4E-15 5.2E-20 146.6 8.1 117 407-528 33-177 (359)
337 cd05613 STKc_MSK1_N N-terminal 99.6 8E-15 1.7E-19 149.0 12.4 118 407-528 11-157 (290)
338 KOG0611 Predicted serine/threo 99.6 2.7E-15 5.8E-20 147.0 8.3 207 409-623 66-302 (668)
339 PHA03211 serine/threonine kina 99.6 4.9E-15 1.1E-19 158.7 11.2 111 407-527 180-311 (461)
340 cd05626 STKc_LATS2 Catalytic d 99.6 5E-15 1.1E-19 156.5 11.0 116 407-526 12-151 (381)
341 cd07842 STKc_CDK8_like Catalyt 99.6 1E-14 2.2E-19 150.0 13.0 117 407-527 11-163 (316)
342 cd07867 STKc_CDC2L6 Catalytic 99.6 3.4E-15 7.4E-20 153.8 9.1 115 407-527 12-163 (317)
343 cd07834 STKc_MAPK Catalytic do 99.6 6.1E-15 1.3E-19 152.8 11.1 217 407-630 11-297 (330)
344 cd05621 STKc_ROCK2 Catalytic d 99.6 4.9E-15 1.1E-19 155.7 10.5 116 407-527 54-193 (370)
345 cd05599 STKc_NDR_like Catalyti 99.6 3.2E-15 6.9E-20 157.2 9.0 117 407-527 12-152 (364)
346 cd05572 STKc_cGK_PKG Catalytic 99.6 6.4E-15 1.4E-19 147.2 10.7 118 407-528 4-145 (262)
347 cd05627 STKc_NDR2 Catalytic do 99.6 1.8E-14 4E-19 151.1 14.5 116 407-526 12-151 (360)
348 cd05598 STKc_LATS Catalytic do 99.6 1.3E-14 2.9E-19 153.1 13.2 114 407-524 12-149 (376)
349 cd07850 STKc_JNK Catalytic dom 99.6 9E-15 1.9E-19 153.0 11.7 115 407-528 27-170 (353)
350 PTZ00284 protein kinase; Provi 99.6 6.1E-15 1.3E-19 160.1 10.0 143 407-554 140-347 (467)
351 cd05580 STKc_PKA Catalytic dom 99.6 8.5E-15 1.8E-19 148.8 9.9 119 407-529 12-154 (290)
352 PHA02882 putative serine/threo 99.6 4.2E-15 9.2E-20 151.3 7.6 149 470-625 123-293 (294)
353 KOG4279 Serine/threonine prote 99.6 1.2E-14 2.7E-19 151.2 11.0 194 409-623 588-831 (1226)
354 KOG1024 Receptor-like protein 99.6 2E-15 4.3E-20 147.5 4.7 182 449-636 365-563 (563)
355 cd07875 STKc_JNK1 Catalytic do 99.6 8.1E-15 1.8E-19 154.0 9.7 115 407-528 35-178 (364)
356 cd06616 PKc_MKK4 Catalytic dom 99.6 7.7E-15 1.7E-19 148.9 8.9 200 407-624 15-267 (288)
357 KOG0597 Serine-threonine prote 99.5 1.2E-14 2.6E-19 148.4 9.4 118 408-530 14-154 (808)
358 cd07880 STKc_p38gamma_MAPK12 C 99.5 1.3E-14 2.9E-19 151.0 9.9 209 407-623 26-297 (343)
359 PTZ00024 cyclin-dependent prot 99.5 2E-14 4.3E-19 149.3 11.1 116 407-527 20-170 (335)
360 cd05629 STKc_NDR_like_fungal C 99.5 1E-14 2.2E-19 154.0 9.1 115 407-525 12-150 (377)
361 cd05577 STKc_GRK Catalytic dom 99.5 1.5E-14 3.2E-19 146.0 9.9 118 407-527 4-146 (277)
362 cd08222 STKc_Nek11 Catalytic d 99.5 1.6E-14 3.4E-19 144.2 9.6 151 449-623 79-256 (260)
363 cd05622 STKc_ROCK1 Catalytic d 99.5 1.8E-14 4E-19 151.4 10.4 116 407-527 54-193 (371)
364 cd07851 STKc_p38 Catalytic dom 99.5 1.7E-14 3.7E-19 150.3 9.9 209 407-623 26-297 (343)
365 cd05576 STKc_RPK118_like Catal 99.5 1E-14 2.2E-19 143.6 7.6 116 407-527 4-136 (237)
366 cd05123 STKc_AGC Catalytic dom 99.5 2.3E-14 5.1E-19 142.0 10.1 118 407-528 4-145 (250)
367 cd05625 STKc_LATS1 Catalytic d 99.5 1.9E-14 4.1E-19 152.3 9.6 115 407-525 12-150 (382)
368 KOG4645 MAPKKK (MAP kinase kin 99.5 1.5E-14 3.3E-19 160.7 9.1 117 409-529 1248-1387(1509)
369 cd07868 STKc_CDK8 Catalytic do 99.5 4.4E-14 9.6E-19 145.5 11.7 115 407-527 12-163 (317)
370 cd07857 STKc_MPK1 Catalytic do 99.5 3E-14 6.5E-19 147.8 10.4 116 407-527 11-156 (332)
371 cd07856 STKc_Sty1_Hog1 Catalyt 99.5 2.7E-14 5.8E-19 147.7 10.0 211 407-624 21-288 (328)
372 cd07866 STKc_BUR1 Catalytic do 99.5 4.2E-14 9.2E-19 145.1 11.4 117 407-527 19-166 (311)
373 KOG0032 Ca2+/calmodulin-depend 99.5 3.5E-14 7.6E-19 147.0 10.0 195 408-624 47-293 (382)
374 PLN03224 probable serine/threo 99.5 6E-14 1.3E-18 150.3 10.2 77 448-527 261-360 (507)
375 cd07879 STKc_p38delta_MAPK13 C 99.5 7.7E-14 1.7E-18 145.3 10.4 210 407-629 26-304 (342)
376 cd06653 STKc_MEKK3_like_1 Cata 99.5 1.2E-13 2.5E-18 138.4 10.2 116 407-526 13-156 (264)
377 cd05581 STKc_PDK1 Catalytic do 99.5 7.5E-14 1.6E-18 140.8 8.8 118 407-528 12-154 (280)
378 KOG0579 Ste20-like serine/thre 99.5 6.7E-14 1.4E-18 144.3 7.6 213 407-623 43-288 (1187)
379 KOG0983 Mitogen-activated prot 99.5 8.9E-14 1.9E-18 130.1 7.7 201 408-623 104-348 (391)
380 KOG0587 Traf2- and Nck-interac 99.5 3.6E-13 7.7E-18 144.7 12.2 193 409-623 32-281 (953)
381 KOG0596 Dual specificity; seri 99.5 2.2E-13 4.7E-18 139.2 9.7 194 407-623 372-626 (677)
382 cd07854 STKc_MAPK4_6 Catalytic 99.4 1.6E-13 3.4E-18 143.0 8.7 114 407-526 16-165 (342)
383 cd00180 PKc Catalytic domain o 99.4 4.1E-13 9E-18 128.6 10.9 118 408-528 5-145 (215)
384 smart00750 KIND kinase non-cat 99.4 5.5E-13 1.2E-17 124.6 11.4 151 457-631 1-172 (176)
385 KOG0033 Ca2+/calmodulin-depend 99.4 3E-14 6.5E-19 131.1 2.2 193 409-623 24-266 (355)
386 KOG4250 TANK binding protein k 99.4 5.9E-13 1.3E-17 140.3 11.8 121 407-530 24-178 (732)
387 KOG0694 Serine/threonine prote 99.4 2.9E-13 6.2E-18 142.2 9.3 114 408-526 380-518 (694)
388 KOG0616 cAMP-dependent protein 99.4 1.9E-13 4.2E-18 129.5 7.2 119 408-530 56-198 (355)
389 cd07877 STKc_p38alpha_MAPK14 C 99.4 4.5E-13 9.8E-18 139.7 10.8 116 407-528 28-172 (345)
390 KOG0586 Serine/threonine prote 99.4 2.7E-13 5.8E-18 140.8 8.9 207 409-623 69-305 (596)
391 PLN00181 protein SPA1-RELATED; 99.4 2.8E-13 6E-18 156.5 6.7 73 449-525 57-148 (793)
392 KOG1035 eIF-2alpha kinase GCN2 99.4 2.6E-13 5.6E-18 150.3 5.4 168 448-623 672-870 (1351)
393 PHA03210 serine/threonine kina 99.4 6.9E-13 1.5E-17 144.8 8.4 54 472-528 266-319 (501)
394 KOG0667 Dual-specificity tyros 99.4 1.4E-12 3.1E-17 136.9 9.3 118 408-530 198-345 (586)
395 KOG0662 Cyclin-dependent kinas 99.4 1.3E-12 2.8E-17 114.8 6.7 116 408-527 14-152 (292)
396 KOG1027 Serine/threonine prote 99.3 1.5E-12 3.3E-17 139.3 7.4 196 399-622 509-765 (903)
397 KOG0604 MAP kinase-activated p 99.3 1.7E-12 3.7E-17 123.1 7.0 76 449-527 136-215 (400)
398 KOG0666 Cyclin C-dependent kin 99.3 4.4E-13 9.4E-18 127.7 2.9 117 408-528 36-188 (438)
399 KOG0984 Mitogen-activated prot 99.3 1.9E-12 4E-17 116.6 6.1 117 409-528 59-201 (282)
400 cd05147 RIO1_euk RIO kinase fa 99.3 2E-12 4.4E-17 121.7 6.7 116 407-526 8-167 (190)
401 KOG0603 Ribosomal protein S6 k 99.3 1.7E-12 3.7E-17 135.7 6.5 149 448-623 392-562 (612)
402 KOG1151 Tousled-like protein k 99.3 4E-12 8.8E-17 126.3 8.8 123 407-531 474-628 (775)
403 KOG0986 G protein-coupled rece 99.3 1.5E-12 3.2E-17 130.1 5.8 134 394-530 175-341 (591)
404 KOG0605 NDR and related serine 99.3 3.1E-12 6.7E-17 130.9 7.6 117 407-527 152-292 (550)
405 KOG1006 Mitogen-activated prot 99.3 5.2E-13 1.1E-17 124.6 1.6 200 407-623 75-326 (361)
406 KOG1345 Serine/threonine kinas 99.3 2.4E-11 5.2E-16 113.9 12.5 201 409-628 37-288 (378)
407 KOG4717 Serine/threonine prote 99.3 6.1E-12 1.3E-16 127.3 9.0 191 419-623 42-269 (864)
408 KOG0669 Cyclin T-dependent kin 99.3 3.7E-12 8E-17 117.9 6.2 77 448-528 100-176 (376)
409 PRK09188 serine/threonine prot 99.3 6.2E-12 1.4E-16 129.2 8.7 111 407-528 29-164 (365)
410 cd05610 STKc_MASTL Catalytic d 99.3 7.8E-12 1.7E-16 141.0 9.6 118 407-528 15-156 (669)
411 cd05145 RIO1_like RIO kinase f 99.3 1.7E-11 3.6E-16 116.0 8.7 117 407-528 8-169 (190)
412 KOG4236 Serine/threonine prote 99.2 6.9E-12 1.5E-16 127.2 5.0 118 409-530 577-721 (888)
413 KOG0532 Leucine-rich repeat (L 99.2 6.8E-13 1.5E-17 136.1 -2.5 133 74-230 73-205 (722)
414 KOG0610 Putative serine/threon 99.2 2E-11 4.4E-16 121.1 7.8 116 408-526 89-229 (459)
415 KOG0195 Integrin-linked kinase 99.2 2.1E-12 4.5E-17 120.8 0.1 202 409-629 203-447 (448)
416 KOG1023 Natriuretic peptide re 99.2 4.9E-11 1.1E-15 124.9 9.0 167 449-629 24-225 (484)
417 KOG0612 Rho-associated, coiled 99.2 2.9E-11 6.3E-16 133.4 6.9 116 407-527 86-226 (1317)
418 PLN03150 hypothetical protein; 99.2 7.4E-11 1.6E-15 131.3 9.6 108 77-202 419-527 (623)
419 KOG0532 Leucine-rich repeat (L 99.2 1.2E-12 2.5E-17 134.4 -4.9 170 54-231 77-251 (722)
420 KOG0664 Nemo-like MAPK-related 99.1 4.9E-11 1.1E-15 111.7 5.1 119 407-530 64-210 (449)
421 COG4886 Leucine-rich repeat (L 99.1 9E-11 2E-15 124.7 7.9 193 80-316 97-295 (394)
422 KOG0607 MAP kinase-interacting 99.1 5.7E-11 1.2E-15 113.8 5.2 113 409-525 91-228 (463)
423 KOG0576 Mitogen-activated prot 99.1 4.6E-11 9.9E-16 124.9 4.4 117 408-528 27-164 (829)
424 smart00221 STYKc Protein kinas 99.1 2.9E-10 6.4E-15 110.3 9.1 120 407-529 10-151 (225)
425 smart00090 RIO RIO-like kinase 99.1 3.2E-10 6.9E-15 110.6 8.8 115 407-526 39-198 (237)
426 COG4886 Leucine-rich repeat (L 99.0 2.1E-10 4.6E-15 121.9 6.5 195 56-270 97-297 (394)
427 KOG0614 cGMP-dependent protein 99.0 2E-10 4.4E-15 116.4 5.6 121 406-530 430-574 (732)
428 PF14580 LRR_9: Leucine-rich r 99.0 1.4E-10 3E-15 106.0 3.5 86 72-162 15-102 (175)
429 PF14580 LRR_9: Leucine-rich r 99.0 2.2E-10 4.8E-15 104.7 4.6 105 53-162 20-127 (175)
430 cd05144 RIO2_C RIO kinase fami 99.0 6.6E-10 1.4E-14 105.9 7.7 111 407-527 26-176 (198)
431 KOG1259 Nischarin, modulator o 99.0 7.2E-11 1.6E-15 112.2 1.1 170 53-228 183-366 (490)
432 PRK12274 serine/threonine prot 98.9 2.7E-09 5.9E-14 99.7 7.1 109 407-527 13-143 (218)
433 PRK14879 serine/threonine prot 98.9 2.7E-09 5.8E-14 102.8 7.0 109 407-525 7-143 (211)
434 KOG0665 Jun-N-terminal kinase 98.9 1.6E-09 3.5E-14 104.3 5.1 116 447-570 96-215 (369)
435 KOG3207 Beta-tubulin folding c 98.9 3.9E-10 8.6E-15 112.7 0.8 208 74-313 119-341 (505)
436 KOG0690 Serine/threonine prote 98.9 3.1E-09 6.6E-14 102.3 6.0 73 449-525 245-317 (516)
437 TIGR03724 arch_bud32 Kae1-asso 98.8 4.2E-09 9.1E-14 100.5 6.6 106 407-525 5-138 (199)
438 cd05119 RIO RIO kinase family, 98.8 5.9E-09 1.3E-13 98.3 7.3 115 407-527 8-165 (187)
439 KOG1259 Nischarin, modulator o 98.8 3.2E-10 7E-15 107.8 -1.4 136 90-230 274-415 (490)
440 PF13855 LRR_8: Leucine rich r 98.8 3.1E-09 6.8E-14 79.8 3.4 59 101-159 2-60 (61)
441 KOG3207 Beta-tubulin folding c 98.8 7.4E-10 1.6E-14 110.8 -0.1 204 98-337 119-341 (505)
442 PF13855 LRR_8: Leucine rich r 98.8 3.4E-09 7.3E-14 79.6 3.3 61 76-136 1-61 (61)
443 KOG1909 Ran GTPase-activating 98.8 7E-10 1.5E-14 108.1 -0.9 237 52-310 30-310 (382)
444 PRK09605 bifunctional UGMP fam 98.8 7E-09 1.5E-13 114.3 6.4 65 449-526 413-477 (535)
445 KOG0531 Protein phosphatase 1, 98.8 6.5E-10 1.4E-14 118.4 -1.7 124 100-228 72-200 (414)
446 KOG1909 Ran GTPase-activating 98.8 1.9E-09 4.2E-14 105.1 1.4 111 249-359 156-283 (382)
447 KOG0531 Protein phosphatase 1, 98.8 7.7E-10 1.7E-14 117.9 -1.7 147 74-227 70-221 (414)
448 PRK10345 hypothetical protein; 98.8 1.7E-08 3.8E-13 96.0 7.3 117 400-525 3-159 (210)
449 KOG0668 Casein kinase II, alph 98.7 2.7E-08 5.8E-13 91.5 7.4 110 411-530 53-187 (338)
450 KOG0608 Warts/lats-like serine 98.7 6.6E-09 1.4E-13 108.2 3.4 71 448-523 705-776 (1034)
451 KOG4658 Apoptotic ATPase [Sign 98.7 1.5E-08 3.3E-13 115.4 5.5 267 52-329 545-826 (889)
452 PRK10359 lipopolysaccharide co 98.7 3.8E-08 8.2E-13 94.1 7.0 107 407-527 42-185 (232)
453 KOG4658 Apoptotic ATPase [Sign 98.7 2.5E-08 5.3E-13 113.8 6.7 84 76-161 523-608 (889)
454 KOG0671 LAMMER dual specificit 98.7 2.2E-08 4.8E-13 98.9 5.4 162 458-624 176-406 (415)
455 KOG0695 Serine/threonine prote 98.7 4.1E-08 9E-13 94.9 6.7 73 449-525 328-400 (593)
456 TIGR01982 UbiB 2-polyprenylphe 98.7 3.9E-08 8.6E-13 104.7 7.1 75 449-529 235-310 (437)
457 KOG0696 Serine/threonine prote 98.7 3.6E-08 7.9E-13 97.9 6.2 74 448-525 426-499 (683)
458 PF08263 LRRNT_2: Leucine rich 98.6 2.9E-08 6.2E-13 68.3 3.7 40 8-48 2-43 (43)
459 cd05120 APH_ChoK_like Aminogly 98.6 1.3E-07 2.9E-12 85.3 8.9 107 408-525 10-138 (155)
460 KOG1164 Casein kinase (serine/ 98.6 3.2E-07 6.9E-12 94.5 11.8 115 407-524 29-175 (322)
461 PRK01723 3-deoxy-D-manno-octul 98.5 2.3E-07 4.9E-12 90.8 7.8 69 449-526 123-192 (239)
462 KOG0670 U4/U6-associated splic 98.4 8.1E-07 1.7E-11 91.1 9.3 118 409-531 445-592 (752)
463 KOG1166 Mitotic checkpoint ser 98.4 3.4E-07 7.3E-12 103.3 6.9 116 407-526 709-851 (974)
464 KOG1163 Casein kinase (serine/ 98.4 5.4E-07 1.2E-11 83.7 5.7 117 407-529 26-167 (341)
465 KOG1167 Serine/threonine prote 98.4 4.1E-07 8.9E-12 91.2 4.9 108 408-524 48-181 (418)
466 KOG1165 Casein kinase (serine/ 98.3 1.6E-06 3.4E-11 84.4 8.3 116 409-530 41-183 (449)
467 KOG0590 Checkpoint kinase and 98.3 7.8E-07 1.7E-11 98.1 5.8 72 450-526 399-470 (601)
468 KOG1290 Serine/threonine prote 98.2 3.2E-06 7E-11 86.3 6.8 99 409-511 91-223 (590)
469 KOG1152 Signal transduction se 98.2 5.6E-06 1.2E-10 86.2 8.1 117 408-528 573-722 (772)
470 cd05151 ChoK Choline Kinase (C 98.1 5.5E-06 1.2E-10 76.6 7.0 105 409-525 11-136 (170)
471 KOG1859 Leucine-rich repeat pr 98.1 4E-08 8.6E-13 104.2 -8.4 120 53-178 165-291 (1096)
472 KOG2982 Uncharacterized conser 98.1 7.8E-07 1.7E-11 85.2 0.2 88 74-161 69-159 (418)
473 KOG1859 Leucine-rich repeat pr 98.0 8.1E-08 1.8E-12 101.9 -8.5 122 77-202 165-291 (1096)
474 KOG2982 Uncharacterized conser 97.9 7.3E-06 1.6E-10 78.7 3.5 82 273-354 198-287 (418)
475 KOG4158 BRPK/PTEN-induced prot 97.9 2.7E-05 5.9E-10 77.7 7.5 50 472-524 340-393 (598)
476 PRK04750 ubiB putative ubiquin 97.9 2.2E-05 4.7E-10 85.1 7.4 76 449-529 238-317 (537)
477 PF12799 LRR_4: Leucine Rich r 97.8 1.6E-05 3.5E-10 54.6 3.1 36 101-137 2-37 (44)
478 KOG4579 Leucine-rich repeat (L 97.8 2.1E-06 4.6E-11 72.9 -1.8 86 272-360 51-137 (177)
479 COG0515 SPS1 Serine/threonine 97.8 1.8E-05 4E-10 81.0 3.8 78 448-528 74-154 (384)
480 PF12799 LRR_4: Leucine Rich r 97.7 2.3E-05 5.1E-10 53.9 2.8 38 76-114 1-38 (44)
481 PF01163 RIO1: RIO1 family; I 97.7 5E-05 1.1E-09 70.8 5.5 72 449-526 83-156 (188)
482 KOG1644 U2-associated snRNP A' 97.7 6.8E-05 1.5E-09 68.3 5.8 58 77-136 43-100 (233)
483 cd05146 RIO3_euk RIO kinase fa 97.7 2.8E-05 6.1E-10 72.8 3.5 73 449-526 101-174 (197)
484 KOG1240 Protein kinase contain 97.7 4E-05 8.8E-10 85.9 5.3 205 408-626 35-293 (1431)
485 KOG1266 Protein kinase [Signal 97.7 2.3E-05 5E-10 76.4 3.0 69 449-518 149-220 (458)
486 KOG4579 Leucine-rich repeat (L 97.7 3.8E-06 8.2E-11 71.5 -2.1 107 54-164 29-139 (177)
487 KOG1033 eIF-2alpha kinase PEK/ 97.6 2.5E-05 5.5E-10 81.1 2.6 76 448-529 332-409 (516)
488 COG3642 Mn2+-dependent serine/ 97.6 3.2E-05 6.9E-10 70.1 2.5 65 449-525 76-140 (204)
489 PRK15386 type III secretion pr 97.6 0.00034 7.4E-09 72.2 9.4 88 74-174 50-140 (426)
490 cd05154 ACAD10_11_like Acyl-Co 97.5 0.00038 8.2E-09 67.3 8.7 115 409-525 11-206 (223)
491 KOG1644 U2-associated snRNP A' 97.5 0.0002 4.3E-09 65.4 5.5 98 101-200 43-150 (233)
492 COG5238 RNA1 Ran GTPase-activa 97.5 7.7E-05 1.7E-09 70.9 2.9 84 144-227 26-133 (388)
493 KOG2120 SCF ubiquitin ligase, 97.4 9.2E-06 2E-10 78.0 -3.9 151 76-226 185-350 (419)
494 KOG2739 Leucine-rich acidic nu 97.4 0.00012 2.5E-09 69.8 3.3 87 72-162 39-130 (260)
495 COG5238 RNA1 Ran GTPase-activa 97.4 0.00018 3.9E-09 68.5 4.3 195 165-408 91-317 (388)
496 PRK15386 type III secretion pr 97.4 0.0007 1.5E-08 70.0 8.8 16 122-137 50-65 (426)
497 PRK15123 lipopolysaccharide co 97.3 0.00018 3.8E-09 71.3 3.5 74 449-525 112-194 (268)
498 KOG0603 Ribosomal protein S6 k 97.1 0.00076 1.6E-08 71.9 6.3 79 447-529 72-150 (612)
499 PF14531 Kinase-like: Kinase-l 97.1 0.00041 9E-09 68.7 3.9 55 470-527 142-196 (288)
500 KOG3665 ZYG-1-like serine/thre 97.1 0.00019 4.1E-09 80.4 1.3 84 74-159 146-231 (699)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-69 Score=640.26 Aligned_cols=606 Identities=31% Similarity=0.479 Sum_probs=393.5
Q ss_pred hhHHHHHHHHHhcCCCCCCcccccCCCCCCCCcCccceecCCCCCcEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCc
Q 041082 8 NHLSFQVFVLKGHVTDDPTNFLAKNWNTSSTVCHWTGVSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNW 87 (639)
Q Consensus 8 ~~~~~~ll~~k~~~~~~~~~~l~~~w~~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~ 87 (639)
..+..||++||+++ .+|.+.+.+ |...+++|.|.||+|+. ..+|+.|+|+++.++|.+|..|..+++|++|+|++|+
T Consensus 28 ~~~~~~l~~~~~~~-~~~~~~~~~-w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~ 104 (968)
T PLN00113 28 AEELELLLSFKSSI-NDPLKYLSN-WNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQ 104 (968)
T ss_pred HHHHHHHHHHHHhC-CCCcccCCC-CCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCc
Confidence 36889999999998 478777877 98888999999999985 3589999999999988888888888888888888888
Q ss_pred CCccCCcccc-CCcccceeeccCCcCC----------------------CCCCccccCCCCCcEEecccccCccccCccc
Q 041082 88 FSGSIPSSIF-NMSSLLSIYFNNNTLF----------------------GEIPEELGNLAELETLWLQNNFLTGTIHSSI 144 (639)
Q Consensus 88 l~~~~p~~~~-~l~~L~~L~L~~N~l~----------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 144 (639)
+.+.+|..+. .+++|++|+|++|.++ +.+|..++++++|++|+|++|.+.+.+|..+
T Consensus 105 ~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 105 LSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred cCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 8877776654 5555555555555444 4455556666666666666666666666666
Q ss_pred cCCCCCCEEecCCCCCCCC------CCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCE
Q 041082 145 FNLSSLSDLDLSHNNLTDV------QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKR 218 (639)
Q Consensus 145 ~~l~~L~~L~Ls~N~l~~~------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 218 (639)
.++++|++|+|++|.+++. .+++|+.|+|++|++++.+|..+.++++|+.|++++|.+.+.+|..|+++++|++
T Consensus 185 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 264 (968)
T PLN00113 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQY 264 (968)
T ss_pred hhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCE
Confidence 6666666666666665431 2445555555555555555555555555555555555554444444444444444
Q ss_pred EEccCCCCC------------------------CCCCcchhhccccCCcchhh--------------h------------
Q 041082 219 LNLYDNYLT------------------------SSTPELSFLYSLSNCKYLEQ--------------S------------ 248 (639)
Q Consensus 219 L~Ls~N~l~------------------------~~~~~~~~~~~l~~l~~l~~--------------~------------ 248 (639)
|++++|.++ +..|.. +..+.++..+.. .
T Consensus 265 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n 342 (968)
T PLN00113 265 LFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPEL--VIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSN 342 (968)
T ss_pred EECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChh--HcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCC
Confidence 444444443 322210 011111111110 0
Q ss_pred ------------ccCccEEEeecCccccccchhh------------------------cCCCCCCEEECCCCCCCccccc
Q 041082 249 ------------SQSLEVFSMFNCNISGGILEEI------------------------SNLTNLTAIYLAGNKLNGSIPI 292 (639)
Q Consensus 249 ------------~~~l~~l~l~~n~l~~~~~~~~------------------------~~l~~L~~L~Ls~N~l~~~~p~ 292 (639)
..+|+.+++++|++.+.+|..+ ..+++|+.|++++|++++.+|.
T Consensus 343 ~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~ 422 (968)
T PLN00113 343 KFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPS 422 (968)
T ss_pred CCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECCh
Confidence 1234445555444443333222 2222333333333333333332
Q ss_pred cccCCcC-----------------------------------------------CcEEEccCCcCCCCCchhhcCCCCCc
Q 041082 293 TLCKLQK-----------------------------------------------LQLLSFVDNKLEGPIPYEFCRLASLY 325 (639)
Q Consensus 293 ~~~~l~~-----------------------------------------------L~~L~l~~N~l~~~~p~~~~~l~~L~ 325 (639)
.+..++. |+.|++++|++.+.+|..|..+++|+
T Consensus 423 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~ 502 (968)
T PLN00113 423 EFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELM 502 (968)
T ss_pred hHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccC
Confidence 2222222 22333333334444444555556666
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCCcEEEcccCCCCCCCccccccccccccccccCCC
Q 041082 326 ELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNN 405 (639)
Q Consensus 326 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~ 405 (639)
.|++++|.+++.+|..+..+++|++|++++|.+++.+|..|..+++|+.|++++|++++.+|..+..+..|+.+++++|+
T Consensus 503 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~ 582 (968)
T PLN00113 503 QLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582 (968)
T ss_pred EEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc
Confidence 66666666666667777777777777777777777777777777778888888888877777777777777777777776
Q ss_pred CCC-----------------------------------------------------------------------------
Q 041082 406 FSG----------------------------------------------------------------------------- 408 (639)
Q Consensus 406 l~g----------------------------------------------------------------------------- 408 (639)
+.|
T Consensus 583 l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (968)
T PLN00113 583 LHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKR 662 (968)
T ss_pred ceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 542
Q ss_pred ----------------------------------------cCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHH-
Q 041082 409 ----------------------------------------FGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMM- 446 (639)
Q Consensus 409 ----------------------------------------~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~- 446 (639)
+|.||++.. .++..+|+|.+....... ..+++.+
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~~~~l~ 738 (968)
T PLN00113 663 VENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMG 738 (968)
T ss_pred cccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc----HHHHHHHh
Confidence 344666654 356677777765322111 1122221
Q ss_pred -------------------HhhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCce
Q 041082 447 -------------------KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNV 507 (639)
Q Consensus 447 -------------------~~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~ni 507 (639)
..+|||||++|+|.++++. ++|.++.+||.++|+|++|||+.+.++|+|||+||+||
T Consensus 739 ~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Ni 814 (968)
T PLN00113 739 KLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKI 814 (968)
T ss_pred hCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhE
Confidence 2379999999999999863 89999999999999999999998899999999999999
Q ss_pred eecCCcceeeccccccccccccCC-------Ccc----ccccccccccc--c-------CCCCCCCccCCCccchHHHHH
Q 041082 508 LLGNNMVAHLSDFGMAKLLLKEDQ-------SFT----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVN 567 (639)
Q Consensus 508 ll~~~~~~~i~dfgla~~~~~~~~-------~~~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~ 567 (639)
+++.++.+++. ||.+.....+.. ..+ ....+.++||| | ||+.|.+..+.....+.+|++
T Consensus 815 l~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~ 893 (968)
T PLN00113 815 IIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWAR 893 (968)
T ss_pred EECCCCceEEE-eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHH
Confidence 99999998875 665543322110 011 11234489999 7 999998776666778999998
Q ss_pred hhCCCC-cceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 568 DLLPIS-VMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 568 ~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
...... ..+.+|+.+.... ....+++.++.+++.+|++.+|++||+|.||+++|+++...
T Consensus 894 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 894 YCYSDCHLDMWIDPSIRGDV----SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HhcCccchhheeCccccCCC----CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 765443 5567787765421 23356788899999999999999999999999999988653
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=324.96 Aligned_cols=219 Identities=36% Similarity=0.516 Sum_probs=179.7
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHH---------------------HhhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMM---------------------KKLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~~l~~ 465 (639)
.|||.||+|.+.+|..+|||+++....+..++|..|+..+ ..||||||++|+|.++|+.
T Consensus 86 Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~ 165 (361)
T KOG1187|consen 86 GGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHG 165 (361)
T ss_pred CCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCC
Confidence 3689999999999999999988754432145698888873 4689999999999999998
Q ss_pred CCc-cCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc-cCCCc----------
Q 041082 466 SNY-ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK-EDQSF---------- 533 (639)
Q Consensus 466 ~~~-~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~-~~~~~---------- 533 (639)
... .++|.+|++||.|+|+||+|||+.|.|+|+||||||+|||||++++|||+|||+|+.... .....
T Consensus 166 ~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~ 245 (361)
T KOG1187|consen 166 KKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYL 245 (361)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccC
Confidence 555 899999999999999999999999999999999999999999999999999999987654 22110
Q ss_pred -cc----cccccccccc--c-------CCCCCCCccC-CCccchHHHHHhhCCC-CcceeeeccccccccccccchHHHH
Q 041082 534 -TQ----NTNTCHHRIY--G-------TRRNPQMNFF-SGEMTLKSWVNDLLPI-SVMEVVDVNLLSMEDKYFTTKKQCL 597 (639)
Q Consensus 534 -~~----~~~~~~~dvy--G-------tg~~p~~~~~-~~~~~l~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~ 597 (639)
+. ...+.|+||| | ||++|.+... .+...+++|+...+.+ ...+++||++.... ....+++
T Consensus 246 ~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~----~~~~~~~ 321 (361)
T KOG1187|consen 246 APEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGE----YPDEKEV 321 (361)
T ss_pred ChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCC----CChHHHH
Confidence 11 1233499999 7 9998888653 4456799999877766 58999999987311 1112789
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 598 SFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 598 ~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
.+++++|++|++.+|++||+|.||+++|+.+.
T Consensus 322 ~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 322 KKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 99999999999999999999999999996654
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5e-37 Score=362.50 Aligned_cols=337 Identities=33% Similarity=0.513 Sum_probs=263.4
Q ss_pred CcEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEec
Q 041082 52 YRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWL 131 (639)
Q Consensus 52 ~~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 131 (639)
.+++.|+|++|.+++.+|..|+++++|++|+|++|.+.+.+|..|+++++|+.|++++|.+.+.+|..+.++++|++|+|
T Consensus 212 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 291 (968)
T PLN00113 212 KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDL 291 (968)
T ss_pred CCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEEC
Confidence 36778888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccccCccccCccccCCCCCCEEecCCCCCCCC------CCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCccc
Q 041082 132 QNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDV------QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDL 205 (639)
Q Consensus 132 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 205 (639)
++|.+.+.+|..+.++++|+.|++++|.+++. .+++|+.|+|++|.+++.+|..+..+++|+.|++++|.+.+.
T Consensus 292 s~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~ 371 (968)
T PLN00113 292 SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGE 371 (968)
T ss_pred cCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEee
Confidence 88888888888788888888888888877642 356677777777777777776666666677777666666665
Q ss_pred CccccCCCCCCCEEEccCCCCCCCCCcc-h---------------------hhccccCCcchhh--------------hc
Q 041082 206 IPNTFGNLINLKRLNLYDNYLTSSTPEL-S---------------------FLYSLSNCKYLEQ--------------SS 249 (639)
Q Consensus 206 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~---------------------~~~~l~~l~~l~~--------------~~ 249 (639)
+|..+..+++|+.|++++|.+.+..|.. . .+..+..+..+.. ..
T Consensus 372 ~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 451 (968)
T PLN00113 372 IPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDM 451 (968)
T ss_pred CChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccC
Confidence 5555555555555555555544332210 0 0111122211111 13
Q ss_pred cCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCccccccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEEC
Q 041082 250 QSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDL 329 (639)
Q Consensus 250 ~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 329 (639)
.+|+.|++++|.+.+.+|..+ ..++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++
T Consensus 452 ~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 530 (968)
T PLN00113 452 PSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDL 530 (968)
T ss_pred CCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEEC
Confidence 456777777777777666654 3578888999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCCcEEEcccCCCCCCCccc
Q 041082 330 SGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLE 389 (639)
Q Consensus 330 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 389 (639)
++|.+++.+|..|..+++|+.|++++|++.+.+|..+..++.|+.+++++|++.+.+|..
T Consensus 531 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 590 (968)
T PLN00113 531 SHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590 (968)
T ss_pred CCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc
Confidence 999999999999999999999999999999999999999999999999999999988853
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=307.86 Aligned_cols=342 Identities=24% Similarity=0.226 Sum_probs=225.5
Q ss_pred EEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEeccc
Q 041082 54 VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQN 133 (639)
Q Consensus 54 v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (639)
+..||+++|.++..-+..|-++++||.+++.+|.++ .||.......+|+.|+|.+|.|...-.+++..++.|+.|||+.
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 344555555555544455555555555555555555 4555444445555555555555555555555555555555555
Q ss_pred ccCccccCccccCCCCCCEEecCCCCCCCCC------CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCc
Q 041082 134 NFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ------IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIP 207 (639)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 207 (639)
|.|+.+.-.+|..-.++++|+|++|.|+.+. +.+|..|.|+.|+++...+..|.++++|+.|+|..|++.-...
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred chhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh
Confidence 5555433334444455555555555555432 3455555555555554444445555555555555555543333
Q ss_pred cccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCC
Q 041082 208 NTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLN 287 (639)
Q Consensus 208 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 287 (639)
-.|..|++|+.|.|..|.+.....+.+ +. ..++++++++.|+++..--..+.+++.|+.|+||+|.|.
T Consensus 239 ltFqgL~Sl~nlklqrN~I~kL~DG~F--y~----------l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ 306 (873)
T KOG4194|consen 239 LTFQGLPSLQNLKLQRNDISKLDDGAF--YG----------LEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQ 306 (873)
T ss_pred hhhcCchhhhhhhhhhcCcccccCcce--ee----------ecccceeecccchhhhhhcccccccchhhhhccchhhhh
Confidence 445555555555555555544322211 11 346778888888887766777788888888888888888
Q ss_pred ccccccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchh---
Q 041082 288 GSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPS--- 364 (639)
Q Consensus 288 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--- 364 (639)
..-+.++...++|++|+|++|+|+...+.+|..+.+|+.|+|++|.++......|..+++|+.|||++|.+...+.+
T Consensus 307 rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~ 386 (873)
T KOG4194|consen 307 RIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAV 386 (873)
T ss_pred eeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchh
Confidence 77778888888888888888888888888888888888888888888877777888888888888888888776654
Q ss_pred hhhcCCCCcEEEcccCCCCCCCccccccccccccccccCCCCCC
Q 041082 365 TLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSG 408 (639)
Q Consensus 365 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 408 (639)
.|..++.|+.|.+.+|++......+|..+..|+.|||.+|.|..
T Consensus 387 ~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 387 AFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS 430 (873)
T ss_pred hhccchhhhheeecCceeeecchhhhccCcccceecCCCCccee
Confidence 46678888888888888877777788888888888888887754
No 5
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.98 E-value=7.6e-34 Score=287.33 Aligned_cols=340 Identities=25% Similarity=0.267 Sum_probs=302.7
Q ss_pred cEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecc
Q 041082 53 RVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQ 132 (639)
Q Consensus 53 ~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 132 (639)
+++.+++..|.++ .+|...+...+|+.|+|.+|.|+..-.+++..++.|+.||||.|.|+...-.+|..-.++++|+|+
T Consensus 103 nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La 181 (873)
T KOG4194|consen 103 NLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLA 181 (873)
T ss_pred cceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeec
Confidence 5778888888887 678777777789999999999998888999999999999999999987777789888999999999
Q ss_pred cccCccccCccccCCCCCCEEecCCCCCCCCC------CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccC
Q 041082 133 NNFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ------IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLI 206 (639)
Q Consensus 133 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 206 (639)
+|.|+..-.+.|.++.+|..|.|+.|+|+.++ ++.|+.|+|..|++.-.--..|..+.+|+.|.|..|.+..+.
T Consensus 182 ~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~ 261 (873)
T KOG4194|consen 182 SNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLD 261 (873)
T ss_pred cccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCccccc
Confidence 99999888889999999999999999999863 899999999999997544567889999999999999999999
Q ss_pred ccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCC
Q 041082 207 PNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKL 286 (639)
Q Consensus 207 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 286 (639)
...|-.+.++++|+|..|++......+- + ++ ..|+.|++++|.+....++.++-.++|+.|+|++|+|
T Consensus 262 DG~Fy~l~kme~l~L~~N~l~~vn~g~l--f---gL-------t~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i 329 (873)
T KOG4194|consen 262 DGAFYGLEKMEHLNLETNRLQAVNEGWL--F---GL-------TSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRI 329 (873)
T ss_pred Ccceeeecccceeecccchhhhhhcccc--c---cc-------chhhhhccchhhhheeecchhhhcccceeEecccccc
Confidence 9999999999999999999987654432 1 22 3678899999999998899999999999999999999
Q ss_pred CccccccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCC---ccccCCCCCCEEeCCCCcCcccch
Q 041082 287 NGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIP---TCFGNQTSLRILSLDSNKLISIIP 363 (639)
Q Consensus 287 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p 363 (639)
+...+..|..+..|+.|+|++|.+...-..+|..+++|+.|||++|.+++.+. ..|.++++|+.|.+.+|++..+.-
T Consensus 330 ~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~k 409 (873)
T KOG4194|consen 330 TRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPK 409 (873)
T ss_pred ccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecch
Confidence 98888999999999999999999998888899999999999999999998764 457889999999999999999999
Q ss_pred hhhhcCCCCcEEEcccCCCCCCCccccccccccccccccCCCC
Q 041082 364 STLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNF 406 (639)
Q Consensus 364 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l 406 (639)
..|.++..|+.|||.+|.+...-|.+|..+ .|..|-+..-.|
T Consensus 410 rAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 410 RAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred hhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 999999999999999999999889999988 777776655443
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=2e-32 Score=278.53 Aligned_cols=343 Identities=28% Similarity=0.386 Sum_probs=269.8
Q ss_pred cEEEEEeCCCCCc-ccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEec
Q 041082 53 RVTTLNISGLSLT-STIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWL 131 (639)
Q Consensus 53 ~v~~L~L~~~~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 131 (639)
-|...|+++|.++ +..|.+...++.++.|.|....+. .+|++++.+.+|++|.+++|++. .+-.+++.|+.|+.+.+
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 3677888999988 577888888999999999888887 78999999999999999999886 35567888889999999
Q ss_pred ccccCc-cccCccccCCCCCCEEecCCCCCCCCC-----CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCccc
Q 041082 132 QNNFLT-GTIHSSIFNLSSLSDLDLSHNNLTDVQ-----IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDL 205 (639)
Q Consensus 132 ~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~-----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 205 (639)
.+|++. .-+|..++.+..|+.||||+|+++..+ ..++-.|+||+|+|.....+.|.+++.|-.||||+|++..+
T Consensus 86 R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~L 165 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEML 165 (1255)
T ss_pred hccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhc
Confidence 998884 346778888999999999999988754 45778899999999855445666888899999999998765
Q ss_pred CccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchh---------------hhccCccEEEeecCccccccchhh
Q 041082 206 IPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLE---------------QSSQSLEVFSMFNCNISGGILEEI 270 (639)
Q Consensus 206 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~---------------~~~~~l~~l~l~~n~l~~~~~~~~ 270 (639)
.| .+..+..|++|+|++|.+.... +..++++..+..|. ....+|..++++.|++. ..|+.+
T Consensus 166 PP-Q~RRL~~LqtL~Ls~NPL~hfQ--LrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecl 241 (1255)
T KOG0444|consen 166 PP-QIRRLSMLQTLKLSNNPLNHFQ--LRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECL 241 (1255)
T ss_pred CH-HHHHHhhhhhhhcCCChhhHHH--HhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHH
Confidence 44 5778888999999998765310 01111222222111 11345667788888887 478888
Q ss_pred cCCCCCCEEECCCCCCCccccccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcc-cCCccccCCCCCC
Q 041082 271 SNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSG-SIPTCFGNQTSLR 349 (639)
Q Consensus 271 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~ 349 (639)
..+++|+.|+||+|.|+ .+........+|++|+++.|+++ .+|.++|.++.|+.|.+.+|+++- -+|..++.+.+|+
T Consensus 242 y~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Le 319 (1255)
T KOG0444|consen 242 YKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLE 319 (1255)
T ss_pred hhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhH
Confidence 88899999999999887 44555667788889999999987 678899999999999999998763 3688889999999
Q ss_pred EEeCCCCcCcccchhhhhcCCCCcEEEcccCCCCCCCccccccccccccccccCCC
Q 041082 350 ILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNN 405 (639)
Q Consensus 350 ~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~ 405 (639)
++..++|.+. ..|..++.+..|+.|.|++|++. .+|..+--++.|..||+..|+
T Consensus 320 vf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 320 VFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred HHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 8888877764 57888999999999999999875 478888888889999998885
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.95 E-value=4.2e-31 Score=256.76 Aligned_cols=341 Identities=29% Similarity=0.437 Sum_probs=225.8
Q ss_pred EEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEeccc
Q 041082 54 VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQN 133 (639)
Q Consensus 54 v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (639)
+..++..+|+++ .+|++++++.+|..|++.+|++.. +|...-+|+.|++||..+|-+ +.+|++++.|.+|.-|+|..
T Consensus 139 l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 139 LEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLL-ETLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhh-hcCChhhcchhhhHHHHhhh
Confidence 444556666665 456666677777777777777764 344444477777777777765 45677778888888888888
Q ss_pred ccCccccCccccCCCCCCEEecCCCCCCCC------CCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCc
Q 041082 134 NFLTGTIHSSIFNLSSLSDLDLSHNNLTDV------QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIP 207 (639)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 207 (639)
|++. ..| +|.++..|++|+++.|.|+.+ .++.+..|||.+|++. ..|..+.-+.+|+.||+|+|.+++. |
T Consensus 216 Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~L-p 291 (565)
T KOG0472|consen 216 NKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSL-P 291 (565)
T ss_pred cccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccC-C
Confidence 8876 455 677788888888888877764 3778888888888887 6788888888888889988888876 4
Q ss_pred cccCCCCCCCEEEccCCCCCCCCCc------chhhc---------------------------------cccCCcchhhh
Q 041082 208 NTFGNLINLKRLNLYDNYLTSSTPE------LSFLY---------------------------------SLSNCKYLEQS 248 (639)
Q Consensus 208 ~~~~~l~~L~~L~Ls~N~l~~~~~~------~~~~~---------------------------------~l~~l~~l~~~ 248 (639)
..++++ +|+.|.+.+|.+..+-.+ ...+. .+.+.+.+...
T Consensus 292 ~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s 370 (565)
T KOG0472|consen 292 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVS 370 (565)
T ss_pred cccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccc
Confidence 568888 888888888876421100 00000 00000000000
Q ss_pred ----------------ccCccEEEeecCccccccchhhcCCCCCC-EEECCCCCCCccccccccCCcCCcEEEccCCcCC
Q 041082 249 ----------------SQSLEVFSMFNCNISGGILEEISNLTNLT-AIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLE 311 (639)
Q Consensus 249 ----------------~~~l~~l~l~~n~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 311 (639)
..-+..++++.|++.. +|..+..++.+. .+.+++|.+ +-+|..++.+++|..|++++|-+.
T Consensus 371 ~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~e-lPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln 448 (565)
T KOG0472|consen 371 DKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCE-LPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN 448 (565)
T ss_pred ccccccCCHHHHHHhhhcceEEEecccchHhh-hhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh
Confidence 0112333444444332 232222222222 223333333 345666677777777777766665
Q ss_pred CCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCCcEEEcccCCCCCCCccccc
Q 041082 312 GPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIG 391 (639)
Q Consensus 312 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 391 (639)
.+|..++.+..|+.|+++.|++. .+|.+...+..++.+-.++|++..+.|+.+.++.+|..|||.+|.+. .+|+.++
T Consensus 449 -~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~Lg 525 (565)
T KOG0472|consen 449 -DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILG 525 (565)
T ss_pred -hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhc
Confidence 56677777777777777777776 56777666666777767778888888888888999999999988874 5788899
Q ss_pred cccccccccccCCCCC
Q 041082 392 NLKVLVGIDLSMNNFS 407 (639)
Q Consensus 392 ~l~~L~~l~ls~N~l~ 407 (639)
++.+|+.|++++|+|.
T Consensus 526 nmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 526 NMTNLRHLELDGNPFR 541 (565)
T ss_pred cccceeEEEecCCccC
Confidence 9999999999999985
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=1e-29 Score=258.95 Aligned_cols=328 Identities=28% Similarity=0.349 Sum_probs=275.5
Q ss_pred CCCCCCEEeccCCcCC-ccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCE
Q 041082 74 NLSSLQTLDLSFNWFS-GSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSD 152 (639)
Q Consensus 74 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 152 (639)
-|+-.+-.|+++|.++ +..|.....|++++.|.|...++. .+|++++.+.+|+.|.+++|++. .+.+.+..|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3556788999999999 689999999999999999999885 68999999999999999999998 56678999999999
Q ss_pred EecCCCCCCC-------CCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCC
Q 041082 153 LDLSHNNLTD-------VQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNY 225 (639)
Q Consensus 153 L~Ls~N~l~~-------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 225 (639)
+.+..|++.. +.+..|+.||||+|++. ..|..+....++.+|+||+|+|..+.-..|.+++.|-.||||+|.
T Consensus 83 v~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr 161 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR 161 (1255)
T ss_pred HhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch
Confidence 9999999975 24778999999999997 778888899999999999999987766778899999999999999
Q ss_pred CCCCCCcchhhccccCCcc---------hh--hhccCccEEEeecCcc-ccccchhhcCCCCCCEEECCCCCCCcccccc
Q 041082 226 LTSSTPELSFLYSLSNCKY---------LE--QSSQSLEVFSMFNCNI-SGGILEEISNLTNLTAIYLAGNKLNGSIPIT 293 (639)
Q Consensus 226 l~~~~~~~~~~~~l~~l~~---------l~--~~~~~l~~l~l~~n~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 293 (639)
+...||....+..+..+.- |. .+.++|++|.+++.+= ...+|.++..+.+|..+++|.|.+. .+|..
T Consensus 162 Le~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPec 240 (1255)
T KOG0444|consen 162 LEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPEC 240 (1255)
T ss_pred hhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHH
Confidence 9998886654433322110 00 1134666777776543 3457888888999999999999987 68899
Q ss_pred ccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCc-ccchhhhhcCCCC
Q 041082 294 LCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLI-SIIPSTLWNLKDI 372 (639)
Q Consensus 294 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L 372 (639)
+.++.+|+.|+|++|+|+. +....+...+|+.|+||.|+++ .+|.++..++.|+.|.+.+|+++ .-+|+.++.+..|
T Consensus 241 ly~l~~LrrLNLS~N~ite-L~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~L 318 (1255)
T KOG0444|consen 241 LYKLRNLRRLNLSGNKITE-LNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQL 318 (1255)
T ss_pred HhhhhhhheeccCcCceee-eeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhh
Confidence 9999999999999999874 4455666778999999999998 78999999999999999999886 3488999999999
Q ss_pred cEEEcccCCCCCCCccccccccccccccccCCCCCC
Q 041082 373 LYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSG 408 (639)
Q Consensus 373 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 408 (639)
..+..++|.+ ...|..+..+..|+.|.|++|++..
T Consensus 319 evf~aanN~L-ElVPEglcRC~kL~kL~L~~NrLiT 353 (1255)
T KOG0444|consen 319 EVFHAANNKL-ELVPEGLCRCVKLQKLKLDHNRLIT 353 (1255)
T ss_pred HHHHhhcccc-ccCchhhhhhHHHHHhcccccceee
Confidence 9999988886 5688999999999999999999854
No 9
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-26 Score=235.74 Aligned_cols=225 Identities=27% Similarity=0.366 Sum_probs=155.9
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh--hhhHHHHHHHHH---------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA--FKSFDVACDMMK---------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~--~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++.+.+-..||+|.+....... ...|..|+.++. .+|+|||++|+|.+++
T Consensus 52 G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l 131 (362)
T KOG0192|consen 52 GSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLL 131 (362)
T ss_pred CCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHH
Confidence 46899999999876669999987543221 457888887754 3799999999999999
Q ss_pred cc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc-ceeeccccccccccccCCCcccccccc-
Q 041082 464 YS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-VAHLSDFGMAKLLLKEDQSFTQNTNTC- 540 (639)
Q Consensus 464 ~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-~~~i~dfgla~~~~~~~~~~~~~~~~~- 540 (639)
+. ....++|..++++|.+||+||.|||+. .+ |||||||+.|||++.++ .+||+|||+++.........+...+|.
T Consensus 132 ~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~-iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~ 209 (362)
T KOG0192|consen 132 HKKRKRKLPLKVRLRIALDIARGMEYLHSE-GP-IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYR 209 (362)
T ss_pred hhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CC-eeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCcc
Confidence 87 467899999999999999999999943 22 99999999999999997 999999999987654211111111221
Q ss_pred --ccccc-cC--CCCCCCccCCCccchHHHHHhhCCCCcceeeeccc-cccccccccchHHHHHHHHHHHhhccCCCCCC
Q 041082 541 --HHRIY-GT--RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNL-LSMEDKYFTTKKQCLSFVFNLAMECTAESPKQ 614 (639)
Q Consensus 541 --~~dvy-Gt--g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~ 614 (639)
+..|+ +. .-....|+|+.|+.+|+.+....|......+...- ......+++.+.+|...+..++.+||+.+|++
T Consensus 210 wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~ 289 (362)
T KOG0192|consen 210 WMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSR 289 (362)
T ss_pred ccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCc
Confidence 11111 11 01122345566666666665555543211111000 00001122334457778888899999999999
Q ss_pred CCCHHHHHHHHHHhHHHHH
Q 041082 615 RINAKESVTRLLKIRDLLL 633 (639)
Q Consensus 615 RP~m~~v~~~l~~~~~~~~ 633 (639)
||++.+|+.+|+.+...+.
T Consensus 290 RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 290 RPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CCCHHHHHHHHHHHHHhhc
Confidence 9999999999999977653
No 10
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=1.5e-29 Score=246.02 Aligned_cols=240 Identities=29% Similarity=0.417 Sum_probs=113.9
Q ss_pred EEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccc
Q 041082 55 TTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNN 134 (639)
Q Consensus 55 ~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (639)
..+.+++|.+.. +.+.+.+|..|.+|++++|++. .+|.+++.+..++.|+.++|++. .+|+.++++.+|..|+.++|
T Consensus 48 ~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n 124 (565)
T KOG0472|consen 48 QKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSN 124 (565)
T ss_pred hhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccc
Confidence 334455554442 2233444455555555555554 34445555555555555555443 34444455555555555555
Q ss_pred cCccccCccccCCCCCCEEecCCCCCCCCC-----CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccc
Q 041082 135 FLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ-----IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNT 209 (639)
Q Consensus 135 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 209 (639)
.+. .+|++++.+..|..|+..+|+++..+ +.+|..+++.+|++....|..+. ++.|+.+|+..|-+. .+|+.
T Consensus 125 ~~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~ 201 (565)
T KOG0472|consen 125 ELK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPE 201 (565)
T ss_pred cee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChh
Confidence 544 33444444444555555555444321 23344444444444433332222 444444444444332 22333
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchh-----------------hhccCccEEEeecCccccccchhhcC
Q 041082 210 FGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLE-----------------QSSQSLEVFSMFNCNISGGILEEISN 272 (639)
Q Consensus 210 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~-----------------~~~~~l~~l~l~~n~l~~~~~~~~~~ 272 (639)
++.+.+|+.|+|.+|++...| + +..|..+. ...+++.+|++..|++.. .|+++.-
T Consensus 202 lg~l~~L~~LyL~~Nki~~lP-e------f~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke-~Pde~cl 273 (565)
T KOG0472|consen 202 LGGLESLELLYLRRNKIRFLP-E------FPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKE-VPDEICL 273 (565)
T ss_pred hcchhhhHHHHhhhcccccCC-C------CCccHHHHHHHhcccHHHhhHHHHhcccccceeeecccccccc-CchHHHH
Confidence 444444444444444443322 1 11111110 012455666666666653 5666666
Q ss_pred CCCCCEEECCCCCCCccccccccCCcCCcEEEccCCcC
Q 041082 273 LTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKL 310 (639)
Q Consensus 273 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 310 (639)
+.+|.+||+|+|.|+ .+|..++++ +|+.|.+.+|.+
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCch
Confidence 666667777776666 345566666 666666666644
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=8.8e-26 Score=229.94 Aligned_cols=218 Identities=26% Similarity=0.356 Sum_probs=156.4
Q ss_pred CcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhcccc-C
Q 041082 408 GFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYS-S 466 (639)
Q Consensus 408 g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~-~ 466 (639)
.||.|+.|.+.+...||+|.+..... ....|..|.++|+. +|+|||++|+|.++|.. .
T Consensus 218 ~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~ 296 (468)
T KOG0197|consen 218 QFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTRE 296 (468)
T ss_pred ccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcC
Confidence 48999999999888999999876432 34678888888764 68999999999999986 5
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccccc-c----cc-
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNT-N----TC- 540 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~-~----~~- 540 (639)
...+.-.+.+.+|.|||+||+||+ +..+|||||-++|||++++..|||+||||||...++.+..+... . ++
T Consensus 297 ~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAP 373 (468)
T KOG0197|consen 297 GGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAP 373 (468)
T ss_pred CCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCH
Confidence 567889999999999999999999 77899999999999999999999999999996555443211100 0 00
Q ss_pred ccccccCCCCCCCccCCCccchHHHHHh-hCCCCcceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 041082 541 HHRIYGTRRNPQMNFFSGEMTLKSWVND-LLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAK 619 (639)
Q Consensus 541 ~~dvyGtg~~p~~~~~~~~~~l~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~ 619 (639)
++-.| ...+-.+|+++.|+.|++.++. ..|...+...|.--.-..+++...++.|...+.+|+..||+.+|++|||+.
T Consensus 374 Ea~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~ 452 (468)
T KOG0197|consen 374 EALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFE 452 (468)
T ss_pred HHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHH
Confidence 00001 1122334455556666555432 222221111111001122345677888999999999999999999999999
Q ss_pred HHHHHHHHhHH
Q 041082 620 ESVTRLLKIRD 630 (639)
Q Consensus 620 ~v~~~l~~~~~ 630 (639)
.....++++..
T Consensus 453 ~L~~~l~~~~~ 463 (468)
T KOG0197|consen 453 TLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHhhh
Confidence 88888877654
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=9.3e-26 Score=240.71 Aligned_cols=366 Identities=30% Similarity=0.350 Sum_probs=239.7
Q ss_pred cEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecc
Q 041082 53 RVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQ 132 (639)
Q Consensus 53 ~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 132 (639)
++..||+++|.++ ..|..+..+.+|+.|+++.|.|. ..|.+..++.+|++|.|.+|.+. ..|.++..+++|++|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 5889999999885 67888999999999999999998 68899999999999999999875 689999999999999999
Q ss_pred cccCccccCccccCCCCCCEEecCCC-CCCCCCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccC
Q 041082 133 NNFLTGTIHSSIFNLSSLSDLDLSHN-NLTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFG 211 (639)
Q Consensus 133 ~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 211 (639)
.|.+. .+|..+..++.+..+..++| .+..+.-..++.++|..|.+.+.++..+.+++. .|+|.+|.+... .+.
T Consensus 123 ~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---dls 196 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---DLS 196 (1081)
T ss_pred hhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---hhh
Confidence 99996 78888899999999999999 333333344777888888888777777666655 678888877622 245
Q ss_pred CCCCCCEEEccCCCCCCCC---CcchhhccccC-Ccch--hhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCC
Q 041082 212 NLINLKRLNLYDNYLTSST---PELSFLYSLSN-CKYL--EQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNK 285 (639)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~---~~~~~~~~l~~-l~~l--~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 285 (639)
.+.+|+.+....|++.... +....+....+ +..+ .....++++++++.|++++ +|+.++.+.+|+.++..+|+
T Consensus 197 ~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~ 275 (1081)
T KOG0618|consen 197 NLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNR 275 (1081)
T ss_pred hccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhc-chHHHHhcccceEecccchh
Confidence 5666666666666654321 11111100000 0000 0113467777777777775 44777777777777777777
Q ss_pred CCc----------------------cccccccCCcCCcEEEccCCcCCCCCchhh-------------------------
Q 041082 286 LNG----------------------SIPITLCKLQKLQLLSFVDNKLEGPIPYEF------------------------- 318 (639)
Q Consensus 286 l~~----------------------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~------------------------- 318 (639)
++. -+|....+++.|++|+|..|+|...++..|
T Consensus 276 l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 276 LVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred HHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 642 234455556677777777776643221110
Q ss_pred cCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCCcEEEcccCCCCC--------------
Q 041082 319 CRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFIS-------------- 384 (639)
Q Consensus 319 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-------------- 384 (639)
..++.|+.|.+.+|.++...-..+.+...|++|+|++|++.......+.++..|+.|+||+|.++.
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL 435 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTL 435 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHH
Confidence 011223334444444443333344455666666666666665555556666666666666665532
Q ss_pred --------CCccccccccccccccccCCCCCCcCcceEEEecCCceeeeEEechhhhh
Q 041082 385 --------PLPLEIGNLKVLVGIDLSMNNFSGFGSIYKARIQDGMKVAVKVFDLQYER 434 (639)
Q Consensus 385 --------~~p~~~~~l~~L~~l~ls~N~l~g~g~vy~~~l~~g~~vavK~l~~~~~~ 434 (639)
.+| ++..++.|..+|+|.|+++....-+...+ ..+|.++++.+.
T Consensus 436 ~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-----p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 436 RAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-----PNLKYLDLSGNT 487 (1081)
T ss_pred hhcCCceeech-hhhhcCcceEEecccchhhhhhhhhhCCC-----cccceeeccCCc
Confidence 244 66677788888888888875332222111 456777776654
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.88 E-value=6.1e-25 Score=234.54 Aligned_cols=342 Identities=29% Similarity=0.356 Sum_probs=174.6
Q ss_pred cEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCC-------
Q 041082 53 RVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAE------- 125 (639)
Q Consensus 53 ~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~------- 125 (639)
++..|+++.|-+. ..|.+..++.+|++|+|.+|.+. .+|.++..+++|+.|+++.|.+. .+|..+..+..
T Consensus 69 ~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s 145 (1081)
T KOG0618|consen 69 HLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAAS 145 (1081)
T ss_pred HHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhh
Confidence 3444555555544 34455555555555555555554 45555555555555555555543 33333333322
Q ss_pred ------------CcEEecccccCccccCccccCCCCCCEEecCCCCCCCC-----------------------CCCCccE
Q 041082 126 ------------LETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDV-----------------------QIPNLEN 170 (639)
Q Consensus 126 ------------L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------------~l~~L~~ 170 (639)
++.++|..|.+.+.++..+..++. .|+|..|.++.. .-++|+.
T Consensus 146 ~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~ 223 (1081)
T KOG0618|consen 146 NNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTA 223 (1081)
T ss_pred cchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchhe
Confidence 333333334444444444444443 455665555421 1234444
Q ss_pred EEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCCCCCCCCcchhhcccc-------CCc
Q 041082 171 LLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLS-------NCK 243 (639)
Q Consensus 171 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~-------~l~ 243 (639)
|+.++|.+....+. .-..+|+.+++++|++++. |++++.+.+|+.++..+|+++..+.......++. .+.
T Consensus 224 L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~ 300 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELE 300 (1081)
T ss_pred eeeccCcceeeccc--cccccceeeecchhhhhcc-hHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhh
Confidence 55555554422211 1234667777777777654 3667777777777777776654433222111111 111
Q ss_pred chhhh---ccCccEEEeecCccccccchhhc-------------------------CCCCCCEEECCCCCCCcccccccc
Q 041082 244 YLEQS---SQSLEVFSMFNCNISGGILEEIS-------------------------NLTNLTAIYLAGNKLNGSIPITLC 295 (639)
Q Consensus 244 ~l~~~---~~~l~~l~l~~n~l~~~~~~~~~-------------------------~l~~L~~L~Ls~N~l~~~~p~~~~ 295 (639)
++... ..++++|++..|++.......+. .++.|+.|++.+|.++...-..+.
T Consensus 301 yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~ 380 (1081)
T KOG0618|consen 301 YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLV 380 (1081)
T ss_pred hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhc
Confidence 11111 23455666666655432211110 122355566666666655545555
Q ss_pred CCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCCcEE
Q 041082 296 KLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYL 375 (639)
Q Consensus 296 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 375 (639)
+.++|+.|+|++|++...+...+.++..|+.|+||+|+++ .+|..+..+..|++|...+|++.. .| .+..++.|+.+
T Consensus 381 ~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~-fP-e~~~l~qL~~l 457 (1081)
T KOG0618|consen 381 NFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLS-FP-ELAQLPQLKVL 457 (1081)
T ss_pred cccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceee-ch-hhhhcCcceEE
Confidence 6666666666666666444455566666666666666666 355666666666666666666554 33 55666666666
Q ss_pred EcccCCCCCCCccccccccccccccccCCC
Q 041082 376 NLSSNFFISPLPLEIGNLKVLVGIDLSMNN 405 (639)
Q Consensus 376 ~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~ 405 (639)
|+|.|+++...-..-..-++|++||+++|.
T Consensus 458 DlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 458 DLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred ecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 666666654322222222566666666664
No 14
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.88 E-value=1.3e-22 Score=197.73 Aligned_cols=198 Identities=23% Similarity=0.283 Sum_probs=134.5
Q ss_pred cCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhcccc
Q 041082 409 FGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 409 ~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
-|+||++... .+...|+|.+..... ...++..+|+++.+ .++||||.+|||.+.+..
T Consensus 92 gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~ 171 (364)
T KOG0581|consen 92 GGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR 171 (364)
T ss_pred CcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh
Confidence 4789999864 679999999954432 33456677777632 378999999999998864
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---ccc-------
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---FTQ------- 535 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---~~~------- 535 (639)
. ..++....-+||.+|.+||.|||+ ...||||||||+|||+...+++||||||.++.+...... .+.
T Consensus 172 ~-g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPER 248 (364)
T KOG0581|consen 172 V-GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPER 248 (364)
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhh
Confidence 3 347888889999999999999996 378999999999999999999999999999987654210 010
Q ss_pred ---cccccccccccCCCCCCCccCCCccchHHHHHhhCCCC--------cceeeeccccccccccccchH-HHHHHHHHH
Q 041082 536 ---NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVNDLLPIS--------VMEVVDVNLLSMEDKYFTTKK-QCLSFVFNL 603 (639)
Q Consensus 536 ---~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~~~~--------~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~l 603 (639)
...+.++||| +-|..+.+.+...+|.. ..+.++.-+.++ .+..+. .+-.++...
T Consensus 249 i~g~~Ys~~sDIW-----------SLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p---pP~lP~~~fS~ef~~F 314 (364)
T KOG0581|consen 249 ISGESYSVKSDIW-----------SLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP---PPRLPEGEFSPEFRSF 314 (364)
T ss_pred hcCCcCCccccee-----------cccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC---CCCCCcccCCHHHHHH
Confidence 0112255555 33444444333333221 011111111111 011122 255567778
Q ss_pred HhhccCCCCCCCCCHHHHHH
Q 041082 604 AMECTAESPKQRINAKESVT 623 (639)
Q Consensus 604 ~~~C~~~~p~~RP~m~~v~~ 623 (639)
.-.|++.+|++||+..|.++
T Consensus 315 V~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 315 VSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHhcCCcccCCCHHHHhc
Confidence 88999999999999999885
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=5.3e-22 Score=218.97 Aligned_cols=261 Identities=25% Similarity=0.330 Sum_probs=180.0
Q ss_pred EEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEeccc
Q 041082 54 VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQN 133 (639)
Q Consensus 54 v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (639)
-..|++++++++ .+|..+. ++|+.|++++|+++ .+|.. +++|+.|++++|+++. +|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeeccC
Confidence 356899999998 5787776 48999999999998 46753 5789999999999885 4543 36788999999
Q ss_pred ccCccccCccccCCCCCCEEecCCCCCCCCC--CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccC
Q 041082 134 NFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ--IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFG 211 (639)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 211 (639)
|.++. +|.. .++|+.|++++|.++.++ +++|+.|+|++|++++ +|.. ..+|+.|++++|.+.++ |.
T Consensus 272 N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~L-P~--- 339 (788)
T PRK15387 272 NPLTH-LPAL---PSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTSL-PT--- 339 (788)
T ss_pred Cchhh-hhhc---hhhcCEEECcCCccccccccccccceeECCCCcccc-CCCC---cccccccccccCccccc-cc---
Confidence 99874 4443 356888999999988764 4688888998888885 4442 24577888888888753 43
Q ss_pred CCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCcccc
Q 041082 212 NLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIP 291 (639)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 291 (639)
...+|+.|+|++|++++.++. ..+++.|++++|.+.+ +|.. .++|+.|++++|.|++ +|
T Consensus 340 lp~~Lq~LdLS~N~Ls~LP~l----------------p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP 398 (788)
T PRK15387 340 LPSGLQELSVSDNQLASLPTL----------------PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP 398 (788)
T ss_pred cccccceEecCCCccCCCCCC----------------Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CC
Confidence 124788888888888765421 1245556666666664 4432 2457777777777764 44
Q ss_pred ccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhh
Q 041082 292 ITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTL 366 (639)
Q Consensus 292 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~ 366 (639)
.. .++|+.|++++|++++ +|.. ..+|+.|++++|+++ .+|..+.++++|+.|++++|++++..|..+
T Consensus 399 ~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 399 VL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred Cc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 32 2456677777777764 4432 234566777777776 456666667777777777777776666555
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.88 E-value=7.8e-23 Score=209.60 Aligned_cols=218 Identities=20% Similarity=0.349 Sum_probs=150.1
Q ss_pred CcCcceEEEecCCceeeeEEechhhh--hhhhhHHHHHHHHHh-------------------hhhhcCCCCCchhccccC
Q 041082 408 GFGSIYKARIQDGMKVAVKVFDLQYE--RAFKSFDVACDMMKK-------------------LVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 408 g~g~vy~~~l~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~~-------------------Lv~ey~~~gsL~~~l~~~ 466 (639)
.||+||+|.+.+ .||||.++.... ...+.|..|+..+|. +|..++++-+|+.++|-.
T Consensus 404 sFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~ 481 (678)
T KOG0193|consen 404 SFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSSLYTHLHVQ 481 (678)
T ss_pred cccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCchhhhhccch
Confidence 489999999984 589999987653 346789999988653 456677888999999987
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc--cCCCcccccccc---c
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK--EDQSFTQNTNTC---H 541 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~--~~~~~~~~~~~~---~ 541 (639)
...++..+..+||.+||+||.||| ...|||||||+.||++.++..+||+|||+|-.-.. .........+.. +
T Consensus 482 etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmA 558 (678)
T KOG0193|consen 482 ETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMA 558 (678)
T ss_pred hhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhc
Confidence 778999999999999999999999 88999999999999999999999999999853221 110000000000 0
Q ss_pred cccc--c--CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccc--ccc---cccccchHHHHHHHHHHHhhccCCCC
Q 041082 542 HRIY--G--TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLL--SME---DKYFTTKKQCLSFVFNLAMECTAESP 612 (639)
Q Consensus 542 ~dvy--G--tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~--~~~---~~~~~~~~~~~~~~~~l~~~C~~~~p 612 (639)
..|- + -...+..|+|..|..+-|.....+|.. ...-|.-|. +.. .+.......|...+.+|...||..++
T Consensus 559 PEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~ 637 (678)
T KOG0193|consen 559 PEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDR 637 (678)
T ss_pred HHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCc
Confidence 0000 0 122344455555555555555555543 211222111 000 00111224577788999999999999
Q ss_pred CCCCCHHHHHHHHHHhHHH
Q 041082 613 KQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 613 ~~RP~m~~v~~~l~~~~~~ 631 (639)
++||.+.+++.+|+.+..+
T Consensus 638 ~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 638 EERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ccCccHHHHHHHHHHhhhc
Confidence 9999999999999888665
No 17
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=1.1e-21 Score=216.39 Aligned_cols=265 Identities=24% Similarity=0.342 Sum_probs=208.6
Q ss_pred CCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEEec
Q 041082 76 SSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDL 155 (639)
Q Consensus 76 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 155 (639)
..-..|+|+.|.++ .+|..+. ++|+.|++++|+++. +|.. +++|++|+|++|+|+. +|.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 45678999999998 6888876 489999999999985 5643 5889999999999985 4543 468999999
Q ss_pred CCCCCCCCC--CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCCCCCCCCcc
Q 041082 156 SHNNLTDVQ--IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPEL 233 (639)
Q Consensus 156 s~N~l~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 233 (639)
++|.|+.++ +.+|+.|++++|+++. +|.. +++|+.|++++|++.++ |.. ...|+.|++++|++++.+.
T Consensus 270 s~N~L~~Lp~lp~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~LP~-- 339 (788)
T PRK15387 270 FSNPLTHLPALPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTSLPT-- 339 (788)
T ss_pred cCCchhhhhhchhhcCEEECcCCcccc-cccc---ccccceeECCCCccccC-CCC---cccccccccccCccccccc--
Confidence 999998764 4689999999999984 4543 46899999999999875 432 3468889999999986542
Q ss_pred hhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCccccccccCCcCCcEEEccCCcCCCC
Q 041082 234 SFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGP 313 (639)
Q Consensus 234 ~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 313 (639)
...+|+.|++++|++++ +|.. .++|+.|++++|.|++ +|.. ..+|+.|++++|++++
T Consensus 340 --------------lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~- 396 (788)
T PRK15387 340 --------------LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS- 396 (788)
T ss_pred --------------cccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-
Confidence 11368899999999986 4432 3578889999999985 5643 3578999999999985
Q ss_pred CchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCCcEEEcccCCCCCCCcccccc
Q 041082 314 IPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILYLNLSSNFFISPLPLEIGN 392 (639)
Q Consensus 314 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 392 (639)
+|.. .++|+.|++++|.++. +|..+ .+|+.|++++|+++. +|..+..+++|..+++++|++++..|..+..
T Consensus 397 LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 397 LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCcccc-cChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 4433 3679999999999985 56543 467889999999985 6888999999999999999999887776644
No 18
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.87 E-value=1.1e-20 Score=224.03 Aligned_cols=311 Identities=21% Similarity=0.251 Sum_probs=158.5
Q ss_pred cCCcCCCCCC-CCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCcccc
Q 041082 67 TIPSELGNLS-SLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIF 145 (639)
Q Consensus 67 ~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 145 (639)
.+|..|..++ +|+.|++.++.+. .+|..| ...+|+.|++.+|++. .+|..+..+++|+.|+|++|...+.+| .+.
T Consensus 579 ~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls 654 (1153)
T PLN03210 579 HLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLS 654 (1153)
T ss_pred ecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccc
Confidence 3455554443 3666666666554 455554 3456666666666554 345555566666666666554434444 255
Q ss_pred CCCCCCEEecCCCC-CCCC-----CCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEE
Q 041082 146 NLSSLSDLDLSHNN-LTDV-----QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRL 219 (639)
Q Consensus 146 ~l~~L~~L~Ls~N~-l~~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 219 (639)
.+++|+.|+|++|. +..+ .+++|+.|++++|...+.+|..+ ++++|+.|++++|...+..|.. .++|+.|
T Consensus 655 ~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L 730 (1153)
T PLN03210 655 MATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWL 730 (1153)
T ss_pred cCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCee
Confidence 56666666665543 2221 24556666666554444455443 4566666666666544444432 3455666
Q ss_pred EccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCc-------cccccchhhcCCCCCCEEECCCCCCCccccc
Q 041082 220 NLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCN-------ISGGILEEISNLTNLTAIYLAGNKLNGSIPI 292 (639)
Q Consensus 220 ~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~-------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 292 (639)
++++|.+...+... .+. +|+.|.+.++. +....+......++|+.|++++|...+.+|.
T Consensus 731 ~L~~n~i~~lP~~~----~l~----------~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~ 796 (1153)
T PLN03210 731 DLDETAIEEFPSNL----RLE----------NLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPS 796 (1153)
T ss_pred ecCCCccccccccc----ccc----------ccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccCh
Confidence 66666655433221 011 12222222211 0000111112234566666666655555566
Q ss_pred cccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCC
Q 041082 293 TLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDI 372 (639)
Q Consensus 293 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 372 (639)
.++++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.. .++|+.|++++|.+.. +|..+..+++|
T Consensus 797 si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~-iP~si~~l~~L 871 (1153)
T PLN03210 797 SIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEE-VPWWIEKFSNL 871 (1153)
T ss_pred hhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCcc-ChHHHhcCCCC
Confidence 66666666666666554434444443 4556666666665443334432 2455666666666553 45556666666
Q ss_pred cEEEcccCCCCCCCccccccccccccccccCC
Q 041082 373 LYLNLSSNFFISPLPLEIGNLKVLVGIDLSMN 404 (639)
Q Consensus 373 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N 404 (639)
++|++++|+-...+|..+..++.|+.++++++
T Consensus 872 ~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 872 SFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 66666654333345555555666666665544
No 19
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.86 E-value=9.8e-24 Score=205.51 Aligned_cols=277 Identities=25% Similarity=0.246 Sum_probs=173.1
Q ss_pred cEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccC-CcCCCCCCccccCCCCCcEEec
Q 041082 53 RVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNN-NTLFGEIPEELGNLAELETLWL 131 (639)
Q Consensus 53 ~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L 131 (639)
..+.|+|..|+|+.+.|.+|+.+++|+.||||+|+|+.+-|++|.++..|.+|-+.+ |+|+......|++|..|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 356677777777766666777777777777777777777777777777776666555 6666555556777777777777
Q ss_pred ccccCccccCccccCCCCCCEEecCCCCCCCCCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCc--------
Q 041082 132 QNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFF-------- 203 (639)
Q Consensus 132 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-------- 203 (639)
.-|++.-+..+.|..+++|..|.|..|.+..+ --..|..+..++.+.+..|.+.
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i------------------~~~tf~~l~~i~tlhlA~np~icdCnL~wl 209 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSI------------------CKGTFQGLAAIKTLHLAQNPFICDCNLPWL 209 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhh------------------ccccccchhccchHhhhcCccccccccchh
Confidence 77777666666667766666666666655432 2224445555555555555431
Q ss_pred ----ccCccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccc-hhhcCCCCCCE
Q 041082 204 ----DLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGIL-EEISNLTNLTA 278 (639)
Q Consensus 204 ----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~-~~~~~l~~L~~ 278 (639)
...|..++......-..+.++++....+.-. . .+++ .+..-..+.+...+..| ..|..+++|+.
T Consensus 210 a~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf-~------c~~e----sl~s~~~~~d~~d~~cP~~cf~~L~~L~~ 278 (498)
T KOG4237|consen 210 ADDLAMNPIETSGARCVSPYRLYYKRINQEDARKF-L------CSLE----SLPSRLSSEDFPDSICPAKCFKKLPNLRK 278 (498)
T ss_pred hhHHhhchhhcccceecchHHHHHHHhcccchhhh-h------hhHH----hHHHhhccccCcCCcChHHHHhhcccceE
Confidence 1112222222222222333333322211100 0 0000 01000112222333333 24778888888
Q ss_pred EECCCCCCCccccccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcC
Q 041082 279 IYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKL 358 (639)
Q Consensus 279 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 358 (639)
|+|++|++++.-+.+|..+.+++.|.|..|++...-...|.++..|+.|+|.+|+|+...|.+|..+.+|..|++-.|.+
T Consensus 279 lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 279 LNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred eccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 88888888888888888888888888888888877777888888888888888888888888888888888888776654
No 20
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.86 E-value=2e-20 Score=222.00 Aligned_cols=315 Identities=22% Similarity=0.260 Sum_probs=249.9
Q ss_pred CcCCCCCCCCCEEeccCCc------CCccCCccccCCc-ccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccC
Q 041082 69 PSELGNLSSLQTLDLSFNW------FSGSIPSSIFNMS-SLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIH 141 (639)
Q Consensus 69 p~~l~~l~~L~~L~Ls~N~------l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 141 (639)
+..|.++++|+.|.+..+. +...+|..|..++ +|+.|.+.++.+. .+|..| ...+|+.|+|.+|++. .+|
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 4568999999999997653 3445788887775 6999999998874 667777 5789999999999997 577
Q ss_pred ccccCCCCCCEEecCCCC-CCCC----CCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCC
Q 041082 142 SSIFNLSSLSDLDLSHNN-LTDV----QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINL 216 (639)
Q Consensus 142 ~~~~~l~~L~~L~Ls~N~-l~~~----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 216 (639)
..+..+++|+.|+|+++. ++.+ .+++|+.|+|++|.....+|..+.++++|+.|++++|...+.+|..+ ++++|
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL 706 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSL 706 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCC
Confidence 788999999999999764 4443 36899999999998888899999999999999999987666777655 79999
Q ss_pred CEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCC-------Ccc
Q 041082 217 KRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKL-------NGS 289 (639)
Q Consensus 217 ~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l-------~~~ 289 (639)
+.|++++|......|. ...+++.|++++|.+.. +|..+ .+++|+.|.+.++.. ...
T Consensus 707 ~~L~Lsgc~~L~~~p~---------------~~~nL~~L~L~~n~i~~-lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 707 YRLNLSGCSRLKSFPD---------------ISTNISWLDLDETAIEE-FPSNL-RLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred CEEeCCCCCCcccccc---------------ccCCcCeeecCCCcccc-ccccc-cccccccccccccchhhcccccccc
Confidence 9999998854332221 13478889999988754 55544 578888888877432 212
Q ss_pred ccccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcC
Q 041082 290 IPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNL 369 (639)
Q Consensus 290 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 369 (639)
.|..+...++|+.|++++|...+.+|..++.+++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. .
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~ 845 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---S 845 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---c
Confidence 22233345789999999999888899999999999999999986666778766 7899999999998766666653 3
Q ss_pred CCCcEEEcccCCCCCCCccccccccccccccccC-CCCCCc
Q 041082 370 KDILYLNLSSNFFISPLPLEIGNLKVLVGIDLSM-NNFSGF 409 (639)
Q Consensus 370 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~-N~l~g~ 409 (639)
.+|+.|++++|.+. .+|..+..+++|+.|++++ |++..+
T Consensus 846 ~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l 885 (1153)
T PLN03210 846 TNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRV 885 (1153)
T ss_pred cccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCcc
Confidence 67899999999986 5788999999999999998 556543
No 21
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.85 E-value=5.7e-22 Score=212.10 Aligned_cols=217 Identities=28% Similarity=0.412 Sum_probs=153.6
Q ss_pred CcCcceEEEecC------CceeeeEEechhhhh-hhhhHHHHHHHHHh--------------------hhhhcCCCCCch
Q 041082 408 GFGSIYKARIQD------GMKVAVKVFDLQYER-AFKSFDVACDMMKK--------------------LVLEYMPHGSLE 460 (639)
Q Consensus 408 g~g~vy~~~l~~------g~~vavK~l~~~~~~-~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~ 460 (639)
.||.||++...+ -+.||||.+...... ...+|.+|.+++.. +|+|||..|+|.
T Consensus 498 aFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~ 577 (774)
T KOG1026|consen 498 AFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLH 577 (774)
T ss_pred hhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHH
Confidence 389999988654 378999999765544 78899999998653 689999999999
Q ss_pred hcccc---------CC----ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 461 KCLYS---------SN----YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 461 ~~l~~---------~~----~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
++|.. +. ..|+-.+.+.||.|||.||+||- +...|||||-++|+|+.+.+.+||+||||+|-.-
T Consensus 578 eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiY 654 (774)
T KOG1026|consen 578 EFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIY 654 (774)
T ss_pred HHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEEEecccccchhhh
Confidence 99864 11 13788899999999999999999 7789999999999999999999999999999765
Q ss_pred ccCCCc-c-cc----cccc-ccccccCCCCCCCccCCCccchHHHHHhhC-CCC---cceeeeccccccccccccchHHH
Q 041082 528 KEDQSF-T-QN----TNTC-HHRIYGTRRNPQMNFFSGEMTLKSWVNDLL-PIS---VMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 528 ~~~~~~-~-~~----~~~~-~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~-~~~---~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
+.++.. . .. .-.. ++=.|| .....+|+|+.|+.|||-..... |.. -.|+++---.+ ...+.+++|
T Consensus 655 ssDYYk~~~~t~lPIRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g---~lL~~Pe~C 730 (774)
T KOG1026|consen 655 SSDYYKVRGNTLLPIRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG---QLLSCPENC 730 (774)
T ss_pred hhhhhcccCCceeeeecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC---CcccCCCCC
Confidence 554321 0 00 0000 111121 00122344555666665443222 211 12232211111 113457889
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
+.++++|++.||++.|++||+++||-.+|+..-.+
T Consensus 731 P~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 731 PTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred CHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999977544
No 22
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.1e-21 Score=217.50 Aligned_cols=217 Identities=25% Similarity=0.344 Sum_probs=152.2
Q ss_pred cCcceEEEecC--C----ceeeeEEechhh-hhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchh
Q 041082 409 FGSIYKARIQD--G----MKVAVKVFDLQY-ERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEK 461 (639)
Q Consensus 409 ~g~vy~~~l~~--g----~~vavK~l~~~~-~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~ 461 (639)
||.||.|.+.+ | ..||+|.+.... .+....|-.|...|+. ++.|||++|+|..
T Consensus 705 FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~s 784 (1025)
T KOG1095|consen 705 FGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLS 784 (1025)
T ss_pred ccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHH
Confidence 89999999864 3 348888875443 3445677777766543 6789999999999
Q ss_pred ccccC------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc
Q 041082 462 CLYSS------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ 535 (639)
Q Consensus 462 ~l~~~------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~ 535 (639)
+|++. ...++....+.+|.|||+|+.||+ ..+.|||||.++|+||++...|||+||||||.+...++....
T Consensus 785 flr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~ 861 (1025)
T KOG1095|consen 785 FLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKH 861 (1025)
T ss_pred HHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheecc
Confidence 99875 456888889999999999999999 788999999999999999999999999999955443322111
Q ss_pred cccccccccc-c-----C-CCCCCCccCCCccchHHHHHh-hCCCCc---ceeeeccccccccccccchHHHHHHHHHHH
Q 041082 536 NTNTCHHRIY-G-----T-RRNPQMNFFSGEMTLKSWVND-LLPISV---MEVVDVNLLSMEDKYFTTKKQCLSFVFNLA 604 (639)
Q Consensus 536 ~~~~~~~dvy-G-----t-g~~p~~~~~~~~~~l~~~~~~-~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~ 604 (639)
..... .--| - + ...-+.|+|+.|+-|||.... ..|... .+++..-+.+ .+.+.+..|..++++|+
T Consensus 862 ~~a~l-PvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g---gRL~~P~~CP~~ly~lM 937 (1025)
T KOG1095|consen 862 GEAML-PVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG---GRLDPPSYCPEKLYQLM 937 (1025)
T ss_pred Ccccc-ceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC---CccCCCCCCChHHHHHH
Confidence 00000 0000 0 0 001233455666666665533 334331 2222211111 14455778999999999
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 041082 605 MECTAESPKQRINAKESVTRLLKIRDLL 632 (639)
Q Consensus 605 ~~C~~~~p~~RP~m~~v~~~l~~~~~~~ 632 (639)
..||+.+|++||++..++++++.+....
T Consensus 938 ~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 938 LQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 9999999999999999999998886653
No 23
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=5.9e-20 Score=204.19 Aligned_cols=314 Identities=21% Similarity=0.315 Sum_probs=145.1
Q ss_pred ChhHHHHHHHHHhcCCCCCCc--ccccCCCCCCCCcCccc----------------eecCCCCCcEEEEEeCCCCCcccC
Q 041082 7 NNHLSFQVFVLKGHVTDDPTN--FLAKNWNTSSTVCHWTG----------------VSCDVRSYRVTTLNISGLSLTSTI 68 (639)
Q Consensus 7 ~~~~~~~ll~~k~~~~~~~~~--~l~~~w~~~~~~c~w~g----------------v~c~~~~~~v~~L~L~~~~l~~~~ 68 (639)
...+.+.+++..+.+ ..|.- ....+|...+++|.-.. |.|.. ..|+.+.+-+.......
T Consensus 61 ~~~~~~~~~~~~~~l-~~p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~~~~~~ 137 (754)
T PRK15370 61 SPEEIKSKFECLRML-AFPAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESEQASSA 137 (754)
T ss_pred CHHHHHHHHHHHHHh-cCCchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--CcccccccccccccccC
Confidence 345666777777766 35531 12234888888885332 66754 46777766654221110
Q ss_pred --CcCC-------------------------------CCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCC
Q 041082 69 --PSEL-------------------------------GNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGE 115 (639)
Q Consensus 69 --p~~l-------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 115 (639)
+... +--.+...|+++++.++ .+|..+. +.|+.|+|++|+++.
T Consensus 138 ~~~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts- 213 (754)
T PRK15370 138 SGSKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKS- 213 (754)
T ss_pred CCCCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-
Confidence 0000 01123455555555555 3444432 345555555555552
Q ss_pred CCccccCCCCCcEEecccccCccccCccccCCCCCCEEecCCCCCCCCCCCCccEEEccCCccCccCCccccCCCCCcEE
Q 041082 116 IPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSIL 195 (639)
Q Consensus 116 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (639)
+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|++|.++. +|..+. ++|+.|
T Consensus 214 LP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~~-------------------LP~~l~--s~L~~L 267 (754)
T PRK15370 214 LPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRITE-------------------LPERLP--SALQSL 267 (754)
T ss_pred CChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccCc-------------------CChhHh--CCCCEE
Confidence 333332 35555555555555 2333322 245555555555543 333322 244555
Q ss_pred EcccCCCcccCccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCC
Q 041082 196 ELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTN 275 (639)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~ 275 (639)
++++|++.. +|..+. ++|+.|++++|+++..+..+ ..+++.|++++|.++. +|..+ .++
T Consensus 268 ~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~LP~~l---------------p~sL~~L~Ls~N~Lt~-LP~~l--~~s 326 (754)
T PRK15370 268 DLFHNKISC-LPENLP--EELRYLSVYDNSIRTLPAHL---------------PSGITHLNVQSNSLTA-LPETL--PPG 326 (754)
T ss_pred ECcCCccCc-cccccC--CCCcEEECCCCccccCcccc---------------hhhHHHHHhcCCcccc-CCccc--ccc
Confidence 555554443 233221 24555555555544332110 0123334444444442 22222 134
Q ss_pred CCEEECCCCCCCccccccccCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCC
Q 041082 276 LTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDS 355 (639)
Q Consensus 276 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 355 (639)
|+.|++++|.+++ +|..+. ++|+.|++++|++.. +|..+ .++|+.|++++|.++. +|..+. .+|+.|++++
T Consensus 327 L~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~l--p~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~ 397 (754)
T PRK15370 327 LKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETL--PPTITTLDVSRNALTN-LPENLP--AALQIMQASR 397 (754)
T ss_pred ceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhh--cCCcCEEECCCCcCCC-CCHhHH--HHHHHHhhcc
Confidence 5555555555553 343332 455555555555542 33333 2355566666665553 333332 2455556666
Q ss_pred CcCccc---chhhhhcCCCCcEEEcccCCCC
Q 041082 356 NKLISI---IPSTLWNLKDILYLNLSSNFFI 383 (639)
Q Consensus 356 N~l~~~---~p~~~~~l~~L~~L~ls~N~l~ 383 (639)
|++... +|..+..++.+..+++.+|++.
T Consensus 398 N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 398 NNLVRLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcccCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 655532 1222233355556666666553
No 24
>PHA02988 hypothetical protein; Provisional
Probab=99.83 E-value=1.6e-20 Score=189.93 Aligned_cols=201 Identities=21% Similarity=0.227 Sum_probs=140.4
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh---hhhHHHHHHHHH------------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA---FKSFDVACDMMK------------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~---~~~f~~e~~~~~------------------------~Lv~ey~~~gsL 459 (639)
++++.||++.. +|..+|+|.+....... ...|..|+..++ .+|+||+++|+|
T Consensus 31 g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L 109 (283)
T PHA02988 31 NDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYL 109 (283)
T ss_pred CCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcH
Confidence 46788999988 57899999986543222 345666666532 268999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------ 533 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------ 533 (639)
.+++... ..++|..+.+++.+++.|++|+|.. ..++||||||+||++++++.+|++|||+++.+.......
T Consensus 110 ~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y 186 (283)
T PHA02988 110 REVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVY 186 (283)
T ss_pred HHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccc
Confidence 9998753 4689999999999999999999942 356799999999999999999999999998654322110
Q ss_pred --cc------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 534 --TQ------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 534 --~~------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
+. ...+.++||| | ||+.|..+. .-.++.......... +. .+..+
T Consensus 187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~-----~~~~~~~~i~~~~~~----~~----------~~~~~ 247 (283)
T PHA02988 187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL-----TTKEIYDLIINKNNS----LK----------LPLDC 247 (283)
T ss_pred cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHhcCCC----CC----------CCCcC
Confidence 00 1123377887 6 777776532 111111111111000 00 01123
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
...+.+++.+||+.+|++||||.||++.|+.++.
T Consensus 248 ~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 248 PLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 3457788999999999999999999999987753
No 25
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.82 E-value=3.1e-20 Score=193.17 Aligned_cols=202 Identities=21% Similarity=0.325 Sum_probs=133.0
Q ss_pred CCcCcceEEEe------cCCceeeeEEechhhh-hhhhhHHHHHHHHH----------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI------QDGMKVAVKVFDLQYE-RAFKSFDVACDMMK----------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l------~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~----------------------~Lv~ey~~~g 457 (639)
.++|.||++.. ..+..+|+|.+..... .....+..|+.++. .+++||+++|
T Consensus 18 G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g 97 (338)
T cd05102 18 GAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYG 97 (338)
T ss_pred CCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCC
Confidence 56899999864 2346899999864321 22234555554432 2578999999
Q ss_pred CchhccccC-------------------------------------------------------------CccCCHHHHH
Q 041082 458 SLEKCLYSS-------------------------------------------------------------NYILDIFQRL 476 (639)
Q Consensus 458 sL~~~l~~~-------------------------------------------------------------~~~l~~~~~~ 476 (639)
+|.+++... ...++|....
T Consensus 98 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (338)
T cd05102 98 NLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLI 177 (338)
T ss_pred cHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHH
Confidence 998877531 1247888899
Q ss_pred HHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-------------cc----cccc
Q 041082 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------------TQ----NTNT 539 (639)
Q Consensus 477 ~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------------~~----~~~~ 539 (639)
+++.++++||+||| ..+|+||||||+||+++.++.+|++|||+++......... +. ...+
T Consensus 178 ~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~ 254 (338)
T cd05102 178 CYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYT 254 (338)
T ss_pred HHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCC
Confidence 99999999999999 6789999999999999999999999999998653321100 00 0112
Q ss_pred cccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHHHhhccC
Q 041082 540 CHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTA 609 (639)
Q Consensus 540 ~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~ 609 (639)
.++||| | | |+.|....... ..+..... .. .. ...+..+...+.+++.+|++
T Consensus 255 ~~sDiwslG~il~el~~~g~~pf~~~~~~----~~~~~~~~-~~-------~~-------~~~~~~~~~~l~~li~~cl~ 315 (338)
T cd05102 255 TQSDVWSFGVLLWEIFSLGASPYPGVQIN----EEFCQRLK-DG-------TR-------MRAPENATPEIYRIMLACWQ 315 (338)
T ss_pred cccCHHHHHHHHHHHHhCCCCCCCCCCcc----HHHHHHHh-cC-------CC-------CCCCCCCCHHHHHHHHHHcc
Confidence 356666 4 2 55554321100 01111000 00 00 00112233457789999999
Q ss_pred CCCCCCCCHHHHHHHHHHhHH
Q 041082 610 ESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 610 ~~p~~RP~m~~v~~~l~~~~~ 630 (639)
.+|++||+|.||+++|+++.+
T Consensus 316 ~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 316 GDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999997754
No 26
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.82 E-value=8.4e-21 Score=199.36 Aligned_cols=198 Identities=22% Similarity=0.457 Sum_probs=152.1
Q ss_pred cCcceEEEecC----CceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 409 FGSIYKARIQD----GMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 409 ~g~vy~~~l~~----g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
||.|++|.+.- ...||+|.+...+. +...+|..|..+|. ++|.|||+||+|..+|
T Consensus 642 FGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFL 721 (996)
T KOG0196|consen 642 FGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFL 721 (996)
T ss_pred ccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHH
Confidence 89999999852 37899999988774 45678888887753 2678999999999999
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-cccc------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-FTQN------ 536 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-~~~~------ 536 (639)
+..+..++|.|.+.+..|||.||.||- ..+.|||||-++|||++.+..+||+|||++|.+.++... .+..
T Consensus 722 R~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPi 798 (996)
T KOG0196|consen 722 RQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPI 798 (996)
T ss_pred hhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccce
Confidence 987777999999999999999999999 778999999999999999999999999999988665421 0000
Q ss_pred -----------ccccccccc--c--------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 537 -----------TNTCHHRIY--G--------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 537 -----------~~~~~~dvy--G--------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
.-|..+||| | -|.+|+.++- .++ +...|+ .+++...+.+
T Consensus 799 RWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--NQd------------VIkaIe------~gyRLPpPmD 858 (996)
T KOG0196|consen 799 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQD------------VIKAIE------QGYRLPPPMD 858 (996)
T ss_pred eecChhHhhhcccCchhhccccceEEEEecccCCCcccccc--hHH------------HHHHHH------hccCCCCCCC
Confidence 111256776 5 4556654321 000 111111 1223344678
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
|...+.+||+.||+.+=.+||++.||+..|.++-
T Consensus 859 CP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 859 CPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred CcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999998763
No 27
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.82 E-value=6.1e-21 Score=195.01 Aligned_cols=216 Identities=21% Similarity=0.328 Sum_probs=155.9
Q ss_pred CCCCC--cCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHHh--------------------hhhhcCCCCCch
Q 041082 404 NNFSG--FGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------LVLEYMPHGSLE 460 (639)
Q Consensus 404 N~l~g--~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~ 460 (639)
+.+.| +|.||.|.|. ..-.||||.+..+... ..+|..|..+|+. +|.|||..|+|-
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLL 351 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLL 351 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHH
Confidence 44444 8899999985 3578999998765443 4577777766552 578999999999
Q ss_pred hccccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccccccc
Q 041082 461 KCLYSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT 539 (639)
Q Consensus 461 ~~l~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~ 539 (639)
++|++.. ..+.-.-.+.+|.||+.||+||. ....|||||-++|.|+.++..+||+|||++|++..+.+.. .++.
T Consensus 352 dYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA--HAGA 426 (1157)
T KOG4278|consen 352 DYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA--HAGA 426 (1157)
T ss_pred HHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec--ccCc
Confidence 9998733 34566667899999999999999 7889999999999999999999999999999998876531 1111
Q ss_pred c--------ccccccCCCCCCCccCCCccchHHHHHh-hCCCCc---ceeeeccccccccccccchHHHHHHHHHHHhhc
Q 041082 540 C--------HHRIYGTRRNPQMNFFSGEMTLKSWVND-LLPISV---MEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMEC 607 (639)
Q Consensus 540 ~--------~~dvyGtg~~p~~~~~~~~~~l~~~~~~-~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C 607 (639)
. ++-.| -..+-..|+|..|+-||+.++. +.|... ..+.+- . +-+++++.++.|..+|++|++.|
T Consensus 427 KFPIKWTAPEsLAy-NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~L--L-EkgyRM~~PeGCPpkVYeLMraC 502 (1157)
T KOG4278|consen 427 KFPIKWTAPESLAY-NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGL--L-EKGYRMDGPEGCPPKVYELMRAC 502 (1157)
T ss_pred cCcccccCcccccc-cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHH--H-hccccccCCCCCCHHHHHHHHHH
Confidence 0 11111 1112233444556666666643 333321 111111 0 12346677889999999999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhH
Q 041082 608 TAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 608 ~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
|+++|++||+++|+-+.++.+-
T Consensus 503 W~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 503 WNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred hcCCcccCccHHHHHHHHHHHh
Confidence 9999999999999999998764
No 28
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.82 E-value=1.6e-20 Score=187.46 Aligned_cols=195 Identities=31% Similarity=0.493 Sum_probs=133.4
Q ss_pred CcCcceEEEec-----CCceeeeEEechhhh-hhhhhHHHHHHHHHh--------------------hhhhcCCCCCchh
Q 041082 408 GFGSIYKARIQ-----DGMKVAVKVFDLQYE-RAFKSFDVACDMMKK--------------------LVLEYMPHGSLEK 461 (639)
Q Consensus 408 g~g~vy~~~l~-----~g~~vavK~l~~~~~-~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~ 461 (639)
.||.||++.+. .+..|+||.+..... .....|..+++.++. +|+||+++|+|.+
T Consensus 11 ~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~ 90 (259)
T PF07714_consen 11 SFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDD 90 (259)
T ss_dssp SSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHH
T ss_pred CCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccccccccc
Confidence 47899999987 257899999955332 235677777766432 6899999999999
Q ss_pred ccccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------c
Q 041082 462 CLYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------F 533 (639)
Q Consensus 462 ~l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------~ 533 (639)
+++.. ...++|.++.+|+.+||+||+||| ..+++||+|+++||++++++.+||+|||+++........ .
T Consensus 91 ~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~ 167 (259)
T PF07714_consen 91 YLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQL 167 (259)
T ss_dssp HHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSES
T ss_pred cccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99875 567999999999999999999999 557999999999999999999999999999876321110 0
Q ss_pred ------c----ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch
Q 041082 534 ------T----QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 534 ------~----~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
+ ....+.++||| | | |+.|..+. .-.++......... ...+
T Consensus 168 ~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~~~~---------------~~~~ 227 (259)
T PF07714_consen 168 PLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQGQR---------------LPIP 227 (259)
T ss_dssp GGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHTTEE---------------TTSB
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccc---------------ceec
Confidence 0 01123478888 6 5 45554321 22222222211110 0111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
..+...+.+++.+||+.+|++||+|.+++++|
T Consensus 228 ~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 228 DNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 22344677899999999999999999999876
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.82 E-value=4.6e-20 Score=191.41 Aligned_cols=201 Identities=22% Similarity=0.334 Sum_probs=142.8
Q ss_pred CcCcceEEEecCC----ce-eeeEEechhh---hhhhhhHHHHHHHHHh--------------------hhhhcCCCCCc
Q 041082 408 GFGSIYKARIQDG----MK-VAVKVFDLQY---ERAFKSFDVACDMMKK--------------------LVLEYMPHGSL 459 (639)
Q Consensus 408 g~g~vy~~~l~~g----~~-vavK~l~~~~---~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL 459 (639)
.||.||+|.+... .. ||+|....+. ......|-.|.+.|+. +|+|++.+|+|
T Consensus 169 aFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL 248 (474)
T KOG0194|consen 169 AFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSL 248 (474)
T ss_pred cccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcH
Confidence 4899999998543 22 8999877522 4456678788877653 68999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------ 533 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------ 533 (639)
.++|......++..++++++.++|+||+||| +..++||||-++|+|++.+..+||+|||+++.-..-....
T Consensus 249 ~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klP 325 (474)
T KOG0194|consen 249 DDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLP 325 (474)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCc
Confidence 9999876557999999999999999999999 7889999999999999999999999999998653111100
Q ss_pred -----cc----cccccccccc--c--------CCCCCCCccCCCccchHHHH-HhhCCCCcceeeeccccccccccccch
Q 041082 534 -----TQ----NTNTCHHRIY--G--------TRRNPQMNFFSGEMTLKSWV-NDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 534 -----~~----~~~~~~~dvy--G--------tg~~p~~~~~~~~~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
+. ..-+.+.||| | .|..|+... ....+..|+ ....+. ..+
T Consensus 326 irWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~--~~~~v~~kI~~~~~r~------------------~~~ 385 (474)
T KOG0194|consen 326 IRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM--KNYEVKAKIVKNGYRM------------------PIP 385 (474)
T ss_pred ceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC--CHHHHHHHHHhcCccC------------------CCC
Confidence 00 1223478887 6 355555421 111222232 111111 111
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
......+..++.+||..+|++||+|.+|++.++.+...
T Consensus 386 ~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 386 SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 12233455566699999999999999999999988654
No 30
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.81 E-value=7.2e-20 Score=185.46 Aligned_cols=214 Identities=23% Similarity=0.378 Sum_probs=138.1
Q ss_pred CCcCcceEEEec-----CCceeeeEEechhhhhhhhhHHHHHHHHH----------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ-----DGMKVAVKVFDLQYERAFKSFDVACDMMK----------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~-----~g~~vavK~l~~~~~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+++|.+........+.+..|++.++ .+|+||+++|+|
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L 94 (284)
T cd05081 15 GNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSL 94 (284)
T ss_pred CCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCH
Confidence 468899988742 46789999987655444556666665532 268999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--cc--
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF--TQ-- 535 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~--~~-- 535 (639)
.+++......++|.++..++.+++.||+||| ..+++||||||+||++++++.+|++|||+++......... ..
T Consensus 95 ~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 171 (284)
T cd05081 95 RDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPG 171 (284)
T ss_pred HHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCC
Confidence 9998765556899999999999999999999 6789999999999999999999999999998764322110 00
Q ss_pred --------------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccc--cccccc
Q 041082 536 --------------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLS--MEDKYF 590 (639)
Q Consensus 536 --------------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~--~~~~~~ 590 (639)
...+.++|+| | +|..+..... ..|................+.. ......
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd05081 172 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP------AEFMRMMGNDKQGQMIVYHLIELLKNNGRL 245 (284)
T ss_pred CCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc------hhhhhhcccccccccchHHHHHHHhcCCcC
Confidence 0112245666 4 3332221100 0011100000000000000000 000000
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 591 TTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 591 ~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
.....+...+.+++.+|++.+|++||||.||+++|+.++
T Consensus 246 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 246 PAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 011223456888999999999999999999999998763
No 31
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.81 E-value=3.9e-20 Score=188.43 Aligned_cols=217 Identities=19% Similarity=0.281 Sum_probs=149.3
Q ss_pred cCcceEEEecCCceeeeEEechhhhh-hhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccccCC
Q 041082 409 FGSIYKARIQDGMKVAVKVFDLQYER-AFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYSSN 467 (639)
Q Consensus 409 ~g~vy~~~l~~g~~vavK~l~~~~~~-~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~~~ 467 (639)
||.|..+...++..||||.++...+. ...+|..|++.+.. +|+|||++|+|.+++.++.
T Consensus 551 FGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ahe 630 (807)
T KOG1094|consen 551 FGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHE 630 (807)
T ss_pred cceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhcc
Confidence 78888888888899999999766543 35788888888532 6899999999999887643
Q ss_pred -ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc--ccccccccc
Q 041082 468 -YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ--NTNTCHHRI 544 (639)
Q Consensus 468 -~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~--~~~~~~~dv 544 (639)
...+-.+.++||.|||.||+||. +.++||||+.++|+|+|+++++||+|||++|-+-+.++.... .+-..++-.
T Consensus 631 apt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwma 707 (807)
T KOG1094|consen 631 LPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMA 707 (807)
T ss_pred CcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehh
Confidence 22455667889999999999999 788999999999999999999999999999977665543111 000001111
Q ss_pred c-c--CCC-CCCCccCCCccchHHHHHhhCCCCcceeeecccc-------cc--ccccccchHHHHHHHHHHHhhccCCC
Q 041082 545 Y-G--TRR-NPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLL-------SM--EDKYFTTKKQCLSFVFNLAMECTAES 611 (639)
Q Consensus 545 y-G--tg~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~-------~~--~~~~~~~~~~~~~~~~~l~~~C~~~~ 611 (639)
| . -|| .-.+|++..|+.+|+.........-.++-|..+. .. .......+..|...+++++++||..+
T Consensus 708 wEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~e 787 (807)
T KOG1094|consen 708 WESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRE 787 (807)
T ss_pred HHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchh
Confidence 1 0 111 1223344455556555433332211111111110 00 01123446778999999999999999
Q ss_pred CCCCCCHHHHHHHHHHh
Q 041082 612 PKQRINAKESVTRLLKI 628 (639)
Q Consensus 612 p~~RP~m~~v~~~l~~~ 628 (639)
.++||++.++...|++.
T Consensus 788 s~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 788 SEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhcCCCHHHHHHHHHHh
Confidence 99999999999988764
No 32
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2.2e-20 Score=186.62 Aligned_cols=119 Identities=26% Similarity=0.370 Sum_probs=95.0
Q ss_pred CCcCcceEEE-ecCCceeeeEEechhhhhhhhh-HHHHHHHH----------------------HhhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKAR-IQDGMKVAVKVFDLQYERAFKS-FDVACDMM----------------------KKLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~-f~~e~~~~----------------------~~Lv~ey~~~gsL~~~ 462 (639)
..||.||++. ...|..||||++.......... -.+|+..+ -++|+|||+- +|+++
T Consensus 21 GTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqL 99 (538)
T KOG0661|consen 21 GTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQL 99 (538)
T ss_pred CcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHH
Confidence 3489999998 4568899999876443221110 01222221 1378999986 89999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
+.+..+.++.....+|+.||.+||+|+| ..++.|||+||+|||+.....+||+|||+||-+.+.
T Consensus 100 mK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 100 MKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred HhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccC
Confidence 9888888999999999999999999999 889999999999999999999999999999987654
No 33
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.81 E-value=7.6e-20 Score=203.31 Aligned_cols=165 Identities=30% Similarity=0.406 Sum_probs=117.1
Q ss_pred eecCCCCCcEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCC
Q 041082 45 VSCDVRSYRVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLA 124 (639)
Q Consensus 45 v~c~~~~~~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 124 (639)
..|-. .+.+.|++++++++. +|..+. ++|+.|+|++|.++ .+|..+. ++|+.|++++|+++ .+|..+. +
T Consensus 173 ~~Cl~--~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~ 241 (754)
T PRK15370 173 RDCLK--NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--D 241 (754)
T ss_pred Hhhcc--cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--c
Confidence 35643 357889999999984 676665 58999999999999 5787665 58999999999998 4676654 4
Q ss_pred CCcEEecccccCccccCccccCCCCCCEEecCCCCCCCCC---CCCccEEEccCCccCccCCccccCCCCCcEEEcccCC
Q 041082 125 ELETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ---IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNS 201 (639)
Q Consensus 125 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 201 (639)
+|+.|+|++|++. .+|..+. .+|+.|+|++|+|+.++ .++|+.|+|++|++++ +|..+. ++|+.|++++|.
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~ 315 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNS 315 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccCccccccCCCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCc
Confidence 7999999999998 5676654 47888888888887643 2367777777777764 343322 356666666666
Q ss_pred CcccCccccCCCCCCCEEEccCCCCCCC
Q 041082 202 FFDLIPNTFGNLINLKRLNLYDNYLTSS 229 (639)
Q Consensus 202 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 229 (639)
+..+ |..+ .++|+.|++++|.+++.
T Consensus 316 Lt~L-P~~l--~~sL~~L~Ls~N~Lt~L 340 (754)
T PRK15370 316 LTAL-PETL--PPGLKTLEAGENALTSL 340 (754)
T ss_pred cccC-Cccc--cccceeccccCCccccC
Confidence 6543 3222 24566666666666543
No 34
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.81 E-value=9.2e-20 Score=186.66 Aligned_cols=204 Identities=21% Similarity=0.326 Sum_probs=132.1
Q ss_pred CCcCcceEEEecC-----------------CceeeeEEechhhh-hhhhhHHHHHHHHH--------------------h
Q 041082 407 SGFGSIYKARIQD-----------------GMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------K 448 (639)
Q Consensus 407 ~g~g~vy~~~l~~-----------------g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~ 448 (639)
.++|.||++...+ +..+|+|.+..... .....|..|++.++ .
T Consensus 16 G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (304)
T cd05096 16 GQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLC 95 (304)
T ss_pred cCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceE
Confidence 5688999887532 34699998865422 23446667776643 3
Q ss_pred hhhhcCCCCCchhccccC------------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeec
Q 041082 449 LVLEYMPHGSLEKCLYSS------------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLG 510 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~------------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~ 510 (639)
+|+||+++|+|.+++... ...++|....+++.++|+||+||| ..+|+||||||+||+++
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH~dlkp~Nill~ 172 (304)
T cd05096 96 MITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVG 172 (304)
T ss_pred EEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccccCcchhheEEc
Confidence 689999999999877431 124788899999999999999999 66799999999999999
Q ss_pred CCcceeeccccccccccccCCC---c----------cc----cccccccccc--c---------CCCCCCCccCCCccch
Q 041082 511 NNMVAHLSDFGMAKLLLKEDQS---F----------TQ----NTNTCHHRIY--G---------TRRNPQMNFFSGEMTL 562 (639)
Q Consensus 511 ~~~~~~i~dfgla~~~~~~~~~---~----------~~----~~~~~~~dvy--G---------tg~~p~~~~~~~~~~l 562 (639)
.++.+||+|||+++.+...... . +. ...+.++||| | ++..|.... .....
T Consensus 173 ~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~--~~~~~ 250 (304)
T cd05096 173 ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGEL--TDEQV 250 (304)
T ss_pred CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcC--CHHHH
Confidence 9999999999999865332210 0 00 0112255666 4 133333211 01111
Q ss_pred HHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 563 KSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 563 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
.+++............. ..+..+...+.+++.+|++.+|++||+|.||++.|+
T Consensus 251 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 251 IENAGEFFRDQGRQVYL-----------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHhhhccccccc-----------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 12221111111000000 011223456788999999999999999999998886
No 35
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.81 E-value=5.2e-20 Score=183.82 Aligned_cols=118 Identities=34% Similarity=0.455 Sum_probs=98.5
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------------~Lv~ey~~~gsL~ 460 (639)
.+||.||||.+.+ +.||||++.....+ +|..|.++.+ -||.+|.++|||.
T Consensus 221 Grfg~V~KaqL~~-~~VAVKifp~~~kq---s~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~ 296 (534)
T KOG3653|consen 221 GRFGCVWKAQLDN-RLVAVKIFPEQEKQ---SFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLC 296 (534)
T ss_pred CccceeehhhccC-ceeEEEecCHHHHH---HHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHH
Confidence 4689999999974 89999999865443 4444444411 2789999999999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhc------cCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHF------GYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~------~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
++|.. ..++|....+||.-+|+||+|||+ +..|+|+|||||++|||+..|+.+.|+|||||..+..+.
T Consensus 297 dyL~~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~ 370 (534)
T KOG3653|consen 297 DYLKA--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGK 370 (534)
T ss_pred HHHHh--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCC
Confidence 99964 568999999999999999999995 446899999999999999999999999999998876543
No 36
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.80 E-value=1e-19 Score=187.41 Aligned_cols=201 Identities=22% Similarity=0.337 Sum_probs=136.2
Q ss_pred CCcCcceEEEec-CCc----eeeeEEechhh-hhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGM----KVAVKVFDLQY-ERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~----~vavK~l~~~~-~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+. .+|+|.+.... ......+..|+..++ .++++|+++|+|.+
T Consensus 18 G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e~~~~g~l~~ 97 (316)
T cd05108 18 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLD 97 (316)
T ss_pred CCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeeecCCCCCHHH
Confidence 458899999864 333 38999886432 223345555655533 26789999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ------ 535 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~------ 535 (639)
++......+++....+++.++|+||+||| +.+|+||||||+||+++.++.+||+|||+++.+.........
T Consensus 98 ~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 174 (316)
T cd05108 98 YVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVP 174 (316)
T ss_pred HHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccc
Confidence 98765556899999999999999999999 678999999999999999999999999999876533211000
Q ss_pred -----------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 536 -----------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 536 -----------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
...+.++||| | | |+.|.++. ...++.... .. .. ....+.
T Consensus 175 ~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~-----~~~~~~~~~-~~--------~~------~~~~~~ 234 (316)
T cd05108 175 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-----PASEISSIL-EK--------GE------RLPQPP 234 (316)
T ss_pred eeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH-hC--------CC------CCCCCC
Confidence 0111245665 4 3 44444321 111111000 00 00 001112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
.+...+.+++..|++.+|++||+|.+++..+..+..
T Consensus 235 ~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 235 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 234567889999999999999999999999887754
No 37
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=2.1e-19 Score=178.23 Aligned_cols=207 Identities=26% Similarity=0.328 Sum_probs=145.5
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHH--------------------------HhhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMM--------------------------KKLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~--------------------------~~Lv~ey~~~gsL~ 460 (639)
..||.||+|.++ |..||||+|....+. ++.+|.++. -.||.+|-++|||+
T Consensus 222 GRyGEVwrG~wr-Ge~VAVKiF~srdE~---SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~ 297 (513)
T KOG2052|consen 222 GRFGEVWRGRWR-GEDVAVKIFSSRDER---SWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLY 297 (513)
T ss_pred ccccceeecccc-CCceEEEEecccchh---hhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHH
Confidence 358999999998 568999999754433 333333331 12789999999999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhc-----cCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHF-----GYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-- 533 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~-----~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-- 533 (639)
++|.. ..++-..-+++|.-+|.||++||. ...|.|.||||||.|||+.+++.+.|+|+|||....++....
T Consensus 298 DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi 375 (513)
T KOG2052|consen 298 DYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDI 375 (513)
T ss_pred HHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccC
Confidence 99965 568999999999999999999994 557999999999999999999999999999997654432210
Q ss_pred --ccccccc---------------------ccccccCCCCCCCccCCCccchHHHHHhhC----------------CC--
Q 041082 534 --TQNTNTC---------------------HHRIYGTRRNPQMNFFSGEMTLKSWVNDLL----------------PI-- 572 (639)
Q Consensus 534 --~~~~~~~---------------------~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~----------------~~-- 572 (639)
...++|. .+||| +.|..+|+-++... |.
T Consensus 376 ~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIY-----------afgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 376 PPNPRVGTKRYMAPEVLDETINMKHFESYKRADIY-----------AFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred CCCCccceeeccChHHhhhhcChhhhhhhhHHHHH-----------HHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 0111111 45666 22222222222211 11
Q ss_pred ---CcceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 573 ---SVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 573 ---~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
++.++|-.+-..+...+.+...+++..+.+++..||..+|+.|-|+-.|-+.|.++..
T Consensus 445 s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1233332222222222344557889999999999999999999999999999988854
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.80 E-value=2.7e-19 Score=188.45 Aligned_cols=200 Identities=20% Similarity=0.296 Sum_probs=132.1
Q ss_pred CCcCcceEEEe------cCCceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARI------QDGMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l------~~g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gs 458 (639)
.+||.||++.. ..+..+|||++.... ......+..|+.+++ .+||||+++|+
T Consensus 46 G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~ 125 (375)
T cd05104 46 GAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGD 125 (375)
T ss_pred CccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCc
Confidence 46899999864 235689999986432 122334555665532 36899999999
Q ss_pred chhccccC------------------------------------------------------------------------
Q 041082 459 LEKCLYSS------------------------------------------------------------------------ 466 (639)
Q Consensus 459 L~~~l~~~------------------------------------------------------------------------ 466 (639)
|.+++...
T Consensus 126 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (375)
T cd05104 126 LLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILE 205 (375)
T ss_pred HHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHh
Confidence 98877531
Q ss_pred --CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc---c-------
Q 041082 467 --NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---T------- 534 (639)
Q Consensus 467 --~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---~------- 534 (639)
...++|....+++.++|+||+||| ..+|+||||||.||+++.+..+|++|||+++......... .
T Consensus 206 ~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 282 (375)
T cd05104 206 EDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKW 282 (375)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcce
Confidence 124789999999999999999999 6789999999999999999999999999998654322110 0
Q ss_pred -------ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHH
Q 041082 535 -------QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCL 597 (639)
Q Consensus 535 -------~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 597 (639)
....+.++||| | | |..|..... .......++..... . ..+....
T Consensus 283 ~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~-~~~~~~~~~~~~~~-----~-------------~~~~~~~ 343 (375)
T cd05104 283 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP-VDSKFYKMIKEGYR-----M-------------LSPECAP 343 (375)
T ss_pred eChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC-chHHHHHHHHhCcc-----C-------------CCCCCCC
Confidence 00112256666 4 3 444443211 11111222111100 0 0011122
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 598 SFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 598 ~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
..+.+++..|++.+|++||+|.||+++|++.
T Consensus 344 ~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 344 SEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 3577899999999999999999999999863
No 39
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.80 E-value=1.5e-19 Score=180.19 Aligned_cols=195 Identities=23% Similarity=0.326 Sum_probs=135.1
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.||++...++..+++|.+..... ....+..|+..++ .+||||+++|+|.++++..
T Consensus 15 G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~ 93 (256)
T cd05114 15 GQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQR 93 (256)
T ss_pred CcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhC
Confidence 568899999988888899998753322 2345556665533 2689999999999988754
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------------c
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------------T 534 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------------~ 534 (639)
...++|..+..++.+++.||+||| ..+++||||||+||++++++.+|++|||+++......... +
T Consensus 94 ~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aP 170 (256)
T cd05114 94 QGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPP 170 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCCh
Confidence 446899999999999999999999 6789999999999999999999999999987653221110 0
Q ss_pred c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++|+| | | |+.|.... .......++.. .. ....+ ......+
T Consensus 171 E~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~--~~~~~~~~i~~---~~--~~~~~-------------~~~~~~~ 230 (256)
T cd05114 171 EVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK--SNYEVVEMISR---GF--RLYRP-------------KLASMTV 230 (256)
T ss_pred hhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHC---CC--CCCCC-------------CCCCHHH
Confidence 0 0112356777 5 4 55554321 11111122111 00 00011 1112357
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
.+++.+|++.+|++||+|.++++.|
T Consensus 231 ~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 231 YEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHHccCCcccCcCHHHHHHhh
Confidence 8899999999999999999999886
No 40
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.80 E-value=3.3e-19 Score=165.69 Aligned_cols=199 Identities=25% Similarity=0.379 Sum_probs=140.1
Q ss_pred CcCcceEEEe-cCCceeeeEEechhhhhh--hhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARI-QDGMKVAVKVFDLQYERA--FKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l-~~g~~vavK~l~~~~~~~--~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.+|.||++.- ..|+.||+|++....... -.+..+|++.++ .||+|||+. +|+..++
T Consensus 14 ~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t-dLe~vIk 92 (318)
T KOG0659|consen 14 TYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT-DLEVVIK 92 (318)
T ss_pred ceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc-cHHHHhc
Confidence 4788999974 568999999998764321 122334444422 268999986 8999998
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcccccccc----
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTC---- 540 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~---- 540 (639)
.+...+.-.+...++.++.+|++|+| ..-|+||||||.|+|++.++..|++|||+|+...+.....++.+.|.
T Consensus 93 d~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRA 169 (318)
T KOG0659|consen 93 DKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRA 169 (318)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccC
Confidence 87788999999999999999999999 67799999999999999999999999999999876543322212111
Q ss_pred ------------ccccc--c---------------------------CCCCCCCccCCCccchHHHHHhh-CCCCcceee
Q 041082 541 ------------HHRIY--G---------------------------TRRNPQMNFFSGEMTLKSWVNDL-LPISVMEVV 578 (639)
Q Consensus 541 ------------~~dvy--G---------------------------tg~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~ 578 (639)
..|+| | +=..|..+.+.+-..|+++++.. +|....+.+
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l 249 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL 249 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence 34555 4 11124445555555566665443 333211111
Q ss_pred eccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 579 DVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 579 d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
...+...++++....+..+|.+|.+++|++++
T Consensus 250 --------------f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 250 --------------FPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred --------------cccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11233445888889999999999999999864
No 41
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.80 E-value=1.5e-19 Score=180.69 Aligned_cols=199 Identities=23% Similarity=0.394 Sum_probs=140.6
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc-
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS- 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~- 465 (639)
.++|.||++...++..+++|.+..........+..++..++ .+|+||+++|+|.+++..
T Consensus 17 g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 96 (261)
T cd05148 17 GYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSP 96 (261)
T ss_pred CCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcC
Confidence 46889999998889999999987655444455666665532 268999999999999875
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-----------
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT----------- 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~----------- 534 (639)
....++|.++.+++.+++.|++||| ..+++|||||++||++++++.+|++|||++...........
T Consensus 97 ~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~P 173 (261)
T cd05148 97 EGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAP 173 (261)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCH
Confidence 3356899999999999999999999 66799999999999999999999999999976643221100
Q ss_pred c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++|+| | + |+.|.... ......+++..... ...+..+...+
T Consensus 174 E~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~--~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 233 (261)
T cd05148 174 EAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGM--NNHEVYDQITAGYR------------------MPCPAKCPQEI 233 (261)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcC--CHHHHHHHHHhCCc------------------CCCCCCCCHHH
Confidence 0 0112256777 5 4 55555321 11111111110000 00112334467
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+++.+|++.+|++||||.++++.|+.+
T Consensus 234 ~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 234 YKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 7899999999999999999999999753
No 42
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.80 E-value=4.6e-19 Score=179.39 Aligned_cols=210 Identities=21% Similarity=0.368 Sum_probs=141.8
Q ss_pred CCcCcceEEEec-----CCceeeeEEechhhhh-hhhhHHHHHHHHH----------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-----DGMKVAVKVFDLQYER-AFKSFDVACDMMK----------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-----~g~~vavK~l~~~~~~-~~~~f~~e~~~~~----------------------~Lv~ey~~~gs 458 (639)
+++|.||++... .+..+|+|.+...... ....|..+++.++ .+++||+++|+
T Consensus 15 g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 94 (284)
T cd05038 15 GHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGS 94 (284)
T ss_pred CCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCC
Confidence 468899999864 3578999998755432 3456666665532 26789999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC------
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------ 532 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------ 532 (639)
|.+++......++|.++..++.+++.||+||| ..+++||||||+||+++.++.++++|||+++........
T Consensus 95 l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 171 (284)
T cd05038 95 LRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEP 171 (284)
T ss_pred HHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCC
Confidence 99998765556999999999999999999999 668999999999999999999999999999876522110
Q ss_pred --------ccc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC----cceeeecccccccc
Q 041082 533 --------FTQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS----VMEVVDVNLLSMED 587 (639)
Q Consensus 533 --------~~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~~d~~l~~~~~ 587 (639)
.+. ...+.++|+| | ||+.|.......... ++....... ..+.+.....
T Consensus 172 ~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---- 244 (284)
T cd05038 172 GESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLLELLKEGER---- 244 (284)
T ss_pred CCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHHHHHHcCCc----
Confidence 000 1122367888 6 677665432111100 000000000 0000000000
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 588 KYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
...+..+...+.+++.+|++.+|++||+|.||+++|+.+
T Consensus 245 --~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 245 --LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred --CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 011223446788999999999999999999999999876
No 43
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.80 E-value=2.4e-21 Score=188.99 Aligned_cols=306 Identities=25% Similarity=0.240 Sum_probs=212.1
Q ss_pred EeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEeccc-ccC
Q 041082 58 NISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQN-NFL 136 (639)
Q Consensus 58 ~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l 136 (639)
+-++.+++ .+|..+. ..-..++|..|.|+...|.+|..+++|+.||||+|+|+.+-|+.|.++++|..|-+.+ |+|
T Consensus 52 dCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 34444555 4666555 3557888999999987778889999999999999999988899999999888877666 888
Q ss_pred ccccCccccCCCCCCEEecCCCCCCCCCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCC
Q 041082 137 TGTIHSSIFNLSSLSDLDLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINL 216 (639)
Q Consensus 137 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 216 (639)
+....+.|++|..|+.|.+.-|++. ......|..+++|..|.+.+|.+..+.-..|..+..+
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~------------------Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i 190 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHIN------------------CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAI 190 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhc------------------chhHHHHHHhhhcchhcccchhhhhhccccccchhcc
Confidence 8666667888777777666666554 4456677788888899999998876655688999999
Q ss_pred CEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCcccccccc-
Q 041082 217 KRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLC- 295 (639)
Q Consensus 217 ~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 295 (639)
+.+.+..|.+-.. .+++.+... +. ..|.+++...-..-..+.++++...-+.-|.
T Consensus 191 ~tlhlA~np~icd----------CnL~wla~~---~a-----------~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c 246 (498)
T KOG4237|consen 191 KTLHLAQNPFICD----------CNLPWLADD---LA-----------MNPIETSGARCVSPYRLYYKRINQEDARKFLC 246 (498)
T ss_pred chHhhhcCccccc----------cccchhhhH---Hh-----------hchhhcccceecchHHHHHHHhcccchhhhhh
Confidence 9999988875432 111111100 00 0111222222222223333333322222221
Q ss_pred CCcCCcE-EEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCEEeCCCCcCcccchhhhhcCCCCcE
Q 041082 296 KLQKLQL-LSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRILSLDSNKLISIIPSTLWNLKDILY 374 (639)
Q Consensus 296 ~l~~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 374 (639)
.+..+.. +....+.....+...|..+++|+.|+|++|+++++-+.+|.++..++.|.|..|++..+-...|.++..|+.
T Consensus 247 ~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~t 326 (498)
T KOG4237|consen 247 SLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKT 326 (498)
T ss_pred hHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhcccccee
Confidence 1112211 111122222233356888999999999999999888999999999999999999998888888889999999
Q ss_pred EEcccCCCCCCCccccccccccccccccCCCCCC
Q 041082 375 LNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSG 408 (639)
Q Consensus 375 L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 408 (639)
|+|.+|+++...|..|..+..|..|++-.|+|-.
T Consensus 327 L~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 327 LSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred eeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 9999999988889999999999999888888754
No 44
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.80 E-value=2.2e-19 Score=179.08 Aligned_cols=199 Identities=23% Similarity=0.372 Sum_probs=135.9
Q ss_pred CCcCcceEEEec---CCceeeeEEechhhhh-hhhhHHHHHHHHH-------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ---DGMKVAVKVFDLQYER-AFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~---~g~~vavK~l~~~~~~-~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++... .+..+|+|.+...... ....+..|+..++ .+|+||+++|+|.+++
T Consensus 6 G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l 85 (257)
T cd05115 6 GNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPLNKFL 85 (257)
T ss_pred CCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCHHHHH
Confidence 467899998764 3456899988654322 2345666666543 2689999999999988
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc---cc-----
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---TQ----- 535 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---~~----- 535 (639)
......+++.++.+++.++++|++||| ..+++||||||+||+++.+..+|++|||+++......... ..
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 162 (257)
T cd05115 86 SGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPL 162 (257)
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCc
Confidence 755556899999999999999999999 5689999999999999999999999999998654332110 00
Q ss_pred ----------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 536 ----------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 536 ----------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
...+.++||| | + |+.|..+.. ......++.... ....+..
T Consensus 163 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~------------------~~~~~~~ 222 (257)
T cd05115 163 KWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--GPEVMSFIEQGK------------------RLDCPAE 222 (257)
T ss_pred ccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHHCCC------------------CCCCCCC
Confidence 0112245666 4 2 555543210 111111111100 0011122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
+...+.+++.+|++.+|++||+|.+|.+.|+.+
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 345677899999999999999999999999865
No 45
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.79 E-value=1.7e-19 Score=182.56 Aligned_cols=212 Identities=23% Similarity=0.346 Sum_probs=138.4
Q ss_pred CCcCcceEEEe-----cCCceeeeEEechhhh-hhhhhHHHHHHHHH----------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-----QDGMKVAVKVFDLQYE-RAFKSFDVACDMMK----------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-----~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~----------------------~Lv~ey~~~gs 458 (639)
.++|.||.+.. .++..+|+|.+..... .....|..|++.++ .+++||+++|+
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~ 94 (283)
T cd05080 15 GHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGS 94 (283)
T ss_pred CCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCC
Confidence 45788876542 3567899999865432 22345556665532 26889999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC------
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------ 532 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------ 532 (639)
|.+++... .++|.++..++.++++|++||| ..+|+||||||+||+++.++.++++|||+++........
T Consensus 95 l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 169 (283)
T cd05080 95 LRDYLPKH--KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 169 (283)
T ss_pred HHHHHHHc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCC
Confidence 99988643 4899999999999999999999 668999999999999999999999999999866432210
Q ss_pred --------cc----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCC-CCcceeeeccccccccccc
Q 041082 533 --------FT----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLP-ISVMEVVDVNLLSMEDKYF 590 (639)
Q Consensus 533 --------~~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~~ 590 (639)
.+ ....+.++||| | ||+.|.......-..+..+...... ....+.++.....
T Consensus 170 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 243 (283)
T cd05080 170 GDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL------ 243 (283)
T ss_pred CCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC------
Confidence 00 01122367787 6 6776654321110001000000000 0011111111110
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 591 TTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 591 ~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
..+..+...+.+++..|++.+|++||+|.+|+++|+++.
T Consensus 244 ~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 244 PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 112234567888999999999999999999999998874
No 46
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.79 E-value=1.7e-19 Score=180.82 Aligned_cols=199 Identities=18% Similarity=0.274 Sum_probs=136.0
Q ss_pred CCcCcceEEEec----CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ----DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~----~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~ 461 (639)
.+||.||++.+. .+..+|+|.+..... .....|..|+..++ .+||||+++|+|.+
T Consensus 16 G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (266)
T cd05064 16 GRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDS 95 (266)
T ss_pred cCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHH
Confidence 458999998763 356899998865422 22345566666533 37899999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT------- 534 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~------- 534 (639)
++......++|.++.+++.+++.|++||| ..+++||||||+||+++.++.++++|||.+...........
T Consensus 96 ~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 172 (266)
T cd05064 96 FLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPV 172 (266)
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCce
Confidence 98764456899999999999999999999 67899999999999999999999999998765322110000
Q ss_pred ---------ccccccccccc--c--------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 535 ---------QNTNTCHHRIY--G--------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 535 ---------~~~~~~~~dvy--G--------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
....+.++||| | +|+.|..+.. ...+.+.+. +.. ....+..
T Consensus 173 ~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--~~~~~~~~~----~~~--------------~~~~~~~ 232 (266)
T cd05064 173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--GQDVIKAVE----DGF--------------RLPAPRN 232 (266)
T ss_pred eecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHH----CCC--------------CCCCCCC
Confidence 00112256666 4 3555553210 111111111 000 0011233
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
+...+.+++..||+.+|++||+|.++.+.|+++
T Consensus 233 ~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 233 CPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 455688899999999999999999999998754
No 47
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=8.2e-19 Score=176.73 Aligned_cols=119 Identities=33% Similarity=0.449 Sum_probs=101.5
Q ss_pred CcCcceEEE-ecCCceeeeEEechhhh--hhhhhHHHHHHHHH----------------------hhhhhcCCCCCchhc
Q 041082 408 GFGSIYKAR-IQDGMKVAVKVFDLQYE--RAFKSFDVACDMMK----------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 408 g~g~vy~~~-l~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~~ 462 (639)
.||.||++. ...|..||+|++.+... +......+|+.+++ +||+|||++ +|..+
T Consensus 129 Tyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GL 207 (560)
T KOG0600|consen 129 TYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGL 207 (560)
T ss_pred chhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhh
Confidence 488999997 56789999999988763 33344456777744 378999987 89888
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
+......++..+...+..|+..||+|+| ..+|+|||||.+|||+|.++..||+|||||+++....
T Consensus 208 l~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 208 LSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred hcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 8876677999999999999999999999 7889999999999999999999999999999887654
No 48
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.79 E-value=4.3e-19 Score=191.11 Aligned_cols=217 Identities=24% Similarity=0.293 Sum_probs=155.2
Q ss_pred CCcCcceEEEecCC-ceeeeEEechhhhhhhhhHHHHHHHHHh----------------------------hhhhcCCCC
Q 041082 407 SGFGSIYKARIQDG-MKVAVKVFDLQYERAFKSFDVACDMMKK----------------------------LVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l~~g-~~vavK~l~~~~~~~~~~f~~e~~~~~~----------------------------Lv~ey~~~g 457 (639)
.||..||.+....+ ..+|+|++-............|+++||. |.|||+++|
T Consensus 48 GGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg 127 (738)
T KOG1989|consen 48 GGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGG 127 (738)
T ss_pred CCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCC
Confidence 68999999998766 9999999877777778888899988764 569999999
Q ss_pred Cchhcccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc--cccCCC--
Q 041082 458 SLEKCLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL--LKEDQS-- 532 (639)
Q Consensus 458 sL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~--~~~~~~-- 532 (639)
+|-+++.. ....|+....++|+.++++|+++|| .+.|||||||||.+|||+..++.-|+||||=|--. ......
T Consensus 128 ~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH-~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~ 206 (738)
T KOG1989|consen 128 SLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH-YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEV 206 (738)
T ss_pred cHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh-cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHH
Confidence 99998864 1234899999999999999999999 67899999999999999999999999999966422 211100
Q ss_pred -----------ccccccccccccc-cCCCCCCCccCCCccchHHHHHhhCCCC---cceeeeccccccccccccchHHHH
Q 041082 533 -----------FTQNTNTCHHRIY-GTRRNPQMNFFSGEMTLKSWVNDLLPIS---VMEVVDVNLLSMEDKYFTTKKQCL 597 (639)
Q Consensus 533 -----------~~~~~~~~~~dvy-Gtg~~p~~~~~~~~~~l~~~~~~~~~~~---~~~~~d~~l~~~~~~~~~~~~~~~ 597 (639)
....++-.-.|+| |-+-.++.|+|.-|..|-.......|.+ -..+++.+-.- ...+...
T Consensus 207 ~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~------P~~p~ys 280 (738)
T KOG1989|consen 207 NYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSF------PPFPNYS 280 (738)
T ss_pred HHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccC------CCCccHH
Confidence 0011111246777 4322233343333333322222222322 23444443221 1224667
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 598 SFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 598 ~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
..+..|+..|++++|++||...+|++.+.++..
T Consensus 281 ~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 281 DRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred HHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 788999999999999999999999999988864
No 49
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.79 E-value=2.6e-19 Score=178.94 Aligned_cols=197 Identities=21% Similarity=0.354 Sum_probs=135.4
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc-
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS- 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~- 465 (639)
.++|.||++...++..+++|.+..... ....+..|...++ .+++||+++|+|.++++.
T Consensus 17 g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 95 (261)
T cd05072 17 GQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSD 95 (261)
T ss_pred cCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHh
Confidence 568899999988888899998764332 2345555655533 268999999999998865
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-cc---------
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-TQ--------- 535 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-~~--------- 535 (639)
....+++.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||+++......... ..
T Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a 172 (261)
T cd05072 96 EGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA 172 (261)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCC
Confidence 2346899999999999999999999 6789999999999999999999999999998664322110 00
Q ss_pred ------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 536 ------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 536 ------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
...+.++|+| | | |+.|.... ....+..++....+. +....+...
T Consensus 173 PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~------------------~~~~~~~~~ 232 (261)
T cd05072 173 PEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM--SNSDVMSALQRGYRM------------------PRMENCPDE 232 (261)
T ss_pred HHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC--CHHHHHHHHHcCCCC------------------CCCCCCCHH
Confidence 0011245666 4 4 44444311 011111111110000 001122345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
+.+++.+|+..+|++||+|.++.+.|++
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 233 LYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 7789999999999999999999999975
No 50
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=4.9e-19 Score=181.31 Aligned_cols=192 Identities=25% Similarity=0.318 Sum_probs=132.9
Q ss_pred cCcceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccccCC
Q 041082 409 FGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYSSN 467 (639)
Q Consensus 409 ~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~~~ 467 (639)
.|.||.+. ...++.||+|++++.......-...|+.+|+. .|||||++|+|.+.+..
T Consensus 286 SG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~-- 363 (550)
T KOG0578|consen 286 TGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK-- 363 (550)
T ss_pred ccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhc--
Confidence 57788876 45678999999998765544445556655432 58999999999998854
Q ss_pred ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcccccccc-------
Q 041082 468 YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTC------- 540 (639)
Q Consensus 468 ~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~------- 540 (639)
..++..+...|+.++.+||+||| ..+|+|||||+.|||++.++.+||+|||+...+.......+..++|.
T Consensus 364 ~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEV 440 (550)
T KOG0578|consen 364 TRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEV 440 (550)
T ss_pred ccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhh
Confidence 45899999999999999999999 78899999999999999999999999999988876553322233332
Q ss_pred --------ccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHH
Q 041082 541 --------HHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNL 603 (639)
Q Consensus 541 --------~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l 603 (639)
|.||| | .|..|+-. +.-....|.- ..+ --|.+.. ++-.-..+-+.
T Consensus 441 vtrk~YG~KVDIWSLGIMaIEMveGEPPYln---E~PlrAlyLI---a~n----g~P~lk~--------~~klS~~~kdF 502 (550)
T KOG0578|consen 441 VTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN---ENPLRALYLI---ATN----GTPKLKN--------PEKLSPELKDF 502 (550)
T ss_pred hhhcccCccccchhhhhHHHHHhcCCCCccC---CChHHHHHHH---hhc----CCCCcCC--------ccccCHHHHHH
Confidence 55666 4 45555431 1111111110 000 0111111 11122234456
Q ss_pred HhhccCCCCCCCCCHHHHHH
Q 041082 604 AMECTAESPKQRINAKESVT 623 (639)
Q Consensus 604 ~~~C~~~~p~~RP~m~~v~~ 623 (639)
..+|++.+|++||++.|.++
T Consensus 503 L~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 503 LDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHhhcchhcCCCHHHHhc
Confidence 66999999999999999985
No 51
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.79 E-value=3.8e-19 Score=177.78 Aligned_cols=200 Identities=25% Similarity=0.376 Sum_probs=136.0
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.||++...++..+++|.+..... ..+.+..|+..++ .+++||+++++|.+++...
T Consensus 17 g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~ 95 (261)
T cd05068 17 GQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGG 95 (261)
T ss_pred cCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhcc
Confidence 467899999887788899999865432 2345666665533 3689999999999998653
Q ss_pred -CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-----------
Q 041082 467 -NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT----------- 534 (639)
Q Consensus 467 -~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~----------- 534 (639)
...++|.+..+++.+++.|++||| ..+++||||||+||++++++.++++|||+++..........
T Consensus 96 ~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a 172 (261)
T cd05068 96 AGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTA 172 (261)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccC
Confidence 246899999999999999999999 66899999999999999999999999999987653221100
Q ss_pred -c----cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCCc------ceeeeccccccccccccchHHHHHHHHH
Q 041082 535 -Q----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPISV------MEVVDVNLLSMEDKYFTTKKQCLSFVFN 602 (639)
Q Consensus 535 -~----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~~------~~~~d~~l~~~~~~~~~~~~~~~~~~~~ 602 (639)
. ...+.++||| +-|..+.+++. ...|... ...++.... ...+..+...+.+
T Consensus 173 PE~~~~~~~~~~~Di~-----------slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 235 (261)
T cd05068 173 PEAALYNRFSIKSDVW-----------SFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR------MPCPPGCPKELYD 235 (261)
T ss_pred ccccccCCCCchhhHH-----------HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC------CCCCCcCCHHHHH
Confidence 0 0112245555 22333333322 1111100 000000000 0011223456788
Q ss_pred HHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 603 LAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 603 l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
++.+|++.+|++||+|.++++.|++
T Consensus 236 li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 236 IMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHhhcCcccCCCHHHHHHHHhc
Confidence 9999999999999999999999985
No 52
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.79 E-value=5.4e-19 Score=178.56 Aligned_cols=202 Identities=23% Similarity=0.331 Sum_probs=136.0
Q ss_pred CCcCcceEEEe-cCCc----eeeeEEechhhh-hhhhhHHHHHHHHH-------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARI-QDGM----KVAVKVFDLQYE-RAFKSFDVACDMMK-------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~----~vavK~l~~~~~-~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++.. ..+. .+|+|.+..... .....+..+...++ .++++|+++|+|.+
T Consensus 18 G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~~~~g~l~~ 97 (279)
T cd05109 18 GAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMPYGCLLD 97 (279)
T ss_pred CCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEcCCCCCHHH
Confidence 56889999985 3443 478998754321 22334444444322 26789999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--c------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--F------ 533 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--~------ 533 (639)
+++.....+++.....++.++++||+||| +.+|+||||||+||++++++.+|++|||+++.+...... .
T Consensus 98 ~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05109 98 YVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 174 (279)
T ss_pred HHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccc
Confidence 98765556899999999999999999999 678999999999999999999999999999876432211 0
Q ss_pred -----cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 534 -----TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 534 -----~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
+. ...+.++||| | | |..|.+.. ....+..++..... .+.+.
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~~~------------------~~~~~ 234 (279)
T cd05109 175 IKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI--PAREIPDLLEKGER------------------LPQPP 234 (279)
T ss_pred hhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHCCCc------------------CCCCc
Confidence 00 0112256666 4 4 55554321 11112222221100 00112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
.+...+.+++..|++.+|++||++.+++..++++...
T Consensus 235 ~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 235 ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 2344677899999999999999999999998877543
No 53
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.79 E-value=7.6e-19 Score=182.27 Aligned_cols=202 Identities=21% Similarity=0.334 Sum_probs=132.9
Q ss_pred CCcCcceEEEec------CCceeeeEEechhhh-hhhhhHHHHHHHHH----------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQYE-RAFKSFDVACDMMK----------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~~-~~~~~f~~e~~~~~----------------------~Lv~ey~~~g 457 (639)
.++|.||++... .+..+|+|++..... ...+.+..|+..++ .+++||+++|
T Consensus 18 G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~ 97 (337)
T cd05054 18 GAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFG 97 (337)
T ss_pred CcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCC
Confidence 568999988642 246899998864321 11233334443321 2568999999
Q ss_pred CchhccccC------------------------------------------------------------CccCCHHHHHH
Q 041082 458 SLEKCLYSS------------------------------------------------------------NYILDIFQRLN 477 (639)
Q Consensus 458 sL~~~l~~~------------------------------------------------------------~~~l~~~~~~~ 477 (639)
+|.+++... ...++|.++.+
T Consensus 98 ~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 177 (337)
T cd05054 98 NLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLIS 177 (337)
T ss_pred CHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHH
Confidence 998877431 12579999999
Q ss_pred HHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-------------c----cccccc
Q 041082 478 IMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------------T----QNTNTC 540 (639)
Q Consensus 478 i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------------~----~~~~~~ 540 (639)
++.+|++||+||| ..+|+||||||.||++++++.++|+|||+++.+....... + ....+.
T Consensus 178 ~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~ 254 (337)
T cd05054 178 YSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTT 254 (337)
T ss_pred HHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCc
Confidence 9999999999999 6789999999999999999999999999998764322110 0 011223
Q ss_pred ccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHHHhhccCC
Q 041082 541 HHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAE 610 (639)
Q Consensus 541 ~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~ 610 (639)
++||| | | |+.|....... ..+.... ..... ...+......+.+++.+|++.
T Consensus 255 ~~Di~SlGv~l~el~t~g~~p~~~~~~~-~~~~~~~----~~~~~--------------~~~~~~~~~~~~~l~~~cl~~ 315 (337)
T cd05054 255 QSDVWSFGVLLWEIFSLGASPYPGVQID-EEFCRRL----KEGTR--------------MRAPEYATPEIYSIMLDCWHN 315 (337)
T ss_pred cccHHHHHHHHHHHHHcCCCCCCCCCcc-HHHHHHH----hccCC--------------CCCCccCCHHHHHHHHHHccC
Confidence 56776 5 3 55554321100 0111111 11000 001112334678899999999
Q ss_pred CCCCCCCHHHHHHHHHHhHH
Q 041082 611 SPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 611 ~p~~RP~m~~v~~~l~~~~~ 630 (639)
+|++||++.||+++|+++.+
T Consensus 316 ~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 316 NPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999998754
No 54
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.79 E-value=6.6e-19 Score=185.33 Aligned_cols=200 Identities=20% Similarity=0.313 Sum_probs=132.0
Q ss_pred CCcCcceEEEec------CCceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gs 458 (639)
.+||.||++... .+..+|+|.+.... ......+..|+..++ .+|+||+++|+
T Consensus 49 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~ 128 (374)
T cd05106 49 GAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGD 128 (374)
T ss_pred CCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCc
Confidence 468999987642 23579999986432 222334555655532 26899999999
Q ss_pred chhccccC---------------------------------------------------------------------Ccc
Q 041082 459 LEKCLYSS---------------------------------------------------------------------NYI 469 (639)
Q Consensus 459 L~~~l~~~---------------------------------------------------------------------~~~ 469 (639)
|.++++.. ...
T Consensus 129 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (374)
T cd05106 129 LLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWP 208 (374)
T ss_pred HHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCC
Confidence 98876431 124
Q ss_pred CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-c------------c--
Q 041082 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-F------------T-- 534 (639)
Q Consensus 470 l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-~------------~-- 534 (639)
++|.+..+|+.+++.||+||| ..+|+||||||+||++++++.+||+|||+++.+...... . +
T Consensus 209 l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~ 285 (374)
T cd05106 209 LDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPES 285 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHH
Confidence 788889999999999999999 678999999999999999999999999999865432210 0 0
Q ss_pred --ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHH
Q 041082 535 --QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFN 602 (639)
Q Consensus 535 --~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~ 602 (639)
....+.++||| | | |+.|....... ..+...+.... ....+ ......+.+
T Consensus 286 ~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-~~~~~~~~~~~-----~~~~~-------------~~~~~~l~~ 346 (374)
T cd05106 286 IFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-SKFYKMVKRGY-----QMSRP-------------DFAPPEIYS 346 (374)
T ss_pred hcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-HHHHHHHHccc-----CccCC-------------CCCCHHHHH
Confidence 01122366777 5 3 66665432111 11111110000 00000 011235778
Q ss_pred HHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 603 LAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 603 l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
++.+|++.+|++||++.+|+++|+++
T Consensus 347 li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 347 IMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 88999999999999999999999876
No 55
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.79 E-value=1.1e-18 Score=173.20 Aligned_cols=199 Identities=25% Similarity=0.333 Sum_probs=135.0
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhhhhhhHHHHHHHHH----------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMK----------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~~l 463 (639)
..+|.||.+.... |...|||..........+.+..|+.+++ .+.+||+++|||.+++
T Consensus 28 Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~ 107 (313)
T KOG0198|consen 28 GSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLI 107 (313)
T ss_pred ccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHH
Confidence 3488999998754 8899999987763222344555555532 2568999999999998
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-Ccceeeccccccccccc--cC---C-C--c-
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLK--ED---Q-S--F- 533 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~--~~---~-~--~- 533 (639)
......++.....+++.+|.+||+||| +.+++|||||+.|||++. ++.+||+|||+|+.... .. . + .
T Consensus 108 ~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gt 184 (313)
T KOG0198|consen 108 KRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGT 184 (313)
T ss_pred HHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCC
Confidence 764336899999999999999999999 788999999999999999 79999999999987653 11 0 0 0
Q ss_pred -----cccc--c-c--cccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 534 -----TQNT--N-T--CHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 534 -----~~~~--~-~--~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
+... + . .++||| | ||++|-.+. ....+|+....... .-|.+ +.
T Consensus 185 p~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~~~----~~P~i----------p~ 246 (313)
T KOG0198|consen 185 PNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGRED----SLPEI----------PD 246 (313)
T ss_pred ccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhccC----CCCCC----------Cc
Confidence 0000 1 1 267888 6 777776532 11112221111111 11111 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
......-+....|.+.+|++|||+.+.+..-.
T Consensus 247 ~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 247 SLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred ccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 12233455667999999999999999987654
No 56
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=3.4e-19 Score=166.71 Aligned_cols=218 Identities=21% Similarity=0.241 Sum_probs=141.3
Q ss_pred CCcCcceEEE-ecCCceeeeEEechhhh--hhhhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKAR-IQDGMKVAVKVFDLQYE--RAFKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~-l~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
..||.||++. +.+|..+|.|.+..... ........|+.+++ .+||||+..|+|+.
T Consensus 30 GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsq 109 (375)
T KOG0591|consen 30 GSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQ 109 (375)
T ss_pred CcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHH
Confidence 3488999987 67899999998764432 23344455555532 47999999999999
Q ss_pred cccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCC--eEeecCCCCceeecCCcceeeccccccccccccCCCcccc
Q 041082 462 CLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTP--IIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQN 536 (639)
Q Consensus 462 ~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~--i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~ 536 (639)
.+.. ..+.++.....++..+.++||..+|+.. ++ |+||||||.||.++..+.+|++|||++|++..+.......
T Consensus 110 mIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~ 188 (375)
T KOG0591|consen 110 MIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSL 188 (375)
T ss_pred HHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhh
Confidence 8864 4456788889999999999999999532 44 9999999999999999999999999999987765443333
Q ss_pred ccccc----cccccCCCCCCCccCCCccchHHHHHhhCCCCcc--eeeeccccccccccccch-HHHHHHHHHHHhhccC
Q 041082 537 TNTCH----HRIYGTRRNPQMNFFSGEMTLKSWVNDLLPISVM--EVVDVNLLSMEDKYFTTK-KQCLSFVFNLAMECTA 609 (639)
Q Consensus 537 ~~~~~----~dvyGtg~~p~~~~~~~~~~l~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~-~~~~~~~~~l~~~C~~ 609 (639)
++|.. ..+-+.|-.+.+|+|+-|.-+.+...-..|.... ..+..+|... +.+..+ +-....+-+|+-.|+.
T Consensus 189 VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg--d~~~~p~~~YS~~l~~li~~ci~ 266 (375)
T KOG0591|consen 189 VGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG--DYPPLPDEHYSTDLRELINMCIA 266 (375)
T ss_pred cCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC--CCCCCcHHHhhhHHHHHHHHHcc
Confidence 33320 0000234444444444444444433322222110 1111111111 011122 2345677888999999
Q ss_pred CCCCCCCCHHHHHHHHHH
Q 041082 610 ESPKQRINAKESVTRLLK 627 (639)
Q Consensus 610 ~~p~~RP~m~~v~~~l~~ 627 (639)
.+|+.||+-...+..++.
T Consensus 267 vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 267 VDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCcccCCCcchHHHHHHH
Confidence 999999986555554443
No 57
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.78 E-value=4.6e-19 Score=179.12 Aligned_cols=201 Identities=21% Similarity=0.345 Sum_probs=133.8
Q ss_pred CCcCcceEEEec-CCc----eeeeEEechhhh-hhhhhHHHHHHHHH-------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGM----KVAVKVFDLQYE-RAFKSFDVACDMMK-------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~----~vavK~l~~~~~-~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+. .+++|.+..... .....+..++...+ .+++||+++|+|.+
T Consensus 18 G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~~gsL~~ 97 (279)
T cd05111 18 GVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSPLGSLLD 97 (279)
T ss_pred cCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCCCCcHHH
Confidence 568899999863 343 477777653321 12234444443321 26789999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--ccc----
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--FTQ---- 535 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--~~~---- 535 (639)
++......++|.....++.+++.||+||| ..+++||||||+||+++.++.+|++|||+++........ .+.
T Consensus 98 ~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05111 98 HVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTP 174 (279)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCc
Confidence 99765567899999999999999999999 667999999999999999999999999999876433211 000
Q ss_pred -----------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 536 -----------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 536 -----------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
...+.++||| | | |+.|..+.. ...+.+++.... ...+ +.
T Consensus 175 ~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--~~~~~~~~~~~~-----~~~~-------------~~ 234 (279)
T cd05111 175 IKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR--PHEVPDLLEKGE-----RLAQ-------------PQ 234 (279)
T ss_pred ccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHCCC-----cCCC-------------CC
Confidence 0112256666 4 3 555543211 111122221100 0000 11
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
.+...+.+++.+|+..+|++||+|.|+.+.++.+.+
T Consensus 235 ~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 235 ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 233456778899999999999999999999988654
No 58
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.78 E-value=3.6e-19 Score=179.07 Aligned_cols=199 Identities=26% Similarity=0.413 Sum_probs=130.9
Q ss_pred CCcCcceEEEecCC---ceeeeEEechhh--hhhhhhHHHHHHHHH--------------------------hhhhhcCC
Q 041082 407 SGFGSIYKARIQDG---MKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------------KLVLEYMP 455 (639)
Q Consensus 407 ~g~g~vy~~~l~~g---~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------------~Lv~ey~~ 455 (639)
.++|.||++..... ..+|+|.+.... ......+..|...++ .+++||++
T Consensus 10 G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~ 89 (272)
T cd05075 10 GEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMK 89 (272)
T ss_pred ccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCC
Confidence 46889999987543 258899876432 222344555544421 25789999
Q ss_pred CCCchhcccc-----CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 456 HGSLEKCLYS-----SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 456 ~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
+|+|.+++.. ....++|.....++.+++.|++||| ..+|+||||||+||+++.++.+|++|||+++......
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (272)
T cd05075 90 HGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGD 166 (272)
T ss_pred CCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccCccc
Confidence 9999887632 2245899999999999999999999 6789999999999999999999999999998764322
Q ss_pred CCc-------c----------ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeecccc
Q 041082 531 QSF-------T----------QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLL 583 (639)
Q Consensus 531 ~~~-------~----------~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 583 (639)
... + ....+.++|+| | + |+.|.... ....+.+.+. ....
T Consensus 167 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~~~~~~~~~---~~~~--------- 232 (272)
T cd05075 167 YYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV--ENSEIYDYLR---QGNR--------- 232 (272)
T ss_pred ceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHH---cCCC---------
Confidence 100 0 00112256666 4 3 44443311 0011111110 0000
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
......+...+.+++.+|++.+|++||+|.+++++|+++
T Consensus 233 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 ------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000112344578899999999999999999999999864
No 59
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.78 E-value=5.7e-19 Score=176.74 Aligned_cols=198 Identities=22% Similarity=0.353 Sum_probs=135.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++... .+..+++|.+..... ....+..|++.++ .+++||+++|+|.+++..
T Consensus 17 g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (263)
T cd05052 17 GQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE 95 (263)
T ss_pred cccceEEEEEEecCCceEEEEEecCCch-HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHh
Confidence 347889998865 478899998764322 2345555555532 268999999999998865
Q ss_pred C-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------
Q 041082 466 S-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF----------- 533 (639)
Q Consensus 466 ~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~----------- 533 (639)
. ...++|..+..++.++++||+||| ..+++||||||+||++++++.+|++|||+++.........
T Consensus 96 ~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~ 172 (263)
T cd05052 96 CNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 172 (263)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccC
Confidence 3 345899999999999999999999 6689999999999999999999999999998765432110
Q ss_pred -cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 534 -TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 534 -~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
+. ...+.++||| | | |..|... ....++....... .. .+.++.+..
T Consensus 173 aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~-----~~~~~~~~~~~~~---------~~------~~~~~~~~~ 232 (263)
T cd05052 173 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLSQVYELLEKG---------YR------MERPEGCPP 232 (263)
T ss_pred CHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHCC---------CC------CCCCCCCCH
Confidence 00 0112256666 5 4 5555432 1111111111000 00 001112334
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 599 FVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+.+++.+|++.+|++||+|.++.++|+.+
T Consensus 233 ~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 233 KVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 677889999999999999999999999865
No 60
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.78 E-value=6.6e-19 Score=175.53 Aligned_cols=196 Identities=27% Similarity=0.360 Sum_probs=133.6
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++... |..+++|...... ..+.+..|+..++ .+++||+++|+|.+++..
T Consensus 17 g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 93 (256)
T cd05082 17 GEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 93 (256)
T ss_pred cCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHh
Confidence 457889998765 6778999875432 2345555655532 368999999999998875
Q ss_pred CC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc---------
Q 041082 466 SN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ--------- 535 (639)
Q Consensus 466 ~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~--------- 535 (639)
.. ..++|..+.+++.+++.|++||| ..+++||||||+||++++++.+|++|||+++...........
T Consensus 94 ~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~ 170 (256)
T cd05082 94 RGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEA 170 (256)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHH
Confidence 33 35899999999999999999999 668999999999999999999999999998865432211000
Q ss_pred ---cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHH
Q 041082 536 ---NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFN 602 (639)
Q Consensus 536 ---~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~ 602 (639)
...+.++||| | + |+.|... ..+.+++........ .+....+...+.+
T Consensus 171 ~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~-----~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 230 (256)
T cd05082 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPR-----IPLKDVVPRVEKGYK---------------MDAPDGCPPVVYD 230 (256)
T ss_pred HccCCCCchhhhHHHHHHHHHHHhCCCCCCCC-----CCHHHHHHHHhcCCC---------------CCCCCCCCHHHHH
Confidence 0112256666 5 3 5554431 122222211100000 0011223446778
Q ss_pred HHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 603 LAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 603 l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
++.+|++.+|++||+|.+++++|+++
T Consensus 231 li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 231 VMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 89999999999999999999998754
No 61
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.78 E-value=5.2e-19 Score=179.57 Aligned_cols=208 Identities=27% Similarity=0.404 Sum_probs=136.8
Q ss_pred CCcCcceEEEe------cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARI------QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l------~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.||++.. ..+..+++|.+..........+..|++.++ .+|+||+++|+|.
T Consensus 16 G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (288)
T cd05093 16 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 95 (288)
T ss_pred cCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHH
Confidence 45788998864 234568899887655444556777766643 2689999999999
Q ss_pred hccccC------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 461 KCLYSS------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 461 ~~l~~~------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+++... ...++|.++.+++.+++.||+||| ..+++||||||+||++++++.++++|||+++....
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 172 (288)
T cd05093 96 KFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS 172 (288)
T ss_pred HHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEeccCCccccccC
Confidence 887632 124899999999999999999999 67899999999999999999999999999986543
Q ss_pred cCCC--c-----------cc----cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeecccccccc
Q 041082 529 EDQS--F-----------TQ----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMED 587 (639)
Q Consensus 529 ~~~~--~-----------~~----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~ 587 (639)
.... . +. ...+.++|+| +.|..+.+++. ...|.. ..+.++....+..
T Consensus 173 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiw-----------slG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~- 240 (288)
T cd05093 173 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW-----------SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV- 240 (288)
T ss_pred CceeecCCCCCccccccCHHHhccCCCCchhhHH-----------HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-
Confidence 2211 0 00 0112245555 33333333322 111110 0000000000000
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 588 KYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
...+..+...+.+++.+|++.+|.+||+|.||.+.|+.+...
T Consensus 241 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 --LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 000111234578899999999999999999999999988754
No 62
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.78 E-value=7.5e-19 Score=176.38 Aligned_cols=199 Identities=22% Similarity=0.427 Sum_probs=137.6
Q ss_pred CCcCcceEEEecC-C---ceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD-G---MKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g---~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++.... + ..+++|.+.... ......+..++..++ .+||||+++|+|.+
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (268)
T cd05063 16 GEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDK 95 (268)
T ss_pred CCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHH
Confidence 4578999998752 3 368999876543 222345656665532 37899999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------- 533 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------- 533 (639)
++......++|.++.+++.+++.|++||| ..+++||||||+||+++.++.++++|||+++.........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 172 (268)
T cd05063 96 YLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKI 172 (268)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCc
Confidence 98765456899999999999999999999 6689999999999999999999999999998664321110
Q ss_pred ------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch
Q 041082 534 ------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 534 ------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
+. ...+.++||| | | |+.|.... .-.++........ . ....
T Consensus 173 ~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~-----~~~~~~~~i~~~~---------~------~~~~ 232 (268)
T cd05063 173 PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDM-----SNHEVMKAINDGF---------R------LPAP 232 (268)
T ss_pred CceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcC-----CHHHHHHHHhcCC---------C------CCCC
Confidence 00 0112356777 5 4 66665321 1112221111000 0 0011
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
..+...+.+++.+|++.+|++||+|.+|++.|+++
T Consensus 233 ~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 233 MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 22345678999999999999999999999999875
No 63
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.78 E-value=8.2e-19 Score=175.92 Aligned_cols=199 Identities=23% Similarity=0.414 Sum_probs=135.9
Q ss_pred CCcCcceEEEecC----CceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD----GMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~----g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++.+.. ...+++|.+..... .....|..|+..++ .+++||+++|+|.+
T Consensus 15 g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 94 (266)
T cd05033 15 GEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDK 94 (266)
T ss_pred CccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHH
Confidence 5689999998743 35789998765432 22345555655532 26899999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-c-------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-F------- 533 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-~------- 533 (639)
++......++|.++.+++.+++.|++||| ..+|+||||||+||++++++.++++|||+++........ .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 171 (266)
T cd05033 95 FLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIP 171 (266)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCC
Confidence 98765557899999999999999999999 678999999999999999999999999999876421110 0
Q ss_pred -----cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 534 -----TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 534 -----~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
+. ...+.++||| | | |..|..+. ....+.+++..... .+.+.
T Consensus 172 ~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~--~~~~~~~~~~~~~~------------------~~~~~ 231 (266)
T cd05033 172 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM--SNQDVIKAVEDGYR------------------LPPPM 231 (266)
T ss_pred ccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC--CHHHHHHHHHcCCC------------------CCCCC
Confidence 00 0112255666 4 3 55444321 00111111110000 00112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+...+.+++.+|++.+|++||+|.||+++|+++
T Consensus 232 ~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 232 DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 2334577899999999999999999999999865
No 64
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.77 E-value=8.6e-19 Score=178.25 Aligned_cols=202 Identities=28% Similarity=0.441 Sum_probs=139.6
Q ss_pred CCcCcceEEEec------CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.+|++... ++..+++|.+........+.+..|+..++ .+||||+++|+|.
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (291)
T cd05094 16 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 95 (291)
T ss_pred cCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHH
Confidence 467889988642 34568888886655544556766766533 3789999999999
Q ss_pred hccccC---------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 461 KCLYSS---------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 461 ~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+++... ...++|.++.+++.+++.|++||| ..+|+||||||+||+++.++.++++|||+++.
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~ 172 (291)
T cd05094 96 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRD 172 (291)
T ss_pred HHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEECCCCcccc
Confidence 988542 134899999999999999999999 67899999999999999999999999999976
Q ss_pred ccccCCC--c-----------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceee
Q 041082 526 LLKEDQS--F-----------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVV 578 (639)
Q Consensus 526 ~~~~~~~--~-----------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 578 (639)
....... . +. ...+.++||| | | |+.|..... .....+... .....
T Consensus 173 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~~~~---~~~~~--- 244 (291)
T cd05094 173 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--NTEVIECIT---QGRVL--- 244 (291)
T ss_pred cCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHh---CCCCC---
Confidence 5432210 0 00 1112257777 5 5 666653211 111111111 11000
Q ss_pred eccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 579 DVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 579 d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
+....+...+.+++.+|++.+|++||+|.+|+++|+++...
T Consensus 245 ------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 245 ------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 00112334677899999999999999999999999998654
No 65
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.77 E-value=4.3e-19 Score=176.85 Aligned_cols=195 Identities=26% Similarity=0.375 Sum_probs=132.7
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.||++....+..+++|.+..... ....|..|++.++ .+|+||+++++|.+++...
T Consensus 15 G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 93 (256)
T cd05059 15 GQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRER 93 (256)
T ss_pred CCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhc
Confidence 457899999887777899998753322 2234555555532 3789999999999998764
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc---c--------
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT---Q-------- 535 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~---~-------- 535 (639)
...++|.....++.+++.|++||| ..+++||||||+||+++.++.+|++|||+++.......... .
T Consensus 94 ~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~P 170 (256)
T cd05059 94 KGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPP 170 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCH
Confidence 456899999999999999999999 66799999999999999999999999999986543221100 0
Q ss_pred -----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 536 -----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 536 -----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
...+.++|+| | | |+.|.+.. ..+ .....+... .. ...+..+...+
T Consensus 171 e~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-~~~-~~~~~~~~~--------~~----------~~~~~~~~~~~ 230 (256)
T cd05059 171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF-SNS-EVVESVSAG--------YR----------LYRPKLAPTEV 230 (256)
T ss_pred HHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC-CHH-HHHHHHHcC--------Cc----------CCCCCCCCHHH
Confidence 0111246666 4 3 44444311 000 011111000 00 01112234568
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
.+++.+|+..+|++||+|.||++.|
T Consensus 231 ~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 231 YTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHh
Confidence 8899999999999999999999876
No 66
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.77 E-value=3.3e-18 Score=171.51 Aligned_cols=202 Identities=21% Similarity=0.318 Sum_probs=136.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.+|++... +|..+++|.+.... ......+..|++.++ .+|+||+++|+|.++
T Consensus 13 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 92 (267)
T cd08224 13 GQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRM 92 (267)
T ss_pred CCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHH
Confidence 457889999876 78899999875322 222345555655533 268999999999988
Q ss_pred ccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------
Q 041082 463 LYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------ 533 (639)
Q Consensus 463 l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------ 533 (639)
+.. ....+++.++..++.++++|++||| ..+++||||||+||+++.++.++++|||+++.........
T Consensus 93 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~ 169 (267)
T cd08224 93 IKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGT 169 (267)
T ss_pred HHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCC
Confidence 753 2345899999999999999999999 6789999999999999999999999999987654322110
Q ss_pred -----cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch-H
Q 041082 534 -----TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK-K 594 (639)
Q Consensus 534 -----~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~ 594 (639)
+. ...+.++|+| | +|+.|... ....+.++........ . .+.+ .
T Consensus 170 ~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~---~~~~~~~~~~~~~~~~----~-----------~~~~~~ 231 (267)
T cd08224 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKIEKCD----Y-----------PPLPAD 231 (267)
T ss_pred ccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCccc---CCccHHHHHhhhhcCC----C-----------CCCChh
Confidence 00 0011245666 4 55555421 1222222221110000 0 0011 1
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
.....+.+++.+|+..+|++||++.+|+++++++.
T Consensus 232 ~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 232 HYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 33446778899999999999999999999998874
No 67
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.77 E-value=6.8e-19 Score=175.46 Aligned_cols=202 Identities=19% Similarity=0.287 Sum_probs=133.7
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.+|.+...++..+|+|.+..... ....|..++..++ .+++||+++|+|.+++...
T Consensus 15 G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~ 93 (256)
T cd05113 15 GQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREH 93 (256)
T ss_pred cccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhc
Confidence 457889999887777799998764322 2345666666532 3689999999999988754
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-c----------
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT-Q---------- 535 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~-~---------- 535 (639)
...++|.++.+++.+++.|++||| ..+++|+||||.||++++++.+|++|||+++.......... .
T Consensus 94 ~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~p 170 (256)
T cd05113 94 GKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP 170 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCH
Confidence 446899999999999999999999 67899999999999999999999999999886543221100 0
Q ss_pred -----cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCCc---ceeeeccccccccccccchHHHHHHHHHHHhh
Q 041082 536 -----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPISV---MEVVDVNLLSMEDKYFTTKKQCLSFVFNLAME 606 (639)
Q Consensus 536 -----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~ 606 (639)
...+.++||| +.|..+.+++. ...|... .++.+....... ...+......+.+++.+
T Consensus 171 e~~~~~~~~~~~Di~-----------slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~ 236 (256)
T cd05113 171 EVLLYSKFSSKSDVW-----------AFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR---LYRPHLASEKVYAIMYS 236 (256)
T ss_pred HHHhcCcccchhHHH-----------HHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHH
Confidence 0011245555 33333333322 1111110 000000000000 00011123567889999
Q ss_pred ccCCCCCCCCCHHHHHHHHH
Q 041082 607 CTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 607 C~~~~p~~RP~m~~v~~~l~ 626 (639)
|++.+|++||++.++++.|+
T Consensus 237 cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 237 CWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HcCCCcccCCCHHHHHHhhC
Confidence 99999999999999998764
No 68
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.77 E-value=8.5e-19 Score=174.01 Aligned_cols=197 Identities=24% Similarity=0.343 Sum_probs=135.3
Q ss_pred CCcCcceEEEecCCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++...++..+++|.+..... .....+..|++.++ .+|+||+++|+|.+++..
T Consensus 6 g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 85 (250)
T cd05085 6 GNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRK 85 (250)
T ss_pred CCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHh
Confidence 467899999988889999998764432 22234555665533 278999999999998875
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------------
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------------ 533 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------------ 533 (639)
....++|.++..++.+++.|+.|+| ..+++||||||+||+++.++.+|++|||+++.........
T Consensus 86 ~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~a 162 (250)
T cd05085 86 KKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTA 162 (250)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccC
Confidence 4456899999999999999999999 6789999999999999999999999999997543221110
Q ss_pred cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 534 TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 534 ~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
+. ...+.++|+| | | |..|.... ....-... .... . ....+..+...
T Consensus 163 PE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~-----~~~~~~~~-~~~~--------~------~~~~~~~~~~~ 222 (250)
T cd05085 163 PEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM-----TNQQAREQ-VEKG--------Y------RMSCPQKCPDD 222 (250)
T ss_pred HHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHH-HHcC--------C------CCCCCCCCCHH
Confidence 00 0112256666 4 3 55454321 11110000 0000 0 00011223456
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
+.+++.+|++.+|++||+|.|++++|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 888999999999999999999999874
No 69
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.77 E-value=8e-19 Score=175.04 Aligned_cols=198 Identities=21% Similarity=0.322 Sum_probs=135.9
Q ss_pred CCcCcceEEEec---CCceeeeEEechhhh--hhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ---DGMKVAVKVFDLQYE--RAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~---~g~~vavK~l~~~~~--~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.+. .+..+|+|.+..... .....+..|+..++ .+|+||+++|+|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (257)
T cd05116 6 GNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGPLNKF 85 (257)
T ss_pred cCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCcHHHH
Confidence 457899998653 568899998864432 23345655655532 268999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc---c-----
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---T----- 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---~----- 534 (639)
+... ..+++..+.+++.+++.|++|+| ..+|+||||||+||+++.++.+|++|||+++.+....... .
T Consensus 86 l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T cd05116 86 LQKN-KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWP 161 (257)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCC
Confidence 8643 35889999999999999999999 6789999999999999999999999999998764332110 0
Q ss_pred ------c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 535 ------Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 535 ------~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
. ...+.++|+| | | |+.|..+. ....+.+.+.. ... . +.+.
T Consensus 162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~i~~---~~~---~------------~~~~ 221 (257)
T cd05116 162 VKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM--KGNEVTQMIES---GER---M------------ECPQ 221 (257)
T ss_pred ccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHC---CCC---C------------CCCC
Confidence 0 0112256776 5 4 56565421 11112222211 000 0 0111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+...+.+++.+|++.+|++||+|.+|+++|+..
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 2334567899999999999999999999999753
No 70
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.1e-18 Score=171.73 Aligned_cols=196 Identities=23% Similarity=0.274 Sum_probs=135.2
Q ss_pred CcCcceEEEe-cCCceeeeEEechhhhhh-----hh--hHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 408 GFGSIYKARI-QDGMKVAVKVFDLQYERA-----FK--SFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 408 g~g~vy~~~l-~~g~~vavK~l~~~~~~~-----~~--~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
+||.|-.+.- ..|+.+|||.+....... .+ ....|+++++ ++|+|||++|.|
T Consensus 184 afg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeL 263 (475)
T KOG0615|consen 184 AFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGEL 263 (475)
T ss_pred ceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccH
Confidence 4677777764 468999999986543221 11 2346777755 378999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC---cceeeccccccccccccCCCcc--
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN---MVAHLSDFGMAKLLLKEDQSFT-- 534 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~---~~~~i~dfgla~~~~~~~~~~~-- 534 (639)
.+.+-.. ..+......-++.|+..|+.||| +.+|+||||||.|||+..+ .-+||+|||+|++.+....-.+
T Consensus 264 fd~vv~n-k~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlC 339 (475)
T KOG0615|consen 264 FDKVVAN-KYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLC 339 (475)
T ss_pred HHHHHhc-cccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhc
Confidence 9887643 33555556778999999999999 7889999999999999755 7899999999998864432100
Q ss_pred --------cc-------ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccc
Q 041082 535 --------QN-------TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYF 590 (639)
Q Consensus 535 --------~~-------~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 590 (639)
.. ....+.|+| | ||..|.++.+.. .++.+-+.. +.+...+
T Consensus 340 GTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~-~sl~eQI~~---------------G~y~f~p 403 (475)
T KOG0615|consen 340 GTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD-PSLKEQILK---------------GRYAFGP 403 (475)
T ss_pred CCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC-ccHHHHHhc---------------CcccccC
Confidence 00 011256888 7 899998765433 223332211 1111111
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 591 TTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 591 ~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
..+.+.-.+..+++-+.+..+|++||+..|+++
T Consensus 404 ~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 404 LQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 223344556777888999999999999999985
No 71
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.77 E-value=8.2e-19 Score=174.94 Aligned_cols=199 Identities=23% Similarity=0.337 Sum_probs=138.1
Q ss_pred CCcCcceEEEecC----CceeeeEEechhhhh-hhhhHHHHHHHHH-------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQD----GMKVAVKVFDLQYER-AFKSFDVACDMMK-------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~----g~~vavK~l~~~~~~-~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.... +..+++|.+...... ....+..|++.++ .+|+||+++|+|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~ 85 (257)
T cd05060 6 GNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGPLLKY 85 (257)
T ss_pred cCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCCcHHHH
Confidence 4578999887532 267899988654432 3345666665543 267899999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc-------
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ------- 535 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~------- 535 (639)
+.... .++|..+..++.+++.|++||| ..+++||||||+||+++.++.+|++|||+++...........
T Consensus 86 l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~ 161 (257)
T cd05060 86 LKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWP 161 (257)
T ss_pred HHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCcccc
Confidence 87533 6899999999999999999999 667999999999999999999999999999866433211000
Q ss_pred -----------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 536 -----------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 536 -----------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
...+.++|+| | | |+.|.... .+..+..++....+ .+.+.
T Consensus 162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~--~~~~~~~~~~~~~~------------------~~~~~ 221 (257)
T cd05060 162 LKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM--KGAEVIAMLESGER------------------LPRPE 221 (257)
T ss_pred ccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHcCCc------------------CCCCC
Confidence 0112256776 5 4 55555421 12222233221110 01112
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
.+...+.+++.+|+..+|++||++.++.+.|+++.
T Consensus 222 ~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 222 ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 23456788999999999999999999999998764
No 72
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.77 E-value=2.9e-18 Score=171.27 Aligned_cols=197 Identities=23% Similarity=0.365 Sum_probs=135.5
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhccccC-
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCLYSS- 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l~~~- 466 (639)
.++|.||++...++..+++|.+..... ....+..|+..++ .++|||+++|+|.++++..
T Consensus 17 g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05069 17 GCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGD 95 (260)
T ss_pred cCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCC
Confidence 567899999887777899998754322 2344555665533 3789999999999998753
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------------c
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------------T 534 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------------~ 534 (639)
...++|..+..++.+++.|++||| ..+++|||||+.||++++++.++++|||+++......... +
T Consensus 96 ~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~P 172 (260)
T cd05069 96 GKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAP 172 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCH
Confidence 345899999999999999999999 6679999999999999999999999999998654322110 0
Q ss_pred c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++|+| | | |+.|..+.. .....++...... + ..+......+
T Consensus 173 e~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~~--------~----------~~~~~~~~~~ 232 (260)
T cd05069 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVLEQVERGYR--------M----------PCPQGCPESL 232 (260)
T ss_pred HHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC--------C----------CCCcccCHHH
Confidence 0 0112256666 5 4 555543211 1111111111000 0 0111233457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
.+++.+|++.+|++||+|.+|++.|++
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 788889999999999999999999875
No 73
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.77 E-value=1.7e-18 Score=173.99 Aligned_cols=199 Identities=22% Similarity=0.431 Sum_probs=135.1
Q ss_pred CCcCcceEEEecC-C---ceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD-G---MKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g---~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.+|++.... + ..+++|.+.... ......|..|+..++ .+|+||+++|+|.+
T Consensus 15 g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (269)
T cd05065 15 GEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDS 94 (269)
T ss_pred CCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHH
Confidence 5688999998753 2 369999886542 223456666666533 36899999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc--c----
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT--Q---- 535 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~--~---- 535 (639)
++......+++.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||+++.......... .
T Consensus 95 ~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 171 (269)
T cd05065 95 FLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGG 171 (269)
T ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCC
Confidence 88765556899999999999999999999 67899999999999999999999999999986643221100 0
Q ss_pred --------------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeecccccccccccc
Q 041082 536 --------------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFT 591 (639)
Q Consensus 536 --------------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 591 (639)
...+.++||| | + |..|.... ......+++.... ...
T Consensus 172 ~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~--~~~~~~~~i~~~~------------------~~~ 231 (269)
T cd05065 172 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--SNQDVINAIEQDY------------------RLP 231 (269)
T ss_pred CcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC--CHHHHHHHHHcCC------------------cCC
Confidence 0011234555 3 1 44443211 0111111211000 001
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 592 TKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 592 ~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+.++...+.+++.+|++.+|++||+|.+|+.+|+++
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1223445677899999999999999999999998764
No 74
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.77 E-value=1.2e-18 Score=176.01 Aligned_cols=201 Identities=19% Similarity=0.325 Sum_probs=137.4
Q ss_pred CCcCcceEEEecC-----CceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQD-----GMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~-----g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL 459 (639)
.++|.||++.... +..+++|.+.... ......+..|...++ .++++|+++|+|
T Consensus 17 g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L 96 (280)
T cd05043 17 GTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNL 96 (280)
T ss_pred cCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcH
Confidence 4688999998765 6888999875332 122344555555432 257789999999
Q ss_pred hhccccCC-------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC
Q 041082 460 EKCLYSSN-------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS 532 (639)
Q Consensus 460 ~~~l~~~~-------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~ 532 (639)
.+++.... ..++|.++..++.+++.||+||| ..+++||||||+||++++++.+|++|||+++.+......
T Consensus 97 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~ 173 (280)
T cd05043 97 KLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH 173 (280)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE
Confidence 98876421 45899999999999999999999 678999999999999999999999999999865432211
Q ss_pred c-------c----------ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeecccccc
Q 041082 533 F-------T----------QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSM 585 (639)
Q Consensus 533 ~-------~----------~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 585 (639)
. + ....+.++||| | | |+.|..+. ....+..++......
T Consensus 174 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~~------------- 238 (280)
T cd05043 174 CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI--DPFEMAAYLKDGYRL------------- 238 (280)
T ss_pred EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC--CHHHHHHHHHcCCCC-------------
Confidence 0 0 01112356666 5 4 66555421 112222222211100
Q ss_pred ccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 586 EDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 586 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
.....+...+.+++.+|+..+|++||++.+|++.|+.+..
T Consensus 239 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 239 -----AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -----CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0011223457889999999999999999999999998754
No 75
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.77 E-value=1.9e-18 Score=175.94 Aligned_cols=217 Identities=25% Similarity=0.316 Sum_probs=136.6
Q ss_pred CCcCcceEEEecC------CceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQD------GMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~~------g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gs 458 (639)
.++|.||++.... ...+++|.+.... .+....+..|++.++ .+++||+++|+
T Consensus 23 g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~ 102 (293)
T cd05053 23 GAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGN 102 (293)
T ss_pred cccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCc
Confidence 4578999987642 3578999876432 222344555655532 25789999999
Q ss_pred chhcccc---------------CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccc
Q 041082 459 LEKCLYS---------------SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523 (639)
Q Consensus 459 L~~~l~~---------------~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla 523 (639)
|.+++.. ....++|..+.+++.++|.|++||| ..+|+||||||+||+++.++.+|++|||++
T Consensus 103 L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~ 179 (293)
T cd05053 103 LRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLA 179 (293)
T ss_pred HHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcCCCeEEeCccccc
Confidence 9988753 2345899999999999999999999 678999999999999999999999999999
Q ss_pred ccccccCCCcc--ccc---cccccccc-cCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeeccccccccccccch
Q 041082 524 KLLLKEDQSFT--QNT---NTCHHRIY-GTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 524 ~~~~~~~~~~~--~~~---~~~~~dvy-Gtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~~~~~~~ 593 (639)
+.+........ ... ......++ +.......|+|+.|..+.+.+. ...+.. ..++.+....+. ..+.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~ 256 (293)
T cd05053 180 RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY---RMEKP 256 (293)
T ss_pred cccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---cCCCC
Confidence 87653221100 000 00011111 1122223344454544444222 111111 001111000000 00112
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
..+...+.+++.+|+..+|++||||.|+++.|+.+.
T Consensus 257 ~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 257 QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 233456888999999999999999999999998764
No 76
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=2.2e-18 Score=177.98 Aligned_cols=192 Identities=27% Similarity=0.342 Sum_probs=139.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.||..+|.+.- ..|..+|+|++.... .........|+++.+ ++|.|.+++|+|..+
T Consensus 29 GgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el 108 (592)
T KOG0575|consen 29 GGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMEL 108 (592)
T ss_pred CcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHH
Confidence 57888999986 789999999997643 233456667777743 367899999999988
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC-Ccc-------
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ-SFT------- 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~-~~~------- 534 (639)
+. ..+.++......+..||+.||.||| +.+|+|||||..|++|++++++||+|||||..+..+.. ..+
T Consensus 109 ~K-rrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNY 184 (592)
T KOG0575|consen 109 LK-RRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNY 184 (592)
T ss_pred HH-hcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcc
Confidence 87 5567889888899999999999999 77899999999999999999999999999998874421 111
Q ss_pred -------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 535 -------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 535 -------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
...-+++.||| | +|++|.+.. .+.+-..... . -|.. .+.....
T Consensus 185 IAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vkety~~Ik-~-----~~Y~----------~P~~ls~ 243 (592)
T KOG0575|consen 185 IAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVKETYNKIK-L-----NEYS----------MPSHLSA 243 (592)
T ss_pred cChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHHHHHHHHH-h-----cCcc----------cccccCH
Confidence 11123478999 7 899988632 1222111100 0 0000 0111123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...+|+..-++.+|.+|||..+|+.
T Consensus 244 ~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 244 EAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhc
Confidence 4556777889999999999999985
No 77
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.77 E-value=9.7e-19 Score=174.29 Aligned_cols=203 Identities=27% Similarity=0.383 Sum_probs=134.5
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.||++... |..+++|.+..... ..+.+..|+..++ .+|+||+++++|.+++...
T Consensus 17 g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~ 94 (256)
T cd05039 17 GEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSR 94 (256)
T ss_pred CCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhc
Confidence 457899998875 78899999876543 3455666665533 2688999999999988653
Q ss_pred C-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc----------
Q 041082 467 N-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ---------- 535 (639)
Q Consensus 467 ~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~---------- 535 (639)
. ..++|.....++.+++.|++||| ..+++||||||+||+++.++.++++|||+++...........
T Consensus 95 ~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~ 171 (256)
T cd05039 95 GRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEAL 171 (256)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhh
Confidence 3 36899999999999999999999 678999999999999999999999999999866432211000
Q ss_pred --cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCCc---ceeeeccccccccccccchHHHHHHHHHHHhhccC
Q 041082 536 --NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPISV---MEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTA 609 (639)
Q Consensus 536 --~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~ 609 (639)
...+.++||| +-|..+.+++. ...|... .++.+ .+.... ..+.+..+...+.+++.+|+.
T Consensus 172 ~~~~~~~~~Di~-----------slG~il~~l~~~g~~p~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (256)
T cd05039 172 REKKFSTKSDVW-----------SFGILLWEIYSFGRVPYPRIPLKDVVP-HVEKGY--RMEAPEGCPPEVYKVMKDCWE 237 (256)
T ss_pred cCCcCCcHHHHH-----------HHHHHHHHHHhcCCCCCCCCCHHHHHH-HHhcCC--CCCCccCCCHHHHHHHHHHhc
Confidence 0011145555 22333333221 1111100 00000 000000 001112234567889999999
Q ss_pred CCCCCCCCHHHHHHHHHHh
Q 041082 610 ESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 610 ~~p~~RP~m~~v~~~l~~~ 628 (639)
.+|++||++.|++++|+.+
T Consensus 238 ~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 238 LDPAKRPTFKQLREQLALI 256 (256)
T ss_pred cChhhCcCHHHHHHHHhcC
Confidence 9999999999999999753
No 78
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.76 E-value=1.1e-18 Score=174.60 Aligned_cols=200 Identities=23% Similarity=0.389 Sum_probs=131.9
Q ss_pred CCcCcceEEEecC----CceeeeEEechh-hhhhhhhHHHHHHHHH---------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQD----GMKVAVKVFDLQ-YERAFKSFDVACDMMK---------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~~----g~~vavK~l~~~-~~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~ 460 (639)
.++|.||++...+ ...+|+|.+... .......+..+...++ .+++||+++|+|.
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~ 85 (262)
T cd05058 6 GHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLR 85 (262)
T ss_pred cCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHH
Confidence 4578999987632 357899987432 1222344555554422 3678999999999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--------
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------- 532 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------- 532 (639)
+++.......++..+..++.+++.|++||| ..+++||||||+||+++.++.+|++|||+++........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 162 (262)
T cd05058 86 NFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGA 162 (262)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccC
Confidence 998764445788888999999999999999 678999999999999999999999999999755332110
Q ss_pred -cc----------ccccccccccc--c-------CC-CCCCCccCCCccchHHHHHhhCCCCcceeeecccccccccccc
Q 041082 533 -FT----------QNTNTCHHRIY--G-------TR-RNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFT 591 (639)
Q Consensus 533 -~~----------~~~~~~~~dvy--G-------tg-~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 591 (639)
.+ ....+.++||| | || ..|.... ....+..++.. .. ...
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--~~~~~~~~~~~---~~---------------~~~ 222 (262)
T cd05058 163 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--DSFDITVYLLQ---GR---------------RLL 222 (262)
T ss_pred cCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHhc---CC---------------CCC
Confidence 00 01112256666 5 43 2333211 11111111110 00 000
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 592 TKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 592 ~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
.+......+.+++..|++.+|++||++.||+++|+++.
T Consensus 223 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 223 QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 01112345778999999999999999999999998764
No 79
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.76 E-value=1.2e-18 Score=173.20 Aligned_cols=200 Identities=23% Similarity=0.316 Sum_probs=132.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... ++..+++|...... ......+..|++.++ .+|+||+++++|.+++.
T Consensus 6 g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 85 (252)
T cd05084 6 GNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR 85 (252)
T ss_pred ccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHH
Confidence 457899999874 67889999865322 222345666665533 26899999999999987
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc----------
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT---------- 534 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~---------- 534 (639)
.....++|.++..++.+++.||+||| ..+++||||||.||+++.++.+|++|||+++..........
T Consensus 86 ~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y 162 (252)
T cd05084 86 TEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKW 162 (252)
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceee
Confidence 65556899999999999999999999 67899999999999999999999999999875442211100
Q ss_pred ---c----cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC------cceeeeccccccccccccchHHHHHHH
Q 041082 535 ---Q----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS------VMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ---~----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~------~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++||| +-|..+.+++. ...|.. ..+.++..... ..+..+...+
T Consensus 163 ~aPE~~~~~~~~~~~Dv~-----------slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 225 (252)
T cd05084 163 TAPEALNYGRYSSESDVW-----------SFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRL------PCPELCPDAV 225 (252)
T ss_pred cCchhhcCCCCChHHHHH-----------HHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCC------CCcccCCHHH
Confidence 0 0011245555 22222222221 111110 00001000000 1112234567
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
.+++.+|++.+|++||+|.+|.++|+
T Consensus 226 ~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 226 YRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 88999999999999999999999885
No 80
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.76 E-value=3.6e-18 Score=170.86 Aligned_cols=198 Identities=22% Similarity=0.384 Sum_probs=136.9
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhccccC-
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCLYSS- 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l~~~- 466 (639)
.++|.||++...+...+++|.+..... ....+..|++..+ .+|+||+++|+|.+++...
T Consensus 17 g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 95 (262)
T cd05071 17 GCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEM 95 (262)
T ss_pred CCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhcc
Confidence 567899999887777899998864322 2235555655532 3789999999999998752
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc------------
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT------------ 534 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~------------ 534 (639)
...++|.++..++.+++.||+|+| ..+++||||||.||++++++.++++|||.++.+........
T Consensus 96 ~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~P 172 (262)
T cd05071 96 GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 172 (262)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCH
Confidence 345799999999999999999999 67899999999999999999999999999986543221100
Q ss_pred c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++|+| | | |+.|..+.... +..... .... . .....++...+
T Consensus 173 E~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-----~~~~~~-~~~~----~----------~~~~~~~~~~l 232 (262)
T cd05071 173 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQV-ERGY----R----------MPCPPECPESL 232 (262)
T ss_pred hHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-----HHHHHH-hcCC----C----------CCCccccCHHH
Confidence 0 0112357777 5 5 55554321100 000000 0000 0 00112344567
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+++.+|++.+|++||++.++.+.|+..
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 233 HDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 8999999999999999999999999753
No 81
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.76 E-value=2.1e-18 Score=173.05 Aligned_cols=205 Identities=22% Similarity=0.385 Sum_probs=133.1
Q ss_pred CCcCcceEEEec----CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ----DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~----~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+++|.+.... ......+..|+..++ .+|+||+++|+|.+
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 94 (267)
T cd05066 15 GEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDA 94 (267)
T ss_pred cCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHH
Confidence 457889998763 23478999876433 222345555655532 26899999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc---cc---
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---TQ--- 535 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---~~--- 535 (639)
++......+++.+..+|+.+++.|++||| ..+++||||||+||+++.++.++++|||+++.+....... ..
T Consensus 95 ~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 171 (267)
T cd05066 95 FLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 171 (267)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCcc
Confidence 98765556899999999999999999999 6789999999999999999999999999998764332110 00
Q ss_pred ------------cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeeccccccccccccchHHHHHH
Q 041082 536 ------------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 536 ------------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
...+.+.|+| +.|..+.+++. ...|.. ..+.++.-... ...+....+...
T Consensus 172 ~~~y~~pe~~~~~~~~~~~Dv~-----------slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 237 (267)
T cd05066 172 PIRWTAPEAIAYRKFTSASDVW-----------SYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG---YRLPAPMDCPAA 237 (267)
T ss_pred ceeecCHhHhccCccCchhhhH-----------HHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC---CcCCCCCCCCHH
Confidence 0011244555 33333332221 111110 00000000000 000111123345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 600 VFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
+.+++.+|++.+|++||+|.+|++.|.++
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 67899999999999999999999999865
No 82
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.76 E-value=4.9e-18 Score=170.34 Aligned_cols=203 Identities=20% Similarity=0.296 Sum_probs=137.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... ++..+++|.+.... ......+..|+..++ .+++||+++|+|.++
T Consensus 13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 92 (267)
T cd08228 13 GQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQM 92 (267)
T ss_pred CCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHH
Confidence 457889999864 67899999775322 222334555665533 267899999999887
Q ss_pred ccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------
Q 041082 463 LYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------- 532 (639)
Q Consensus 463 l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------- 532 (639)
+.. ....++.....+++.++++||+||| ..+++||||||+||+++.++.++++|||+++........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 169 (267)
T cd08228 93 IKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGT 169 (267)
T ss_pred HHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCC
Confidence 753 2345788889999999999999999 678999999999999999999999999998865432210
Q ss_pred ----ccc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 533 ----FTQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 533 ----~~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
.+. ...+.++|+| | ||+.|... +.....++........ .+.+ ....
T Consensus 170 ~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~---~~~~~~~~~~~~~~~~-----~~~~---------~~~~ 232 (267)
T cd08228 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLFSLCQKIEQCD-----YPPL---------PTEH 232 (267)
T ss_pred ccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcc---ccccHHHHHHHHhcCC-----CCCC---------Chhh
Confidence 000 1112356777 5 66666532 2222222222111100 0100 0122
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
....+.+++.+|++.+|++||++.+|++.++.++
T Consensus 233 ~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 233 YSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred cCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 3356788889999999999999999999998764
No 83
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.76 E-value=2.7e-18 Score=172.73 Aligned_cols=205 Identities=26% Similarity=0.401 Sum_probs=133.6
Q ss_pred CCcCcceEEEecC----CceeeeEEechhhh--hhhhhHHHHHHHHH--------------------------hhhhhcC
Q 041082 407 SGFGSIYKARIQD----GMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------------KLVLEYM 454 (639)
Q Consensus 407 ~g~g~vy~~~l~~----g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------------~Lv~ey~ 454 (639)
.++|.||++.... +..+|+|.+..... .....+..|+..++ .+++||+
T Consensus 10 G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~ 89 (273)
T cd05035 10 GEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFM 89 (273)
T ss_pred CCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEecc
Confidence 4688999988642 36799998864321 22334555555422 3567999
Q ss_pred CCCCchhcccc-----CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 455 PHGSLEKCLYS-----SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 455 ~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
++|+|..++.. ....+++.....++.+++.||+||| ..+++||||||+||++++++.+|++|||+++.....
T Consensus 90 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 166 (273)
T cd05035 90 KHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSG 166 (273)
T ss_pred CCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCccceeecccc
Confidence 99999887743 2235899999999999999999999 668999999999999999999999999999866433
Q ss_pred CCCccc-----------------cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeeccccccccc
Q 041082 530 DQSFTQ-----------------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMEDK 588 (639)
Q Consensus 530 ~~~~~~-----------------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~~ 588 (639)
...... ...+.++||| +.|..+.+++. ...|.. ..+.++....+.
T Consensus 167 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~-----------SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--- 232 (273)
T cd05035 167 DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVW-----------AFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN--- 232 (273)
T ss_pred ccccccccccCCccccCHhhcccCCCCcccchH-----------HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---
Confidence 211000 0111245555 33333333332 111110 001111000000
Q ss_pred cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 589 ~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
....+..+...+.+++.+|++.+|++||++.||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0011233456788999999999999999999999999865
No 84
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.76 E-value=1.8e-18 Score=177.08 Aligned_cols=207 Identities=25% Similarity=0.341 Sum_probs=133.3
Q ss_pred CCcCcceEEEec--------CCceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCC
Q 041082 407 SGFGSIYKARIQ--------DGMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPH 456 (639)
Q Consensus 407 ~g~g~vy~~~l~--------~g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~ 456 (639)
.++|.||++... .+..+++|...... ......+..|+..++ .++|||+++
T Consensus 26 G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (304)
T cd05101 26 GCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 105 (304)
T ss_pred cCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCC
Confidence 468899988642 23578999876432 222345555555432 278999999
Q ss_pred CCchhccccC---------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccc
Q 041082 457 GSLEKCLYSS---------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFG 521 (639)
Q Consensus 457 gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfg 521 (639)
|+|.+++... ...++|.++.+++.+++.||+||| ..+++||||||+||++++++.+|++|||
T Consensus 106 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili~~~~~~kl~D~g 182 (304)
T cd05101 106 GNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFG 182 (304)
T ss_pred CcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEEcCCCcEEECCCc
Confidence 9999888641 134788999999999999999999 6689999999999999999999999999
Q ss_pred ccccccccCCCc--c-----------c----cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeec
Q 041082 522 MAKLLLKEDQSF--T-----------Q----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDV 580 (639)
Q Consensus 522 la~~~~~~~~~~--~-----------~----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~ 580 (639)
+++......... . . ...+.++||| +-|..+.+++. ...+.. ..++++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~-----------slG~~l~el~~~g~~p~~~~~~~~~~~~ 251 (304)
T cd05101 183 LARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVW-----------SFGVLMWEIFTLGGSPYPGIPVEELFKL 251 (304)
T ss_pred cceecccccccccccCCCCCceeeCchhhccCCCCchhhHH-----------HHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 998664322110 0 0 0012245555 33333333222 111100 0010000
Q ss_pred cccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 581 NLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 581 ~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
+... .....+..+...+.+++.+|++.+|++||+|.||++.|+++..
T Consensus 252 -~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 252 -LKEG--HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred -HHcC--CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 0000 0001112344567788999999999999999999999998854
No 85
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.76 E-value=1e-18 Score=172.13 Aligned_cols=144 Identities=28% Similarity=0.437 Sum_probs=114.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
..|+.||+|... .+..||||.+.... .........|+.+++ .|||||+.+|+|.+++
T Consensus 21 GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi 100 (429)
T KOG0595|consen 21 GSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYI 100 (429)
T ss_pred cceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHH
Confidence 347889999975 57999999998763 334445566776654 3799999999999999
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC------cceeeccccccccccccCCCccc--
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN------MVAHLSDFGMAKLLLKEDQSFTQ-- 535 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~------~~~~i~dfgla~~~~~~~~~~~~-- 535 (639)
+... .++.........|+|.||++|| ...||||||||.|||+... ...||+|||+||.+.+.....+.
T Consensus 101 ~~~~-~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcG 176 (429)
T KOG0595|consen 101 RRRG-RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCG 176 (429)
T ss_pred HHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhC
Confidence 8643 5888888999999999999999 7889999999999999764 56899999999999865543111
Q ss_pred ------------cccccccccc--c-------CCCCCCCc
Q 041082 536 ------------NTNTCHHRIY--G-------TRRNPQMN 554 (639)
Q Consensus 536 ------------~~~~~~~dvy--G-------tg~~p~~~ 554 (639)
....+|+|.| | ||+.|++.
T Consensus 177 SplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 177 SPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred CccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 1123489999 7 89999874
No 86
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.76 E-value=4.9e-18 Score=172.05 Aligned_cols=208 Identities=22% Similarity=0.371 Sum_probs=134.5
Q ss_pred CCcCcceEEEe-----cCCceeeeEEechhh-hhhhhhHHHHHHHHH----------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-----QDGMKVAVKVFDLQY-ERAFKSFDVACDMMK----------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-----~~g~~vavK~l~~~~-~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gs 458 (639)
.++|.||.+.. ..+..+++|.+.... ......+..|+..++ .+|+||+++++
T Consensus 15 g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~ 94 (284)
T cd05079 15 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 94 (284)
T ss_pred CCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCC
Confidence 46889998864 346789999886432 222344555555422 26899999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc---c
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT---Q 535 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~---~ 535 (639)
|.+++......++|..+..++.+++.||+||| ..+++||||||+||+++.++.++++|||+++.+........ .
T Consensus 95 L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 171 (284)
T cd05079 95 LKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDD 171 (284)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCC
Confidence 99998654456899999999999999999999 67899999999999999999999999999986543221000 0
Q ss_pred ---------------cccccccccccCCCCCCCccCCCccchHHHHHhhCCCC-----cceeeec---------cccc-c
Q 041082 536 ---------------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVNDLLPIS-----VMEVVDV---------NLLS-M 585 (639)
Q Consensus 536 ---------------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~~~~-----~~~~~d~---------~l~~-~ 585 (639)
...+.++|+| +-|..+.+......+.. ..+.+.+ .+.. .
T Consensus 172 ~~~~~~y~apE~~~~~~~~~~~Di~-----------slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05079 172 LDSPVFWYAPECLIQSKFYIASDVW-----------SFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE 240 (284)
T ss_pred CCCCccccCHHHhccCCCCccccch-----------hhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH
Confidence 0111245555 33333332221100000 0000000 0000 0
Q ss_pred ccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 586 EDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 586 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.....+.+..+...+.+++.+|++.+|++||++.+|++.++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 241 EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000011123456788999999999999999999999999875
No 87
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=3.5e-18 Score=169.68 Aligned_cols=200 Identities=22% Similarity=0.321 Sum_probs=135.0
Q ss_pred CcceEEE-ecCCceeeeEEechhhhh-hhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccccC-
Q 041082 410 GSIYKAR-IQDGMKVAVKVFDLQYER-AFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYSS- 466 (639)
Q Consensus 410 g~vy~~~-l~~g~~vavK~l~~~~~~-~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~~- 466 (639)
+.||++. .+.+..||||++++.... .......|+..+.. +||.||..||+.+.+...
T Consensus 40 a~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~ 119 (516)
T KOG0582|consen 40 AVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYY 119 (516)
T ss_pred eEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHc
Confidence 4688887 567899999999987533 24666677776543 689999999999988752
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc----ccccc----
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF----TQNTN---- 538 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~----~~~~~---- 538 (639)
...++......|..++.+||.||| ..+-||||+|+.|||+|++|.+|++|||.+..+.+..... ...++
T Consensus 120 ~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~w 196 (516)
T KOG0582|consen 120 PDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCW 196 (516)
T ss_pred cccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccc
Confidence 234788888999999999999999 7789999999999999999999999999876554322110 01111
Q ss_pred -------------ccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 539 -------------TCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 539 -------------~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
.+|+|+| | +|..|+.....-.+-+ .-.....|.......|.+ ....-
T Consensus 197 mAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl-~tLqn~pp~~~t~~~~~d----------~~k~~ 265 (516)
T KOG0582|consen 197 MAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL-LTLQNDPPTLLTSGLDKD----------EDKKF 265 (516)
T ss_pred cChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH-HHhcCCCCCcccccCChH----------Hhhhh
Confidence 2278888 6 7777776533222211 111111111111111111 11111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
-..+-+..-.|++.||++|||+.+.++
T Consensus 266 ~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 266 SKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 225666777999999999999998764
No 88
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.76 E-value=2.1e-18 Score=174.66 Aligned_cols=198 Identities=28% Similarity=0.483 Sum_probs=133.8
Q ss_pred CCcCcceEEEecCC------ceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQDG------MKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~g------~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++..... ..+++|.+..... .....|..|+..++ .+++||+++|+|
T Consensus 16 G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L 95 (283)
T cd05048 16 GAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDL 95 (283)
T ss_pred ccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcH
Confidence 46889999886432 5789998764332 22345566665533 267899999999
Q ss_pred hhccccCC---------------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccc
Q 041082 460 EKCLYSSN---------------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524 (639)
Q Consensus 460 ~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~ 524 (639)
.+++.... ..+++.....++.+++.|++||| ..+++||||||+||++++++.++++|||+++
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~ 172 (283)
T cd05048 96 HEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSR 172 (283)
T ss_pred HHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCCcEEECCCccee
Confidence 98875421 35788899999999999999999 6689999999999999999999999999998
Q ss_pred cccccCCC--c-----------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCccee
Q 041082 525 LLLKEDQS--F-----------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEV 577 (639)
Q Consensus 525 ~~~~~~~~--~-----------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 577 (639)
........ . +. ...+.++||| | | |+.|..... ...+.+++.. .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~--~~~~~~~i~~---~----- 242 (283)
T cd05048 173 DIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS--NQEVIEMIRS---R----- 242 (283)
T ss_pred eccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHc---C-----
Confidence 65332210 0 00 0112256666 5 3 555543211 0111111110 0
Q ss_pred eeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 578 VDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 578 ~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
.. ...+..+...+.+|+.+|++.+|++||++.||+++|+.
T Consensus 243 ----~~------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 243 ----QL------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ----Cc------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 00 01123445678889999999999999999999999975
No 89
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.76 E-value=4.4e-18 Score=172.99 Aligned_cols=200 Identities=23% Similarity=0.368 Sum_probs=134.1
Q ss_pred CCcCcceEEEec------CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++... ....+++|.+..... .....+..|+..++ .+++||+++|+|
T Consensus 11 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 90 (290)
T cd05045 11 GEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 90 (290)
T ss_pred cCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCH
Confidence 568899998753 225688887653321 22345555655533 267899999999
Q ss_pred hhccccC-----------------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCccee
Q 041082 460 EKCLYSS-----------------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAH 516 (639)
Q Consensus 460 ~~~l~~~-----------------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~ 516 (639)
.+++... ...++|.+...++.+++.|++||| ..+++||||||+||++++++.+|
T Consensus 91 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~k 167 (290)
T cd05045 91 RSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMK 167 (290)
T ss_pred HHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEE
Confidence 9876531 124789999999999999999999 67899999999999999999999
Q ss_pred eccccccccccccCCC-------------ccc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhh
Q 041082 517 LSDFGMAKLLLKEDQS-------------FTQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDL 569 (639)
Q Consensus 517 i~dfgla~~~~~~~~~-------------~~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~ 569 (639)
++|||+++........ .+. ...+.++||| | | |+.|.... ....+++++...
T Consensus 168 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~~ 245 (290)
T cd05045 168 ISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI--APERLFNLLKTG 245 (290)
T ss_pred eccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHhCC
Confidence 9999999765322110 000 1122367888 6 5 66665421 111122222111
Q ss_pred CCCCcceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 570 LPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 570 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
.. + ..+..+...+.+++..|++.+|++||+|.||+++|+++-
T Consensus 246 ~~--------~----------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 246 YR--------M----------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred CC--------C----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 00 0 001122345778899999999999999999999998764
No 90
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.76 E-value=4.2e-18 Score=177.38 Aligned_cols=202 Identities=21% Similarity=0.323 Sum_probs=129.9
Q ss_pred CCcCcceEEEe------cCCceeeeEEechhhh-hhhhhHHHHHHHHH----------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI------QDGMKVAVKVFDLQYE-RAFKSFDVACDMMK----------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l------~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~----------------------~Lv~ey~~~g 457 (639)
.++|.||++.. ..+..+|||.+..... .....+..|+..+. .+++||+++|
T Consensus 18 G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g 97 (343)
T cd05103 18 GAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 97 (343)
T ss_pred CccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCC
Confidence 56899999863 3467899999864321 12233334443321 2578999999
Q ss_pred CchhccccC------------------------------------------------------------------CccCC
Q 041082 458 SLEKCLYSS------------------------------------------------------------------NYILD 471 (639)
Q Consensus 458 sL~~~l~~~------------------------------------------------------------------~~~l~ 471 (639)
+|.++++.. ...++
T Consensus 98 ~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (343)
T cd05103 98 NLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLT 177 (343)
T ss_pred cHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCC
Confidence 998877531 02368
Q ss_pred HHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-------------cc---
Q 041082 472 IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------------TQ--- 535 (639)
Q Consensus 472 ~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------------~~--- 535 (639)
|.++.+++.++++|++||| +.+|+||||||+||+++.++.+|++|||+++......... +.
T Consensus 178 ~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 254 (343)
T cd05103 178 LEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 254 (343)
T ss_pred HHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhc
Confidence 8899999999999999999 6789999999999999999999999999998653221100 00
Q ss_pred -cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHHH
Q 041082 536 -NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLA 604 (639)
Q Consensus 536 -~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~ 604 (639)
...+.++|+| | + |..|....... ..+ .. ...... . ...+......+.+++
T Consensus 255 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~---~~-~~~~~~--------~------~~~~~~~~~~~~~~~ 315 (343)
T cd05103 255 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEF---CR-RLKEGT--------R------MRAPDYTTPEMYQTM 315 (343)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHH---HH-HHhccC--------C------CCCCCCCCHHHHHHH
Confidence 0112245665 4 2 44443321000 000 00 000000 0 000011123578899
Q ss_pred hhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 605 MECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 605 ~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
..|++.+|++||+|.||++.|+.+.+
T Consensus 316 ~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 316 LDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999988754
No 91
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=2.7e-18 Score=186.56 Aligned_cols=195 Identities=23% Similarity=0.299 Sum_probs=133.2
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHH----------------------------HhhhhhcCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMM----------------------------KKLVLEYMP 455 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~----------------------------~~Lv~ey~~ 455 (639)
.++|.||++.. .+|..+|+|.++.... .....+..|+..+ ..+|+||++
T Consensus 43 G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~ 122 (496)
T PTZ00283 43 GATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYAN 122 (496)
T ss_pred CCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCC
Confidence 46899999875 5689999999865432 1222334444331 137899999
Q ss_pred CCCchhcccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC
Q 041082 456 HGSLEKCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS 532 (639)
Q Consensus 456 ~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~ 532 (639)
+|+|.+++.. ....+++.....++.+++.||+|+| ..+|+||||||+||+++.++.+||+|||+++.+......
T Consensus 123 ~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~ 199 (496)
T PTZ00283 123 AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD 199 (496)
T ss_pred CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc
Confidence 9999998864 2345888889999999999999999 778999999999999999999999999999865432110
Q ss_pred -------cc----------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccc
Q 041082 533 -------FT----------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSME 586 (639)
Q Consensus 533 -------~~----------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 586 (639)
.+ ....+.++||| | ||+.|... ....+++........ ..+
T Consensus 200 ~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~-----~~~~~~~~~~~~~~~-~~~-------- 265 (496)
T PTZ00283 200 DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG-----ENMEEVMHKTLAGRY-DPL-------- 265 (496)
T ss_pred cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHhcCCC-CCC--------
Confidence 00 00122367777 5 77777642 222333322221110 000
Q ss_pred cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 587 DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 587 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+......+.+++..|++.+|++||++.+++..
T Consensus 266 ------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 ------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred ------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11223356778899999999999999999763
No 92
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.75 E-value=5.1e-18 Score=170.18 Aligned_cols=202 Identities=21% Similarity=0.321 Sum_probs=135.1
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. .++..+++|.+.... ......+..|+..++ .+++||+++++|.++
T Consensus 13 g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 92 (267)
T cd08229 13 GQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 92 (267)
T ss_pred cCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHH
Confidence 45788999885 578899999775422 222345555555532 267899999999988
Q ss_pred ccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------
Q 041082 463 LYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------ 533 (639)
Q Consensus 463 l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------ 533 (639)
+.. ....++|.+...++.+++.|++||| ..+++|+||||+||+++.++.++++|||+++.........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 169 (267)
T cd08229 93 IKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGT 169 (267)
T ss_pred HHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCC
Confidence 753 2345899999999999999999999 6789999999999999999999999999987654322110
Q ss_pred -----cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 534 -----TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 534 -----~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
+. ...+.++|+| | +|..|... ......++.... .+...+.+. ...
T Consensus 170 ~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~---~~~~~~~~~~~~-----~~~~~~~~~---------~~~ 232 (267)
T cd08229 170 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG---DKMNLYSLCKKI-----EQCDYPPLP---------SDH 232 (267)
T ss_pred cCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccc---ccchHHHHhhhh-----hcCCCCCCC---------ccc
Confidence 00 1112256666 5 56655431 111111111110 001011110 112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
....+.+++.+|++.+|++||||.+|+++++++
T Consensus 233 ~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 233 YSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred ccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 334577888899999999999999999999875
No 93
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.75 E-value=2.9e-18 Score=172.33 Aligned_cols=200 Identities=28% Similarity=0.428 Sum_probs=130.7
Q ss_pred CCcCcceEEEecC-Cc--eeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD-GM--KVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~--~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++.... +. .+++|.+.... ......+..|++... .+++||+++|+|.+
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (270)
T cd05047 6 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 85 (270)
T ss_pred CCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHH
Confidence 5688999998754 32 46778765322 222345555555422 26899999999998
Q ss_pred ccccCC---------------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSN---------------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+++... ..+++.++..++.+++.|++||| ..+++||||||+||++++++.+|++|||+++..
T Consensus 86 ~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~ 162 (270)
T cd05047 86 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQ 162 (270)
T ss_pred HHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCcccc
Confidence 886421 24789999999999999999999 678999999999999999999999999998632
Q ss_pred cccCCC--c--------c----ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccc
Q 041082 527 LKEDQS--F--------T----QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNL 582 (639)
Q Consensus 527 ~~~~~~--~--------~----~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 582 (639)
...... . + ....+.++||| | | |..|... .+..+..... +.. .
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~-----~~~~~~~~~~-~~~--------~ 228 (270)
T cd05047 163 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-----MTCAELYEKL-PQG--------Y 228 (270)
T ss_pred chhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccc-----cCHHHHHHHH-hCC--------C
Confidence 211000 0 0 00112256666 4 3 5555432 1111111111 000 0
Q ss_pred cccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 583 LSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
..+.+..+...+.+++.+|++.+|.+||++.+++++|+++.
T Consensus 229 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 ------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00011123345788999999999999999999999998763
No 94
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.75 E-value=3.3e-18 Score=174.31 Aligned_cols=203 Identities=25% Similarity=0.347 Sum_probs=128.2
Q ss_pred CCcCcceEEEecC---------------CceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhh
Q 041082 407 SGFGSIYKARIQD---------------GMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLV 450 (639)
Q Consensus 407 ~g~g~vy~~~l~~---------------g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv 450 (639)
.++|.||.+...+ ...+|+|.+.... ......|..|++.++ .+|
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv 95 (295)
T cd05097 16 GQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMI 95 (295)
T ss_pred CCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEE
Confidence 4578888766432 1358899876432 222345666766643 268
Q ss_pred hhcCCCCCchhccccCC-----------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecc
Q 041082 451 LEYMPHGSLEKCLYSSN-----------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSD 519 (639)
Q Consensus 451 ~ey~~~gsL~~~l~~~~-----------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~d 519 (639)
|||+++++|.+++.... ..++|.++.+++.++++|++||| ..+++||||||+||++++++.+|++|
T Consensus 96 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~d 172 (295)
T cd05097 96 TEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIAD 172 (295)
T ss_pred EecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecc
Confidence 99999999998875321 23789999999999999999999 67899999999999999999999999
Q ss_pred ccccccccccCCCc--cc---------------cccccccccccCCCCCCCccCCCccchHHHHHh--hCCCCc---cee
Q 041082 520 FGMAKLLLKEDQSF--TQ---------------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND--LLPISV---MEV 577 (639)
Q Consensus 520 fgla~~~~~~~~~~--~~---------------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~--~~~~~~---~~~ 577 (639)
||+++.+....... .. ...+.++||| +.|..+.+.... ..|... .+.
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw-----------SlG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 173 FGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVW-----------AFGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred cccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHH-----------HHHHHHHHHHHcCCCCCCcccChHHH
Confidence 99997653322100 00 0012245555 333333222210 001000 000
Q ss_pred e-------eccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 578 V-------DVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 578 ~-------d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
+ +...... ....+......+.+++.+|++.+|++||+|.+|++.|+
T Consensus 242 ~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 242 IENTGEFFRNQGRQI---YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHhhhhccccc---cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0 0000000 00001122357889999999999999999999999886
No 95
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.75 E-value=4.9e-18 Score=171.94 Aligned_cols=197 Identities=23% Similarity=0.382 Sum_probs=131.1
Q ss_pred CCcCcceEEEecC------CceeeeEEechhhhh-hhhhHHHHHHHHHh--------------------hhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQD------GMKVAVKVFDLQYER-AFKSFDVACDMMKK--------------------LVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~------g~~vavK~l~~~~~~-~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL 459 (639)
.++|.||++...+ +..+|+|.+...... ....+..|....+. +++||+++++|
T Consensus 16 G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l 95 (283)
T cd05091 16 DRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDL 95 (283)
T ss_pred CCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcH
Confidence 4688999998643 478999998744322 22345555555322 46789999999
Q ss_pred hhccccC---------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccc
Q 041082 460 EKCLYSS---------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524 (639)
Q Consensus 460 ~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~ 524 (639)
.+++... ...+++..+.+++.++++||+|+| ..+|+||||||.||++++++.+|++|||+++
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 172 (283)
T cd05091 96 HEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFR 172 (283)
T ss_pred HHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCceEeccccccc
Confidence 8887421 134788889999999999999999 6789999999999999999999999999988
Q ss_pred cccccCCCc-------------c----ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCccee
Q 041082 525 LLLKEDQSF-------------T----QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEV 577 (639)
Q Consensus 525 ~~~~~~~~~-------------~----~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 577 (639)
.+....... + ....+.++||| | | |..|... ....++..........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-----~~~~~~~~~i~~~~~~-- 245 (283)
T cd05091 173 EVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG-----YSNQDVIEMIRNRQVL-- 245 (283)
T ss_pred ccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC-----CCHHHHHHHHHcCCcC--
Confidence 654322100 0 00112256666 5 3 4444321 1111222211111100
Q ss_pred eeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 578 VDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 578 ~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
..+..+...+.+++..|++.+|++||+|.+|+++|+
T Consensus 246 -------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 246 -------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred -------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 011234455788999999999999999999999986
No 96
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.75 E-value=2.9e-18 Score=171.27 Aligned_cols=197 Identities=24% Similarity=0.393 Sum_probs=137.4
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhccccC-
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCLYSS- 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l~~~- 466 (639)
.++|.||++...++..+++|.+..... ....+..|+..++ .++|||+++++|.++++..
T Consensus 17 g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~ 95 (260)
T cd05070 17 GQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGE 95 (260)
T ss_pred ccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcC
Confidence 568899999988888899998865332 2345666665533 3789999999999988753
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------------c
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------------T 534 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------------~ 534 (639)
...+++.++.+++.+++.|++||| ..+++||||||+||++++++.++++|||+++......... +
T Consensus 96 ~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aP 172 (260)
T cd05070 96 GRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAP 172 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccCh
Confidence 345899999999999999999999 6679999999999999999999999999997654322110 0
Q ss_pred c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++|+| | | |+.|..+. ......++.....+ .+.+......+
T Consensus 173 E~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~--~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 232 (260)
T cd05070 173 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM--NNREVLEQVERGYR------------------MPCPQDCPISL 232 (260)
T ss_pred HHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHcCCC------------------CCCCCcCCHHH
Confidence 0 0112256777 5 4 55554321 11111111110000 00112233467
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
.+++.+|+..+|++||||.++.+.|+.
T Consensus 233 ~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 233 HELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 889999999999999999999998874
No 97
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.75 E-value=4.9e-18 Score=173.76 Aligned_cols=220 Identities=25% Similarity=0.329 Sum_probs=132.7
Q ss_pred CCcCcceEEEec-CCc--eeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGM--KVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~--~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... ++. .+++|.+.... ......+..|+..+. .+|+||+++|+|.+
T Consensus 18 G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 97 (303)
T cd05088 18 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 97 (303)
T ss_pred CCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHH
Confidence 468899999864 343 45777654322 222345555655422 26789999999999
Q ss_pred ccccCC---------------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSN---------------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+++... ..+++.++..++.+++.|++||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 98 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 174 (303)
T cd05088 98 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQ 174 (303)
T ss_pred HHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcEEeCccccCccc
Confidence 886421 25789999999999999999999 678999999999999999999999999998643
Q ss_pred cccCCCccc--cccccccccc-cCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeeccccccccccccchHHHHHH
Q 041082 527 LKEDQSFTQ--NTNTCHHRIY-GTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 527 ~~~~~~~~~--~~~~~~~dvy-Gtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
......... ........++ +....+..|+|+.|..+.+.+. ...|.. ..+.++...... ..+.+......
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 251 (303)
T cd05088 175 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---RLEKPLNCDDE 251 (303)
T ss_pred chhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC---cCCCCCCCCHH
Confidence 211100000 0000000010 1111222344444444444432 222211 001110000000 00011122345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTRLLKIRDLL 632 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~~ 632 (639)
+.+++.+|++.+|++||++.+++++++++...-
T Consensus 252 ~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 252 VYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 778999999999999999999999999876543
No 98
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.75 E-value=2.6e-18 Score=181.48 Aligned_cols=217 Identities=22% Similarity=0.311 Sum_probs=153.1
Q ss_pred CcCcceEEEe-cCC----ceeeeEEechhh-hhhhhhHHHHHHHH-------------------HhhhhhcCCCCCchhc
Q 041082 408 GFGSIYKARI-QDG----MKVAVKVFDLQY-ERAFKSFDVACDMM-------------------KKLVLEYMPHGSLEKC 462 (639)
Q Consensus 408 g~g~vy~~~l-~~g----~~vavK~l~~~~-~~~~~~f~~e~~~~-------------------~~Lv~ey~~~gsL~~~ 462 (639)
.||.||+|.+ +.| .+||+|++.... .+...++..+.-.| -.||.+|||.|.|.++
T Consensus 708 AfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP~G~LlDy 787 (1177)
T KOG1025|consen 708 AFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMPLGCLLDY 787 (1177)
T ss_pred cceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhcccchHHHH
Confidence 4899999986 554 578888875332 22334444443332 2478999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcccccccc--
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTC-- 540 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~-- 540 (639)
++.++..+.-...+.+..|||+||.||| ...++||||-++|||+..-..+||.|||+|+++..+..+.....+..
T Consensus 788 vr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pi 864 (1177)
T KOG1025|consen 788 VREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPI 864 (1177)
T ss_pred HHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCc
Confidence 9887767777778999999999999999 77899999999999999999999999999999887654321111111
Q ss_pred ccccc-c---CCCCCCCccCCCccchHHHHHh-hCCCC---cceeeeccccccccccccchHHHHHHHHHHHhhccCCCC
Q 041082 541 HHRIY-G---TRRNPQMNFFSGEMTLKSWVND-LLPIS---VMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESP 612 (639)
Q Consensus 541 ~~dvy-G---tg~~p~~~~~~~~~~l~~~~~~-~~~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p 612 (639)
|+-.- - -...+.+|+|+.|+.+|+.++- +-|.. ..|+=|- . +.+++...++.|...|..++++||..++
T Consensus 865 kwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl--l-e~geRLsqPpiCtiDVy~~mvkCwmid~ 941 (1177)
T KOG1025|consen 865 KWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL--L-EKGERLSQPPICTIDVYMVMVKCWMIDA 941 (1177)
T ss_pred HHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH--H-hccccCCCCCCccHHHHHHHHHHhccCc
Confidence 00000 0 1123555667777777776643 22332 2233221 1 1112345678899999999999999999
Q ss_pred CCCCCHHHHHHHHHHhHH
Q 041082 613 KQRINAKESVTRLLKIRD 630 (639)
Q Consensus 613 ~~RP~m~~v~~~l~~~~~ 630 (639)
+.||++++...+..++..
T Consensus 942 ~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 942 DSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred ccCccHHHHHHHHHHHhc
Confidence 999999999998887643
No 99
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.75 E-value=3.7e-18 Score=174.18 Aligned_cols=203 Identities=24% Similarity=0.385 Sum_probs=132.4
Q ss_pred CCcCcceEEEecC-C--ceeeeEEechh-hhhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD-G--MKVAVKVFDLQ-YERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g--~~vavK~l~~~-~~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++.... + ..+++|.+... .......+..|+.... .+++||+++|+|.+
T Consensus 13 g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 92 (297)
T cd05089 13 GNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLD 92 (297)
T ss_pred CCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHH
Confidence 5689999998753 3 24677776532 1222344555554421 26789999999998
Q ss_pred ccccCC---------------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSN---------------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+++... ..+++....+++.+++.|++||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 93 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 169 (297)
T cd05089 93 FLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGE 169 (297)
T ss_pred HHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeEEECCcCCCccc
Confidence 886421 24788999999999999999999 678999999999999999999999999998643
Q ss_pred cccCCC--c--------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccc
Q 041082 527 LKEDQS--F--------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNL 582 (639)
Q Consensus 527 ~~~~~~--~--------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 582 (639)
...... . +. ...+.++||| | | |+.|.... ...++.... ....
T Consensus 170 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~-----~~~~~~~~~---------~~~~ 235 (297)
T cd05089 170 EVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM-----TCAELYEKL---------PQGY 235 (297)
T ss_pred cceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH---------hcCC
Confidence 211000 0 00 0112256666 4 3 44444311 111111110 0000
Q ss_pred cccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 041082 583 LSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDLL 632 (639)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~~ 632 (639)
. ...+..+...+.+++.+|++.+|.+||++.+|+++|+.+.+..
T Consensus 236 ~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 236 R------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred C------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 0 0011123345778999999999999999999999999887655
No 100
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.75 E-value=3.3e-18 Score=170.87 Aligned_cols=197 Identities=22% Similarity=0.368 Sum_probs=136.1
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhcccc-C
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCLYS-S 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l~~-~ 466 (639)
.++|.||++...++..+++|.+...... ...+..|+..++ .+++||+++|+|.+++.. .
T Consensus 17 G~~g~v~~~~~~~~~~~a~K~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05067 17 GQFGEVWMGYYNGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPE 95 (260)
T ss_pred CccceEEeeecCCCceEEEEEecCCCCc-HHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcC
Confidence 5688999999888999999998754332 345666665543 368899999999998865 3
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------c------
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------T------ 534 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------~------ 534 (639)
...+++.++..++.+++.||+||| ..+++||||||+||+++.++.++++|||+++......... +
T Consensus 96 ~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~p 172 (260)
T cd05067 96 GIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 172 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCH
Confidence 346899999999999999999999 6789999999999999999999999999997655221110 0
Q ss_pred c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++|+| | | |+.|..+. ....+.+....... .+.+......+
T Consensus 173 e~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 232 (260)
T cd05067 173 EAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM--TNPEVIQNLERGYR------------------MPRPDNCPEEL 232 (260)
T ss_pred HHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHcCCC------------------CCCCCCCCHHH
Confidence 0 0112245666 4 4 55554321 01111111100000 00011123458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
.+++.+|+..+|++||++.++...|+.
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 233 YELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 889999999999999999999999874
No 101
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.75 E-value=4.3e-18 Score=171.09 Aligned_cols=201 Identities=23% Similarity=0.335 Sum_probs=136.1
Q ss_pred CCcCcceEEEecCC----ceeeeEEechhh-hhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQDG----MKVAVKVFDLQY-ERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~g----~~vavK~l~~~~-~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++...+. ..+++|...... ......+..|+..++ .+|+||+++|+|.++
T Consensus 17 g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~ 96 (270)
T cd05056 17 GQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELAPLGELRSY 96 (270)
T ss_pred ccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcCCCCcHHHH
Confidence 56889999886432 468888775443 233345666666533 368899999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-cc-------
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-FT------- 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-~~------- 534 (639)
+......++|.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||+++........ .+
T Consensus 97 l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 173 (270)
T cd05056 97 LQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIK 173 (270)
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCcccc
Confidence 8764456899999999999999999999 678999999999999999999999999999865433211 00
Q ss_pred ----c----cccccccccc--c--------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 535 ----Q----NTNTCHHRIY--G--------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 535 ----~----~~~~~~~dvy--G--------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
. ...+.++||| | +|+.|..... ......+.... . ....+..+
T Consensus 174 y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~--~~~~~~~~~~~--~----------------~~~~~~~~ 233 (270)
T cd05056 174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK--NNDVIGRIENG--E----------------RLPMPPNC 233 (270)
T ss_pred ccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHcC--C----------------cCCCCCCC
Confidence 0 0011245555 3 2444432211 00111111100 0 00111233
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
...+.+++.+|+..+|++||++.+++..|+.++.
T Consensus 234 ~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 234 PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 4467788899999999999999999999998764
No 102
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.75 E-value=3.9e-18 Score=161.23 Aligned_cols=117 Identities=28% Similarity=0.356 Sum_probs=90.5
Q ss_pred CcCcceEEEec-CCceeeeEEechhhh-hhhhh-HHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKS-FDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~-f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.+|.||+++-. .|+.||||++-.+.. ...+. ..+|+++++ +||+||++..-|.++ .
T Consensus 14 SYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eL-e 92 (396)
T KOG0593|consen 14 SYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHEL-E 92 (396)
T ss_pred cceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHH-H
Confidence 47899999875 489999999865432 22222 234555533 279999988544433 2
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
.....++.....++..++++|+.|.| +..++||||||.|||+..++.+|+||||+||.+..
T Consensus 93 ~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 93 RYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred hccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 22334777888999999999999999 78899999999999999999999999999999873
No 103
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.75 E-value=6.6e-19 Score=178.81 Aligned_cols=214 Identities=22% Similarity=0.314 Sum_probs=142.2
Q ss_pred cCcceEEEecCCceeeeEEechhhhhhhhhHHH-----------HHHH--HHhhhhhcCCCCCchhccccCCccCCHHHH
Q 041082 409 FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDV-----------ACDM--MKKLVLEYMPHGSLEKCLYSSNYILDIFQR 475 (639)
Q Consensus 409 ~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~-----------e~~~--~~~Lv~ey~~~gsL~~~l~~~~~~l~~~~~ 475 (639)
-|.||.|.+. +..||||+++.......+.... .|.. .-.+||||++.|-|+..|+... .+.....
T Consensus 137 QGAVF~Grl~-netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~-~itp~ll 214 (904)
T KOG4721|consen 137 QGAVFLGRLH-NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGR-PITPSLL 214 (904)
T ss_pred ccceeeeecc-CceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccC-ccCHHHH
Confidence 4779999987 5689999876443322222111 0000 1137999999999999998654 4566667
Q ss_pred HHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccccccccc---cccc-cCCCCC
Q 041082 476 LNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH---HRIY-GTRRNP 551 (639)
Q Consensus 476 ~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~~---~dvy-Gtg~~p 551 (639)
+.+..+||.||.||| ...|||||||+-|||+..+-.+||+|||-++.+.+.....+ ..+|.. ..|- -..-..
T Consensus 215 v~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMS-FaGTVaWMAPEvIrnePcsE 290 (904)
T KOG4721|consen 215 VDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMS-FAGTVAWMAPEVIRNEPCSE 290 (904)
T ss_pred HHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhh-hhhhHhhhCHHHhhcCCccc
Confidence 888899999999999 78899999999999999999999999999987765432111 111210 0000 011112
Q ss_pred CCccCCCccchHHHHHhhCCCC-cce--e---eeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 552 QMNFFSGEMTLKSWVNDLLPIS-VME--V---VDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 552 ~~~~~~~~~~l~~~~~~~~~~~-~~~--~---~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
.-|+|+.|+.||+..+.-+|.. +.. + |-.+... ...+.+|...+.-|+.+||+..|+.||++++|+..|
T Consensus 291 KVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~-----LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 291 KVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLH-----LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred ccceehhHHHHHHHHhcCCCccccchheeEEeccCCccc-----ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 2344667777777776666653 111 0 1111111 123567777888888999999999999999999988
Q ss_pred HHhHHHHH
Q 041082 626 LKIRDLLL 633 (639)
Q Consensus 626 ~~~~~~~~ 633 (639)
.-....++
T Consensus 366 dIa~pell 373 (904)
T KOG4721|consen 366 DIASPELL 373 (904)
T ss_pred hhcCHHHh
Confidence 76655443
No 104
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.75 E-value=3.5e-18 Score=172.69 Aligned_cols=197 Identities=28% Similarity=0.449 Sum_probs=134.2
Q ss_pred CCcCcceEEEecC------CceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQD------GMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~------g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++...+ +..+++|.+...... ....+..|+++++ .+|+||+++|+|
T Consensus 16 g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 95 (280)
T cd05049 16 GAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDL 95 (280)
T ss_pred cCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCH
Confidence 4678899987643 378999998654433 3456777776643 267999999999
Q ss_pred hhccccC-------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 460 EKCLYSS-------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 460 ~~~l~~~-------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.+++... ...++|.+...++.+++.|++||| ..+++||||||+||+++.++.++++|||+++..
T Consensus 96 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~ 172 (280)
T cd05049 96 NKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDV 172 (280)
T ss_pred HHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeEEECCcccceec
Confidence 9988642 234789999999999999999999 668999999999999999999999999999765
Q ss_pred cccCCC--cc-----------c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeee
Q 041082 527 LKEDQS--FT-----------Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVD 579 (639)
Q Consensus 527 ~~~~~~--~~-----------~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d 579 (639)
...... .. . ...+.++||| | | |+.|.... ....+.+++.. .. ..
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~--~~~~~~~~~~~---~~-~~--- 243 (280)
T cd05049 173 YTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL--SNEEVIECITQ---GR-LL--- 243 (280)
T ss_pred ccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHc---CC-cC---
Confidence 332210 00 0 0112246666 4 4 55554321 11111111110 00 00
Q ss_pred ccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 580 VNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 580 ~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
..+......+.+++.+|++.+|++||++.||+++|+
T Consensus 244 -----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 244 -----------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred -----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 001123346788999999999999999999999885
No 105
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.74 E-value=3.1e-18 Score=172.56 Aligned_cols=180 Identities=20% Similarity=0.290 Sum_probs=116.7
Q ss_pred ceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccCCccCCHHHHHHHHH
Q 041082 421 MKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMI 480 (639)
Q Consensus 421 ~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~ 480 (639)
..+++|.++.........|..+...++ .+|+||+++|+|..++......+++..+.+++.
T Consensus 45 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~ 124 (274)
T cd05076 45 LRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQ 124 (274)
T ss_pred eeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence 458888887655444445555554432 378999999999988876455688999999999
Q ss_pred HHHHhhhhhhccCCCCeEeecCCCCceeecCCc-------ceeeccccccccccccCCC-------ccc-----cccccc
Q 041082 481 DVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-------VAHLSDFGMAKLLLKEDQS-------FTQ-----NTNTCH 541 (639)
Q Consensus 481 ~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-------~~~i~dfgla~~~~~~~~~-------~~~-----~~~~~~ 541 (639)
++|+||+||| ..+|+||||||+||++++++ .++++|||+++........ .+. ...+.+
T Consensus 125 qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~ 201 (274)
T cd05076 125 QLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTA 201 (274)
T ss_pred HHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcH
Confidence 9999999999 66899999999999997643 4799999988654322110 000 011224
Q ss_pred cccc--c--------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHHHhhccCCC
Q 041082 542 HRIY--G--------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAES 611 (639)
Q Consensus 542 ~dvy--G--------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~ 611 (639)
+||| | +|+.|...... .....+ ++.... .+......+.+++.+|++.+
T Consensus 202 ~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~------------~~~~~~--------~~~~~~~~~~~li~~cl~~~ 259 (274)
T cd05076 202 ADKWSFGTTLLEICFDGEVPLKERTP--SEKERF------------YEKKHR--------LPEPSCKELATLISQCLTYE 259 (274)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccCh--HHHHHH------------HHhccC--------CCCCCChHHHHHHHHHcccC
Confidence 5555 4 24433321100 000000 000000 00011235778999999999
Q ss_pred CCCCCCHHHHHHHH
Q 041082 612 PKQRINAKESVTRL 625 (639)
Q Consensus 612 p~~RP~m~~v~~~l 625 (639)
|++||+|.+|++.|
T Consensus 260 p~~Rps~~~il~~L 273 (274)
T cd05076 260 PTQRPSFRTILRDL 273 (274)
T ss_pred hhhCcCHHHHHHhh
Confidence 99999999999876
No 106
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.74 E-value=5.3e-18 Score=174.24 Aligned_cols=116 Identities=26% Similarity=0.282 Sum_probs=93.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..|+..++ .+|+||+++|+|.++
T Consensus 4 G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 83 (312)
T cd05585 4 GSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHH 83 (312)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHH
Confidence 468899998865 578899999865432 22234445555432 368999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+... ..+++.....++.++++||+||| +.+|+||||||+||+++.++.++|+|||+++..
T Consensus 84 l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~ 143 (312)
T cd05585 84 LQRE-GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLN 143 (312)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence 8653 35889999999999999999999 678999999999999999999999999999864
No 107
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.74 E-value=4.3e-18 Score=180.00 Aligned_cols=156 Identities=17% Similarity=0.204 Sum_probs=93.4
Q ss_pred cCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc--ccccc---cccc
Q 041082 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT--QNTNT---CHHR 543 (639)
Q Consensus 469 ~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~--~~~~~---~~~d 543 (639)
.++|..+.+++.++|+|++||| ..+|+||||||+||+++.++.+|++|||+++.......... ....+ ....
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE 309 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE 309 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChh
Confidence 4788889999999999999999 67899999999999999999999999999986543221100 00000 0000
Q ss_pred cc-cCCCCCCCccCCCccchHHHHH-hhCCCCc---ceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 041082 544 IY-GTRRNPQMNFFSGEMTLKSWVN-DLLPISV---MEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINA 618 (639)
Q Consensus 544 vy-Gtg~~p~~~~~~~~~~l~~~~~-~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m 618 (639)
++ |....+..|+|+.|..+.+... ...|... .+.+-..+... .....+..+...+.+++.+|++.+|++||+|
T Consensus 310 ~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 387 (400)
T cd05105 310 SIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSG--YRMAKPDHATQEVYDIMVKCWNSEPEKRPSF 387 (400)
T ss_pred hhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcC--CCCCCCccCCHHHHHHHHHHCccCHhHCcCH
Confidence 01 1111222333333443333321 1112110 00000000000 0011122344568889999999999999999
Q ss_pred HHHHHHHHHhH
Q 041082 619 KESVTRLLKIR 629 (639)
Q Consensus 619 ~~v~~~l~~~~ 629 (639)
.+|+++|+++.
T Consensus 388 ~~l~~~l~~l~ 398 (400)
T cd05105 388 LHLSDIVESLL 398 (400)
T ss_pred HHHHHHHHHHc
Confidence 99999998753
No 108
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.74 E-value=1.1e-17 Score=168.77 Aligned_cols=193 Identities=25% Similarity=0.356 Sum_probs=132.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+++|.++... ......+..++..++ .+|+||+++++|.+++.
T Consensus 15 g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 94 (277)
T cd06642 15 GSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK 94 (277)
T ss_pred CCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhh
Confidence 467899999764 57889999876433 222345555655532 37899999999998886
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF----------- 533 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~----------- 533 (639)
. ..+++.....++.++++|++||| ..+++|+||+|+||+++.++.++++|||+++.+.......
T Consensus 95 ~--~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 169 (277)
T cd06642 95 P--GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 169 (277)
T ss_pred c--CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccC
Confidence 4 35889999999999999999999 6789999999999999999999999999997654322100
Q ss_pred c----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 534 T----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 534 ~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
+ ....+.++||| | ||+.|..+.... ....++ ... ..+.+ ...+...+
T Consensus 170 PE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~----~~~----~~~~~----------~~~~~~~~ 229 (277)
T cd06642 170 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--RVLFLI----PKN----SPPTL----------EGQYSKPF 229 (277)
T ss_pred HHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--hHHhhh----hcC----CCCCC----------CcccCHHH
Confidence 0 00112367777 5 666665432111 000010 000 00111 11234457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+++.+|++.+|++||+|.+|+++
T Consensus 230 ~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 230 KEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHccCCcccCcCHHHHHHh
Confidence 788999999999999999999973
No 109
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.74 E-value=7.8e-18 Score=168.99 Aligned_cols=196 Identities=22% Similarity=0.321 Sum_probs=131.1
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
+++|.||++... ++..+++|.+..........+..|+.+++ .+++||+++++|.+++..
T Consensus 19 g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 98 (268)
T cd06624 19 GTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRS 98 (268)
T ss_pred CCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHH
Confidence 468899999854 56789999887665555556666666633 268899999999998875
Q ss_pred CCccC--CHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-CcceeeccccccccccccCCC----------
Q 041082 466 SNYIL--DIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLKEDQS---------- 532 (639)
Q Consensus 466 ~~~~l--~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~~~~~---------- 532 (639)
....+ ++..+..++.++++|++||| ..+|+||||||+||+++. ++.++++|||++.........
T Consensus 99 ~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 175 (268)
T cd06624 99 KWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQY 175 (268)
T ss_pred hcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccc
Confidence 43345 78888999999999999999 678999999999999986 679999999998765322110
Q ss_pred -ccc------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 533 -FTQ------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 533 -~~~------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
.+. ...+.++||| | +|+.|....- ......|...... ..+ ..+...
T Consensus 176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~--~~~~~~~~~~~~~------~~~----------~~~~~~ 237 (268)
T cd06624 176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELG--EPQAAMFKVGMFK------IHP----------EIPESL 237 (268)
T ss_pred cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcccc--ChhhhHhhhhhhc------cCC----------CCCccc
Confidence 000 0012356666 5 5665543210 0000111000000 000 011122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...+.+++.+|++.+|++||+|.|+++
T Consensus 238 ~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 238 SAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 345677889999999999999999875
No 110
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.74 E-value=6e-18 Score=168.47 Aligned_cols=195 Identities=23% Similarity=0.274 Sum_probs=131.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++... ++..+++|.+.... ......+..++..++ .+|+||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 90 (256)
T cd08529 11 GSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLL 90 (256)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHH
Confidence 457889999864 57899999886542 222344555555432 3689999999999998
Q ss_pred ccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc-------
Q 041082 464 YSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ------- 535 (639)
Q Consensus 464 ~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~------- 535 (639)
+.. ...+++.+..+++.+++.|++||| ..+++|||||++||+++.++.++++|||+++.+.........
T Consensus 91 ~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y 167 (256)
T cd08529 91 KMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYY 167 (256)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccc
Confidence 763 456899999999999999999999 678999999999999999999999999998866433211000
Q ss_pred --------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 536 --------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 536 --------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
...+.++|+| | ||+.|.... .......++ .... . .........
T Consensus 168 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--~~~~~~~~~---~~~~----~-----------~~~~~~~~~ 227 (256)
T cd08529 168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDAN--NQGALILKI---IRGV----F-----------PPVSQMYSQ 227 (256)
T ss_pred cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCC--CHHHHHHHH---HcCC----C-----------CCCccccCH
Confidence 0112256666 4 555554321 001111111 0000 0 000112334
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+.+++.+|++.+|++||+|.++++.
T Consensus 228 ~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 228 QLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHHHHccCCcccCcCHHHHhhC
Confidence 67889999999999999999999863
No 111
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.74 E-value=4.3e-18 Score=174.53 Aligned_cols=208 Identities=26% Similarity=0.336 Sum_probs=133.7
Q ss_pred CCcCcceEEEecC--------CceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCC
Q 041082 407 SGFGSIYKARIQD--------GMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPH 456 (639)
Q Consensus 407 ~g~g~vy~~~l~~--------g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~ 456 (639)
.++|.||++...+ ...+|+|.+.... ......+..++..++ .+|+||+++
T Consensus 29 G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 108 (307)
T cd05098 29 GCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 108 (307)
T ss_pred CCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCC
Confidence 4588899886432 2468999886432 222344555555432 268999999
Q ss_pred CCchhccccC---------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccc
Q 041082 457 GSLEKCLYSS---------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFG 521 (639)
Q Consensus 457 gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfg 521 (639)
|+|.+++... ...++|.++.+++.+++.||+||| ..+++||||||+||+++.++.+|++|||
T Consensus 109 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~dfg 185 (307)
T cd05098 109 GNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFG 185 (307)
T ss_pred CcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEcCCCcEEECCCc
Confidence 9999988642 124899999999999999999999 6789999999999999999999999999
Q ss_pred ccccccccCCC-----cc--------c----cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeec
Q 041082 522 MAKLLLKEDQS-----FT--------Q----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDV 580 (639)
Q Consensus 522 la~~~~~~~~~-----~~--------~----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~ 580 (639)
+++........ .. . ...+.++||| +-|..+.+++. ...|.. ..++++.
T Consensus 186 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw-----------slG~~l~el~~~g~~p~~~~~~~~~~~~ 254 (307)
T cd05098 186 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW-----------SFGVLLWEIFTLGGSPYPGVPVEELFKL 254 (307)
T ss_pred ccccccccchhhccccCCCccceeChHHhccCCCCcHHHHH-----------HHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 99765422110 00 0 0012245555 33333333221 111110 0000000
Q ss_pred cccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 581 NLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 581 ~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
+... ...+.+..+...+.+++.+|++.+|++||+|.+|++.|.++...
T Consensus 255 -~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 255 -LKEG--HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -HHcC--CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 0000 00011223345677899999999999999999999999988654
No 112
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.74 E-value=5.1e-18 Score=173.60 Aligned_cols=203 Identities=23% Similarity=0.334 Sum_probs=136.3
Q ss_pred CCcCcceEEEec-CCc----eeeeEEechhhh-hhhhhHHHHHHHHH-------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGM----KVAVKVFDLQYE-RAFKSFDVACDMMK-------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~----~vavK~l~~~~~-~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .|. .+++|.+..... .....+..++..++ .++++|+++|+|.+
T Consensus 18 G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~~~g~l~~ 97 (303)
T cd05110 18 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLD 97 (303)
T ss_pred CCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhcCCCCHHH
Confidence 457899999763 343 468887754322 11224445554432 26889999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--cc-----
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--FT----- 534 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--~~----- 534 (639)
++......+++..+..++.++++||+||| ..+|+||||||+||+++.++.+|++|||+++........ ..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~ 174 (303)
T cd05110 98 YVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 174 (303)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccc
Confidence 88765556899999999999999999999 678999999999999999999999999999865432210 00
Q ss_pred ------c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 535 ------Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 535 ------~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
. ...+.++||| | | |+.|..... ...+.+++.... .. ..+.
T Consensus 175 ~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~----------~~--------~~~~ 234 (303)
T cd05110 175 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEKGE----------RL--------PQPP 234 (303)
T ss_pred cccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCCC----------CC--------CCCC
Confidence 0 0112256777 5 3 555543210 111222221100 00 0011
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDLL 632 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~~ 632 (639)
.+...+.+++..|+..+|++||+|.++++.+.++....
T Consensus 235 ~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 235 ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 23446788999999999999999999999999875443
No 113
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.74 E-value=3.1e-18 Score=172.80 Aligned_cols=197 Identities=21% Similarity=0.356 Sum_probs=128.6
Q ss_pred CCcCcceEEEec------CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+|+|.+.... ......+..|...++ .+|+||+++|+|
T Consensus 17 G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L 96 (277)
T cd05062 17 GSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDL 96 (277)
T ss_pred ccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCH
Confidence 467889987653 24679999875322 122334555555533 268999999999
Q ss_pred hhccccC---------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 460 EKCLYSS---------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 460 ~~~l~~~---------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
.+++... ...++|.++..++.++|.|++||| ..+++||||||+||++++++.++++|||+++......
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 173 (277)
T cd05062 97 KSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 173 (277)
T ss_pred HHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcc
Confidence 9887641 124688899999999999999999 6789999999999999999999999999987553322
Q ss_pred CCc-------------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeecccc
Q 041082 531 QSF-------------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLL 583 (639)
Q Consensus 531 ~~~-------------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 583 (639)
... +. ...+.++||| | | |..|.... ...+........ ...
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~-----~~~~~~~~~~~~--------~~~ 240 (277)
T cd05062 174 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM-----SNEQVLRFVMEG--------GLL 240 (277)
T ss_pred eeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHcC--------CcC
Confidence 110 00 0112245665 4 3 33333211 111111110000 000
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
..+..+...+.+++.+|++.+|++||++.|++++|+
T Consensus 241 -------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 241 -------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 011223446788999999999999999999999886
No 114
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.74 E-value=6.5e-18 Score=167.76 Aligned_cols=197 Identities=25% Similarity=0.408 Sum_probs=134.4
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++...++..+++|.+...... ....+..+++..+ .+|+||+++++|.+++..
T Consensus 6 g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~ 85 (251)
T cd05041 6 GNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRK 85 (251)
T ss_pred CCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHh
Confidence 4678999999877899999987654332 3345666666533 268899999999999876
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-----------
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT----------- 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~----------- 534 (639)
....+++..+..++.+++.|++||| ..+++||||||+||+++.++.+|++|||+++..........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~ 162 (251)
T cd05041 86 KKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWT 162 (251)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccC
Confidence 4456889999999999999999999 66799999999999999999999999999986542211100
Q ss_pred --c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 535 --Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 535 --~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
. ...+.++|+| | | |..|..... .......+ .... ....+.....
T Consensus 163 ~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~--~~~~~~~~------------~~~~------~~~~~~~~~~ 222 (251)
T cd05041 163 APEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS--NQQTRERI------------ESGY------RMPAPQLCPE 222 (251)
T ss_pred ChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC--HHHHHHHH------------hcCC------CCCCCccCCH
Confidence 0 0112245555 4 3 333332110 00000111 0000 0001122344
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
.+.+++.+|+..+|++||++.|+++.|.
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 6888999999999999999999999885
No 115
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.74 E-value=7.4e-18 Score=168.57 Aligned_cols=202 Identities=19% Similarity=0.252 Sum_probs=126.8
Q ss_pred CCcCcceEEEecC-------------CceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhc
Q 041082 407 SGFGSIYKARIQD-------------GMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEY 453 (639)
Q Consensus 407 ~g~g~vy~~~l~~-------------g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey 453 (639)
.++|.||++.+.. ...+++|.++.........|..++..++ .+++||
T Consensus 6 G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 85 (262)
T cd05077 6 GTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEF 85 (262)
T ss_pred CCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEec
Confidence 4578889887532 2358888876654444445555554432 368999
Q ss_pred CCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcc-------eeeccccccccc
Q 041082 454 MPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMV-------AHLSDFGMAKLL 526 (639)
Q Consensus 454 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~-------~~i~dfgla~~~ 526 (639)
+++|+|..+++.....+++..+.+++.++|+|++||| +.+|+||||||.||+++.++. ++++|||++...
T Consensus 86 ~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~ 162 (262)
T cd05077 86 VEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITV 162 (262)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccc
Confidence 9999998888755556899999999999999999999 678999999999999986654 899999998765
Q ss_pred cccCCC-c------cc-----cccccccccccCCCCCCCccCCCccchHHHH-HhhCCCCcceeeec-cccccccccccc
Q 041082 527 LKEDQS-F------TQ-----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWV-NDLLPISVMEVVDV-NLLSMEDKYFTT 592 (639)
Q Consensus 527 ~~~~~~-~------~~-----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~-~~~~~~~~~~~~d~-~l~~~~~~~~~~ 592 (639)
...... . +. ...+.++||| +.|..+++.+ ....|.......+. ...... ...
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw-----------slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~---~~~ 228 (262)
T cd05077 163 LSRQECVERIPWIAPECVEDSKNLSIAADKW-----------SFGTTLWEICYNGEIPLKDKTLAEKERFYEGQ---CML 228 (262)
T ss_pred cCcccccccccccChhhhcCCCCCCchhHHH-----------HHHHHHHHHHhCCCCCCCCcchhHHHHHHhcC---ccC
Confidence 432111 0 00 0011234555 3333333322 11111110000000 000000 000
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 593 KKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 593 ~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
.......+.+++.+|++.+|++||++.+|++.|
T Consensus 229 ~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 229 VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 001123567889999999999999999998875
No 116
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.74 E-value=7.1e-18 Score=171.93 Aligned_cols=195 Identities=24% Similarity=0.314 Sum_probs=133.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++.. ..+..+++|.+..........+..++..++ .+|+||+++|+|.+++..
T Consensus 31 g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 110 (296)
T cd06654 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110 (296)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh
Confidence 45788999874 467899999987655444455655655532 378999999999998854
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----------T 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----------~ 534 (639)
..+++.++..++.+++.|++||| ..+|+||||||+||+++.++.++|+|||+++......... +
T Consensus 111 --~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 185 (296)
T cd06654 111 --TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185 (296)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCH
Confidence 34789999999999999999999 6689999999999999999999999999987654322110 0
Q ss_pred c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
. ...+.++||| | ||+.|....- ....+... ..... +.+. .+......+.
T Consensus 186 E~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~----~~~~~~~~-~~~~~-----~~~~--------~~~~~~~~l~ 247 (296)
T cd06654 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN----PLRALYLI-ATNGT-----PELQ--------NPEKLSAIFR 247 (296)
T ss_pred HHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC----HHHhHHHH-hcCCC-----CCCC--------CccccCHHHH
Confidence 0 1122367888 6 7777764311 11111110 00000 0000 0111223467
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+++.+|+..+|++||++.||++.
T Consensus 248 ~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 248 DFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHCcCCcccCcCHHHHhhC
Confidence 78899999999999999999973
No 117
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.73 E-value=2.7e-17 Score=166.37 Aligned_cols=117 Identities=29% Similarity=0.444 Sum_probs=96.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++... .+..+++|.+..........+..|++.++ .+|+||+++|++...+..
T Consensus 16 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~ 95 (282)
T cd06643 16 GAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 95 (282)
T ss_pred CCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh
Confidence 457889999875 46788899886654444556666665533 268999999999888765
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
....++|..+..++.++++||+||| ..+++||||||+||+++.++.+|++|||+++..
T Consensus 96 ~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 96 LERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccc
Confidence 4557899999999999999999999 678999999999999999999999999998754
No 118
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.73 E-value=7.7e-18 Score=167.96 Aligned_cols=195 Identities=22% Similarity=0.290 Sum_probs=127.9
Q ss_pred CCcCcceEEEecCCc-----------eeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCC
Q 041082 407 SGFGSIYKARIQDGM-----------KVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPH 456 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~-----------~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~ 456 (639)
.++|.||++...... .+++|.+...... ...|..++..++ .+|+||+++
T Consensus 6 G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~ 84 (259)
T cd05037 6 GTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEEYVKF 84 (259)
T ss_pred cccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEEcCCC
Confidence 457889998876433 4677776544332 345555555532 268899999
Q ss_pred CCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc-------ceeecccccccccccc
Q 041082 457 GSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-------VAHLSDFGMAKLLLKE 529 (639)
Q Consensus 457 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-------~~~i~dfgla~~~~~~ 529 (639)
|+|.+++......+++..+..++.+++.||+||| ..+|+||||||+||+++.++ .+|++|||+++.....
T Consensus 85 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~ 161 (259)
T cd05037 85 GPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161 (259)
T ss_pred CcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccc
Confidence 9999988764446899999999999999999999 67899999999999999887 7999999999875432
Q ss_pred CCCc-------cc------cccccccccccCCCCCCCccCCCccchHHHHHh-hCCCCcce------ee-eccccccccc
Q 041082 530 DQSF-------TQ------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVND-LLPISVME------VV-DVNLLSMEDK 588 (639)
Q Consensus 530 ~~~~-------~~------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~-~~~~~~~~------~~-d~~l~~~~~~ 588 (639)
.... +. ...+.++|+| +-|..+++.+.. ..+....+ .. +.....
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~-----------slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~---- 226 (259)
T cd05037 162 EERVERIPWIAPECIRNGQASLTIAADKW-----------SFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLP---- 226 (259)
T ss_pred cccccCCCccChhhhcCCCCCcchhhHHH-----------HHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCC----
Confidence 1110 00 0112245555 333333332221 11110000 00 000000
Q ss_pred cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 589 ~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
......+.+++.+|+..+|++||+|.+|++.|
T Consensus 227 -----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 227 -----MPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -----CCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 00115678899999999999999999999876
No 119
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.73 E-value=6.8e-18 Score=168.00 Aligned_cols=195 Identities=27% Similarity=0.402 Sum_probs=132.2
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhccccC-
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCLYSS- 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l~~~- 466 (639)
.++|.||++.. .+..+++|....... ...+..|+..++ .+++||+++|+|.+++...
T Consensus 17 g~~g~v~~~~~-~~~~~~iK~~~~~~~--~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~ 93 (254)
T cd05083 17 GEFGAVLQGEY-TGQKVAVKNIKCDVT--AQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRG 93 (254)
T ss_pred CCCCceEeccc-CCCceEEEeecCcch--HHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcC
Confidence 46788998765 567889998754322 234555555532 2689999999999988653
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--------cc---
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF--------TQ--- 535 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~--------~~--- 535 (639)
...+++.++.+++.+++.|++||| ..+++||||||+||+++.++.+|++|||+++......... +.
T Consensus 94 ~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~ 170 (254)
T cd05083 94 RALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALK 170 (254)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhc
Confidence 345899999999999999999999 6789999999999999999999999999987643221110 00
Q ss_pred -cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHHH
Q 041082 536 -NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLA 604 (639)
Q Consensus 536 -~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~ 604 (639)
...+.++|+| | + |+.|... ....++......... . +....+...+.+++
T Consensus 171 ~~~~~~~~Dv~slG~~l~el~~~g~~p~~~-----~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~li 230 (254)
T cd05083 171 HKKFSSKSDVWSYGVLLWEVFSYGRAPYPK-----MSLKEVKECVEKGYR---M------------EPPEGCPADVYVLM 230 (254)
T ss_pred cCCcCchhhHHHHHHHHHHHHhCCCCCCcc-----CCHHHHHHHHhCCCC---C------------CCCCcCCHHHHHHH
Confidence 1112356777 5 3 5555432 111121111100000 0 00112234567899
Q ss_pred hhccCCCCCCCCCHHHHHHHHHH
Q 041082 605 MECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 605 ~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
.+|++.+|++||+|.++++.|++
T Consensus 231 ~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 231 TSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHcCCChhhCcCHHHHHHHHcc
Confidence 99999999999999999998864
No 120
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.73 E-value=1.1e-17 Score=173.59 Aligned_cols=218 Identities=24% Similarity=0.291 Sum_probs=134.2
Q ss_pred CCcCcceEEEecC--------CceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCC
Q 041082 407 SGFGSIYKARIQD--------GMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPH 456 (639)
Q Consensus 407 ~g~g~vy~~~l~~--------g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~ 456 (639)
.++|.||.+.... ...+|+|.+.... ......+..|+..++ .+++||+++
T Consensus 23 G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 102 (334)
T cd05100 23 GCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASK 102 (334)
T ss_pred ccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCC
Confidence 4588899886421 2368899876432 222345556655533 257899999
Q ss_pred CCchhccccC---------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccc
Q 041082 457 GSLEKCLYSS---------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFG 521 (639)
Q Consensus 457 gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfg 521 (639)
|+|.+++... ...++|.++.+++.+++.||+||| ..+++||||||+||+++.++.+|++|||
T Consensus 103 g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg 179 (334)
T cd05100 103 GNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFG 179 (334)
T ss_pred CcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcc
Confidence 9999887531 234889999999999999999999 6789999999999999999999999999
Q ss_pred ccccccccCCCc--ccccc---ccccccc-cCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeecccccccccccc
Q 041082 522 MAKLLLKEDQSF--TQNTN---TCHHRIY-GTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMEDKYFT 591 (639)
Q Consensus 522 la~~~~~~~~~~--~~~~~---~~~~dvy-Gtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~~~~~ 591 (639)
+++......... ..... ..+..++ +.......|+|+.|..+.+++. ...+.. ..+.++. +... ...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~--~~~~ 256 (334)
T cd05100 180 LARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL-LKEG--HRMD 256 (334)
T ss_pred cceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH-HHcC--CCCC
Confidence 998654322110 00000 0001111 1111122333444444444332 111111 0111100 0000 0001
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 592 TKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 592 ~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
.+..+...+.+++.+|++.+|++||+|.|+++.|+++..
T Consensus 257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 257 KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 112334567889999999999999999999999998874
No 121
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.73 E-value=1.9e-17 Score=168.04 Aligned_cols=198 Identities=25% Similarity=0.393 Sum_probs=132.1
Q ss_pred CCcCcceEEEec------CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+++|.+..... .....+..++..++ .+++||+++|+|
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 95 (288)
T cd05050 16 GAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDL 95 (288)
T ss_pred cccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCH
Confidence 468899998753 357899998864432 22345666665533 368899999999
Q ss_pred hhccccC---------------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeec
Q 041082 460 EKCLYSS---------------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLS 518 (639)
Q Consensus 460 ~~~l~~~---------------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~ 518 (639)
.+++... ...+++..+..++.+++.||+||| ..+++||||||+||++++++.++++
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~ 172 (288)
T cd05050 96 NEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIA 172 (288)
T ss_pred HHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhheEecCCCceEEC
Confidence 9887531 124788899999999999999999 6689999999999999999999999
Q ss_pred cccccccccccCCC-------c------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCC
Q 041082 519 DFGMAKLLLKEDQS-------F------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLP 571 (639)
Q Consensus 519 dfgla~~~~~~~~~-------~------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~ 571 (639)
|||+++.+...... . +. ...+.++||| | + |..|.. +....+++.....
T Consensus 173 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~-----~~~~~~~~~~~~~ 247 (288)
T cd05050 173 DFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY-----GMAHEEVIYYVRD 247 (288)
T ss_pred ccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC-----CCCHHHHHHHHhc
Confidence 99998765432210 0 00 0112245665 4 2 333332 1111222211111
Q ss_pred CCcceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 572 ISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 572 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
.. .. ..+..+...+.+++.+|++.+|++||+|.|+++.|++
T Consensus 248 ~~--------~~-------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 248 GN--------VL-------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CC--------CC-------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11 00 0112234568889999999999999999999999873
No 122
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.73 E-value=4.6e-18 Score=171.87 Aligned_cols=203 Identities=28% Similarity=0.403 Sum_probs=132.6
Q ss_pred CCcCcceEEEec------CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.||++... .+..+++|.+..........+..+++..+ .+++||+++|+|.
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (280)
T cd05092 16 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLN 95 (280)
T ss_pred ccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHH
Confidence 568899988532 34678888876554444556666666533 2678999999999
Q ss_pred hccccCC--------------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 461 KCLYSSN--------------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 461 ~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++++... ..++|.++..++.+++.|++||| ..+++||||||+||++++++.++++|||+++..
T Consensus 96 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 172 (280)
T cd05092 96 RFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 172 (280)
T ss_pred HHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCEEECCCCceeEc
Confidence 8876421 34899999999999999999999 678999999999999999999999999999755
Q ss_pred cccCCCc-------------cc----cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeecccccc
Q 041082 527 LKEDQSF-------------TQ----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSM 585 (639)
Q Consensus 527 ~~~~~~~-------------~~----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~ 585 (639)
....... +. ...+.++||| +.|..+.+++. ...|.. ..+.++....+.
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~-----------slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 241 (280)
T cd05092 173 YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIW-----------SFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR 241 (280)
T ss_pred CCCceeecCCCccccccccCHHHhccCCcCchhhHH-----------HHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence 3221100 00 0011234555 33333333332 111110 000010000000
Q ss_pred ccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 586 EDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 586 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
..+.+..+...+.+++.+|++.+|++||++.||.+.|+
T Consensus 242 ---~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 242 ---ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00111223345778999999999999999999999886
No 123
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.73 E-value=7.6e-18 Score=167.89 Aligned_cols=198 Identities=22% Similarity=0.347 Sum_probs=136.1
Q ss_pred CCcCcceEEEecC--C--ceeeeEEechhhh-hhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQD--G--MKVAVKVFDLQYE-RAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~--g--~~vavK~l~~~~~-~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.... + ..+|+|.+..... ...+.+..|+..++ .+++||+++|+|.++
T Consensus 6 g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~ 85 (257)
T cd05040 6 GSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGSLLDR 85 (257)
T ss_pred cCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCcHHHH
Confidence 4678999998743 2 3689999876554 44556666666533 267899999999998
Q ss_pred cccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--c------
Q 041082 463 LYSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--F------ 533 (639)
Q Consensus 463 l~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--~------ 533 (639)
+.... ..++|.....++.+++.||+||| ..+++||||||+||+++.++.+|++|||+++.+...... .
T Consensus 86 l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 162 (257)
T cd05040 86 LRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV 162 (257)
T ss_pred HHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCC
Confidence 87643 46899999999999999999999 678999999999999999999999999999876542211 0
Q ss_pred ------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch
Q 041082 534 ------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 534 ------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
+. ...+.++||| | | |+.|.... ....+...+.. .. .. ...+
T Consensus 163 ~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~~~~---~~------~~--------~~~~ 223 (257)
T cd05040 163 PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL--SGSQILKKIDK---EG------ER--------LERP 223 (257)
T ss_pred CceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHh---cC------Cc--------CCCC
Confidence 00 0112256666 5 4 55554321 01111111110 00 00 0011
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
......+.+++.+|++.+|++||++.+|++.|.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 223456778999999999999999999999875
No 124
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.73 E-value=7.9e-18 Score=170.44 Aligned_cols=200 Identities=28% Similarity=0.444 Sum_probs=130.3
Q ss_pred CCcCcceEEEe-----cCCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARI-----QDGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l-----~~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.||++.. ..+..+++|.+.... ......+..|+..++ .++|||+++|+|.
T Consensus 16 g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 95 (283)
T cd05090 16 CAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLH 95 (283)
T ss_pred cCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHH
Confidence 56899999874 245789999886322 223345666665533 2689999999999
Q ss_pred hccccC----------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccc
Q 041082 461 KCLYSS----------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524 (639)
Q Consensus 461 ~~l~~~----------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~ 524 (639)
+++... ...+++.+...++.+++.||+||| ..+++||||||+||+++.++.+|++|||+++
T Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 172 (283)
T cd05090 96 EFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSR 172 (283)
T ss_pred HHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCCcEEeccccccc
Confidence 887421 124789999999999999999999 6679999999999999999999999999997
Q ss_pred cccccCCC--ccc---------------cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC------cceeeec
Q 041082 525 LLLKEDQS--FTQ---------------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS------VMEVVDV 580 (639)
Q Consensus 525 ~~~~~~~~--~~~---------------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~------~~~~~d~ 580 (639)
........ ... ...+.++||| +-|..+.+.+. ...|.. ..+.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~-----------slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 241 (283)
T cd05090 173 EIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIW-----------SFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK 241 (283)
T ss_pred cccCCcceecccCCCccceecChHHhccCCCCchhhhH-----------HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 65432211 000 0012245555 33333333222 111110 0011111
Q ss_pred cccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 581 NLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 581 ~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
... ...+..+...+.+++.+|++.+|++||++.+|.++|.
T Consensus 242 ~~~------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 242 RQL------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred CCc------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 000 0011223446777889999999999999999999885
No 125
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.73 E-value=7.7e-18 Score=170.71 Aligned_cols=118 Identities=25% Similarity=0.311 Sum_probs=94.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. .+|..+|+|.+..... .....+..|+.+++ .+|+||+++|+|..+
T Consensus 11 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 90 (285)
T cd05631 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFH 90 (285)
T ss_pred CCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHH
Confidence 46889999886 5689999998864432 12234455655533 268899999999887
Q ss_pred ccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+.. ....+++.++..++.+++.|++||| +.+|+||||||+||++++++.++++|||+++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 91 IYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIP 153 (285)
T ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence 754 2345899999999999999999999 6789999999999999999999999999998654
No 126
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.73 E-value=2.8e-17 Score=165.14 Aligned_cols=117 Identities=26% Similarity=0.378 Sum_probs=90.9
Q ss_pred CCcCcceEEEecC---CceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQD---GMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~---g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++...+ +..+++|.+..... .....+..|...++ .+|+||+++|+|.++
T Consensus 6 G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05087 6 GWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGY 85 (269)
T ss_pred cCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHH
Confidence 4688999997654 35688888765432 22234555555532 378999999999998
Q ss_pred cccC----CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSS----NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~----~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++.. ....++..+.+++.++|+|++||| ..+++||||||+||+++.++.++++|||+++..
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~ 150 (269)
T cd05087 86 LRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNK 150 (269)
T ss_pred HHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccc
Confidence 8642 234678888899999999999999 678999999999999999999999999998754
No 127
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.73 E-value=3.5e-18 Score=170.52 Aligned_cols=202 Identities=23% Similarity=0.271 Sum_probs=128.4
Q ss_pred CCcCcceEEEecC--------CceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQD--------GMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~~--------g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gs 458 (639)
.++|.||++.... ...+++|.++.........+..+...++ .+|+||+++|+
T Consensus 6 G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 85 (258)
T cd05078 6 GTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGS 85 (258)
T ss_pred ccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCc
Confidence 4688999987532 2347888876554444445555555532 27899999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcc--------eeeccccccccccccC
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMV--------AHLSDFGMAKLLLKED 530 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~--------~~i~dfgla~~~~~~~ 530 (639)
|..+++.....++|..+.+++.+++.|++||| ..+|+||||||+||+++.+.. ++++|||++.......
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~ 162 (258)
T cd05078 86 LDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE 162 (258)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccccCCch
Confidence 99998765556899999999999999999999 678999999999999988765 5899999886544322
Q ss_pred CC-c------cc-----cccccccccccCCCCCCCccCCCccchHHHHHhh-CCCCcceeee-ccccccccccccchHHH
Q 041082 531 QS-F------TQ-----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVNDL-LPISVMEVVD-VNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 531 ~~-~------~~-----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~~-~~~~~~~~~d-~~l~~~~~~~~~~~~~~ 596 (639)
.. . +. ...+.++|+| +-|..+.+++... .+....+... ...... ....+...
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~Diw-----------slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 228 (258)
T cd05078 163 ILLERIPWVPPECIENPQNLSLAADKW-----------SFGTTLWEIFSGGDKPLSALDSQKKLQFYED---RHQLPAPK 228 (258)
T ss_pred hccccCCccCchhccCCCCCCchhhHH-----------HHHHHHHHHHcCCCCChhhccHHHHHHHHHc---cccCCCCC
Confidence 11 0 00 0012234554 3333333333221 1111000000 000000 00001112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
...+.+++.+|++.+|++||+|.++++.|
T Consensus 229 ~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 229 WTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred cHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 24578899999999999999999999886
No 128
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.73 E-value=1.4e-17 Score=171.32 Aligned_cols=220 Identities=23% Similarity=0.293 Sum_probs=134.4
Q ss_pred CCcCcceEEEec--------CCceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCC
Q 041082 407 SGFGSIYKARIQ--------DGMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPH 456 (639)
Q Consensus 407 ~g~g~vy~~~l~--------~g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~ 456 (639)
.++|.||++... ....+|+|.+.... ......+..|+..++ .+++||+++
T Consensus 23 G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 102 (314)
T cd05099 23 GCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAK 102 (314)
T ss_pred CCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCC
Confidence 467889987632 23568888876432 222344555555432 267899999
Q ss_pred CCchhccccC---------------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccc
Q 041082 457 GSLEKCLYSS---------------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFG 521 (639)
Q Consensus 457 gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfg 521 (639)
|+|.+++... ...++|.+..+++.+++.||+||| ..+++||||||+||+++.++.+|++|||
T Consensus 103 g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg 179 (314)
T cd05099 103 GNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFG 179 (314)
T ss_pred CcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEcccc
Confidence 9999888541 135899999999999999999999 6789999999999999999999999999
Q ss_pred ccccccccCCCcc--cccc---ccccccc-cCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeecccccccccccc
Q 041082 522 MAKLLLKEDQSFT--QNTN---TCHHRIY-GTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMEDKYFT 591 (639)
Q Consensus 522 la~~~~~~~~~~~--~~~~---~~~~dvy-Gtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~~~~~ 591 (639)
+++.......... .... .....++ +.......|+|+.|..+.+++. ...|.. ..+.++. +.... ..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~--~~~ 256 (314)
T cd05099 180 LARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL-LREGH--RMD 256 (314)
T ss_pred ccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCC--CCC
Confidence 9986543211100 0000 0000010 1111122333344444433332 111111 0000000 00000 001
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHHH
Q 041082 592 TKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDLL 632 (639)
Q Consensus 592 ~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~~ 632 (639)
.+..+...+.+++.+|++.+|++||++.|+++.|.++....
T Consensus 257 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 257 KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 11233446778999999999999999999999999887543
No 129
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.73 E-value=3.2e-17 Score=169.91 Aligned_cols=145 Identities=23% Similarity=0.296 Sum_probs=108.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+|+|.+..... .....+..|++.++ .+|+||+++|+|.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 95 (331)
T cd06649 16 GNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 95 (331)
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHH
Confidence 457889998865 578899998875432 22345666766643 36899999999999886
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---------cc-
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---------FT- 534 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---------~~- 534 (639)
.. ..+++.....++.+++.|++|||+ ..+|+||||||+||+++.++.+||+|||+++........ .+
T Consensus 96 ~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE 172 (331)
T cd06649 96 EA-KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 172 (331)
T ss_pred Hc-CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHh
Confidence 43 357888899999999999999995 236999999999999999999999999999765432111 00
Q ss_pred ---ccccccccccc--c-------CCCCCCCc
Q 041082 535 ---QNTNTCHHRIY--G-------TRRNPQMN 554 (639)
Q Consensus 535 ---~~~~~~~~dvy--G-------tg~~p~~~ 554 (639)
....+.++|+| | ||+.|...
T Consensus 173 ~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 173 RLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred HhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 01123478999 7 89888753
No 130
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.73 E-value=8.2e-18 Score=167.57 Aligned_cols=195 Identities=25% Similarity=0.383 Sum_probs=132.9
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.||++....+..+++|.+..... ....|..|++.++ .+++||+++|+|.+++...
T Consensus 15 g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~ 93 (256)
T cd05112 15 GQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQ 93 (256)
T ss_pred cccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhC
Confidence 467899999887778899998764322 2345666766643 2688999999999988764
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc------------c
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------------T 534 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------------~ 534 (639)
...++|..+..++.+++.|++||| ..+++||||||+||+++.++.++++|||+++......... +
T Consensus 94 ~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aP 170 (256)
T cd05112 94 RGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSP 170 (256)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCH
Confidence 456889999999999999999999 5679999999999999999999999999987654321100 0
Q ss_pred c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
. ...+.++||| | + |+.|.... ...+.+.... .. ....++. .....+
T Consensus 171 e~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~-~~-~~~~~~~-------------~~~~~~ 230 (256)
T cd05112 171 EVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR-----SNSEVVETIN-AG-FRLYKPR-------------LASQSV 230 (256)
T ss_pred hHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC-----CHHHHHHHHh-CC-CCCCCCC-------------CCCHHH
Confidence 0 0112245666 4 3 44444321 1111111100 00 0011111 123458
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
.+++.+|++.+|++||+|.||+++|
T Consensus 231 ~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 231 YELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHHHcccChhhCCCHHHHHHhh
Confidence 8899999999999999999999887
No 131
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.73 E-value=2.3e-17 Score=168.68 Aligned_cols=200 Identities=22% Similarity=0.311 Sum_probs=132.1
Q ss_pred CCcCcceEEEec------CCceeeeEEechhh-hhhhhhHHHHHHHHH---------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQY-ERAFKSFDVACDMMK---------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~-~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gs 458 (639)
.++|.||++... .+..+|+|.+.... ......+..|+..++ .+++||+++|+
T Consensus 46 G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 125 (302)
T cd05055 46 GAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGD 125 (302)
T ss_pred cCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCc
Confidence 457889888641 24578999876432 222334555555532 26899999999
Q ss_pred chhccccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc----
Q 041082 459 LEKCLYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---- 533 (639)
Q Consensus 459 L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---- 533 (639)
|.++++.. ...++|.+...++.+++.|++||| ..+++|+||||+||+++.+..++++|||+++.+.......
T Consensus 126 L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 202 (302)
T cd05055 126 LLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGN 202 (302)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCC
Confidence 99998753 234899999999999999999999 6789999999999999999999999999998654322100
Q ss_pred ---------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccc
Q 041082 534 ---------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYF 590 (639)
Q Consensus 534 ---------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 590 (639)
+. ...+.++||| | | |+.|....... .....++.... ..
T Consensus 203 ~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~~~~~~~~~~------------~~------ 263 (302)
T cd05055 203 ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLIKEGY------------RM------ 263 (302)
T ss_pred CCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HHHHHHHHcCC------------cC------
Confidence 00 0112256776 5 4 55554321110 01111111000 00
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 591 TTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 591 ~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
..+......+.+++.+|++.+|++||++.||++.|++.
T Consensus 264 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00011123577899999999999999999999999763
No 132
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.73 E-value=7.8e-18 Score=168.22 Aligned_cols=197 Identities=26% Similarity=0.403 Sum_probs=136.0
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.||++...++..+++|.+..... ....+..++..++ .+++||+++++|.+++...
T Consensus 17 g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~ 95 (261)
T cd05034 17 GQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSG 95 (261)
T ss_pred CcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhcc
Confidence 457899999988888899998874432 2345666655533 3689999999999998763
Q ss_pred C-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC------------c
Q 041082 467 N-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------------F 533 (639)
Q Consensus 467 ~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------------~ 533 (639)
. ..++|.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||+++........ .
T Consensus 96 ~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~ 172 (261)
T cd05034 96 EGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTA 172 (261)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccC
Confidence 2 46899999999999999999999 667999999999999999999999999998866432110 0
Q ss_pred cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 534 TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 534 ~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
+. ...+.++|+| | | |+.|.... ......+.+..... . ..+......
T Consensus 173 PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~~~~~~-----~-------------~~~~~~~~~ 232 (261)
T cd05034 173 PEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM--TNREVLEQVERGYR-----M-------------PRPPNCPEE 232 (261)
T ss_pred HHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHcCCC-----C-------------CCCCCCCHH
Confidence 00 0112356676 5 4 55554321 01111111110000 0 001112345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
+.+++.+|+..+|++||++.++++.|+.
T Consensus 233 ~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 233 LYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 7889999999999999999999998874
No 133
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=3.7e-19 Score=183.54 Aligned_cols=280 Identities=24% Similarity=0.264 Sum_probs=137.4
Q ss_pred EEeCCCCCc-ccCCcCCCCCCCCCEEeccCCcCCc----cCCccccCCcccceeeccCCcCCC------CCCccccCCCC
Q 041082 57 LNISGLSLT-STIPSELGNLSSLQTLDLSFNWFSG----SIPSSIFNMSSLLSIYFNNNTLFG------EIPEELGNLAE 125 (639)
Q Consensus 57 L~L~~~~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~ 125 (639)
|+|..+.++ ...+..+..+++|+.|+++++.++. .++..+...+.|+.|+++++.+.+ .++..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 555666655 3334445566667777777777643 245555566667777777766642 23445666777
Q ss_pred CcEEecccccCccccCccccCCCC---CCEEecCCCCCCCCCCCCccEEEccCCccCccCCccccCC-CCCcEEEcccCC
Q 041082 126 LETLWLQNNFLTGTIHSSIFNLSS---LSDLDLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNA-SKLSILELQKNS 201 (639)
Q Consensus 126 L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~ 201 (639)
|+.|+|++|.+.+..+..+..+.+ |++|++++|.+++..+ ..+...+..+ ++|+.|++++|.
T Consensus 83 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~--------------~~l~~~l~~~~~~L~~L~L~~n~ 148 (319)
T cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGL--------------RLLAKGLKDLPPALEKLVLGRNR 148 (319)
T ss_pred eeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHH--------------HHHHHHHHhCCCCceEEEcCCCc
Confidence 777777777776555544444443 6666666666552100 0111122222 445555555555
Q ss_pred Cccc----CccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCC
Q 041082 202 FFDL----IPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLT 277 (639)
Q Consensus 202 l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~ 277 (639)
+++. ++..+..+++|++|++++|.+++.. .. .++..+..+++|+
T Consensus 149 l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~------------------------------~l~~~l~~~~~L~ 196 (319)
T cd00116 149 LEGASCEALAKALRANRDLKELNLANNGIGDAG--IR------------------------------ALAEGLKANCNLE 196 (319)
T ss_pred CCchHHHHHHHHHHhCCCcCEEECcCCCCchHH--HH------------------------------HHHHHHHhCCCCC
Confidence 4421 1223444555666666666554310 00 0011112223333
Q ss_pred EEECCCCCCCcc----ccccccCCcCCcEEEccCCcCCCCCchhhc-----CCCCCcEEECCCCcCcc----cCCccccC
Q 041082 278 AIYLAGNKLNGS----IPITLCKLQKLQLLSFVDNKLEGPIPYEFC-----RLASLYELDLSGNKLSG----SIPTCFGN 344 (639)
Q Consensus 278 ~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~----~~p~~~~~ 344 (639)
.|++++|.+++. ++..+..+++|+.|++++|.+++.....+. ..+.|+.|++++|.++. .+...+..
T Consensus 197 ~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~ 276 (319)
T cd00116 197 VLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAE 276 (319)
T ss_pred EEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhc
Confidence 333333333211 112223334444444444444321111111 12456666666666541 12233444
Q ss_pred CCCCCEEeCCCCcCccc----chhhhhcC-CCCcEEEcccCCC
Q 041082 345 QTSLRILSLDSNKLISI----IPSTLWNL-KDILYLNLSSNFF 382 (639)
Q Consensus 345 l~~L~~L~l~~N~l~~~----~p~~~~~l-~~L~~L~ls~N~l 382 (639)
+++|+++++++|.+... ....+... +.|+++++.+|++
T Consensus 277 ~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 277 KESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 56777777777777644 33333333 5677777777653
No 134
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.72 E-value=1.4e-17 Score=169.66 Aligned_cols=206 Identities=23% Similarity=0.320 Sum_probs=130.3
Q ss_pred CCcCcceEEEecC-----------------CceeeeEEechhhh-hhhhhHHHHHHHHH--------------------h
Q 041082 407 SGFGSIYKARIQD-----------------GMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------K 448 (639)
Q Consensus 407 ~g~g~vy~~~l~~-----------------g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~ 448 (639)
.++|.||++.... +..+++|.+..... .....+..|++.++ .
T Consensus 16 G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 95 (296)
T cd05051 16 GQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLC 95 (296)
T ss_pred CCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcE
Confidence 4577888776542 24588998765432 23455666666543 2
Q ss_pred hhhhcCCCCCchhccccCC----------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeec
Q 041082 449 LVLEYMPHGSLEKCLYSSN----------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLS 518 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~----------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~ 518 (639)
+++||+++++|.+++.... ..+++.....++.+++.||+||| ..+++||||||+||+++.++.++++
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~ 172 (296)
T cd05051 96 MIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIA 172 (296)
T ss_pred EEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhceeecCCCceEEc
Confidence 5789999999998886522 25899999999999999999999 6679999999999999999999999
Q ss_pred cccccccccccCCCc-------------cc----cccccccccccCCCCCCCccCCCccchHHHHH--hhCCCCc---ce
Q 041082 519 DFGMAKLLLKEDQSF-------------TQ----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN--DLLPISV---ME 576 (639)
Q Consensus 519 dfgla~~~~~~~~~~-------------~~----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~--~~~~~~~---~~ 576 (639)
|||+++......... +. ...+.++||| +.|..+.+++. ...|... .+
T Consensus 173 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~-----------slG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05051 173 DFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVW-----------AFGVTLWEILTLCREQPYEHLTDQQ 241 (296)
T ss_pred cccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhh-----------hhHHHHHHHHhcCCCCCCCCcChHH
Confidence 999998654322110 00 0112245555 33333333322 0111000 00
Q ss_pred eeeccccc----cccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 577 VVDVNLLS----MEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 577 ~~d~~l~~----~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
+++..... ........+..+...+.+++.+|++.+|++||+|.||++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 242 VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 00000000 000000011123356889999999999999999999999885
No 135
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.72 E-value=4.1e-17 Score=163.77 Aligned_cols=116 Identities=22% Similarity=0.350 Sum_probs=86.8
Q ss_pred CCcCcceEEEecCC---ceeeeEEechhh-hhhhhhHHHHHHHH--------------------HhhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQDG---MKVAVKVFDLQY-ERAFKSFDVACDMM--------------------KKLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~g---~~vavK~l~~~~-~~~~~~f~~e~~~~--------------------~~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++...++ ..+++|.+.... ......|..++..+ ..+|+||+++|+|.++
T Consensus 6 G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (268)
T cd05086 6 GWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSY 85 (268)
T ss_pred CcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHH
Confidence 45889999875443 245566654332 12234555554432 2478999999999998
Q ss_pred cccC---CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 463 LYSS---NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 463 l~~~---~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++.. ....++.....++.++|+||+||| ..+++||||||+||+++.++.++++|||+++.
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 86 LSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPS 148 (268)
T ss_pred HHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccc
Confidence 8752 234566777899999999999999 66799999999999999999999999999864
No 136
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.72 E-value=9.7e-18 Score=177.21 Aligned_cols=155 Identities=15% Similarity=0.177 Sum_probs=91.6
Q ss_pred cCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--ccccccc---ccc
Q 041082 469 ILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF--TQNTNTC---HHR 543 (639)
Q Consensus 469 ~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~--~~~~~~~---~~d 543 (639)
.++|.+..+|+.+++.||+||| ..+|+||||||+||+++++..+|++|||+++......... .....+. ...
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE 311 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE 311 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChH
Confidence 4688889999999999999999 6789999999999999999999999999998653221100 0000000 000
Q ss_pred cc-cCCCCCCCccCCCccchHHHHH-hhCCCCc---ceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 041082 544 IY-GTRRNPQMNFFSGEMTLKSWVN-DLLPISV---MEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINA 618 (639)
Q Consensus 544 vy-Gtg~~p~~~~~~~~~~l~~~~~-~~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m 618 (639)
+. +....+..|+|+.|..+.+.+. ...|... .+.....+... .+...+..+...+.+++..|++.+|++||+|
T Consensus 312 ~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~ 389 (401)
T cd05107 312 SIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRG--YRMAKPAHASDEIYEIMQKCWEEKFEIRPDF 389 (401)
T ss_pred HhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence 00 1111122233333433433332 1112110 00000000000 0001111233567888899999999999999
Q ss_pred HHHHHHHHHh
Q 041082 619 KESVTRLLKI 628 (639)
Q Consensus 619 ~~v~~~l~~~ 628 (639)
.||+..|+++
T Consensus 390 ~ell~~L~~~ 399 (401)
T cd05107 390 SQLVHLVGDL 399 (401)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 137
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.72 E-value=2e-17 Score=165.24 Aligned_cols=197 Identities=21% Similarity=0.368 Sum_probs=134.0
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhcccc-C
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCLYS-S 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l~~-~ 466 (639)
.++|.||++....+..+++|.+..... ....+..|+..++ .+++||+++|+|.+++.. .
T Consensus 17 g~~~~vy~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~ 95 (260)
T cd05073 17 GQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDE 95 (260)
T ss_pred ccceEEEEEEecCCccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCC
Confidence 457899999887778899998754322 2345555655533 368999999999998865 3
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-c----------
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT-Q---------- 535 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~-~---------- 535 (639)
...++|.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||+++.......... .
T Consensus 96 ~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~P 172 (260)
T cd05073 96 GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 172 (260)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCH
Confidence 345899999999999999999999 56799999999999999999999999999876543221100 0
Q ss_pred -----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 536 -----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 536 -----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
...+.++|+| | | |+.|.... ....+..+....... +........+
T Consensus 173 E~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 232 (260)
T cd05073 173 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRALERGYRM------------------PRPENCPEEL 232 (260)
T ss_pred hHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHhCCCCC------------------CCcccCCHHH
Confidence 0112245666 4 4 44444321 011111111110000 0011223457
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLLK 627 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~~ 627 (639)
.+++.+|++.+|++||++.++.+.|+.
T Consensus 233 ~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 233 YNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 788899999999999999999999874
No 138
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.72 E-value=4.2e-17 Score=163.75 Aligned_cols=199 Identities=20% Similarity=0.323 Sum_probs=130.5
Q ss_pred CCcCcceEEEecC--CceeeeEEechhhh----------hhhhhHHHHHHHHH---------------------hhhhhc
Q 041082 407 SGFGSIYKARIQD--GMKVAVKVFDLQYE----------RAFKSFDVACDMMK---------------------KLVLEY 453 (639)
Q Consensus 407 ~g~g~vy~~~l~~--g~~vavK~l~~~~~----------~~~~~f~~e~~~~~---------------------~Lv~ey 453 (639)
.++|.+|++.... +..+++|.+..... .....+..++..+. .+++||
T Consensus 11 G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 90 (269)
T cd08528 11 GAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDL 90 (269)
T ss_pred CCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEec
Confidence 4578999998765 67899998754321 11233444444322 268999
Q ss_pred CCCCCchhcccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 454 MPHGSLEKCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 454 ~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
+++++|.+++.. ....+++..+.+++.+++.|++|||+ ..+++|||||+.||+++.++.++++|||++.......
T Consensus 91 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 168 (269)
T cd08528 91 IEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES 168 (269)
T ss_pred CCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecccceeeccccc
Confidence 999999887743 33468899999999999999999994 2469999999999999999999999999998654432
Q ss_pred CCc----------cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccccccc
Q 041082 531 QSF----------TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMED 587 (639)
Q Consensus 531 ~~~----------~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 587 (639)
... +. ...+.++||| | +|+.|.... .....+..... ......
T Consensus 169 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-----~~~~~~~~~~~--------~~~~~~-- 233 (269)
T cd08528 169 KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST-----NMLSLATKIVE--------AVYEPL-- 233 (269)
T ss_pred ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-----CHHHHHHHHhh--------ccCCcC--
Confidence 100 00 0112256666 5 566554321 11111111110 000000
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 588 KYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
........+.+++.+|++.+|++||+|.||.++++
T Consensus 234 ----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 234 ----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00012235677888999999999999999999885
No 139
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.72 E-value=1.3e-17 Score=168.37 Aligned_cols=197 Identities=24% Similarity=0.330 Sum_probs=129.7
Q ss_pred CCcCcceEEEecC------CceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQD------GMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~------g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++.... +..+++|...... ......|..|...++ .+|+||+++|+|
T Consensus 17 g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L 96 (277)
T cd05036 17 GAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDL 96 (277)
T ss_pred CCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCH
Confidence 4578999998753 4678888775332 222334555555432 368999999999
Q ss_pred hhccccCC------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc---ceeeccccccccccccC
Q 041082 460 EKCLYSSN------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM---VAHLSDFGMAKLLLKED 530 (639)
Q Consensus 460 ~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~---~~~i~dfgla~~~~~~~ 530 (639)
.++++... ..++|.++.+++.+|++|++||| ..+++||||||+||+++.++ .+|++|||+++.+....
T Consensus 97 ~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~ 173 (277)
T cd05036 97 KSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRAS 173 (277)
T ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEeccCccccccCCcc
Confidence 99886522 25899999999999999999999 66799999999999998654 69999999998663221
Q ss_pred CCc-------------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeecccc
Q 041082 531 QSF-------------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLL 583 (639)
Q Consensus 531 ~~~-------------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 583 (639)
... +. ...+.++||| | | |+.|.+.. .-.+.+....... .
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~-----~~~~~~~~~~~~~---------~ 239 (277)
T cd05036 174 YYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR-----TNQEVMEFVTGGG---------R 239 (277)
T ss_pred ceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHcCC---------c
Confidence 110 00 1122256666 4 2 54444311 0111111100000 0
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
. ..+..+...+.+++.+|++.+|++||++.+|++.|+
T Consensus 240 ~------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 240 L------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred C------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 0 011223346788999999999999999999999885
No 140
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.72 E-value=2.4e-17 Score=166.52 Aligned_cols=201 Identities=23% Similarity=0.345 Sum_probs=136.5
Q ss_pred CCcCcceEEEecC-C----ceeeeEEechhhh-hhhhhHHHHHHHHH-------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD-G----MKVAVKVFDLQYE-RAFKSFDVACDMMK-------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g----~~vavK~l~~~~~-~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.+|++.... | ..+++|....... .....+..|+..++ .+|+||+++|+|.+
T Consensus 18 g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~g~L~~ 97 (279)
T cd05057 18 GAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMPLGCLLD 97 (279)
T ss_pred CCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEecCCCCcHHH
Confidence 5688999988643 3 2588887754432 22345555655533 26789999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT------- 534 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~------- 534 (639)
++......+++....+++.++++|++||| ..+++||||||+||+++.++.+|++|||+++.+........
T Consensus 98 ~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 174 (279)
T cd05057 98 YVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVP 174 (279)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCccc
Confidence 98765556899999999999999999999 67899999999999999999999999999987653221100
Q ss_pred ------c----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 535 ------Q----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 535 ------~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
. ...+.++|+| | | |+.|.... ...++........ . ...+.
T Consensus 175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~---~------------~~~~~ 234 (279)
T cd05057 175 IKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI-----PAVEIPDLLEKGE---R------------LPQPP 234 (279)
T ss_pred ccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC-----CHHHHHHHHhCCC---C------------CCCCC
Confidence 0 0112256666 4 4 55554321 1111111110000 0 00111
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRD 630 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~ 630 (639)
.+...+.+++.+|+..+|++||++.++++.+.++..
T Consensus 235 ~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 235 ICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 233457788999999999999999999999988754
No 141
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.72 E-value=1.7e-17 Score=166.34 Aligned_cols=117 Identities=32% Similarity=0.425 Sum_probs=95.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++.. .++..+++|++..........+..|+..++ .+|+||+++|+|.++++.
T Consensus 20 g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 99 (267)
T cd06646 20 GTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV 99 (267)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 45789999986 567899999987554333444555555533 268999999999998864
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
. ..+++.++..++.+++.|+.||| ..+|+|||+||.||+++.++.++++|||+++.+.
T Consensus 100 ~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 100 T-GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT 157 (267)
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence 3 35789999999999999999999 6789999999999999999999999999988654
No 142
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.72 E-value=1.7e-17 Score=165.54 Aligned_cols=197 Identities=28% Similarity=0.459 Sum_probs=137.8
Q ss_pred CCcCcceEEEecC----CceeeeEEechhhhhh-hhhHHHHHHHHH--------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD----GMKVAVKVFDLQYERA-FKSFDVACDMMK--------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~----g~~vavK~l~~~~~~~-~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++.... +..+++|.+....... ...+..++...+ .+++||+++|+|.+
T Consensus 6 g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (262)
T cd00192 6 GAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLD 85 (262)
T ss_pred CCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHH
Confidence 4578899998754 7889999987654332 345555555532 36899999999999
Q ss_pred ccccC--------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-
Q 041082 462 CLYSS--------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS- 532 (639)
Q Consensus 462 ~l~~~--------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~- 532 (639)
++... ...+++..+.+++.++++|++||| ..+++||||||+||+++.++.++++|||.++........
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 162 (262)
T cd00192 86 YLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYR 162 (262)
T ss_pred HHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccccccccc
Confidence 98764 366899999999999999999999 678999999999999999999999999999876543210
Q ss_pred ------c------cc----cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccc
Q 041082 533 ------F------TQ----NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSME 586 (639)
Q Consensus 533 ------~------~~----~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 586 (639)
. +. ...+.++||| | + |+.|..+. ....+.+.+.. ..
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~~---~~------------- 224 (262)
T cd00192 163 KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--SNEEVLEYLRK---GY------------- 224 (262)
T ss_pred cccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHc---CC-------------
Confidence 0 00 0122356777 5 4 46665432 11112222111 00
Q ss_pred cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 587 DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 587 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
....+..+...+.+++.+|+..+|++||++.|++..|+
T Consensus 225 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 --RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 00111223456778999999999999999999998873
No 143
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.72 E-value=3.9e-17 Score=168.83 Aligned_cols=194 Identities=22% Similarity=0.270 Sum_probs=127.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.- ..|..+|+|.+..... .....+..+...++ .+||||+++|+|..+
T Consensus 6 G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~ 85 (325)
T cd05594 6 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 85 (325)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 45889998875 4678999999865432 12233344444422 378999999999888
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----c---
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----T--- 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----~--- 534 (639)
+... ..+++.....++.+++.||+|||. ..+|+||||||+||+++.++.+||+|||+++......... +
T Consensus 86 l~~~-~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y 162 (325)
T cd05594 86 LSRE-RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 162 (325)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCccc
Confidence 7643 358999999999999999999993 2579999999999999999999999999987533211110 0
Q ss_pred -------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 535 -------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 535 -------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
....+.++||| | ||+.|.... ...+......... ..+ +.....
T Consensus 163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~-----~~~~~~~~i~~~~------~~~----------p~~~~~ 221 (325)
T cd05594 163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEE------IRF----------PRTLSP 221 (325)
T ss_pred CCHHHHccCCCCCccccccccceeeeeccCCCCCCCC-----CHHHHHHHHhcCC------CCC----------CCCCCH
Confidence 01122367777 5 677665421 1111111111110 000 001122
Q ss_pred HHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRI-----NAKESVTR 624 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP-----~m~~v~~~ 624 (639)
.+.++..+|++.+|++|| ++.++++.
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 456678899999999996 88888753
No 144
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.72 E-value=1.2e-17 Score=169.50 Aligned_cols=205 Identities=23% Similarity=0.319 Sum_probs=128.3
Q ss_pred CCcCcceEEEec------CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+|+|.+..... .....+..++..++ .+|+||+++|+|
T Consensus 17 G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 96 (288)
T cd05061 17 GSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 96 (288)
T ss_pred CCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCH
Confidence 467899988653 245789998754321 12223444544432 378999999999
Q ss_pred hhccccC---------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 460 EKCLYSS---------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 460 ~~~l~~~---------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
.+++... ....++....+++.+++.|++||| ..+|+||||||+||++++++.++++|||+++......
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~ 173 (288)
T cd05061 97 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 173 (288)
T ss_pred HHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECcCCccccccccc
Confidence 9988641 123567778899999999999999 7789999999999999999999999999998654322
Q ss_pred CCcc--c---------------cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCC---cceeeecccccccccc
Q 041082 531 QSFT--Q---------------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPIS---VMEVVDVNLLSMEDKY 589 (639)
Q Consensus 531 ~~~~--~---------------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~---~~~~~d~~l~~~~~~~ 589 (639)
.... . ...+.++||| +.|..+.+.+. ...|.. ..++.+....+. .
T Consensus 174 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dvw-----------slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~---~ 239 (288)
T cd05061 174 YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMW-----------SFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG---Y 239 (288)
T ss_pred cccccCCCcccccccCHHHhccCCCChHhHHH-----------HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---C
Confidence 1100 0 0011244555 22322222221 011110 001100000000 0
Q ss_pred ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 590 FTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 590 ~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+.+..+...+.+++.+|++.+|++||+|.++++.+++.
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 011122345788899999999999999999999988764
No 145
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.72 E-value=1.5e-17 Score=172.79 Aligned_cols=210 Identities=21% Similarity=0.334 Sum_probs=150.2
Q ss_pred CCcCcceEEEec--CC--ceeeeEEechhhhh-hhhhHHHHHHHHH-------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ--DG--MKVAVKVFDLQYER-AFKSFDVACDMMK-------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~--~g--~~vavK~l~~~~~~-~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~ 462 (639)
..||.|++|.|. +| ..||||.+...... ...+|..|+..|. ++|+|..+.|||.+.
T Consensus 121 GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELaplGSLldr 200 (1039)
T KOG0199|consen 121 GSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPLGSLLDR 200 (1039)
T ss_pred cceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhcccchHHHH
Confidence 358999999884 34 57899998765543 5678888887743 379999999999999
Q ss_pred ccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccccccccc
Q 041082 463 LYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH 541 (639)
Q Consensus 463 l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~~ 541 (639)
|+. ....|-......+|.+||.||.||. ....||||+-++|+||-....+||+||||.|-+..++..... ..-.|
T Consensus 201 Lrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm-~p~rk 276 (1039)
T KOG0199|consen 201 LRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM-APQRK 276 (1039)
T ss_pred HhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe-cCCCc
Confidence 987 4456778888999999999999999 778999999999999999999999999999988765422100 00000
Q ss_pred cc-cc-c-----CCC-CCCCccCCCccchHHHHHhhC-CC------CcceeeeccccccccccccchHHHHHHHHHHHhh
Q 041082 542 HR-IY-G-----TRR-NPQMNFFSGEMTLKSWVNDLL-PI------SVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAME 606 (639)
Q Consensus 542 ~d-vy-G-----tg~-~p~~~~~~~~~~l~~~~~~~~-~~------~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~ 606 (639)
.- .| . +++ +-.+|+|..|+.||+.....- |. .+.+.+|. +++.+.++.|...+++++..
T Consensus 277 vPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~------~erLpRPk~csedIY~imk~ 350 (1039)
T KOG0199|consen 277 VPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA------GERLPRPKYCSEDIYQIMKN 350 (1039)
T ss_pred CcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc------cccCCCCCCChHHHHHHHHH
Confidence 00 00 0 111 122344566777776543211 11 13344442 22345678899999999999
Q ss_pred ccCCCCCCCCCHHHHHHHHH
Q 041082 607 CTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 607 C~~~~p~~RP~m~~v~~~l~ 626 (639)
||...|++|||+..+.+.+.
T Consensus 351 cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 351 CWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred hccCCccccccHHHHHHhHH
Confidence 99999999999999986543
No 146
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.72 E-value=4e-17 Score=164.71 Aligned_cols=199 Identities=25% Similarity=0.309 Sum_probs=132.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.+|++... .+..+++|.+.... ......+..++...+ .+|+||+++|+|.+++.
T Consensus 15 g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~ 94 (277)
T cd06640 15 GSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR 94 (277)
T ss_pred CCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh
Confidence 457889999864 57899999886543 223345556655532 37899999999999886
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc---------
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ--------- 535 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~--------- 535 (639)
. ..+++.+...++.+++.|++|+| ..+++|+||+|+||+++.++.++++|||+++...........
T Consensus 95 ~--~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a 169 (277)
T cd06640 95 A--GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 169 (277)
T ss_pred c--CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccC
Confidence 4 35788889999999999999999 678999999999999999999999999999766432211000
Q ss_pred ------cccccccccccCCCCCCCccCCCccchHHHHHhhCCCCcc---eeeeccccccccccccchHHHHHHHHHHHhh
Q 041082 536 ------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVNDLLPISVM---EVVDVNLLSMEDKYFTTKKQCLSFVFNLAME 606 (639)
Q Consensus 536 ------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~ 606 (639)
...+.++|+| +.|..+.+++....|.... +.+...... ........+...+.+++.+
T Consensus 170 pE~~~~~~~~~~~Dv~-----------slG~il~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 170 PEVIQQSAYDSKADIW-----------SLGITAIELAKGEPPNSDMHPMRVLFLIPKN---NPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred HhHhccCCCccHHHHH-----------HHHHHHHHHHHCCCCCCCcChHhHhhhhhcC---CCCCCchhhhHHHHHHHHH
Confidence 0112245555 3333333333322221100 000000000 0011123456678899999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 041082 607 CTAESPKQRINAKESVTR 624 (639)
Q Consensus 607 C~~~~p~~RP~m~~v~~~ 624 (639)
|++.+|++||+|.+|++.
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 236 CLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HcccCcccCcCHHHHHhC
Confidence 999999999999999865
No 147
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.72 E-value=2.6e-17 Score=167.83 Aligned_cols=189 Identities=24% Similarity=0.335 Sum_probs=121.5
Q ss_pred ceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccCC----------cc
Q 041082 421 MKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSSN----------YI 469 (639)
Q Consensus 421 ~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~~----------~~ 469 (639)
..+|+|.+.... ......+..|+..++ .+++||+++|+|.+++.... ..
T Consensus 47 ~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 126 (296)
T cd05095 47 VLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVT 126 (296)
T ss_pred eEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccc
Confidence 468888876432 223345666666533 26899999999998876421 24
Q ss_pred CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---ccc-----------
Q 041082 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---FTQ----------- 535 (639)
Q Consensus 470 l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---~~~----------- 535 (639)
++|.+..+++.+++.|++||| ..+++||||||+||+++.++.++++|||+++.+...... ...
T Consensus 127 ~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~ 203 (296)
T cd05095 127 ISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWES 203 (296)
T ss_pred cCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHH
Confidence 788899999999999999999 667999999999999999999999999999865332210 000
Q ss_pred ---cccccccccccCCCCCCCccCCCccchHHHHH--hhCCCC---ccee-------eeccccccccccccchHHHHHHH
Q 041082 536 ---NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN--DLLPIS---VMEV-------VDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 536 ---~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~--~~~~~~---~~~~-------~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
...+.++|+| +-|..+.+.+. ...|.. ..+. +....... ....+..+...+
T Consensus 204 ~~~~~~~~~~Diw-----------SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 269 (296)
T cd05095 204 ILLGKFTTASDVW-----------AFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQV---YLPKPALCPDSL 269 (296)
T ss_pred HhcCCccchhhhh-----------HHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccc---cCCCCCCCCHHH
Confidence 0011245555 33333333322 111110 0000 00000000 001112344678
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
.+++.+|++.+|++||+|.||++.|+
T Consensus 270 ~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 270 YKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 89999999999999999999999886
No 148
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.71 E-value=1.3e-17 Score=171.11 Aligned_cols=209 Identities=22% Similarity=0.312 Sum_probs=149.9
Q ss_pred cCcceEEEecC---C--ceeeeEEechhhh-hhhhhHHHHHHHHHh-------------------hhhhcCCCCCchhcc
Q 041082 409 FGSIYKARIQD---G--MKVAVKVFDLQYE-RAFKSFDVACDMMKK-------------------LVLEYMPHGSLEKCL 463 (639)
Q Consensus 409 ~g~vy~~~l~~---g--~~vavK~l~~~~~-~~~~~f~~e~~~~~~-------------------Lv~ey~~~gsL~~~l 463 (639)
||.||+|.+.+ | ..||||.-..... .....|..|.-+|+. +|||..+-|.|..+|
T Consensus 402 FGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~~~GELr~yL 481 (974)
T KOG4257|consen 402 FGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELAPLGELREYL 481 (974)
T ss_pred ccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEecccchhHHHHH
Confidence 89999999753 2 4678887654322 234566666666553 689999999999999
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-cc-------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-TQ------- 535 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-~~------- 535 (639)
......|+......++.++..||+||| +.+.|||||-.+|||+.....+|++|||++|-+.++.+.. +.
T Consensus 482 q~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKW 558 (974)
T KOG4257|consen 482 QQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKW 558 (974)
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceee
Confidence 877778899999999999999999999 7889999999999999999999999999999887655321 00
Q ss_pred ----c----ccccccccccCCCCCCCccCCCccchHHHHHhhC-CCCcceeeeccccccccccccchHHHHHHHHHHHhh
Q 041082 536 ----N----TNTCHHRIYGTRRNPQMNFFSGEMTLKSWVNDLL-PISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAME 606 (639)
Q Consensus 536 ----~----~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~ 606 (639)
+ .-+.++||| ..|+.+|+...-.+ |....+--|.-..-+-+++...++.|...++-|+.+
T Consensus 559 maPESINfRrFTtASDVW-----------MFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmsk 627 (974)
T KOG4257|consen 559 MAPESINFRRFTTASDVW-----------MFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSK 627 (974)
T ss_pred cCccccchhcccchhhHH-----------HHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHH
Confidence 0 011145554 33444444332211 111111111111112233556678999999999999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 607 CTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 607 C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
||+.+|.+||.+.|+++.|..+.++
T Consensus 628 cWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 628 CWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred HhccCcccCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 149
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.71 E-value=2.1e-17 Score=172.93 Aligned_cols=193 Identities=21% Similarity=0.304 Sum_probs=125.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... ++..+|+|.+..... .....+..|++.++ .+|+||+++|+|....
T Consensus 85 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~- 163 (353)
T PLN00034 85 GAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH- 163 (353)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc-
Confidence 468899999864 678999999854322 22345566666543 2688999999886532
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------c
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-----------F 533 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-----------~ 533 (639)
..++.....++.++++||+||| ..+|+|||||++||++++++.+||+|||+++.+...... .
T Consensus 164 ----~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~a 236 (353)
T PLN00034 164 ----IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMS 236 (353)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccC
Confidence 2456677889999999999999 668999999999999999999999999999865432110 0
Q ss_pred ccc---------ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 534 TQN---------TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 534 ~~~---------~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
.+. ....++||| | +|+.|.... .. .+|........... .......
T Consensus 237 PE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~--~~---~~~~~~~~~~~~~~------------~~~~~~~ 299 (353)
T PLN00034 237 PERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVG--RQ---GDWASLMCAICMSQ------------PPEAPAT 299 (353)
T ss_pred ccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCC--CC---ccHHHHHHHHhccC------------CCCCCCc
Confidence 000 011256666 5 566554311 00 01111000000000 0001112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+...+.+++..|++.+|++||++.||++.
T Consensus 300 ~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 300 ASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 23457788889999999999999999864
No 150
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.71 E-value=2e-17 Score=170.73 Aligned_cols=116 Identities=24% Similarity=0.311 Sum_probs=92.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. .+|..+|+|++..... .....+..|+..++ .+|+||+++|+|..+
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 85 (323)
T cd05571 6 GTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFH 85 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 46889999875 4678999999875432 12233444555432 268999999999888
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+... ..+++.+...++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 l~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 86 LSRE-RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence 8643 45889999999999999999999 678999999999999999999999999998753
No 151
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=4.2e-17 Score=168.76 Aligned_cols=191 Identities=23% Similarity=0.261 Sum_probs=132.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh----h-hhhhhHHHHHHHHH---------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY----E-RAFKSFDVACDMMK---------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~----~-~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL 459 (639)
..||.|+.+.. ..+..+|+|.++... . ...+...+|+.+++ .+|+||+.+|+|
T Consensus 28 GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL 107 (370)
T KOG0583|consen 28 GSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDL 107 (370)
T ss_pred CCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccH
Confidence 34788998864 467999999776541 1 12334445655533 268999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC-cceeecccccccccc-ccCCCccc--
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN-MVAHLSDFGMAKLLL-KEDQSFTQ-- 535 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~-~~~~i~dfgla~~~~-~~~~~~~~-- 535 (639)
.+++.. ...+......+++.|++.|++|+| +.+|+|||||++|||+|++ +++||+|||++.... .+....+.
T Consensus 108 ~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cG 183 (370)
T KOG0583|consen 108 FDYIVN-KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCG 183 (370)
T ss_pred HHHHHH-cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCC
Confidence 999987 456777888899999999999999 7899999999999999999 999999999999873 32221110
Q ss_pred -------------c-ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccc
Q 041082 536 -------------N-TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTT 592 (639)
Q Consensus 536 -------------~-~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 592 (639)
. ....++||| | +|+.|.++ .. .....+...... .- .
T Consensus 184 sp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d--~~---~~~l~~ki~~~~---~~-------------~ 242 (370)
T KOG0583|consen 184 SPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD--SN---VPNLYRKIRKGE---FK-------------I 242 (370)
T ss_pred CcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--cc---HHHHHHHHhcCC---cc-------------C
Confidence 0 112367777 6 77777765 11 111111111110 00 0
Q ss_pred hHHH-HHHHHHHHhhccCCCCCCCCCHHHHH
Q 041082 593 KKQC-LSFVFNLAMECTAESPKQRINAKESV 622 (639)
Q Consensus 593 ~~~~-~~~~~~l~~~C~~~~p~~RP~m~~v~ 622 (639)
+.-. -..+..++.+|+..+|.+|+++.+|.
T Consensus 243 p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 243 PSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 0011 23466788899999999999999998
No 152
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.71 E-value=4.8e-17 Score=163.39 Aligned_cols=117 Identities=26% Similarity=0.362 Sum_probs=89.6
Q ss_pred CCcCcceEEEecCC---ceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQDG---MKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~g---~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.+||.||++....+ ..+++|.+..... .....|..++..++ .+|+||+++|+|.++
T Consensus 6 G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~ 85 (269)
T cd05042 6 GWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNY 85 (269)
T ss_pred cCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHH
Confidence 46889999876443 4677887654322 22334555555432 368999999999998
Q ss_pred cccCC----ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSN----YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~----~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+.... ...++.....++.+++.|++||| ..+|+||||||.||++++++.+|++|||+++..
T Consensus 86 l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 86 LRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred HHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEecccccccc
Confidence 86522 23567788899999999999999 678999999999999999999999999998753
No 153
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.71 E-value=1.1e-16 Score=162.90 Aligned_cols=196 Identities=23% Similarity=0.321 Sum_probs=132.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++... .+..+++|.+..........+..++..++ .+|+||++++++...+..
T Consensus 23 g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 102 (292)
T cd06644 23 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE 102 (292)
T ss_pred CCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh
Confidence 567899999875 47899999987655444556666665533 368999999999887765
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------cc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-----------FT 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-----------~~ 534 (639)
....+++..+..++.++++|++||| ..+++||||||+||+++.++.++|+|||++......... .+
T Consensus 103 ~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 179 (292)
T cd06644 103 LDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAP 179 (292)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCc
Confidence 4456899999999999999999999 678999999999999999999999999998754321110 00
Q ss_pred c---------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 535 Q---------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 535 ~---------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
. ...+.++|+| | ||+.|.... +-.+.+....... .+.. ..+...
T Consensus 180 E~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~-----~~~~~~~~~~~~~-----~~~~--------~~~~~~ 241 (292)
T cd06644 180 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSE-----PPTL--------SQPSKW 241 (292)
T ss_pred eeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc-----cHHHHHHHHhcCC-----CccC--------CCCccc
Confidence 0 0012246666 5 565554321 0011111111000 0000 001122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...+.+++.+|++.+|++||++.||++
T Consensus 242 ~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 242 SMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 345778899999999999999999975
No 154
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.71 E-value=2.9e-17 Score=165.24 Aligned_cols=199 Identities=29% Similarity=0.448 Sum_probs=131.6
Q ss_pred CCcCcceEEEec----CCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------------hhhhhcC
Q 041082 407 SGFGSIYKARIQ----DGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------------KLVLEYM 454 (639)
Q Consensus 407 ~g~g~vy~~~l~----~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------------~Lv~ey~ 454 (639)
.++|.||++... .+..+|+|.+.... ......+..|++.++ .++++|+
T Consensus 10 g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (273)
T cd05074 10 GEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFM 89 (273)
T ss_pred CCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecC
Confidence 467899999764 35789999886432 222334555555422 2456788
Q ss_pred CCCCchhcccc-----CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 455 PHGSLEKCLYS-----SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 455 ~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
++|+|..++.. ....+++....+++.+++.|++||| ..+|+||||||+||+++.++.+|++|||+++.....
T Consensus 90 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~ 166 (273)
T cd05074 90 KHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSG 166 (273)
T ss_pred CCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcccccccccCC
Confidence 89999877642 1235788899999999999999999 567999999999999999999999999999866432
Q ss_pred CCCc--cc---------------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccc
Q 041082 530 DQSF--TQ---------------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNL 582 (639)
Q Consensus 530 ~~~~--~~---------------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l 582 (639)
.... .. ...+.++||| | + |+.|.... +...+..+.... .. .
T Consensus 167 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~--~~~~~~~~~~~~--~~--------~ 234 (273)
T cd05074 167 DYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV--ENSEIYNYLIKG--NR--------L 234 (273)
T ss_pred cceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC--CHHHHHHHHHcC--Cc--------C
Confidence 2100 00 0112256776 5 3 44444311 111111111100 00 0
Q ss_pred cccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 583 LSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
..+..+...+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 235 --------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 235 --------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00112334688899999999999999999999999875
No 155
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.71 E-value=1.4e-17 Score=180.91 Aligned_cols=194 Identities=21% Similarity=0.217 Sum_probs=131.0
Q ss_pred CCcCcceEEEec-C-CceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-D-GMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~-g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++.-. + +..+++|............+..|+..++ .+||||+++|+|.++++
T Consensus 78 G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~ 157 (478)
T PTZ00267 78 NPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIK 157 (478)
T ss_pred CCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHH
Confidence 467889988754 3 5678888765544444445556666543 37899999999998875
Q ss_pred c---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------cc
Q 041082 465 S---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------FT 534 (639)
Q Consensus 465 ~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------~~ 534 (639)
. ....+++.....++.+++.||+|+| ..+|+||||||+||+++.++.+|++|||+++.+...... .+
T Consensus 158 ~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt 234 (478)
T PTZ00267 158 QRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGT 234 (478)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCC
Confidence 4 2345788889999999999999999 678999999999999999999999999999876432110 00
Q ss_pred ----------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 535 ----------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 535 ----------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
....+.++||| | ||+.|... ....+.+....... .++ .+..
T Consensus 235 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~-----~~~~~~~~~~~~~~----~~~-----------~~~~ 294 (478)
T PTZ00267 235 PYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG-----PSQREIMQQVLYGK----YDP-----------FPCP 294 (478)
T ss_pred ccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC-----CCHHHHHHHHHhCC----CCC-----------CCcc
Confidence 00112256777 5 67666542 11111111111100 000 0011
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
....+.+++..|++.+|++||++.+++.
T Consensus 295 ~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 295 VSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 2235677888999999999999999975
No 156
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.71 E-value=2.4e-17 Score=166.26 Aligned_cols=197 Identities=22% Similarity=0.348 Sum_probs=130.8
Q ss_pred CCcCcceEEEecC------CceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQD------GMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~------g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++.... +..+++|.+..... .....+..++..++ .+|+||+++|+|
T Consensus 17 g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (277)
T cd05032 17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDL 96 (277)
T ss_pred CCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCH
Confidence 5678899887643 36799998754321 22334555555532 368899999999
Q ss_pred hhccccC---------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 460 EKCLYSS---------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 460 ~~~l~~~---------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
.+++... ...++|.....++.+++.|+.||| ..+++||||||+||+++.++.+|++|||+++.+....
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~ 173 (277)
T cd05032 97 KSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETD 173 (277)
T ss_pred HHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECCcccchhhccCc
Confidence 9988641 124789999999999999999999 7789999999999999999999999999987654322
Q ss_pred CC--ccc---------------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeecccc
Q 041082 531 QS--FTQ---------------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLL 583 (639)
Q Consensus 531 ~~--~~~---------------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~ 583 (639)
.. ... ...+.++||| | | |+.|..+. ....+..++. +...
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~--~~~~~~~~~~-----------~~~~- 239 (277)
T cd05032 174 YYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL--SNEEVLKFVI-----------DGGH- 239 (277)
T ss_pred ccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC--CHHHHHHHHh-----------cCCC-
Confidence 10 000 1112245665 4 3 44443210 1111111111 0000
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
...+..+...+.+++.+|++.+|++|||+.++++.|+
T Consensus 240 ------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 ------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0111223456888999999999999999999999886
No 157
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.71 E-value=2.5e-18 Score=177.34 Aligned_cols=277 Identities=22% Similarity=0.240 Sum_probs=184.6
Q ss_pred EEeccCCcCC-ccCCccccCCcccceeeccCCcCCCC----CCccccCCCCCcEEecccccCcc------ccCccccCCC
Q 041082 80 TLDLSFNWFS-GSIPSSIFNMSSLLSIYFNNNTLFGE----IPEELGNLAELETLWLQNNFLTG------TIHSSIFNLS 148 (639)
Q Consensus 80 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 148 (639)
.|+|.++.++ ...+..+..+.+|+.|+++++.++.. ++..+...++|+.|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776 34455556666777777777776432 44455566677777777776652 1223344455
Q ss_pred CCCEEecCCCCCCCCCCCCccEEEccCCccCccCCccccCCC---CCcEEEcccCCCcc----cCccccCCC-CCCCEEE
Q 041082 149 SLSDLDLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNAS---KLSILELQKNSFFD----LIPNTFGNL-INLKRLN 220 (639)
Q Consensus 149 ~L~~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~---~L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~ 220 (639)
+|+.|++++| .+.+..+..+..+. +|+.|++++|.+.+ .+...+..+ ++|+.|+
T Consensus 82 ~L~~L~l~~~------------------~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~ 143 (319)
T cd00116 82 GLQELDLSDN------------------ALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLV 143 (319)
T ss_pred ceeEEEccCC------------------CCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEE
Confidence 5555555554 44433344443333 48889998888863 233345566 8999999
Q ss_pred ccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCcc----ccccccC
Q 041082 221 LYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGS----IPITLCK 296 (639)
Q Consensus 221 Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~ 296 (639)
+++|.+++... ..++..+..+++|+.|++++|.+++. ++..+..
T Consensus 144 L~~n~l~~~~~--------------------------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~ 191 (319)
T cd00116 144 LGRNRLEGASC--------------------------------EALAKALRANRDLKELNLANNGIGDAGIRALAEGLKA 191 (319)
T ss_pred cCCCcCCchHH--------------------------------HHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHh
Confidence 99999875210 01233455667889999999988742 3334556
Q ss_pred CcCCcEEEccCCcCCCC----CchhhcCCCCCcEEECCCCcCcccCCcccc-----CCCCCCEEeCCCCcCcc----cch
Q 041082 297 LQKLQLLSFVDNKLEGP----IPYEFCRLASLYELDLSGNKLSGSIPTCFG-----NQTSLRILSLDSNKLIS----IIP 363 (639)
Q Consensus 297 l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~l~~N~l~~----~~p 363 (639)
.++|+.|++++|.+.+. ++..+..+++|+.|++++|.+++.....+. ..+.|+.|++++|.++. .+.
T Consensus 192 ~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~ 271 (319)
T cd00116 192 NCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLA 271 (319)
T ss_pred CCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHH
Confidence 67999999999998744 334566788999999999998853222221 24799999999999873 234
Q ss_pred hhhhcCCCCcEEEcccCCCCCC----Cccccccc-cccccccccCCCC
Q 041082 364 STLWNLKDILYLNLSSNFFISP----LPLEIGNL-KVLVGIDLSMNNF 406 (639)
Q Consensus 364 ~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l-~~L~~l~ls~N~l 406 (639)
..+..++.|+++++++|.+... +...+... ..++.+|+.+|+|
T Consensus 272 ~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 272 EVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 4556678999999999999754 33344444 6788999988875
No 158
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.71 E-value=2.1e-17 Score=171.92 Aligned_cols=115 Identities=23% Similarity=0.378 Sum_probs=89.8
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHH-------------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMK-------------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~-------------------------~Lv~ey~~~gs 458 (639)
.++|.||++.. ..+..+|+|.+..... .....+..|+..++ .+|+||++ ++
T Consensus 11 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 89 (338)
T cd07859 11 GSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SD 89 (338)
T ss_pred cCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CC
Confidence 46788999985 4678999998864321 12233444554421 36789995 58
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
|.+++... ..+++..+..++.++++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 90 LHQVIKAN-DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred HHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 88877543 35899999999999999999999 668999999999999999999999999999854
No 159
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.71 E-value=5.6e-17 Score=164.80 Aligned_cols=208 Identities=20% Similarity=0.244 Sum_probs=127.9
Q ss_pred CCcCcceEEEec--CCceeeeEEechhhhh--hhhhHHHHHHHHH----------------------------hhhhhcC
Q 041082 407 SGFGSIYKARIQ--DGMKVAVKVFDLQYER--AFKSFDVACDMMK----------------------------KLVLEYM 454 (639)
Q Consensus 407 ~g~g~vy~~~l~--~g~~vavK~l~~~~~~--~~~~f~~e~~~~~----------------------------~Lv~ey~ 454 (639)
.++|.||++... ++..+|+|.+...... ....+..+...++ .+|+||+
T Consensus 12 G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~ 91 (290)
T cd07862 12 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 91 (290)
T ss_pred CCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccC
Confidence 468899999752 4678999988643321 1122223332211 2677888
Q ss_pred CCCCchhcccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-
Q 041082 455 PHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS- 532 (639)
Q Consensus 455 ~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~- 532 (639)
+ ++|.+++.. ....+++..+..++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++........
T Consensus 92 ~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (290)
T cd07862 92 D-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 167 (290)
T ss_pred C-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccc
Confidence 6 578777754 2345899999999999999999999 678999999999999999999999999999865432111
Q ss_pred ---------cc----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhC--C--CCcc-------eeee
Q 041082 533 ---------FT----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLL--P--ISVM-------EVVD 579 (639)
Q Consensus 533 ---------~~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~--~--~~~~-------~~~d 579 (639)
.+ ....+.++||| | ||+.|....- .......+.... + .... +.+.
T Consensus 168 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 245 (290)
T cd07862 168 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIGLPGEEDWPRDVALPRQAFH 245 (290)
T ss_pred cccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhchhhhcccchhcc
Confidence 00 01123378999 7 7877765321 111111111110 1 0000 0111
Q ss_pred ccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 580 VNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 580 ~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+.-.... .......-..+.++..+|++.+|++|||+.|+++
T Consensus 246 ~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 246 SKSAQPI---EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCCCCCH---HHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000 0000111234568999999999999999999975
No 160
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.71 E-value=8.7e-17 Score=166.63 Aligned_cols=119 Identities=28% Similarity=0.356 Sum_probs=96.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..+..+++ .+||||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (330)
T cd05601 12 GHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSL 91 (330)
T ss_pred ccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHH
Confidence 457899998754 678999999875432 12334555554432 378999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+......+++.....++.+++.||.||| ..+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 92 l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 92 LNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 8765456899999999999999999999 67899999999999999999999999999986643
No 161
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.71 E-value=7.8e-17 Score=162.86 Aligned_cols=197 Identities=24% Similarity=0.338 Sum_probs=134.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
+++|.||++... ++..+++|............|..|++.++ .+|+||+++|+|.+++..
T Consensus 16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (280)
T cd06611 16 GAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLE 95 (280)
T ss_pred CCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHH
Confidence 457889999874 57899999987655544556666666533 368999999999998876
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------cc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-----------FT 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-----------~~ 534 (639)
....+++.....++.++|.|+.||| ..+|+||||||+||+++.++.++++|||++......... .+
T Consensus 96 ~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P 172 (280)
T cd06611 96 LERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAP 172 (280)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCH
Confidence 5556899999999999999999999 667999999999999999999999999998755322110 00
Q ss_pred c---------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 535 Q---------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 535 ~---------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
. ...+.++|+| | +|+.|..+.- ....+..+. .... +.+ ..+...
T Consensus 173 E~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~-~~~~~~~~~----~~~~-----~~~--------~~~~~~ 234 (280)
T cd06611 173 EVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN-PMRVLLKIL----KSEP-----PTL--------DQPSKW 234 (280)
T ss_pred HHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC-HHHHHHHHh----cCCC-----CCc--------CCcccC
Confidence 0 0012256777 5 6666654210 000011110 0000 000 001122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
...+.+++..|++.+|++||++.+|++.
T Consensus 235 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 235 SSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 3356778889999999999999999864
No 162
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.71 E-value=3.1e-17 Score=169.62 Aligned_cols=116 Identities=26% Similarity=0.336 Sum_probs=92.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.- ..+..+|+|.+..... .....+..|+..++ .+|+||+++|+|..+
T Consensus 6 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~ 85 (328)
T cd05593 6 GTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFH 85 (328)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHH
Confidence 46789999875 4678999999864321 22234445555432 278999999999888
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+... ..+++.+...++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 86 l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~ 145 (328)
T cd05593 86 LSRE-RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (328)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence 7643 45889999999999999999999 678999999999999999999999999998754
No 163
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.70 E-value=4.6e-17 Score=167.73 Aligned_cols=189 Identities=23% Similarity=0.276 Sum_probs=126.5
Q ss_pred CCcCcceEEEe----cCCceeeeEEechhhhh--hhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARI----QDGMKVAVKVFDLQYER--AFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l----~~g~~vavK~l~~~~~~--~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.||++.. ..|..+|+|++...... ....+..|++.++ .+|+||+++|+|.
T Consensus 7 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 86 (318)
T cd05582 7 GSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 86 (318)
T ss_pred CCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHH
Confidence 45788997764 35789999998754322 1223344554432 2789999999999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-------
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------- 533 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------- 533 (639)
+++... ..+++.....++.++++||+||| ..+|+||||||+||+++.++.+|++|||+++.........
T Consensus 87 ~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~ 162 (318)
T cd05582 87 TRLSKE-VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 162 (318)
T ss_pred HHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCCh
Confidence 988643 35899999999999999999999 6789999999999999999999999999997654331100
Q ss_pred ----c----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 534 ----T----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 534 ----~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
+ ....+.++||| | ||+.|.... .-.+.......... . + +...
T Consensus 163 ~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~-----~~~~~~~~i~~~~~-~-~--------------p~~~ 221 (318)
T cd05582 163 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK-----DRKETMTMILKAKL-G-M--------------PQFL 221 (318)
T ss_pred hhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC-----CHHHHHHHHHcCCC-C-C--------------CCCC
Confidence 0 01123378888 6 777776431 11111111111100 0 0 0111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKE 620 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~ 620 (639)
...+.++..+|++.+|++||++.+
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCC
Confidence 224567888999999999999655
No 164
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.70 E-value=6e-17 Score=167.08 Aligned_cols=116 Identities=28% Similarity=0.343 Sum_probs=91.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|++..... .....+..|..++. .+||||+++|+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~ 85 (321)
T cd05591 6 GSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMF 85 (321)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHH
Confidence 468899999865 468999999865422 11223333433321 37899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 86 ~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 86 QIQRS-RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 87643 35889999999999999999999 668999999999999999999999999998753
No 165
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.70 E-value=4.2e-17 Score=165.59 Aligned_cols=117 Identities=26% Similarity=0.408 Sum_probs=92.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+|+|.+...... ....+..|+.+++ .+|+||+++ +|.+++.
T Consensus 16 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~ 94 (288)
T cd07871 16 GTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLD 94 (288)
T ss_pred CCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHH
Confidence 468899999764 5789999998754322 2234445555533 268899974 8888776
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
.....+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~ 154 (288)
T cd07871 95 NCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKS 154 (288)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence 54455788899999999999999999 6789999999999999999999999999997643
No 166
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.70 E-value=5.2e-17 Score=167.39 Aligned_cols=116 Identities=30% Similarity=0.370 Sum_probs=91.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... ++..+|+|.+..... .....+..+...+. .+||||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~ 85 (320)
T cd05590 6 GSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMF 85 (320)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHH
Confidence 457899999864 578999999864321 12223333333321 27899999999998
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 ~i~~~-~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 86 HIQKS-RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 87643 35889999999999999999999 678999999999999999999999999998753
No 167
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.70 E-value=2.8e-17 Score=169.65 Aligned_cols=116 Identities=24% Similarity=0.321 Sum_probs=92.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. .+|..+|+|.+..... .....+..|+..++ .+|+||+++|+|..+
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~ 85 (323)
T cd05595 6 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 85 (323)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHH
Confidence 46889999875 4688999999875432 12233444554432 278999999999888
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 145 (323)
T cd05595 86 LSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence 7643 35889999999999999999999 678999999999999999999999999998753
No 168
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.70 E-value=5.1e-17 Score=163.96 Aligned_cols=193 Identities=24% Similarity=0.340 Sum_probs=129.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++.. .++..+|+|..+.... .....+..+...++ .+|+||+++|+|.+++.
T Consensus 15 G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~ 94 (277)
T cd06641 15 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE 94 (277)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh
Confidence 46789999875 4678999998764432 22344555554432 37899999999998886
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------c
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-----------F 533 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-----------~ 533 (639)
. ..+++.....++.+++.|++||| ..+++|+||||+||+++.++.++++|||+++.+...... .
T Consensus 95 ~--~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~ 169 (277)
T cd06641 95 P--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 169 (277)
T ss_pred c--CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccC
Confidence 4 35889999999999999999999 678999999999999999999999999998765432110 0
Q ss_pred cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 534 TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 534 ~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
+. ...+.++|+| | ||+.|..... -..+.... +......+ .......+
T Consensus 170 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~-~~~~~~~~--------------~~~~~~~~ 229 (277)
T cd06641 170 PEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH-----PMKVLFLI-PKNNPPTL--------------EGNYSKPL 229 (277)
T ss_pred hhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc-----hHHHHHHH-hcCCCCCC--------------CcccCHHH
Confidence 00 0112256666 5 5665543210 01111110 00000000 11223456
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+++.+|++.+|++||+|.++++.
T Consensus 230 ~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 230 KEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHccCChhhCcCHHHHHhC
Confidence 778899999999999999999984
No 169
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.70 E-value=2.9e-17 Score=164.89 Aligned_cols=203 Identities=24% Similarity=0.371 Sum_probs=128.6
Q ss_pred CCcCcceEEEecC-------CceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQD-------GMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~~-------g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gs 458 (639)
.++|.||++...+ +..+++|.+.... ......+..++..++ .+|+||+++|+
T Consensus 6 g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (269)
T cd05044 6 GAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGD 85 (269)
T ss_pred ccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCc
Confidence 3578899887642 2568888764332 122345555655533 26889999999
Q ss_pred chhcccc------CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc-----ceeecccccccccc
Q 041082 459 LEKCLYS------SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-----VAHLSDFGMAKLLL 527 (639)
Q Consensus 459 L~~~l~~------~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-----~~~i~dfgla~~~~ 527 (639)
|.+++.. ....++|.++..++.+++.|++||| ..+++|+||||+||+++.+. .++++|||+++...
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~ 162 (269)
T cd05044 86 LLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIY 162 (269)
T ss_pred HHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccccccc
Confidence 9998864 1234789999999999999999999 66799999999999999877 89999999987653
Q ss_pred ccCCCccc-----------------cccccccccccCCCCCCCccCCCccchHHHHH-hhCCCCc---ceeeeccccccc
Q 041082 528 KEDQSFTQ-----------------NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVN-DLLPISV---MEVVDVNLLSME 586 (639)
Q Consensus 528 ~~~~~~~~-----------------~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~-~~~~~~~---~~~~d~~l~~~~ 586 (639)
........ ...+.++||| +.|..+.+++. ...|... .+... .+...
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~-----------slG~il~ellt~g~~p~~~~~~~~~~~-~~~~~- 229 (269)
T cd05044 163 KSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVW-----------SFGVLMWEILTLGQQPYPALNNQEVLQ-HVTAG- 229 (269)
T ss_pred cccccccCcccCCCccccCHHHHccCCcccchhHH-----------HHHHHHHHHHHcCCCCCcccCHHHHHH-HHhcC-
Confidence 32211000 0111244555 33433433332 1111110 00000 00000
Q ss_pred cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 587 DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 587 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
.....+......+.+++.+|++.+|++||+|.+|.+.|+
T Consensus 230 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 -GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 000111223456778999999999999999999999886
No 170
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.70 E-value=6.5e-17 Score=161.00 Aligned_cols=194 Identities=24% Similarity=0.346 Sum_probs=134.0
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.... +..+++|.+..... ...+..|++..+ .+++||+++++|.+++..
T Consensus 14 g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~ 91 (256)
T cd06612 14 GSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI 91 (256)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh
Confidence 4578899998765 78899998865433 456666666533 268999999999999876
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----------T 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----------~ 534 (639)
....++|.....++.+++.|++||| ..+++||||+|.||+++.++.++++|||++.......... +
T Consensus 92 ~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P 168 (256)
T cd06612 92 TNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAP 168 (256)
T ss_pred CccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCH
Confidence 5567899999999999999999999 5679999999999999999999999999988765332110 0
Q ss_pred c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
. ...+.++||| | ||+.|....... .....+ ..... +. ...+......+.
T Consensus 169 E~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--~~~~~~----~~~~~----~~--------~~~~~~~~~~~~ 230 (256)
T cd06612 169 EVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--RAIFMI----PNKPP----PT--------LSDPEKWSPEFN 230 (256)
T ss_pred HHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--hhhhhh----ccCCC----CC--------CCchhhcCHHHH
Confidence 0 0112357777 5 677665431100 000000 00000 00 001122234577
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+++.+|++.+|++||+|.||++
T Consensus 231 ~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 231 DFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHHhcChhhCcCHHHHhc
Confidence 7888999999999999999985
No 171
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.70 E-value=6.7e-17 Score=167.46 Aligned_cols=116 Identities=28% Similarity=0.298 Sum_probs=89.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhh---hhhHHHHHHHH-----------------------HhhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERA---FKSFDVACDMM-----------------------KKLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~---~~~f~~e~~~~-----------------------~~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+|+|++....... ...+..+..++ ..+|+||+++|+|
T Consensus 4 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L 83 (330)
T cd05586 4 GTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGEL 83 (330)
T ss_pred CCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChH
Confidence 468899998764 57899999986432211 11111122111 1378999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
..++.. ...+++.....++.++++||+||| ..+|+||||||+||+++.++.++|+|||+++..
T Consensus 84 ~~~l~~-~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 84 FWHLQK-EGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred HHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 888764 345888889999999999999999 678999999999999999999999999998754
No 172
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.70 E-value=1e-16 Score=163.32 Aligned_cols=194 Identities=25% Similarity=0.319 Sum_probs=131.8
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.- .++..+++|.+..........+..++...+ .+|+||+++|+|..++..
T Consensus 30 g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (296)
T cd06655 30 GASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE 109 (296)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh
Confidence 45788998874 568899999987654444445555555532 368999999999988754
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----------T 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----------~ 534 (639)
..++|.++..++.++++|++||| +.+++||||||+||+++.++.+|++|||+++......... +
T Consensus 110 --~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP 184 (296)
T cd06655 110 --TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184 (296)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCc
Confidence 35899999999999999999999 6789999999999999999999999999987654332110 0
Q ss_pred c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
. ...+.++||| | ||+.|....- .. +.+.......... + ..+......+.
T Consensus 185 E~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~----~~-~~~~~~~~~~~~~-----~--------~~~~~~~~~~~ 246 (296)
T cd06655 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN----PL-RALYLIATNGTPE-----L--------QNPEKLSPIFR 246 (296)
T ss_pred chhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HH-HHHHHHHhcCCcc-----c--------CCcccCCHHHH
Confidence 0 0112357777 5 6776654211 00 1111000000000 0 00112223466
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+++.+|+..+|++||++.+|++
T Consensus 247 ~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 247 DFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHhhcChhhCCCHHHHhh
Confidence 7889999999999999999985
No 173
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.70 E-value=7.9e-17 Score=166.98 Aligned_cols=118 Identities=25% Similarity=0.335 Sum_probs=93.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+++|.+..... .....+..|++.++ .+||||+++|+|.+++.
T Consensus 16 g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 95 (333)
T cd06650 16 GNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 95 (333)
T ss_pred CCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHH
Confidence 467899998865 578889998765422 22345666666543 27899999999999886
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
.. ..+++.....++.+++.|++|||+ ..+|+||||||+||+++.++.+|++|||+++.+.
T Consensus 96 ~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 96 KA-GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 155 (333)
T ss_pred Hc-CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence 43 357888889999999999999995 2469999999999999999999999999997653
No 174
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.70 E-value=1.2e-16 Score=162.06 Aligned_cols=212 Identities=17% Similarity=0.144 Sum_probs=131.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++... .+..+|+|++..... .....+..|+..++ .+|+||++++.+..+.
T Consensus 12 g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 91 (287)
T cd07848 12 GAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLE 91 (287)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHH
Confidence 457889999875 578899998865321 22334445555532 3789999987765443
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----------- 532 (639)
. ....+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++........
T Consensus 92 ~-~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y 167 (287)
T cd07848 92 E-MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWY 167 (287)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccccccccccc
Confidence 2 2345888889999999999999999 678999999999999999999999999999876432110
Q ss_pred -ccc----cccccccccc--c-------CCCCCCCccCCCccchHH-----------HHHhhCCCC-cceeeeccccccc
Q 041082 533 -FTQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKS-----------WVNDLLPIS-VMEVVDVNLLSME 586 (639)
Q Consensus 533 -~~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~-----------~~~~~~~~~-~~~~~d~~l~~~~ 586 (639)
.+. ...+.++|+| | +|+.|....-. ...+.. +........ .....-+......
T Consensus 168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (287)
T cd07848 168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESE-IDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ 246 (287)
T ss_pred CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcc
Confidence 000 1123378998 6 88877653210 000100 000000000 0000000000000
Q ss_pred cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 587 DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 587 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.............+.++..+|++.+|++|||+.|+++
T Consensus 247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000112345889999999999999999999875
No 175
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.69 E-value=2.4e-17 Score=167.62 Aligned_cols=192 Identities=22% Similarity=0.267 Sum_probs=130.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|++..... .....+..|+.+++ .+|+||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (291)
T cd05612 12 GTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSY 91 (291)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHH
Confidence 468899999865 578999999865432 22334555555432 268999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--------c
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF--------T 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~--------~ 534 (639)
+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++......... +
T Consensus 92 ~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aP 167 (291)
T cd05612 92 LRNS-GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAP 167 (291)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCH
Confidence 8643 35888889999999999999999 6789999999999999999999999999998764332110 0
Q ss_pred ----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 ----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
....+.++||| | ||+.|.... ...+.......... .+ +...-..+.
T Consensus 168 E~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-----~~~~~~~~i~~~~~------~~----------~~~~~~~~~ 226 (291)
T cd05612 168 EVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD-----NPFGIYEKILAGKL------EF----------PRHLDLYAK 226 (291)
T ss_pred HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCc------CC----------CccCCHHHH
Confidence 01123367888 6 777776421 11111111111100 00 001122456
Q ss_pred HHHhhccCCCCCCCCC-----HHHHHH
Q 041082 602 NLAMECTAESPKQRIN-----AKESVT 623 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~-----m~~v~~ 623 (639)
++..+|++.+|++||+ +.|+.+
T Consensus 227 ~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 227 DLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 7888999999999995 777664
No 176
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.69 E-value=5.7e-17 Score=165.35 Aligned_cols=117 Identities=30% Similarity=0.426 Sum_probs=94.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.. ..+..+++|.+..........+..++..++ .+|+||+++++|.+++..
T Consensus 30 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (297)
T cd06656 30 GASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109 (297)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh
Confidence 45788999985 568999999987654433344555555432 368999999999998854
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
..+++.++..++.+++.|+.||| ..+++||||||+||+++.++.++++|||+++....
T Consensus 110 --~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 110 --TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 34789999999999999999999 67899999999999999999999999999876543
No 177
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.69 E-value=4.5e-17 Score=169.02 Aligned_cols=201 Identities=17% Similarity=0.196 Sum_probs=132.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|++..... .....+..|...++ .+|+||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (333)
T cd05600 12 GGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTL 91 (333)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHH
Confidence 468899999875 478999999875432 12334455555432 368999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--------cc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--------FT 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--------~~ 534 (639)
+... ..+++.+...++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++........ .+
T Consensus 92 l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aP 167 (333)
T cd05600 92 LNNL-GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAP 167 (333)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccCh
Confidence 8643 35788888999999999999999 678999999999999999999999999999865431110 00
Q ss_pred c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
. ...+.++||| | ||+.|....- .......+... ..... .+.... ........+.
T Consensus 168 E~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~-~~~~~---~~~~~~-------~~~~~s~~~~ 234 (333)
T cd05600 168 EVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST--PNETWENLKYW-KETLQ---RPVYDD-------PRFNLSDEAW 234 (333)
T ss_pred hHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC--HHHHHHHHHhc-ccccc---CCCCCc-------cccccCHHHH
Confidence 0 1123367888 6 7777764311 11111111000 00000 000000 0011233466
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
++..+|+..+|++||++.++++.
T Consensus 235 ~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 235 DLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHhhChhhhcCCHHHHHhC
Confidence 78889999999999999999864
No 178
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.69 E-value=1.5e-16 Score=166.26 Aligned_cols=118 Identities=28% Similarity=0.423 Sum_probs=95.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|++..... .....+..+...+. .+|+||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (350)
T cd05573 12 GAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNL 91 (350)
T ss_pred CCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHH
Confidence 568899999865 688999999875431 22334445554432 368999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++....
T Consensus 92 l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 92 LIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 8754 46888889999999999999999 67899999999999999999999999999986654
No 179
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.69 E-value=5.9e-17 Score=161.34 Aligned_cols=196 Identities=27% Similarity=0.470 Sum_probs=133.6
Q ss_pred CCcCcceEEEecC-----CceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQD-----GMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~~-----g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.||++.... +..+++|.+...... ....+..|+..++ .+++||+++++|.
T Consensus 10 g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~ 89 (258)
T smart00219 10 GAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLL 89 (258)
T ss_pred CCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHH
Confidence 4688999988754 378999998655432 3456666665532 2688999999999
Q ss_pred hccccCCcc-CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc-----
Q 041082 461 KCLYSSNYI-LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT----- 534 (639)
Q Consensus 461 ~~l~~~~~~-l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~----- 534 (639)
+++...... +++.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||+++..........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 166 (258)
T smart00219 90 DYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKL 166 (258)
T ss_pred HHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCC
Confidence 988753333 899999999999999999999 66899999999999999999999999999986654321100
Q ss_pred -----------ccccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch
Q 041082 535 -----------QNTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 535 -----------~~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
....+.++|+| | + |+.|... .....+.+.+.. ... ...+
T Consensus 167 ~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~--~~~~~~~~~~~~---~~~---------------~~~~ 226 (258)
T smart00219 167 PIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG--MSNEEVLEYLKK---GYR---------------LPKP 226 (258)
T ss_pred cccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHhc---CCC---------------CCCC
Confidence 00112256666 4 3 4444332 011111111111 000 0011
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRL 625 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l 625 (639)
......+.+++.+|+..+|++|||+.|+++.|
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 12344677899999999999999999998764
No 180
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.69 E-value=5e-17 Score=162.51 Aligned_cols=198 Identities=21% Similarity=0.288 Sum_probs=134.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.+|++.. ..+..+++|.+.... ......+..+++.++ .+++||+++++|.+
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~ 90 (265)
T cd08217 11 GSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQ 90 (265)
T ss_pred CCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHH
Confidence 46889998875 467889999886432 122234444554422 36899999999998
Q ss_pred cccc---CCccCCHHHHHHHHHHHHHhhhhhhccC--CCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc--
Q 041082 462 CLYS---SNYILDIFQRLNIMIDVALALEYLHFGY--STPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT-- 534 (639)
Q Consensus 462 ~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~--~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~-- 534 (639)
++.. ....+++.....++.+++.|++|||..+ ..+++||||||+||+++.++.+|++|||++...........
T Consensus 91 ~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 170 (265)
T cd08217 91 LIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTY 170 (265)
T ss_pred HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCccccccc
Confidence 8864 2456899999999999999999999665 77899999999999999999999999999987654332000
Q ss_pred ---------c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccc
Q 041082 535 ---------Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTT 592 (639)
Q Consensus 535 ---------~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 592 (639)
. ...+.++|+| | +|+.|..... ...+.+.+.. .... ..
T Consensus 171 ~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~----~~~~--------------~~ 230 (265)
T cd08217 171 VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKE----GKFR--------------RI 230 (265)
T ss_pred ccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhc----CCCC--------------CC
Confidence 0 0112356777 5 6766654211 1111111110 0000 01
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 593 KKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 593 ~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+......+.+++.+|++.+|++||+|.+|+++
T Consensus 231 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 231 PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 12234567889999999999999999999863
No 181
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.69 E-value=8.9e-17 Score=165.34 Aligned_cols=115 Identities=26% Similarity=0.389 Sum_probs=90.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+..... .....+..+...+. .+|+||+++|+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~ 85 (316)
T cd05619 6 GSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMF 85 (316)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 468899999875 468899999875431 11122222332221 27899999999998
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++.. ...+++.+...++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~l~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 86 HIQS-CHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred HHHH-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence 8864 245889999999999999999999 67899999999999999999999999999875
No 182
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.69 E-value=1e-16 Score=177.68 Aligned_cols=199 Identities=25% Similarity=0.374 Sum_probs=142.3
Q ss_pred CcCcceEEEecC--------CceeeeEEechhhh-hhhhhHHHHHHHHHh---------------------hhhhcCCCC
Q 041082 408 GFGSIYKARIQD--------GMKVAVKVFDLQYE-RAFKSFDVACDMMKK---------------------LVLEYMPHG 457 (639)
Q Consensus 408 g~g~vy~~~l~~--------g~~vavK~l~~~~~-~~~~~f~~e~~~~~~---------------------Lv~ey~~~g 457 (639)
.||.|+++.+.+ ...||||.+..... ...+.+..|++.++. +|.||+..|
T Consensus 308 ~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G 387 (609)
T KOG0200|consen 308 AFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHG 387 (609)
T ss_pred cccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCC
Confidence 478888887531 35789998864433 234567777777553 578999999
Q ss_pred CchhccccCC---------------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccc
Q 041082 458 SLEKCLYSSN---------------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGM 522 (639)
Q Consensus 458 sL~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgl 522 (639)
+|.++|+... ..+.-...+.+|.|||+|++||+ +.+++|||+-++|||+.++..+||+|||+
T Consensus 388 ~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGl 464 (609)
T KOG0200|consen 388 DLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGL 464 (609)
T ss_pred cHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccc
Confidence 9999997644 34888889999999999999999 77899999999999999999999999999
Q ss_pred cccccccCCCc-cc-----------------cccccccccc--c--------CCCCCCCccCCCccchHHHHHhhCCCCc
Q 041082 523 AKLLLKEDQSF-TQ-----------------NTNTCHHRIY--G--------TRRNPQMNFFSGEMTLKSWVNDLLPISV 574 (639)
Q Consensus 523 a~~~~~~~~~~-~~-----------------~~~~~~~dvy--G--------tg~~p~~~~~~~~~~l~~~~~~~~~~~~ 574 (639)
||......... .. ..-+.++||| | -|..|+..+. ....+.++++
T Consensus 465 ar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-~~~~l~~~l~------- 536 (609)
T KOG0200|consen 465 ARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-PTEELLEFLK------- 536 (609)
T ss_pred eeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-cHHHHHHHHh-------
Confidence 99654433211 10 1112255665 4 3444443210 0111122222
Q ss_pred ceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 575 MEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 575 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+.+.+.+..|..++++++..||+.+|++||++.++++.++..
T Consensus 537 -----------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 537 -----------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred -----------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 1223455667788899999999999999999999999999884
No 183
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.69 E-value=8.5e-17 Score=164.60 Aligned_cols=116 Identities=28% Similarity=0.389 Sum_probs=90.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+|+|.+...... ....+..|+..++ .+|+||++ +++.+++.
T Consensus 16 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~ 94 (303)
T cd07869 16 GSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMD 94 (303)
T ss_pred cCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHH
Confidence 457899999865 6789999998654322 1223444554432 26899996 57777766
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.....+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 153 (303)
T cd07869 95 KHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAK 153 (303)
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence 54455888888999999999999999 678999999999999999999999999998754
No 184
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.69 E-value=1.4e-16 Score=165.16 Aligned_cols=117 Identities=26% Similarity=0.399 Sum_probs=91.3
Q ss_pred CCcCcceEEEe----cCCceeeeEEechhhh----hhhhhHHHHHHHHH---------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI----QDGMKVAVKVFDLQYE----RAFKSFDVACDMMK---------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l----~~g~~vavK~l~~~~~----~~~~~f~~e~~~~~---------------------~Lv~ey~~~g 457 (639)
.++|.||++.. ..+..+|+|++..... .....+..|..+++ .+|+||+++|
T Consensus 11 G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g 90 (332)
T cd05614 11 GAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGG 90 (332)
T ss_pred cCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCC
Confidence 46888998765 2578899999864321 11223444444422 2689999999
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+|.+++... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 91 EMFTHLYQR-DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 999888643 35888989999999999999999 6689999999999999999999999999998653
No 185
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.69 E-value=5.4e-17 Score=164.05 Aligned_cols=119 Identities=28% Similarity=0.346 Sum_probs=93.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+...... ....+..|+..++ .+||||+++|+|...
T Consensus 4 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 83 (280)
T cd05608 4 GGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYH 83 (280)
T ss_pred CCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHH
Confidence 468899998754 6789999998643321 2234445555533 268999999999877
Q ss_pred ccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+.. ....+++..+..++.+++.||+||| +.+|+||||||+||+++.++.++++|||+++.+..
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 84 IYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred HHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 643 2346899999999999999999999 67899999999999999999999999999976543
No 186
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.69 E-value=2.2e-16 Score=160.01 Aligned_cols=196 Identities=18% Similarity=0.249 Sum_probs=127.4
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHH--------------------------HhhhhhcCCCCCc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMM--------------------------KKLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~--------------------------~~Lv~ey~~~gsL 459 (639)
+++|.||++.. ..+..+++|.+..... ....+..|+... ..+||||+++|+|
T Consensus 29 g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L 107 (286)
T cd06638 29 GTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSV 107 (286)
T ss_pred CCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCH
Confidence 45788999876 4578899998754221 112333333221 1478999999999
Q ss_pred hhcccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC----
Q 041082 460 EKCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---- 532 (639)
Q Consensus 460 ~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---- 532 (639)
.++++. ....+++.....++.++++|+.||| ..+++|||||++||+++.++.++++|||+++........
T Consensus 108 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 184 (286)
T cd06638 108 TDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS 184 (286)
T ss_pred HHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccc
Confidence 987753 2345788889999999999999999 678999999999999999999999999998765432110
Q ss_pred -------ccc---------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccccccc
Q 041082 533 -------FTQ---------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMED 587 (639)
Q Consensus 533 -------~~~---------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 587 (639)
.+. ...+.++||| | ||+.|..+. .....+... .........++.
T Consensus 185 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~----~~~~~~~~~-~~~~~~~~~~~~------ 253 (286)
T cd06638 185 VGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADL----HPMRALFKI-PRNPPPTLHQPE------ 253 (286)
T ss_pred cCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCC----chhHHHhhc-cccCCCcccCCC------
Confidence 000 0012367777 5 666665421 001111000 000000111111
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 588 KYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+...+.+++.+|++.+|++||++.||++.
T Consensus 254 -------~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 254 -------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred -------CcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 112357788999999999999999999875
No 187
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.69 E-value=1.9e-16 Score=161.08 Aligned_cols=195 Identities=21% Similarity=0.280 Sum_probs=129.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHH--------------------------HhhhhhcCCCCCc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMM--------------------------KKLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~--------------------------~~Lv~ey~~~gsL 459 (639)
+++|.+|++.. .++..+++|.+...... ...+..+...+ ..+|+||+++|+|
T Consensus 33 g~~~~vy~~~~~~~~~~~aik~~~~~~~~-~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL 111 (291)
T cd06639 33 GTYGKVYKVTNKKDGSLAAVKILDPISDV-DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSV 111 (291)
T ss_pred CCCeEEEEEEECCCCCEEEEEEecccccH-HHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcH
Confidence 45788999886 46788999988643211 12222333221 1368999999999
Q ss_pred hhcccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC----
Q 041082 460 EKCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---- 532 (639)
Q Consensus 460 ~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---- 532 (639)
.++++. ....++|..+..++.+++.||+||| ..+++||||||+||+++.++.+|++|||+++........
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 188 (291)
T cd06639 112 TELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS 188 (291)
T ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCc
Confidence 988753 2346899999999999999999999 668999999999999999999999999998865432110
Q ss_pred -------cccc---------ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccccccc
Q 041082 533 -------FTQN---------TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMED 587 (639)
Q Consensus 533 -------~~~~---------~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 587 (639)
.+.. ..+.++|+| | ||+.|...... ...+..+.+. ....+.+
T Consensus 189 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~-~~~~~~~~~~----~~~~~~~-------- 255 (291)
T cd06639 189 VGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP-VKTLFKIPRN----PPPTLLH-------- 255 (291)
T ss_pred cCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH-HHHHHHHhcC----CCCCCCc--------
Confidence 0100 013467777 5 67776643210 1111111110 0001111
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 588 KYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+++....+.+++.+|++.+|++||+|.|+++
T Consensus 256 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 256 -----PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -----ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1122345788999999999999999999986
No 188
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.69 E-value=9.2e-17 Score=159.92 Aligned_cols=195 Identities=20% Similarity=0.264 Sum_probs=129.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.+|++... .+..+++|.++... ......+..|...++ .+++||+++|++.+++.
T Consensus 11 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 90 (255)
T cd08219 11 GSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIK 90 (255)
T ss_pred cCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHH
Confidence 457888888754 57889999876432 222344445544432 36899999999988875
Q ss_pred c-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc----------
Q 041082 465 S-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---------- 533 (639)
Q Consensus 465 ~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---------- 533 (639)
. ....++......++.+++.|+.||| ..+|+|+||||+||+++.++.++++|||+++.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 167 (255)
T cd08219 91 LQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYV 167 (255)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCcccc
Confidence 4 2345788889999999999999999 6789999999999999999999999999997664322110
Q ss_pred -cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 534 -TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 534 -~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
+. ...+.++|+| | +|+.|.... +............ ...+ +......
T Consensus 168 aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~~~~~~~~-~~~~--------------~~~~~~~ 227 (255)
T cd08219 168 PPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLILKVCQGS-YKPL--------------PSHYSYE 227 (255)
T ss_pred CHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHHHHHhcCC-CCCC--------------CcccCHH
Confidence 00 1122367777 5 666665421 1111111110000 0000 1112234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+.+++.+|++.+|++||++.+++.+
T Consensus 228 ~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 228 LRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHHhCCcccCCCHHHHhhc
Confidence 6678889999999999999999865
No 189
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.69 E-value=1.8e-16 Score=160.13 Aligned_cols=196 Identities=22% Similarity=0.269 Sum_probs=129.7
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++.. ..+..+|+|.+.... ......+..|+..++ .+|+||+++|++..+.
T Consensus 12 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~- 90 (279)
T cd06619 12 GNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR- 90 (279)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh-
Confidence 45788999975 567899999886432 222345666666533 2689999999886542
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---------ccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---------FTQ 535 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---------~~~ 535 (639)
.+++.....++.+++.|++||| ..+|+|+||||+||+++.++.++++|||++......... .+.
T Consensus 91 ----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE 163 (279)
T cd06619 91 ----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPE 163 (279)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCce
Confidence 3678888899999999999999 678999999999999999999999999999765432111 000
Q ss_pred ----cccccccccc--c-------CCCCCCCccCCCccc--hHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 536 ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMT--LKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 536 ----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~--l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
...+.++||| | ||+.|.......... ..++........ .+.+.. ......+
T Consensus 164 ~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~ 229 (279)
T cd06619 164 RISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVLPV---------GQFSEKF 229 (279)
T ss_pred eecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCCCC---------CcCCHHH
Confidence 1123478888 6 788776543221110 011111111000 011100 0112346
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+++.+|++.+|++||++.||+..
T Consensus 230 ~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 230 VHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHhhCChhhCCCHHHHhcC
Confidence 788889999999999999999864
No 190
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.69 E-value=1.4e-16 Score=161.49 Aligned_cols=118 Identities=25% Similarity=0.314 Sum_probs=93.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhh---hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYER---AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~---~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. .++..+|+|.+...... ....+..|+..++ .+|+||+++|+|..+
T Consensus 11 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (285)
T cd05605 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHH
Confidence 46789999885 46789999998643321 1223444555432 378999999999988
Q ss_pred cccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+... ...+++.....++.+++.|++||| ..+++||||||+||++++++.++++|||+++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 91 IYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred HHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 7642 345899999999999999999999 6689999999999999999999999999998654
No 191
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.69 E-value=2.5e-16 Score=160.66 Aligned_cols=212 Identities=23% Similarity=0.290 Sum_probs=133.1
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-----hhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-----AFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-----~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.+|++... ++..+++|.+...... ....+..|++.++ .+|+||+ +|+|.
T Consensus 11 g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~ 89 (298)
T cd07841 11 GTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLE 89 (298)
T ss_pred ccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHH
Confidence 457889999864 5789999998654322 1223333443322 3789999 89999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-------
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------- 533 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------- 533 (639)
+++......++|..+..++.++++||+||| ..+++||||||+||+++.++.++|+|||+++.........
T Consensus 90 ~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 166 (298)
T cd07841 90 KVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTR 166 (298)
T ss_pred HHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccce
Confidence 998764446899999999999999999999 6679999999999999999999999999998765321110
Q ss_pred ----cc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhh-CCCC--------cceeeeccccccc
Q 041082 534 ----TQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDL-LPIS--------VMEVVDVNLLSME 586 (639)
Q Consensus 534 ----~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~-~~~~--------~~~~~d~~l~~~~ 586 (639)
+. ...+.++|+| | +|..|....- +...+....+.. .+.. .............
T Consensus 167 ~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (298)
T cd07841 167 WYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPT 245 (298)
T ss_pred eeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-cHHHHHHHHHHcCCCchhhhhhcccccccccccccCCc
Confidence 00 0113368888 6 6755443211 100011110000 0000 0000000000000
Q ss_pred cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 587 DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 587 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
. ...........+.+++.+|++.+|++||++.||++.
T Consensus 246 ~-~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 246 P-LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred c-hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0 000012234567889999999999999999999873
No 192
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.69 E-value=1.4e-16 Score=164.19 Aligned_cols=115 Identities=29% Similarity=0.357 Sum_probs=90.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+..... .....+..+..++. .+|+||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (318)
T cd05570 6 GSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMF 85 (318)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHH
Confidence 468899999875 468899999875431 11222333333321 26899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
.+... ..+++.+...++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++.
T Consensus 86 ~~~~~-~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 86 HIQRS-GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKE 145 (318)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCee
Confidence 87643 35899999999999999999999 67899999999999999999999999999875
No 193
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.68 E-value=1.1e-16 Score=165.41 Aligned_cols=115 Identities=26% Similarity=0.356 Sum_probs=91.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... ++..+|+|++..... .....+..|..++. .+|+||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (327)
T cd05617 6 GSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMF 85 (327)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 457899998864 568899999875432 22233444444321 27899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++... ..+++..+..++.++++|++||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 86 HMQRQ-RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEecccccee
Confidence 77542 35899999999999999999999 67899999999999999999999999999875
No 194
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.68 E-value=1.2e-16 Score=165.43 Aligned_cols=116 Identities=27% Similarity=0.325 Sum_probs=91.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHH---------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMM---------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+..... .....+..|...+ ..+||||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~ 85 (329)
T cd05618 6 GSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMF 85 (329)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHH
Confidence 468899999864 568899999875421 1222333444332 137899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 ~~~~~-~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 86 HMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 77543 35889999999999999999999 678999999999999999999999999998753
No 195
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.68 E-value=6.4e-17 Score=163.23 Aligned_cols=201 Identities=19% Similarity=0.249 Sum_probs=131.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .|..+|+|.+...... ....+..|.++++ .+|+||+++|+|.++
T Consensus 4 G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 83 (277)
T cd05607 4 GGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYH 83 (277)
T ss_pred CCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHH
Confidence 468899998764 5899999998643321 1223333444432 378999999999887
Q ss_pred ccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--------
Q 041082 463 LYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------- 533 (639)
Q Consensus 463 l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------- 533 (639)
+.. ....++|..+..++.+++.|++||| ..+|+||||||+||+++.++.++|+|||++..........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y 160 (277)
T cd05607 84 IYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGY 160 (277)
T ss_pred HHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCc
Confidence 754 3345899999999999999999999 6789999999999999999999999999987654321100
Q ss_pred --c----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 534 --T----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 534 --~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
+ ....+.++||| | +|+.|....- ....-.++........ +... ......
T Consensus 161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~-~~~~~~~~~~~~~~~~--------~~~~-------~~~~~~ 224 (277)
T cd05607 161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK-EKVAKEELKRRTLEDE--------VKFE-------HQNFTE 224 (277)
T ss_pred cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc-chhhHHHHHHHhhccc--------cccc-------cccCCH
Confidence 0 01122366777 5 6776654211 1111111111111110 0000 011123
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
.+.+++..|++.+|++||+++|+++.+.
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 4678889999999999999988775443
No 196
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.68 E-value=7.1e-17 Score=162.37 Aligned_cols=194 Identities=22% Similarity=0.303 Sum_probs=127.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHH---------------------------HhhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMM---------------------------KKLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~---------------------------~~Lv~ey~~~gs 458 (639)
.++|.||++... .+..+|+|.+...... ...+..++..+ ..+++||+++|+
T Consensus 17 g~~g~vy~~~~~~~~~~~aik~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~ 95 (272)
T cd06637 17 GTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 95 (272)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEEcCCcc-HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCc
Confidence 457899999864 5788999998654322 22344443331 136899999999
Q ss_pred chhccccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----
Q 041082 459 LEKCLYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----- 532 (639)
Q Consensus 459 L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----- 532 (639)
|.+++... ...++|.....++.+++.|++||| ..+|+|||||++||+++.++.++++|||+++........
T Consensus 96 L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 172 (272)
T cd06637 96 VTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI 172 (272)
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCccc
Confidence 99988753 345899999999999999999999 567999999999999999999999999999765322110
Q ss_pred ------ccc---------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccc
Q 041082 533 ------FTQ---------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDK 588 (639)
Q Consensus 533 ------~~~---------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 588 (639)
.+. ...+.++||| | +|+.|..+.. ....+... ... ..+.+.
T Consensus 173 g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~----~~~~~~~~--~~~----~~~~~~----- 237 (272)
T cd06637 173 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH----PMRALFLI--PRN----PAPRLK----- 237 (272)
T ss_pred ccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC----HHHHHHHH--hcC----CCCCCC-----
Confidence 000 0112256666 4 5665553211 01111000 000 000000
Q ss_pred cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 589 ~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...+...+.+++.+|+..+|.+||++.||++
T Consensus 238 ----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 238 ----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0122345678889999999999999999875
No 197
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.68 E-value=1.3e-16 Score=158.96 Aligned_cols=194 Identities=26% Similarity=0.328 Sum_probs=131.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-----hhhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-----RAFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-----~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.+|++... ++..+++|.+..... ...+.+..++++++ .+++||+++++|.
T Consensus 11 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (258)
T cd06632 11 GSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLA 90 (258)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHH
Confidence 467899999876 788999998765331 23345566665532 2689999999999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--------
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------- 532 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------- 532 (639)
+++... ..+++..+..++.+++.|++||| ..+++|+|||++||+++.++.+||+|||+++........
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~ 166 (258)
T cd06632 91 KLLKKY-GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPY 166 (258)
T ss_pred HHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcc
Confidence 988643 35889999999999999999999 668999999999999999999999999998765432200
Q ss_pred --ccc----cc-cccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 533 --FTQ----NT-NTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 533 --~~~----~~-~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
.+. .. .+.++|+| | +|+.|..+.. ....+..+.. ......+ +...
T Consensus 167 y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~----~~~~~~~--------------~~~~ 227 (258)
T cd06632 167 WMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-GVAAVFKIGR----SKELPPI--------------PDHL 227 (258)
T ss_pred eeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-HHHHHHHHHh----cccCCCc--------------CCCc
Confidence 000 01 23367777 5 6777754321 0000111110 0000000 0111
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...+.++..+|++.+|++||+|.+++.
T Consensus 228 ~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 228 SDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 234566888999999999999999975
No 198
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.68 E-value=5e-17 Score=167.22 Aligned_cols=116 Identities=28% Similarity=0.344 Sum_probs=89.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHH---------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMM---------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+..... .....+..+.... ..+|+||+++|+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~ 85 (316)
T cd05592 6 GSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMF 85 (316)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHH
Confidence 468899999875 467899999865321 1111222222221 127899999999998
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++... ..++..+...++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 86 ~~~~~-~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 86 HIQSS-GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 88643 35788888999999999999999 678999999999999999999999999999754
No 199
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.68 E-value=9.7e-17 Score=147.91 Aligned_cols=204 Identities=21% Similarity=0.241 Sum_probs=138.9
Q ss_pred CCcCcceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------------~Lv~ey~~~gsL~ 460 (639)
.||.-||.+. +..+..+|+|++-.+..+.......|++..+ ++++.|...|+|.
T Consensus 32 GGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~ 111 (302)
T KOG2345|consen 32 GGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLL 111 (302)
T ss_pred CCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHH
Confidence 3555566554 4567889999987776555555555555522 3667888899998
Q ss_pred hcccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc---cCCC--
Q 041082 461 KCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK---EDQS-- 532 (639)
Q Consensus 461 ~~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~---~~~~-- 532 (639)
+.+.. ++..++..+.+.|+.||.+||++||.. .|+..||||||.|||+.+++.+++.|||=+....- +...
T Consensus 112 d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~ 190 (302)
T KOG2345|consen 112 DEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQAL 190 (302)
T ss_pred HHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHH
Confidence 87754 445689999999999999999999954 67899999999999999999999999997654421 1100
Q ss_pred ---------c-------------cccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecc
Q 041082 533 ---------F-------------TQNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVN 581 (639)
Q Consensus 533 ---------~-------------~~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 581 (639)
. ...+-+.+.||| | -|.+|++-.++.|.++.- -+..+.
T Consensus 191 ~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL-----------Av~n~q 259 (302)
T KOG2345|consen 191 RLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL-----------AVQNAQ 259 (302)
T ss_pred HHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE-----------eeeccc
Confidence 0 001112277888 6 466777665555544422 122222
Q ss_pred ccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 582 LLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 582 l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
+.-+.. ......+.++.-.|++.+|.+||+..+++..+...
T Consensus 260 ~s~P~~------~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 260 ISIPNS------SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred cccCCC------CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 211100 01233566677799999999999999999988754
No 200
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=9.7e-17 Score=159.47 Aligned_cols=193 Identities=28% Similarity=0.386 Sum_probs=130.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhh-hhhHHHHHHHH--------------------HhhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERA-FKSFDVACDMM--------------------KKLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~-~~~f~~e~~~~--------------------~~Lv~ey~~~gsL~~~l~ 464 (639)
+.||.||+|.. ..++.||+|++++..... ..+...++... -.++||||.+|++.+.+.
T Consensus 24 GsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~ 103 (467)
T KOG0201|consen 24 GSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLK 103 (467)
T ss_pred cccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhc
Confidence 45899999985 457899999999876432 22333333221 126899999999999887
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcccccc------
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTN------ 538 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~------ 538 (639)
... .++.....-|...+..|+.|+| ....+|||||+.||++..++.+|++|||.+.++..........++
T Consensus 104 ~~~-~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMA 179 (467)
T KOG0201|consen 104 SGN-ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMA 179 (467)
T ss_pred cCC-CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccc
Confidence 532 3355555556778999999999 678999999999999999999999999999888754432111111
Q ss_pred ---------ccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 539 ---------TCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 539 ---------~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
..|+|+| | +|..|..+.+.-.+ .-.+|.+ .-|.+.+ .+-..+
T Consensus 180 PEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv------lflIpk~----~PP~L~~----------~~S~~~ 239 (467)
T KOG0201|consen 180 PEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV------LFLIPKS----APPRLDG----------DFSPPF 239 (467)
T ss_pred hhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE------EEeccCC----CCCcccc----------ccCHHH
Confidence 1278888 6 77777665432100 0001111 1122211 233346
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.+.+-.|+..+|+.||++.+.++
T Consensus 240 kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 240 KEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred HHHHHHHhhcCcccCcCHHHHhh
Confidence 67778999999999999999885
No 201
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.68 E-value=2.4e-16 Score=157.75 Aligned_cols=200 Identities=24% Similarity=0.269 Sum_probs=135.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.+|++... .+..+++|.+..... .....+..+++.++ .+++||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 91 (265)
T cd06605 12 GNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILK 91 (265)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHH
Confidence 457889998875 578899998865432 23344555555432 26789999999999887
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCC-CCeEeecCCCCceeecCCcceeeccccccccccccCCC---------cc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYS-TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---------FT 534 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~-~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---------~~ 534 (639)
.....++......++.+++.|++|+| . .+++|||||+.||+++.++.++++|||.+......... .+
T Consensus 92 ~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~P 168 (265)
T cd06605 92 EVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAP 168 (265)
T ss_pred HccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCH
Confidence 54456888888999999999999999 5 78999999999999999999999999998765321110 00
Q ss_pred ----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 ----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
....+.++||| | +|+.|............+.+........ +.+. .......+.
T Consensus 169 E~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---------~~~~~~~~~ 234 (265)
T cd06605 169 ERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP-----PRLP---------SGKFSPDFQ 234 (265)
T ss_pred HHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-----CCCC---------hhhcCHHHH
Confidence 01223367888 6 7777765332111223333322221110 0000 001233467
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+++.+|+..+|++||++.+++.
T Consensus 235 ~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHcCCCchhCcCHHHHhh
Confidence 8888999999999999999975
No 202
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.68 E-value=1.3e-16 Score=159.01 Aligned_cols=195 Identities=21% Similarity=0.342 Sum_probs=130.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.+|.+... ++..+++|.+..... .....+..++...+ .++|||+++++|.++
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 90 (257)
T cd08223 11 GSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHK 90 (257)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHH
Confidence 457889988754 468899999865332 22334444544421 368999999999998
Q ss_pred cccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--------
Q 041082 463 LYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------- 533 (639)
Q Consensus 463 l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------- 533 (639)
+... ...+++.++.+++.+++.|++|+| ..+++||||||+||+++.++.++++|||+++.........
T Consensus 91 l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~ 167 (257)
T cd08223 91 LKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPY 167 (257)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcC
Confidence 8752 345899999999999999999999 6789999999999999999999999999998664321100
Q ss_pred ---cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHH
Q 041082 534 ---TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCL 597 (639)
Q Consensus 534 ---~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 597 (639)
+. ...+.++|+| | ||+.|.+. .+...++........ +. .+....
T Consensus 168 y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~-----~~~~~~~~~~~~~~~-----~~----------~~~~~~ 227 (257)
T cd08223 168 YMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA-----KDMNSLVYRIIEGKL-----PP----------MPKDYS 227 (257)
T ss_pred ccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC-----CCHHHHHHHHHhcCC-----CC----------CccccC
Confidence 00 0112256777 5 66666532 112222211111100 00 011222
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 598 SFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 598 ~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
..+.+++.+|++.+|++||+|.++++.
T Consensus 228 ~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 228 PELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 357788999999999999999999753
No 203
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.68 E-value=2.1e-16 Score=160.03 Aligned_cols=205 Identities=20% Similarity=0.224 Sum_probs=138.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... ++..+++|.+.... ......+..|++..+ .+|+||+++|+|.+++.
T Consensus 16 g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 95 (284)
T cd06620 16 GNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK 95 (284)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHH
Confidence 457899998864 57889999875432 223345666666543 37899999999998876
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---------ccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---------FTQ 535 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---------~~~ 535 (639)
.. ..++|.....++.++++|+.|||+ ..+++||||||+||++++++.++++|||+++........ .+.
T Consensus 96 ~~-~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE 172 (284)
T cd06620 96 KG-GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPE 172 (284)
T ss_pred hc-cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHH
Confidence 43 358899999999999999999995 246999999999999999999999999998754321110 000
Q ss_pred ----cccccccccc--c-------CCCCCCCccCCC------ccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 536 ----NTNTCHHRIY--G-------TRRNPQMNFFSG------EMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 536 ----~~~~~~~dvy--G-------tg~~p~~~~~~~------~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
...+.++|+| | ||+.|.+..... ...+.+++.....+. .+.+. ..+.
T Consensus 173 ~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---------~~~~ 238 (284)
T cd06620 173 RIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-----PPRLP---------SSDF 238 (284)
T ss_pred HHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----CCCCC---------chhc
Confidence 1123378888 6 787776543211 111222222222111 00000 0123
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
...+.+++.+|++.+|++||+|.||+++..-+
T Consensus 239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 239 PEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 34577888999999999999999999875433
No 204
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.68 E-value=3.5e-16 Score=158.58 Aligned_cols=194 Identities=23% Similarity=0.262 Sum_probs=132.7
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.. .++..+++|+++.........+..++..++ .+++||+++++|.+++..
T Consensus 30 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 109 (285)
T cd06648 30 GSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH 109 (285)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh
Confidence 45788999875 467899999887654444445555555432 267899999999998865
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----------T 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----------~ 534 (639)
..+++.....++.+++.|++||| ..+++||||||+||+++.++.++++|||++.......... +
T Consensus 110 --~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aP 184 (285)
T cd06648 110 --TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP 184 (285)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCH
Confidence 45889999999999999999999 6789999999999999999999999999887554321100 0
Q ss_pred ----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 ----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
....+.++||| | +|+.|... . .-..++....... .+.+. ........+.
T Consensus 185 E~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~----~-~~~~~~~~~~~~~-----~~~~~--------~~~~~~~~l~ 246 (285)
T cd06648 185 EVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFN----E-PPLQAMKRIRDNL-----PPKLK--------NLHKVSPRLR 246 (285)
T ss_pred HHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcC----C-CHHHHHHHHHhcC-----CCCCc--------ccccCCHHHH
Confidence 01123367777 5 67766532 1 1112221111110 00000 0111234678
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+++.+|++.+|++||++.++++
T Consensus 247 ~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 247 SFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHcccChhhCcCHHHHcc
Confidence 8999999999999999999985
No 205
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.68 E-value=3.2e-16 Score=157.63 Aligned_cols=199 Identities=23% Similarity=0.333 Sum_probs=130.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhh----------hhhhHHHHHHHHH--------------------hhhhhcCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYER----------AFKSFDVACDMMK--------------------KLVLEYMP 455 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~----------~~~~f~~e~~~~~--------------------~Lv~ey~~ 455 (639)
.++|.||++.. .+|..+|+|.+...... ..+.+..|+..++ .+|+||++
T Consensus 12 g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 91 (272)
T cd06629 12 GTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVP 91 (272)
T ss_pred cCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCC
Confidence 46789999875 46789999987542211 1223445554432 36899999
Q ss_pred CCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---
Q 041082 456 HGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--- 532 (639)
Q Consensus 456 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--- 532 (639)
+|+|.+++... ..+++..+..++.+++.|+.||| ..+++|||||+.||+++.++.++++|||+++........
T Consensus 92 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~ 167 (272)
T cd06629 92 GGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQN 167 (272)
T ss_pred CCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccccccccccccccc
Confidence 99999988754 45889999999999999999999 568999999999999999999999999998754321100
Q ss_pred ----------ccc------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccccccc
Q 041082 533 ----------FTQ------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMED 587 (639)
Q Consensus 533 ----------~~~------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~ 587 (639)
.+. ...+.++|+| | +|+.|..+ ......+... ........++...
T Consensus 168 ~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~----~~~~~~~~~~-~~~~~~~~~~~~~----- 237 (272)
T cd06629 168 MSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD----EEAIAAMFKL-GNKRSAPPIPPDV----- 237 (272)
T ss_pred ccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC----cchHHHHHHh-hccccCCcCCccc-----
Confidence 000 0112356777 5 66666532 1111111110 0000001111111
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 588 KYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
..+....+.+++..|+..+|++||+|.+|++.
T Consensus 238 -----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 238 -----SMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -----cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11223467778889999999999999999863
No 206
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.68 E-value=3.2e-16 Score=159.01 Aligned_cols=202 Identities=22% Similarity=0.269 Sum_probs=135.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH----------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK----------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.+|++... .+..+++|.+..... .....+..|++.++ .+||||+++++|.++
T Consensus 12 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (287)
T cd06621 12 GAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSI 91 (287)
T ss_pred CCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHH
Confidence 456789998874 578899998864432 22344555665532 368999999999887
Q ss_pred ccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------
Q 041082 463 LYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------- 532 (639)
Q Consensus 463 l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------- 532 (639)
+.. ....+++.....++.++++||+||| ..+++|+||++.||+++.++.++++|||++.........
T Consensus 92 l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 168 (287)
T cd06621 92 YKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSF 168 (287)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCcc
Confidence 653 2345788889999999999999999 678999999999999999999999999998754322110
Q ss_pred --ccc----cccccccccc--c-------CCCCCCCccCC---CccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 533 --FTQ----NTNTCHHRIY--G-------TRRNPQMNFFS---GEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 533 --~~~----~~~~~~~dvy--G-------tg~~p~~~~~~---~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
.+. ...+.++||| | ||+.|...... ....+..|+.........+..+.. .
T Consensus 169 y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 236 (287)
T cd06621 169 YMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG------------I 236 (287)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCC------------C
Confidence 010 1223478998 6 78888764311 112233333221111111010000 0
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.....+.+++..|++.+|++||||.||++
T Consensus 237 ~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred chHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 12345678999999999999999999997
No 207
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.68 E-value=1.8e-16 Score=162.10 Aligned_cols=211 Identities=19% Similarity=0.222 Sum_probs=132.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+|+|.+...... ....+..|+..++ .+|+||++ ++|...+.
T Consensus 17 g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~ 95 (301)
T cd07873 17 GTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLD 95 (301)
T ss_pred CcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHH
Confidence 467899999764 5788999988654322 1223444555432 26899997 58888876
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------c
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-----------F 533 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-----------~ 533 (639)
.....+++.....++.++++||+||| ..+|+||||||+||+++.++.++++|||+++........ .
T Consensus 96 ~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~ 172 (301)
T cd07873 96 DCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRP 172 (301)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccC
Confidence 55556889999999999999999999 778999999999999999999999999998764322110 0
Q ss_pred cc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC----cceeeecccccc---ccccccc
Q 041082 534 TQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS----VMEVVDVNLLSM---EDKYFTT 592 (639)
Q Consensus 534 ~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~~d~~l~~~---~~~~~~~ 592 (639)
+. ...+.++||| | ||+.|.... ........+....... .....+..-... .......
T Consensus 173 PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (301)
T cd07873 173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGS--TVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADC 250 (301)
T ss_pred cHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHcCCCChhhchhhhccccccccccCcccccc
Confidence 00 0122368999 7 888776532 1111111111111110 000100000000 0000000
Q ss_pred ----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 593 ----KKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 593 ----~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.......+.+++.+|++.+|++|||+.||++
T Consensus 251 ~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 251 LHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0112234678899999999999999999986
No 208
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.68 E-value=1.1e-16 Score=162.83 Aligned_cols=195 Identities=23% Similarity=0.286 Sum_probs=129.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++.. ..+..+++|.+..........+..|+..++ .+|+||+++++|.+++..
T Consensus 33 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 112 (292)
T cd06658 33 GSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH 112 (292)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc
Confidence 46788998875 457899999987654444444555554422 368999999999988754
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----------T 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----------~ 534 (639)
..+++.....++.+++.|++||| ..+|+||||||+||+++.++.++++|||++.......... +
T Consensus 113 --~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP 187 (292)
T cd06658 113 --TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAP 187 (292)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCH
Confidence 34789999999999999999999 6689999999999999999999999999987543221100 0
Q ss_pred ----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 ----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
....+.++||| | +|+.|.... ... +-+.. . ...+.+.+.. .......+.
T Consensus 188 E~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~----~~~-~~~~~-~----~~~~~~~~~~--------~~~~~~~~~ 249 (292)
T cd06658 188 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE----PPL-QAMRR-I----RDNLPPRVKD--------SHKVSSVLR 249 (292)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC----CHH-HHHHH-H----HhcCCCcccc--------ccccCHHHH
Confidence 01122367777 5 666665321 000 00000 0 0011111110 001122455
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
++...|+..+|++|||+.||++.
T Consensus 250 ~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 250 GFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHHHccCChhHCcCHHHHhhC
Confidence 67789999999999999999964
No 209
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.67 E-value=1.1e-16 Score=159.56 Aligned_cols=195 Identities=19% Similarity=0.298 Sum_probs=132.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
+++|.+|++.. .+|..+++|.+.... ......+..++...+ .+|+||+++++|.+.+
T Consensus 11 g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 90 (256)
T cd08218 11 GSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKI 90 (256)
T ss_pred CCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHH
Confidence 35778888775 467899999986542 222345556655533 2689999999999988
Q ss_pred ccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc---------
Q 041082 464 YSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF--------- 533 (639)
Q Consensus 464 ~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~--------- 533 (639)
... ...+++.+..+++.+++.|++||| ..+++|+||+++||+++.++.++++|||++..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~ 167 (256)
T cd08218 91 NAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYY 167 (256)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccc
Confidence 653 235789999999999999999999 5689999999999999999999999999997654322100
Q ss_pred --c----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 534 --T----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 534 --~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
+ ....+.++|+| | ||+.|... ....+.+......... +.+.....
T Consensus 168 ~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-----~~~~~~~~~~~~~~~~---------------~~~~~~~~ 227 (256)
T cd08218 168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEA-----GNMKNLVLKIIRGSYP---------------PVSSHYSY 227 (256)
T ss_pred cCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccC-----CCHHHHHHHHhcCCCC---------------CCcccCCH
Confidence 0 01123367777 5 66666532 1122222221111100 01112234
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+.+++.+|++.+|++||+|.||++.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 228 DLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 57788899999999999999999863
No 210
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.67 E-value=3.5e-16 Score=157.61 Aligned_cols=198 Identities=21% Similarity=0.335 Sum_probs=130.3
Q ss_pred CCcCcceEEEec------CCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ------DGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~------~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.||++... ....+++|.+...... ....+..|+..++ .+|+||+++|+|
T Consensus 16 g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 95 (275)
T cd05046 16 GEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDL 95 (275)
T ss_pred cceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcH
Confidence 568899998864 2467889987654433 3455666666533 368899999999
Q ss_pred hhccccCC--------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC
Q 041082 460 EKCLYSSN--------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531 (639)
Q Consensus 460 ~~~l~~~~--------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~ 531 (639)
.+++.... ..++|..+..++.+++.||+||| ..+|+||||||.||+++.++.++++|||+++.......
T Consensus 96 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~ 172 (275)
T cd05046 96 KQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEY 172 (275)
T ss_pred HHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcccccccccCcccc
Confidence 99886422 15899999999999999999999 66799999999999999999999999999875432211
Q ss_pred C-ccc---------------cccccccccc--c-------C-CCCCCCccCCCccchHHHHHhhCCCCcceeeecccccc
Q 041082 532 S-FTQ---------------NTNTCHHRIY--G-------T-RRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSM 585 (639)
Q Consensus 532 ~-~~~---------------~~~~~~~dvy--G-------t-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 585 (639)
. ... ...+.++||| | + |..|..+.. ...+..... ..... .
T Consensus 173 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~--~~~~~~~~~---~~~~~-~-------- 238 (275)
T cd05046 173 YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS--DEEVLNRLQ---AGKLE-L-------- 238 (275)
T ss_pred cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc--hHHHHHHHH---cCCcC-C--------
Confidence 0 000 0011245555 4 2 333332110 000111100 00000 0
Q ss_pred ccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 586 EDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 586 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
.....+...+.+++.+|++.+|++||++.|++.+|.
T Consensus 239 -----~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 239 -----PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 001123346788999999999999999999999875
No 211
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.67 E-value=1.3e-16 Score=160.65 Aligned_cols=193 Identities=26% Similarity=0.350 Sum_probs=132.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.+|++... ++..+++|.+.... ......+..|+++.+ .+|+||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 91 (274)
T cd06609 12 GSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK 91 (274)
T ss_pred CCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHh
Confidence 568899999865 57899999987543 222345556665533 26889999999999887
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF----------- 533 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~----------- 533 (639)
.. .+++.....++.+++.|+.||| ..+++||||+|+||++++++.++++|||+++.........
T Consensus 92 ~~--~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~ 166 (274)
T cd06609 92 PG--KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMA 166 (274)
T ss_pred hc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccC
Confidence 53 6899999999999999999999 6779999999999999999999999999998765331100
Q ss_pred cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 534 TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 534 ~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
+. ...+.++||| | ||+.|....-. .+.... .... ..+.+.. ......+
T Consensus 167 PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~-~~~~----~~~~~~~---------~~~~~~~ 227 (274)
T cd06609 167 PEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFL-IPKN----NPPSLEG---------NKFSKPF 227 (274)
T ss_pred hhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHH-hhhc----CCCCCcc---------cccCHHH
Confidence 00 0123367777 5 77777642110 011100 0000 0000000 0022346
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.+++.+|+..+|++||+|.++++
T Consensus 228 ~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 228 KDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHHHHHHhhCChhhCcCHHHHhh
Confidence 67888999999999999999986
No 212
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.67 E-value=1.3e-16 Score=163.64 Aligned_cols=116 Identities=25% Similarity=0.408 Sum_probs=91.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+|+|.+...... ....+..|+..++ .+|+||+++ ++.+++.
T Consensus 17 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 95 (309)
T cd07872 17 GTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMD 95 (309)
T ss_pred cCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHH
Confidence 568899999864 5688999998754322 1223444555433 268999975 7877776
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.....+++.....++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 96 DCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceec
Confidence 54456889989999999999999999 678999999999999999999999999998754
No 213
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.67 E-value=1e-16 Score=165.57 Aligned_cols=116 Identities=31% Similarity=0.333 Sum_probs=90.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHH-H--------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDM-M--------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~-~--------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... +|..+|+|.+...... ....+..+... + ..+|+||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 85 (323)
T cd05575 6 GSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFF 85 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHH
Confidence 468899999874 6889999998654321 11222222221 1 137899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 86 ~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 86 HLQRE-RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred HHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 88643 35788888999999999999999 678999999999999999999999999998753
No 214
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.67 E-value=2.8e-16 Score=159.21 Aligned_cols=212 Identities=21% Similarity=0.209 Sum_probs=133.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++... ++..+++|++..... ...+.+..|+.+++ .+|+||++++.+..+.
T Consensus 12 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~ 91 (286)
T cd07847 12 GSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELE 91 (286)
T ss_pred cCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHH
Confidence 457889999876 578999998754321 12234555665533 2689999998887766
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----------- 532 (639)
.. ...++|..+..++.+++.||+||| ..+++||||||+||+++.++.++++|||++.........
T Consensus 92 ~~-~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 167 (286)
T cd07847 92 KN-PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYR 167 (286)
T ss_pred hC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccC
Confidence 43 235899999999999999999999 678999999999999999999999999999876443210
Q ss_pred ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCC--CCcceeeecc-----cccccccccc
Q 041082 533 FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLP--ISVMEVVDVN-----LLSMEDKYFT 591 (639)
Q Consensus 533 ~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~--~~~~~~~d~~-----l~~~~~~~~~ 591 (639)
.+. ...+.++|+| | ||+.|....... ..+..+...... ....+..++. +.........
T Consensus 168 aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T cd07847 168 APELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-DQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE 246 (286)
T ss_pred CHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChHHhhhcccccccccccCCCccccc
Confidence 000 1123478888 6 888776532111 111111110000 0000111110 0000000000
Q ss_pred ch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 592 TK----KQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 592 ~~----~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.. ......+.+++.+|++.+|++||++.|++.
T Consensus 247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 247 PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00 111345778999999999999999999875
No 215
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.67 E-value=1.4e-16 Score=178.39 Aligned_cols=117 Identities=26% Similarity=0.303 Sum_probs=93.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.||++... .|..+|+|++..... .....|..|+..++ .+||||+++|+|.++
T Consensus 13 GgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~l 92 (932)
T PRK13184 13 GGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSL 92 (932)
T ss_pred CCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHH
Confidence 568999999864 578999999864322 22345666666543 268999999999988
Q ss_pred cccC----------CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSS----------NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~----------~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+... ....++....+++.++++||+||| ..+|+||||||+||+++.++.++++|||+|+..
T Consensus 93 L~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i 163 (932)
T PRK13184 93 LKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFK 163 (932)
T ss_pred HHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecCcceec
Confidence 7531 124677888999999999999999 668999999999999999999999999999876
No 216
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.67 E-value=2.3e-16 Score=158.20 Aligned_cols=117 Identities=26% Similarity=0.409 Sum_probs=91.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-----hhhhhhHHHHHHHHH----------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-----ERAFKSFDVACDMMK----------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-----~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gs 458 (639)
+++|.+|++... .+..+++|.+.... .+....+..|+.+++ .+++||+++++
T Consensus 13 g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~ 92 (266)
T cd06651 13 GAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGS 92 (266)
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCc
Confidence 457889999764 57899999875432 112234555555532 25789999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
|.+++... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.++++|||+++.+.
T Consensus 93 L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 93 VKDQLKAY-GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 99888643 34788889999999999999999 6679999999999999999999999999987553
No 217
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.67 E-value=3.1e-16 Score=162.22 Aligned_cols=114 Identities=20% Similarity=0.234 Sum_probs=90.7
Q ss_pred CcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
+++.||++.. .+|..+|+|.++... ......+..|+..++ .+|+||+++|+|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 91 (327)
T cd08227 12 DLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC 91 (327)
T ss_pred ceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHH
Confidence 4677888875 568999999987643 222334555555533 26899999999999885
Q ss_pred cC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccc
Q 041082 465 SS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524 (639)
Q Consensus 465 ~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~ 524 (639)
.. ...+++..+..++.+++.||+||| ..+|+||||||+||+++.++.++++|||.+.
T Consensus 92 ~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 92 THFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhh
Confidence 42 345899999999999999999999 6679999999999999999999999998643
No 218
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.67 E-value=1.7e-16 Score=164.77 Aligned_cols=118 Identities=25% Similarity=0.313 Sum_probs=94.0
Q ss_pred CCcCcceEEEecC--CceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD--GMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~--g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~ 461 (639)
+++|.||++.... +..+|+|.+..... .....+..|..+++ .+|+||+++|+|.+
T Consensus 41 G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~ 120 (340)
T PTZ00426 41 GSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFT 120 (340)
T ss_pred cCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHH
Confidence 4588999997543 36899998865432 22334555555533 36899999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
++... ..+++.....++.+++.||+||| ..+|+||||||+|||++.++.+|++|||+++....
T Consensus 121 ~i~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 121 FLRRN-KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 88643 35888889999999999999999 67899999999999999999999999999987643
No 219
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.67 E-value=1e-16 Score=165.91 Aligned_cols=118 Identities=27% Similarity=0.332 Sum_probs=94.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..|+..++ .+|+||+++|+|.++
T Consensus 29 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 108 (329)
T PTZ00263 29 GSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTH 108 (329)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHH
Confidence 458899999875 578999999865432 22334555655533 268999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 109 l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 109 LRKA-GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 8653 35778888889999999999999 67899999999999999999999999999987644
No 220
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.67 E-value=3.2e-16 Score=156.71 Aligned_cols=196 Identities=26% Similarity=0.337 Sum_probs=132.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.+++.+|++... ++..+++|.+...... ....+..|+..++ .+|+||+++++|.+++
T Consensus 11 G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (264)
T cd06626 11 GTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELL 90 (264)
T ss_pred CCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHH
Confidence 357889998764 6789999998765442 4456666666533 2689999999999988
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---------- 533 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---------- 533 (639)
... ..+++..+..++.++++|++||| +.+|+|+|||+.||+++.++.+||+|||++..........
T Consensus 91 ~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T cd06626 91 EHG-RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGT 166 (264)
T ss_pred hhc-CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCC
Confidence 753 34789999999999999999999 6779999999999999999999999999987654322110
Q ss_pred -----cc----c---ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccc
Q 041082 534 -----TQ----N---TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTT 592 (639)
Q Consensus 534 -----~~----~---~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 592 (639)
+. . ..+.++||| | +|+.|....- ........+.. . ..+.+..
T Consensus 167 ~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~-~~~~~~~~~~~---~-----~~~~~~~-------- 229 (264)
T cd06626 167 PAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD-NEFQIMFHVGA---G-----HKPPIPD-------- 229 (264)
T ss_pred cCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc-chHHHHHHHhc---C-----CCCCCCc--------
Confidence 00 0 123366777 5 6766654211 11111111100 0 0000000
Q ss_pred hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 593 KKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 593 ~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.......+.+++..|++.+|++||++.|++.
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 230 SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0112334567888999999999999999874
No 221
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.67 E-value=2.6e-16 Score=157.33 Aligned_cols=117 Identities=34% Similarity=0.497 Sum_probs=93.6
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.+|++.... |..+++|.+..... .....+..+.+.++ .+++||+++++|.++
T Consensus 4 g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (265)
T cd05579 4 GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASL 83 (265)
T ss_pred CCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHH
Confidence 3578899998764 88999999865432 22334444443322 368999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+.... .+++..+.+++.++++||+||| ..+++||||+|+||+++.++.++++|||++....
T Consensus 84 l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~ 144 (265)
T cd05579 84 LENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGL 144 (265)
T ss_pred HHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcc
Confidence 87533 6899999999999999999999 6789999999999999999999999999987543
No 222
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.67 E-value=3.3e-16 Score=161.88 Aligned_cols=116 Identities=29% Similarity=0.316 Sum_probs=88.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHH-H--------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDM-M--------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~-~--------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... ++..+|+|++..... .....+..+... + ..+|+||+++|+|.+
T Consensus 6 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (325)
T cd05602 6 GSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFY 85 (325)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHH
Confidence 468899999865 567899999864321 111222222211 1 136899999999998
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++... ..+.......++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 ~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 86 HLQRE-RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred HHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 88653 34667777789999999999999 678999999999999999999999999998754
No 223
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.67 E-value=2.9e-16 Score=156.97 Aligned_cols=196 Identities=23% Similarity=0.294 Sum_probs=137.0
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.+++.+|++.... +..+++|.+..... .....+..++.... .+|+||+++++|.+++.
T Consensus 12 g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 91 (264)
T cd06623 12 GSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLK 91 (264)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHH
Confidence 4678899998764 88999999876543 23445666665532 36899999999999986
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCC-CCeEeecCCCCceeecCCcceeeccccccccccccCCCc----------
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYS-TPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---------- 533 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~-~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---------- 533 (639)
.. ..+++..+.+++.++++|++|+| . .+++||||+++||+++.++.++++|||+++.........
T Consensus 92 ~~-~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~ 167 (264)
T cd06623 92 KV-GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYM 167 (264)
T ss_pred Hc-CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeeccccc
Confidence 53 45899999999999999999999 6 789999999999999999999999999988764332210
Q ss_pred -cc----cccccccccc--c-------CCCCCCCccCC-CccchHHHHHhhCCCCcceeeeccccccccccccchHH-HH
Q 041082 534 -TQ----NTNTCHHRIY--G-------TRRNPQMNFFS-GEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ-CL 597 (639)
Q Consensus 534 -~~----~~~~~~~dvy--G-------tg~~p~~~~~~-~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~ 597 (639)
+. ...+.++|+| | ||+.|...... .-..+..++. ... .+.+ ... ..
T Consensus 168 ~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~-----~~~~----------~~~~~~ 229 (264)
T cd06623 168 SPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC---DGP-----PPSL----------PAEEFS 229 (264)
T ss_pred CHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh---cCC-----CCCC----------CcccCC
Confidence 00 1122367888 6 77777653221 1111222211 110 0000 011 33
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 598 SFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 598 ~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
..+.+++..|++.+|++||++.|+++.
T Consensus 230 ~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 230 PEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 467778889999999999999999874
No 224
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.67 E-value=1.5e-16 Score=164.24 Aligned_cols=116 Identities=29% Similarity=0.389 Sum_probs=90.7
Q ss_pred CCcCcceEEEec----CCceeeeEEechhhh----hhhhhHHHHHHHHH--------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ----DGMKVAVKVFDLQYE----RAFKSFDVACDMMK--------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~----~g~~vavK~l~~~~~----~~~~~f~~e~~~~~--------------------~Lv~ey~~~gs 458 (639)
.++|.||++... .+..+|+|.+..... .....+..|...++ .+|+||+++|+
T Consensus 7 G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 86 (323)
T cd05584 7 GGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 86 (323)
T ss_pred cCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCch
Confidence 468899988753 568899999864321 12233444554432 36899999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
|.+++... ..+.+.....++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 87 L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 87 LFMHLERE-GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKES 150 (323)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence 99888643 34677778889999999999999 678999999999999999999999999998753
No 225
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.67 E-value=1.5e-16 Score=163.79 Aligned_cols=115 Identities=27% Similarity=0.403 Sum_probs=90.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHH---------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMM---------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .|..+|+|.+..... .....+..+...+ ..+|+||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 85 (316)
T cd05620 6 GSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMF 85 (316)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHH
Confidence 468899999875 578999999875431 1112222333221 137899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++... ..+++.+...++.++++||+||| ..+|+||||||+||+++.++.++|+|||+++.
T Consensus 86 ~i~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05620 86 HIQDK-GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145 (316)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence 87643 35788888999999999999999 67899999999999999999999999999874
No 226
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.67 E-value=3.3e-16 Score=158.84 Aligned_cols=119 Identities=29% Similarity=0.440 Sum_probs=93.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.+|++... .+..+|+|.+..... .....+..+++.++ .+|+||+++++|..++.
T Consensus 12 g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 91 (286)
T cd06622 12 GNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYA 91 (286)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHH
Confidence 467899998875 678999998764321 12234545554432 26899999999988876
Q ss_pred cC--CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 465 SS--NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 465 ~~--~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
.. ...+++.....++.+++.|+.|||+ ..+|+||||||+||+++.++.++++|||+++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 92 GGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred hccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 53 2368999999999999999999995 3479999999999999999999999999987653
No 227
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.66 E-value=2.6e-16 Score=162.90 Aligned_cols=115 Identities=24% Similarity=0.325 Sum_probs=91.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+..... .....+..|..+++ .+|+||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~ 85 (329)
T cd05588 6 GSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMF 85 (329)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHH
Confidence 457899998864 578999999875422 12233444444321 37899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++... ..+++..+..++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 86 HMQRQ-RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccc
Confidence 87543 45899999999999999999999 67899999999999999999999999999874
No 228
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.66 E-value=2.5e-16 Score=159.66 Aligned_cols=208 Identities=22% Similarity=0.254 Sum_probs=132.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++... .+..+++|.+...... ..+.+..|++.++ .+|+||++++++..+.
T Consensus 12 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 91 (286)
T cd07846 12 GSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLE 91 (286)
T ss_pred CCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHH
Confidence 467889999875 4789999987543221 2234445554422 3689999998888766
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----------- 532 (639)
.. ...++|.+...++.++++|++||| ..+++||||+|+||++++++.++++|||+++.+......
T Consensus 92 ~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ 167 (286)
T cd07846 92 KY-PNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYR 167 (286)
T ss_pred hc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeecc
Confidence 53 234899999999999999999999 567999999999999999999999999998765432110
Q ss_pred ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHh-----hCCCCcceee----------ecccc
Q 041082 533 FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVND-----LLPISVMEVV----------DVNLL 583 (639)
Q Consensus 533 ~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~-----~~~~~~~~~~----------d~~l~ 583 (639)
.+. ...+.++||| | ||+.|.... ..+..+... .+.....+.. .+...
T Consensus 168 aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (286)
T cd07846 168 APELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD----SDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVK 243 (286)
T ss_pred CcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCC----chHHHHHHHHHHhCCCchhhHHHhccchHhhcccccccc
Confidence 000 1122368898 7 787665421 111111110 0000000111 11100
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
... ......+.....+.+++.+|++.+|++||+|.+|++
T Consensus 244 ~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 244 EIE-PLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred Ccc-hHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 000001123456888999999999999999999875
No 229
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.66 E-value=2.9e-16 Score=156.89 Aligned_cols=118 Identities=33% Similarity=0.450 Sum_probs=96.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++... .+..+++|.+........+.+..++..++ .+++||+++++|.+++..
T Consensus 14 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~ 93 (262)
T cd06613 14 GTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV 93 (262)
T ss_pred CCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 457889998764 46789999987655444556666666533 267999999999998876
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
....++..+...++.+++.|++||| ..+++||||||+||++++++.++++|||++....
T Consensus 94 ~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 94 TRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhh
Confidence 5456899999999999999999999 6689999999999999999999999999987654
No 230
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.66 E-value=2.2e-16 Score=157.27 Aligned_cols=194 Identities=20% Similarity=0.248 Sum_probs=130.4
Q ss_pred CcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~ 464 (639)
++|.+|.+.. .++..+++|.++... ......+..|++.++. +++||+++|+|.+++.
T Consensus 12 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~ 91 (256)
T cd08221 12 AFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIV 91 (256)
T ss_pred CCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHH
Confidence 4566666654 457889999876543 2334456666666432 5799999999999887
Q ss_pred cC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc----------
Q 041082 465 SS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---------- 533 (639)
Q Consensus 465 ~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---------- 533 (639)
.. ...+++.++..++.++++|++||| ..+++||||||+||++++++.+|++|||+++.........
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ 168 (256)
T cd08221 92 RQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYM 168 (256)
T ss_pred hccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCcccc
Confidence 53 346899999999999999999999 5679999999999999999999999999998664332110
Q ss_pred -cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 534 -TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 534 -~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
+. ...+.++||| | +|+.|... ....+.+.......... ........
T Consensus 169 ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 228 (256)
T cd08221 169 SPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA-----TNPLNLVVKIVQGNYTP---------------VVSVYSSE 228 (256)
T ss_pred CHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC-----CCHHHHHHHHHcCCCCC---------------CccccCHH
Confidence 00 0112246666 4 55555432 11112221111111000 01122345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+.+++..|++.+|++||++.++++.
T Consensus 229 ~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 229 LISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHHHcccCcccCCCHHHHhhC
Confidence 7778889999999999999999875
No 231
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.66 E-value=3.1e-16 Score=157.21 Aligned_cols=117 Identities=31% Similarity=0.405 Sum_probs=94.2
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.. ..+..+++|.+..........+..++..++ .+|+||+++|+|.+++..
T Consensus 20 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 99 (267)
T cd06645 20 GTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV 99 (267)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh
Confidence 46788999875 457899999987654433344555554432 268999999999998764
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
. ..+++.+...++.+++.|+.||| ..+++|+||||+||+++.++.++++|||++....
T Consensus 100 ~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06645 100 T-GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQIT 157 (267)
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence 3 35889999999999999999999 5689999999999999999999999999987553
No 232
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.66 E-value=1.4e-16 Score=162.19 Aligned_cols=117 Identities=33% Similarity=0.421 Sum_probs=90.4
Q ss_pred cCcceEEEe-cCCceeeeEEechhhhhhh---hhHHHHHHHHH---------------------hhhhhcCCCCCchhcc
Q 041082 409 FGSIYKARI-QDGMKVAVKVFDLQYERAF---KSFDVACDMMK---------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 409 ~g~vy~~~l-~~g~~vavK~l~~~~~~~~---~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l 463 (639)
+..|++++- ..+..+|||+++-.+.-.. +-...|...+. ++|.||.++|+|.+++
T Consensus 86 YStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i 165 (604)
T KOG0592|consen 86 YSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLI 165 (604)
T ss_pred ceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHH
Confidence 456777764 4678999999986653221 12223333322 3588999999999999
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
++- ..++.....-+|.+|..|++||| +.+||||||||.|||||+||+.+|+|||-|+.+.+.
T Consensus 166 ~K~-Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 166 KKY-GSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred HHh-CcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 863 24666655678999999999999 889999999999999999999999999999998754
No 233
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.66 E-value=2.4e-16 Score=156.23 Aligned_cols=196 Identities=26% Similarity=0.367 Sum_probs=135.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
+++|.+|++... ++..+++|++..........+..++..++ .+++||+++++|.+++..
T Consensus 11 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 90 (253)
T cd05122 11 GGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS 90 (253)
T ss_pred CCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhh
Confidence 457899999875 67889999987665444456666766533 267899999999998876
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC--CC--c------c-
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED--QS--F------T- 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~--~~--~------~- 534 (639)
....+++..+..++.+++.|++||| ..+++||||+|+||++++++.++|+|||++....... .. . +
T Consensus 91 ~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE 167 (253)
T cd05122 91 TNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPE 167 (253)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHH
Confidence 5456899999999999999999999 5789999999999999999999999999988765432 00 0 0
Q ss_pred ---ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHH
Q 041082 535 ---QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFN 602 (639)
Q Consensus 535 ---~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~ 602 (639)
....+.+.||| | +|+.|....- ..+...........+..+ .......+.+
T Consensus 168 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 229 (253)
T cd05122 168 VINGKPYDYKADIWSLGITAIELAEGKPPYSELP-----PMKALFKIATNGPPGLRN-------------PEKWSDEFKD 229 (253)
T ss_pred HHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHhcCCCCcCc-------------ccccCHHHHH
Confidence 01123367777 5 6666654210 011110000000000000 0111345777
Q ss_pred HHhhccCCCCCCCCCHHHHHH
Q 041082 603 LAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 603 l~~~C~~~~p~~RP~m~~v~~ 623 (639)
++.+|++.+|++||++.|+++
T Consensus 230 ~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 230 FLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHccCChhhCCCHHHHhc
Confidence 888999999999999999875
No 234
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.66 E-value=1.5e-16 Score=164.28 Aligned_cols=115 Identities=26% Similarity=0.334 Sum_probs=90.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|++..... .....+..|...+. .+||||+++|+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 90 (324)
T cd05587 11 GSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 90 (324)
T ss_pred ccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHH
Confidence 468899999865 467899999865421 12223333433321 26899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++.
T Consensus 91 ~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05587 91 HIQQV-GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKE 150 (324)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCccee
Confidence 87643 35789999999999999999999 67899999999999999999999999999874
No 235
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.66 E-value=2.4e-16 Score=159.65 Aligned_cols=212 Identities=21% Similarity=0.267 Sum_probs=136.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
+++|.+|++... +|..+++|.+.... ......+..++...+ .+|+||+ +++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~ 89 (286)
T cd07832 11 GAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVL 89 (286)
T ss_pred CCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHH
Confidence 457889999864 67899999986543 222345555555432 3789999 99999988
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC---C--------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ---S-------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~---~-------- 532 (639)
......+++.++.+++.++++||+||| ..+++|+|||++||+++.++.++++|||+++....... .
T Consensus 90 ~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y 166 (286)
T cd07832 90 RDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWY 166 (286)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccc
Confidence 765566899999999999999999999 66899999999999999999999999999887644321 0
Q ss_pred -ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC-------cceeeeccccccccccc
Q 041082 533 -FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS-------VMEVVDVNLLSMEDKYF 590 (639)
Q Consensus 533 -~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~-------~~~~~d~~l~~~~~~~~ 590 (639)
.+. ...+.++||| | ||+.+.... .......++...+... ..+.-+..-........
T Consensus 167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T cd07832 167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE--NDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKP 244 (286)
T ss_pred cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC--CHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCc
Confidence 000 0113478998 6 786554321 1111111221111100 00000000000000000
Q ss_pred ----cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 591 ----TTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 591 ----~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
...++....+.++..+|+..+|++||++.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 245 IPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred chHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0001223677889999999999999999999863
No 236
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.66 E-value=4.4e-16 Score=157.72 Aligned_cols=116 Identities=28% Similarity=0.435 Sum_probs=90.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++... .+..+++|.+..... .....+..|+..++ .+|+||++ |++.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~ 89 (285)
T cd07861 11 GTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYL 89 (285)
T ss_pred cCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHH
Confidence 457889999864 678999998865432 12234455555532 36889997 6887777
Q ss_pred cc--CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 464 YS--SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 464 ~~--~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.. ....+++.....++.+++.||+||| ..+++||||||+||+++.++.++|+|||+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 90 DSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred hcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence 54 2246899999999999999999999 678999999999999999999999999998754
No 237
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.66 E-value=3.5e-16 Score=157.76 Aligned_cols=194 Identities=23% Similarity=0.378 Sum_probs=129.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh-hhhhhHHHHHHHHH-----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE-RAFKSFDVACDMMK-----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~-----------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.+|++.. .++..+++|.++.... .....+..++..++ .+|+||+++++|.+
T Consensus 12 g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (277)
T cd06917 12 GAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRT 91 (277)
T ss_pred cCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHH
Confidence 46789999986 5678999998864321 22234444443321 26899999999998
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------- 533 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------- 533 (639)
++... .++|.....++.+++.|++||| ..+++||||+|+||+++.++.++++|||++..........
T Consensus 92 ~~~~~--~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 166 (277)
T cd06917 92 LMKAG--PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPY 166 (277)
T ss_pred HHHcc--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcc
Confidence 87543 6899999999999999999999 6789999999999999999999999999987664432110
Q ss_pred ---cc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 534 ---TQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 534 ---~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
+. ...+.++|+| | +|+.|.... ....+.... .. ...+.+.. ...
T Consensus 167 y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~-----~~~~~~~~~-~~----~~~~~~~~---------~~~ 227 (277)
T cd06917 167 WMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV-----DAFRAMMLI-PK----SKPPRLED---------NGY 227 (277)
T ss_pred eeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC-----Chhhhhhcc-cc----CCCCCCCc---------ccC
Confidence 00 0112356666 5 566655321 111111100 00 00011110 013
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
...+.+++.+|++.+|++||++.|++..
T Consensus 228 ~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 228 SKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 3467788999999999999999999863
No 238
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.66 E-value=2.8e-16 Score=159.28 Aligned_cols=196 Identities=26% Similarity=0.325 Sum_probs=132.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++... ++..+++|++..... ....+..|++.++ .+++||+++++|.+++..
T Consensus 30 g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 108 (286)
T cd06614 30 GASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQ 108 (286)
T ss_pred CCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHH
Confidence 357889998876 678899999876543 3345555655532 368899999999999876
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----------T 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----------~ 534 (639)
....+++..+..++.+++.||+||| ..+++|+||||+||+++.++.++|+|||++.......... +
T Consensus 109 ~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~P 185 (286)
T cd06614 109 NFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAP 185 (286)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCH
Confidence 4446999999999999999999999 6789999999999999999999999999887554321100 0
Q ss_pred c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
. ...+.++|+| | ||+.|.... ........+.. ...... .........+.
T Consensus 186 E~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~-~~~~~~~~~~~----~~~~~~-------------~~~~~~~~~l~ 247 (286)
T cd06614 186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE-PPLRALFLITT----KGIPPL-------------KNPEKWSPEFK 247 (286)
T ss_pred hHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHh----cCCCCC-------------cchhhCCHHHH
Confidence 0 0112356666 5 565554321 00000000000 000000 01112334577
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+++.+|++.+|.+||++.+|++.
T Consensus 248 ~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 248 DFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHHHHHhccChhhCcCHHHHhhC
Confidence 88999999999999999999863
No 239
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=1.3e-16 Score=165.64 Aligned_cols=190 Identities=24% Similarity=0.289 Sum_probs=130.6
Q ss_pred CcceEEE-ecCCceeeeEEechhhh---hhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhcccc
Q 041082 410 GSIYKAR-IQDGMKVAVKVFDLQYE---RAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 410 g~vy~~~-l~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~ 465 (639)
|.|..|+ ...|+.+|||.+....+ .....+..|+-+|+. ||.||+++|-|++++..
T Consensus 26 g~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~ 105 (786)
T KOG0588|consen 26 GCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR 105 (786)
T ss_pred ceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh
Confidence 3444444 24689999999865521 123456667777664 67899999999998875
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----ccc----
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----TQN---- 536 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----~~~---- 536 (639)
.+ .+......++..||..|+.|.| ...|+|||+||.|+|||...+.||+|||+|.+-.++..-. ++.
T Consensus 106 kG-~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PE 181 (786)
T KOG0588|consen 106 KG-PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPE 181 (786)
T ss_pred hC-CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCch
Confidence 43 4666667889999999999999 7889999999999999999999999999998765543210 111
Q ss_pred ------ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 537 ------TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 537 ------~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
....++||| | ||+-|++| .++..... .+..+..++ +.+...++-
T Consensus 182 IV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLl-KV~~G~f~M---------------Ps~Is~eaQ 240 (786)
T KOG0588|consen 182 IVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLL-KVQRGVFEM---------------PSNISSEAQ 240 (786)
T ss_pred hhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHH-HHHcCcccC---------------CCcCCHHHH
Confidence 111278888 6 88888874 22322211 111111111 222233455
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+|..+.+..||+.|-||.||.++
T Consensus 241 dLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 241 DLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHHHHHhccCccccccHHHHhhC
Confidence 67778889999999999999875
No 240
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.66 E-value=1.2e-18 Score=151.37 Aligned_cols=159 Identities=30% Similarity=0.499 Sum_probs=121.4
Q ss_pred cEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecc
Q 041082 53 RVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQ 132 (639)
Q Consensus 53 ~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 132 (639)
.++.|.|+.|.++ .+|+.++.|.+|+.|++++|++. .+|.+++.+++|+.|++.-|++. ..|..|+.++.|+.|||.
T Consensus 34 ~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 34 NITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLT 110 (264)
T ss_pred hhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhcc
Confidence 5777888888887 46777888888888888888887 67888888888888888888875 578888888888888888
Q ss_pred cccCcc-ccCccccCCCCCCEEecCCCCCCCCCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccC
Q 041082 133 NNFLTG-TIHSSIFNLSSLSDLDLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFG 211 (639)
Q Consensus 133 ~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 211 (639)
+|++.. ..|+.|+.++.|+.|+|+.|.+. .+|..++++++|+.|.+.+|.+.. .|..++
T Consensus 111 ynnl~e~~lpgnff~m~tlralyl~dndfe-------------------~lp~dvg~lt~lqil~lrdndll~-lpkeig 170 (264)
T KOG0617|consen 111 YNNLNENSLPGNFFYMTTLRALYLGDNDFE-------------------ILPPDVGKLTNLQILSLRDNDLLS-LPKEIG 170 (264)
T ss_pred ccccccccCCcchhHHHHHHHHHhcCCCcc-------------------cCChhhhhhcceeEEeeccCchhh-CcHHHH
Confidence 888753 56777777777777777776665 456677777777777777777654 366677
Q ss_pred CCCCCCEEEccCCCCCCCCCcch
Q 041082 212 NLINLKRLNLYDNYLTSSTPELS 234 (639)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~~~~~ 234 (639)
.++.|+.|.+.+|.++-.+|++.
T Consensus 171 ~lt~lrelhiqgnrl~vlppel~ 193 (264)
T KOG0617|consen 171 DLTRLRELHIQGNRLTVLPPELA 193 (264)
T ss_pred HHHHHHHHhcccceeeecChhhh
Confidence 77788888888887777666543
No 241
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.66 E-value=4.4e-16 Score=158.47 Aligned_cols=201 Identities=23% Similarity=0.270 Sum_probs=129.1
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.. .++..+++|.++.........+..++..++ .+|+||+++|+|.+++..
T Consensus 30 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (293)
T cd06647 30 GASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109 (293)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh
Confidence 45789999874 467889999986554433444555554422 368899999999998864
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc----------
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ---------- 535 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~---------- 535 (639)
..+++..+..++.++++|++||| ..+++|||||++||+++.++.++|+|||++............
T Consensus 110 --~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~P 184 (293)
T cd06647 110 --TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184 (293)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCc
Confidence 34789999999999999999999 678999999999999999999999999988755432211000
Q ss_pred -----cccccccccccCCCCCCCccCCCccchHHHHHhhCCCCcc---eeeeccccccccccccchHHHHHHHHHHHhhc
Q 041082 536 -----NTNTCHHRIYGTRRNPQMNFFSGEMTLKSWVNDLLPISVM---EVVDVNLLSMEDKYFTTKKQCLSFVFNLAMEC 607 (639)
Q Consensus 536 -----~~~~~~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C 607 (639)
...+.++|+| +.|..+++......|.... +.+....... .............+.+++.+|
T Consensus 185 E~~~~~~~~~~~Dv~-----------slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 252 (293)
T cd06647 185 EVVTRKAYGPKVDIW-----------SLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPELQNPEKLSAIFRDFLNRC 252 (293)
T ss_pred hhhccCCCCchhhHH-----------HHHHHHHHHHhCCCCCCCCChhhheeehhcCC-CCCCCCccccCHHHHHHHHHH
Confidence 0012245555 3333333333222221100 0000000000 000001111233567788999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 041082 608 TAESPKQRINAKESVTR 624 (639)
Q Consensus 608 ~~~~p~~RP~m~~v~~~ 624 (639)
++.+|++||++.+++.+
T Consensus 253 l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 253 LEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999864
No 242
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.66 E-value=1.9e-16 Score=158.56 Aligned_cols=116 Identities=27% Similarity=0.441 Sum_probs=93.5
Q ss_pred CCcCcceEEEecCCceeeeEEechhhh------hhhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYE------RAFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~------~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.||++....+..+|+|.+..... .....+..|++.++ .+++||+++|+|.
T Consensus 11 g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (265)
T cd06631 11 GAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSIS 90 (265)
T ss_pred cCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHH
Confidence 457889999888888999998764321 12234555555532 3689999999999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+++... ..+++.....++.+++.|++||| ..+++|+||||+||+++.++.++++|||+++..
T Consensus 91 ~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 91 SILNRF-GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred HHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 988643 35788888999999999999999 667999999999999999999999999998765
No 243
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.66 E-value=2.8e-16 Score=156.44 Aligned_cols=194 Identities=23% Similarity=0.381 Sum_probs=129.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++.. ..+..+++|.++.... .....+..|+..++ .+|+||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (256)
T cd08220 11 GAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYI 90 (256)
T ss_pred cCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHH
Confidence 45778898775 3578899998865421 22344555555532 3689999999999998
Q ss_pred ccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-CcceeeccccccccccccCCCc--------
Q 041082 464 YSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLKEDQSF-------- 533 (639)
Q Consensus 464 ~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~~~~~~-------- 533 (639)
... ...+++..+.+++.++++|++||| ..+++||||||+||+++. +..+|++|||+++.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y 167 (256)
T cd08220 91 QKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCY 167 (256)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcc
Confidence 753 345899999999999999999999 668999999999999985 4568999999998665332110
Q ss_pred --cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 534 --TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 534 --~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
+. ...+.++||| | +|+.|... .+....+.......... .+.....
T Consensus 168 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~---------------~~~~~~~ 227 (256)
T cd08220 168 ISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-----ANLPALVLKIMSGTFAP---------------ISDRYSP 227 (256)
T ss_pred cCchhccCCCCCcccchHHHHHHHHHHHhCCCCccc-----CchHHHHHHHHhcCCCC---------------CCCCcCH
Confidence 00 1123357777 5 56655432 11222221111110000 0111233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.+.++..+|++.+|++||||.|+++
T Consensus 228 ~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 228 DLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhh
Confidence 5678889999999999999999986
No 244
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.66 E-value=3.9e-16 Score=158.03 Aligned_cols=212 Identities=24% Similarity=0.250 Sum_probs=130.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++... .|..+++|.+...... ....+..|+..++ .+++||++ +++.+++
T Consensus 11 g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~ 89 (284)
T cd07839 11 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYF 89 (284)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHH
Confidence 457889998864 6889999988653221 1233444554432 26789997 5787777
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----------- 532 (639)
......+++.....++.++++||+||| ..+++||||||+||+++.++.++++|||+++........
T Consensus 90 ~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ 166 (284)
T cd07839 90 DSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYR 166 (284)
T ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCc
Confidence 654456899999999999999999999 678999999999999999999999999999865422110
Q ss_pred ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCC-C------cceeeecccccccccc--
Q 041082 533 FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPI-S------VMEVVDVNLLSMEDKY-- 589 (639)
Q Consensus 533 ~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~-~------~~~~~d~~l~~~~~~~-- 589 (639)
.+. ...+.++||| | ||+.|..........+ +........ . ..+..+..........
T Consensus 167 aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd07839 167 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL-KRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTS 245 (284)
T ss_pred ChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH-HHHHHHhCCCChHHhHHhhhcccccccCCCCCcch
Confidence 011 1123478999 7 7887753211111000 001000000 0 0001110000000000
Q ss_pred -ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 590 -FTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 590 -~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.+........+.++..+|++.+|++|||+.|++.
T Consensus 246 ~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 246 LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000112345678899999999999999999875
No 245
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.66 E-value=2.8e-16 Score=162.31 Aligned_cols=116 Identities=26% Similarity=0.314 Sum_probs=90.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHH---------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMM---------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+...... ....+..+...+ ..+|+||+++|+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~ 90 (323)
T cd05616 11 GSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY 90 (323)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHH
Confidence 468899999865 4679999998654221 111222222221 127899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.+... ..+++.++..++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 91 QIQQV-GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 87643 35889999999999999999999 678999999999999999999999999999754
No 246
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.66 E-value=5.2e-16 Score=159.85 Aligned_cols=195 Identities=23% Similarity=0.335 Sum_probs=129.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.+|++... ++..+++|.+..... .....+..|++.++ .+|+||++ |++.+.
T Consensus 36 G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~ 114 (317)
T cd06635 36 GSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDL 114 (317)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHH
Confidence 457889998864 678999998864322 22234555555432 37899997 577777
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------ccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------FTQ 535 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------~~~ 535 (639)
+......++|.++..++.+++.|+.||| ..+|+||||+|+||+++.++.++++|||++......... .+.
T Consensus 115 ~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE 191 (317)
T cd06635 115 LEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPE 191 (317)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChh
Confidence 6554556899999999999999999999 668999999999999999999999999998765432211 000
Q ss_pred -------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 536 -------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 536 -------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
...+.++||| | +|+.|..+. .....+..+.....+. .........
T Consensus 192 ~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-~~~~~~~~~~~~~~~~------------------~~~~~~~~~ 252 (317)
T cd06635 192 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-NAMSALYHIAQNESPT------------------LQSNEWSDY 252 (317)
T ss_pred hhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc-cHHHHHHHHHhccCCC------------------CCCccccHH
Confidence 1122367777 5 666665321 0001111111100000 001122335
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+.+++.+|++.+|++||++.+|++.
T Consensus 253 l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 253 FRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred HHHHHHHHccCCcccCcCHHHHHhC
Confidence 6778889999999999999999975
No 247
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.65 E-value=2.2e-16 Score=159.47 Aligned_cols=196 Identities=19% Similarity=0.217 Sum_probs=125.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHH---H--------------------HhhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDM---M--------------------KKLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~---~--------------------~~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+|+|.+...... ....+..+..+ . ..+|+||+++|+|
T Consensus 5 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 84 (279)
T cd05633 5 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDL 84 (279)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCH
Confidence 458899998864 5789999987543211 11111122111 1 1368999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------- 532 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------- 532 (639)
.+++... ..++|.....++.+++.|++||| ..+|+||||||+||+++.++.++++|||+++........
T Consensus 85 ~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 160 (279)
T cd05633 85 HYHLSQH-GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 160 (279)
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcC
Confidence 8887643 35899999999999999999999 667999999999999999999999999998754321110
Q ss_pred --ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 533 --FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 533 --~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
.+. ...+.++|+| | ||+.|....... .. ..+...... .++. .++..
T Consensus 161 y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~-~~~~~~~~~-----~~~~----------~~~~~ 222 (279)
T cd05633 161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DK-HEIDRMTLT-----VNVE----------LPDSF 222 (279)
T ss_pred ccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCc--CH-HHHHHHhhc-----CCcC----------Ccccc
Confidence 000 0112356777 5 666665432111 11 111110000 0000 01122
Q ss_pred HHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRI-----NAKESVTR 624 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP-----~m~~v~~~ 624 (639)
...+.++...|+..+|++|| +++|++++
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 34566778899999999999 58888764
No 248
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.65 E-value=8.1e-16 Score=161.70 Aligned_cols=116 Identities=28% Similarity=0.309 Sum_probs=91.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.||++... .+..+|+|.+..... .....+..|+..++ .+|+||+++|+|.++
T Consensus 54 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (370)
T cd05596 54 GAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNL 133 (370)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHH
Confidence 468899998764 578999999864321 12233445555532 378999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+... .++......++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 134 l~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 134 MSNY--DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred HHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 8643 3666667889999999999999 6789999999999999999999999999997654
No 249
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.65 E-value=2.1e-16 Score=161.16 Aligned_cols=195 Identities=23% Similarity=0.294 Sum_probs=130.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.. .++..+++|.++.........+..|+..++ .+++||+++++|..++..
T Consensus 32 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 111 (297)
T cd06659 32 GSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ 111 (297)
T ss_pred CCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh
Confidence 46788999875 468899999987544333344555554422 268899999999887753
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-----------c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-----------T 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-----------~ 534 (639)
..+++..+..++.+++.|++||| ..+++|||||++||+++.++.++|+|||+++......... +
T Consensus 112 --~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP 186 (297)
T cd06659 112 --TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP 186 (297)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCH
Confidence 35889999999999999999999 6679999999999999999999999999987554321110 0
Q ss_pred ----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 ----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
....+.++||| | +|+.|.... ........+.. .. .+... ........+.
T Consensus 187 E~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~--~~~~~~~~~~~---~~-----~~~~~--------~~~~~~~~l~ 248 (297)
T cd06659 187 EVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD--SPVQAMKRLRD---SP-----PPKLK--------NAHKISPVLR 248 (297)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHhc---cC-----CCCcc--------ccCCCCHHHH
Confidence 01123367777 5 676665421 10011111110 00 00000 0011123466
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+++.+|++.+|++||++.++++.
T Consensus 249 ~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 249 DFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHhcCCcccCcCHHHHhhC
Confidence 78889999999999999999984
No 250
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.65 E-value=6e-16 Score=158.61 Aligned_cols=195 Identities=24% Similarity=0.333 Sum_probs=129.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.+|++... ++..+++|.+..... .....+..|+..++ .+|+||++ |++.+.
T Consensus 26 g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~ 104 (307)
T cd06607 26 GSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDI 104 (307)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHH
Confidence 457889999864 578999998754322 22344555655533 26889987 577666
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------ccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------FTQ 535 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------~~~ 535 (639)
+......+++..+..++.+++.||.||| ..+|+||||+|+||++++++.++++|||+++........ .+.
T Consensus 105 ~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE 181 (307)
T cd06607 105 LEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPE 181 (307)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCce
Confidence 6544456899999999999999999999 667999999999999999999999999999765433211 000
Q ss_pred -------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 536 -------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 536 -------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
...+.++||| | ||+.|.... .-...+....... .+.+ ....+...
T Consensus 182 ~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~-----~~~~~~~~~~~~~-----~~~~---------~~~~~~~~ 242 (307)
T cd06607 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALYHIAQND-----SPTL---------SSNDWSDY 242 (307)
T ss_pred eeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCc-----cHHHHHHHHhcCC-----CCCC---------CchhhCHH
Confidence 1122356776 5 666654321 1101110000000 0000 01223446
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+.++..+|++.+|++||+|.+|+..
T Consensus 243 ~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 243 FRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcC
Confidence 7888999999999999999999863
No 251
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.65 E-value=5.3e-16 Score=156.94 Aligned_cols=118 Identities=31% Similarity=0.382 Sum_probs=88.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-hhhhHHHHHHH-H--------------------HhhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-AFKSFDVACDM-M--------------------KKLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~f~~e~~~-~--------------------~~Lv~ey~~~gsL~~~l 463 (639)
+++|.||++... +|..+|+|.+...... ....+..+... . ..+++||++ |+|.+.+
T Consensus 12 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l 90 (283)
T cd06617 12 GAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFY 90 (283)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHH
Confidence 568899998865 5899999988654321 11222223222 1 136889997 6777766
Q ss_pred cc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 464 YS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 464 ~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
.. ....+++....+++.+++.|++|||.. .+++||||||+||+++.++.+||+|||+++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 91 KKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred HHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 43 234689999999999999999999942 379999999999999999999999999998654
No 252
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.65 E-value=2.3e-16 Score=159.81 Aligned_cols=118 Identities=25% Similarity=0.319 Sum_probs=93.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. .++..+|+|.+..... .....+..|++.++. +++||+++|+|..+
T Consensus 11 G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (285)
T cd05632 11 GGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHH
Confidence 56899999876 4678999999865432 112234455555332 68999999999888
Q ss_pred ccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+.. ....+++.....++.+++.||.||| ..+|+||||||+||++++++.++++|||+++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 91 IYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIP 153 (285)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence 764 2346899999999999999999999 6789999999999999999999999999987543
No 253
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.65 E-value=1.8e-16 Score=163.89 Aligned_cols=116 Identities=29% Similarity=0.339 Sum_probs=90.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHH-H--------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDM-M--------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~-~--------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++.. .+|..+|+|++..... .....+..+... + ..+|+||+++|+|..
T Consensus 6 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (325)
T cd05604 6 GSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFF 85 (325)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHH
Confidence 46789999875 4688999999864421 112223333222 1 137899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++.. ...+++.....++.++++||+||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 86 ~l~~-~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 86 HLQR-ERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred HHHH-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 7764 345888899999999999999999 678999999999999999999999999998753
No 254
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.65 E-value=7.2e-17 Score=152.14 Aligned_cols=194 Identities=23% Similarity=0.321 Sum_probs=140.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
..+|+||++-. ..|..+|+|.+.... ..+++..|+.+|. -+||||+.-||..+.++.
T Consensus 44 GSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~ 121 (502)
T KOG0574|consen 44 GSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRA 121 (502)
T ss_pred CcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHH
Confidence 34789998875 468999999986543 2334444444421 168999999999999988
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccccccc------
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNT------ 539 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~------ 539 (639)
.++.|.......|..+..+||+||| -..-+|||||+-||||..++.||++|||.|..+.+.........++
T Consensus 122 R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAP 198 (502)
T KOG0574|consen 122 RRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAP 198 (502)
T ss_pred hcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccH
Confidence 7888999988999999999999999 5567999999999999999999999999998886543221111111
Q ss_pred ---------cccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 540 ---------CHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 540 ---------~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
.++|+| | .|+.|+.+...- +..-++-.+-. .....+++....+-
T Consensus 199 EVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM--------------RAIFMIPT~PP----PTF~KPE~WS~~F~ 260 (502)
T KOG0574|consen 199 EVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM--------------RAIFMIPTKPP----PTFKKPEEWSSEFN 260 (502)
T ss_pred HHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc--------------ceeEeccCCCC----CCCCChHhhhhHHH
Confidence 268888 6 677777654211 10111111111 12334567778888
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+...+|+-..|++|-|+.+.++
T Consensus 261 DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 261 DFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred HHHHHHhcCCHHHHHHHHHHhh
Confidence 8999999999999999998875
No 255
>PLN03150 hypothetical protein; Provisional
Probab=99.65 E-value=5e-16 Score=172.37 Aligned_cols=148 Identities=28% Similarity=0.471 Sum_probs=125.2
Q ss_pred CChhHHHHHHHHHhcCCCCCCcccccCCCCCCCCc-----CccceecCCCC----CcEEEEEeCCCCCcccCCcCCCCCC
Q 041082 6 DNNHLSFQVFVLKGHVTDDPTNFLAKNWNTSSTVC-----HWTGVSCDVRS----YRVTTLNISGLSLTSTIPSELGNLS 76 (639)
Q Consensus 6 ~~~~~~~~ll~~k~~~~~~~~~~l~~~w~~~~~~c-----~w~gv~c~~~~----~~v~~L~L~~~~l~~~~p~~l~~l~ 76 (639)
+...+..||+.+|..+. ++.. .+ |.. ++| .|.||.|+... ..|+.|+|++++++|.+|..++.++
T Consensus 369 t~~~~~~aL~~~k~~~~-~~~~--~~-W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~ 442 (623)
T PLN03150 369 TLLEEVSALQTLKSSLG-LPLR--FG-WNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLR 442 (623)
T ss_pred cCchHHHHHHHHHHhcC-Cccc--CC-CCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCC
Confidence 34568899999999873 5432 24 964 455 69999996321 2589999999999999999999999
Q ss_pred CCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCC-CCCCEEec
Q 041082 77 SLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNL-SSLSDLDL 155 (639)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L 155 (639)
+|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|+.+++|++|+.|+|++|+++|.+|..+..+ .++..+++
T Consensus 443 ~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~ 522 (623)
T PLN03150 443 HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNF 522 (623)
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999988753 34455555
Q ss_pred CCCC
Q 041082 156 SHNN 159 (639)
Q Consensus 156 s~N~ 159 (639)
.+|.
T Consensus 523 ~~N~ 526 (623)
T PLN03150 523 TDNA 526 (623)
T ss_pred cCCc
Confidence 5543
No 256
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.65 E-value=2.8e-16 Score=162.25 Aligned_cols=116 Identities=25% Similarity=0.317 Sum_probs=91.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHH---------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMM---------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~ 461 (639)
+++|.||++... +|..+|+|.+..... .....+..|...+ ..+|+||+++|+|.+
T Consensus 11 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~ 90 (323)
T cd05615 11 GSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMY 90 (323)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHH
Confidence 468899998764 578999999864321 1122233333221 136899999999998
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++... ..+++.+...++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~i~~~-~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 91 HIQQV-GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence 87642 35899999999999999999999 678999999999999999999999999998754
No 257
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.65 E-value=3.4e-16 Score=152.76 Aligned_cols=206 Identities=25% Similarity=0.308 Sum_probs=129.1
Q ss_pred CcCcceEEEecC-CceeeeEEechhhhhhhhhHHHHHHH-------------------------HHhhhhhcCCCCCchh
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDM-------------------------MKKLVLEYMPHGSLEK 461 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~~~~~~f~~e~~~-------------------------~~~Lv~ey~~~gsL~~ 461 (639)
.||.||++.+.. +..+|||+.-..... +. .|.++ ...||+||||. +|+.
T Consensus 36 sFg~Vyq~~~~e~~~~vAIKKv~~d~r~--kn--rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~ 110 (364)
T KOG0658|consen 36 SFGVVYQAKLRETEEEVAIKKVLQDKRY--KN--RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYR 110 (364)
T ss_pred ccceEEEEEEcCCCceeEEEEecCCCCc--Cc--HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHH
Confidence 489999999754 589999986433211 11 11222 23489999998 8888
Q ss_pred cccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC-cceeeccccccccccccCCCcc---
Q 041082 462 CLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN-MVAHLSDFGMAKLLLKEDQSFT--- 534 (639)
Q Consensus 462 ~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~-~~~~i~dfgla~~~~~~~~~~~--- 534 (639)
.++. .+..++.....-++.|+.+||+||| ..+|+||||||.|+|+|.+ +..||||||=|+.+..+....+
T Consensus 111 ~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYic 187 (364)
T KOG0658|consen 111 VIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYIC 187 (364)
T ss_pred HHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEE
Confidence 7764 2234555445568899999999999 6899999999999999976 9999999999998876543211
Q ss_pred ------------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhh-CCCC---------cceeeecccc
Q 041082 535 ------------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDL-LPIS---------VMEVVDVNLL 583 (639)
Q Consensus 535 ------------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~-~~~~---------~~~~~d~~l~ 583 (639)
....+.+.||| | -|+.-... -+....|++.++.. .|.. -.+.-.|++.
T Consensus 188 SRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik 266 (364)
T KOG0658|consen 188 SRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIK 266 (364)
T ss_pred eccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccc
Confidence 11123378999 5 33321111 11122333333221 1211 1133334443
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+...... .........+++..+++..+|++|.+..|+++
T Consensus 267 ~~~~~~~-~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 267 AHPWHKV-FFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cccceee-cccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 3221000 01223345778899999999999999999885
No 258
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.65 E-value=4e-16 Score=152.43 Aligned_cols=116 Identities=32% Similarity=0.457 Sum_probs=88.5
Q ss_pred CcCcceEEEe-cCCceeeeEEechhhhh--hhhhHHHHHHHHHh---------------------------hhhhcCCCC
Q 041082 408 GFGSIYKARI-QDGMKVAVKVFDLQYER--AFKSFDVACDMMKK---------------------------LVLEYMPHG 457 (639)
Q Consensus 408 g~g~vy~~~l-~~g~~vavK~l~~~~~~--~~~~f~~e~~~~~~---------------------------Lv~ey~~~g 457 (639)
.+|.||+|.. ..|+.||+|++++.... .......|+.+++. +|+||+..
T Consensus 23 tyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~- 101 (323)
T KOG0594|consen 23 TYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR- 101 (323)
T ss_pred CceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-
Confidence 4789999985 56899999999887652 22222344433221 46677754
Q ss_pred CchhccccCC---ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 458 SLEKCLYSSN---YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 458 sL~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+|.+++.... ..++-.....+..|+.+|++|+| +.+|+||||||.|||+++++..|++|||+|+...
T Consensus 102 DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 102 DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 6666665422 34666678889999999999999 7889999999999999999999999999999665
No 259
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.65 E-value=1.3e-16 Score=148.75 Aligned_cols=162 Identities=29% Similarity=0.401 Sum_probs=110.5
Q ss_pred hhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
.+|+|.|+.|.|.++|.+ ...++.....+|..++..|++||| ...||||||||.|||+|+++++||+|||+|..+.
T Consensus 99 FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 99 FLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred hhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceeeccC
Confidence 489999999999999975 345777777889999999999999 8889999999999999999999999999999887
Q ss_pred ccCCC----ccc-c--ccccccccc-cCCCCCCCccCCCccchHHHHHhhC---------CCC------cceeeeccccc
Q 041082 528 KEDQS----FTQ-N--TNTCHHRIY-GTRRNPQMNFFSGEMTLKSWVNDLL---------PIS------VMEVVDVNLLS 584 (639)
Q Consensus 528 ~~~~~----~~~-~--~~~~~~dvy-Gtg~~p~~~~~~~~~~l~~~~~~~~---------~~~------~~~~~d~~l~~ 584 (639)
++..- ++. . .-+.++..| + .| .|+.+++ .|+-..+ |.- +..++ ..+
T Consensus 175 ~GekLrelCGTPgYLAPEtikC~m~e~---~p---GYs~EVD--~Wa~GVImyTLLaGcpPFwHRkQmlMLR~I---meG 243 (411)
T KOG0599|consen 175 PGEKLRELCGTPGYLAPETIKCSMYEN---HP---GYSKEVD--EWACGVIMYTLLAGCPPFWHRKQMLMLRMI---MEG 243 (411)
T ss_pred CchhHHHhcCCCcccChhheeeecccC---CC---Cccchhh--HHHHHHHHHHHHcCCCchhHHHHHHHHHHH---Hhc
Confidence 65421 000 0 011244444 1 01 1122222 2332211 110 11111 112
Q ss_pred cccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 585 MEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+....+.+.+....+.+++.+|++.+|.+|-|.+|+++.
T Consensus 244 kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 244 KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 2333344556667788899999999999999999999863
No 260
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.65 E-value=3.5e-16 Score=156.84 Aligned_cols=117 Identities=31% Similarity=0.453 Sum_probs=92.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhh---------hhhhHHHHHHHHH--------------------hhhhhcCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYER---------AFKSFDVACDMMK--------------------KLVLEYMPH 456 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~---------~~~~f~~e~~~~~--------------------~Lv~ey~~~ 456 (639)
.++|.+|++.. .++..+++|.+...... ....+..|+.+++ .+++||+++
T Consensus 11 g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (267)
T cd06628 11 GSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPG 90 (267)
T ss_pred CCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCC
Confidence 45788999875 35788999987543221 1234455555432 268899999
Q ss_pred CCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 457 GSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 457 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
++|.+++... ..+++.....++.+++.|++||| ..+++||||||+||++++++.++++|||+++...
T Consensus 91 ~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 91 GSVAALLNNY-GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred CCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 9999988643 45788889999999999999999 5679999999999999999999999999988765
No 261
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.65 E-value=4.6e-16 Score=149.29 Aligned_cols=120 Identities=25% Similarity=0.379 Sum_probs=94.8
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhh-hh-hHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERA-FK-SFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~-~~-~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
..+|.||++.- ..+..||+|++....... +. .-.+|+.++. ++|||||+. +|..
T Consensus 87 GtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLks 165 (419)
T KOG0663|consen 87 GTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKS 165 (419)
T ss_pred CcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHH
Confidence 34899999985 467899999998765321 11 1223444422 379999987 8888
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
+++.-...+.-.+..-+..|+.+|++||| ..-|+|||||++|+|+..++..||+|||+||.+++..
T Consensus 166 l~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 166 LMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred HHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 88764456777778889999999999999 5669999999999999999999999999999987653
No 262
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.65 E-value=5.6e-16 Score=163.31 Aligned_cols=116 Identities=28% Similarity=0.395 Sum_probs=88.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH-------------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK-------------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~-------------------------~Lv~ey~~~gs 458 (639)
.++|.||++.. .++..+|+|.+.... ....+.+..|+.+++ .+|+||+. ++
T Consensus 11 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 89 (372)
T cd07853 11 GAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SD 89 (372)
T ss_pred CCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cC
Confidence 46889999885 468899999875432 122334445554422 25677776 46
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
|.+.+.. ...+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 90 l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 90 LHKIIVS-PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 6666543 345889999999999999999999 6789999999999999999999999999998654
No 263
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.65 E-value=4e-16 Score=161.20 Aligned_cols=115 Identities=26% Similarity=0.353 Sum_probs=90.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHH-----------------------HhhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMM-----------------------KKLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~-----------------------~~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+|+|.+..... .....+..+...+ ..+|+||+++|+|
T Consensus 10 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L 89 (324)
T cd05589 10 GHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDL 89 (324)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcH
Confidence 467899998764 578999999864431 1122333333221 1378999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
...++. ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++..
T Consensus 90 ~~~~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 90 MMHIHT--DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred HHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 888764 35899999999999999999999 678999999999999999999999999998753
No 264
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.65 E-value=1e-15 Score=154.77 Aligned_cols=211 Identities=22% Similarity=0.258 Sum_probs=134.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
+++|.+|++... ++..+++|.+...... ....+..+++.++ .+|+||+++ ++.+.+
T Consensus 10 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l 88 (283)
T cd05118 10 GTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLI 88 (283)
T ss_pred CCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHH
Confidence 457889998864 6788999988654322 2334444544422 267889875 787777
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----------- 532 (639)
......+++.++..++.+++.|++||| ..+|+|+|||++||+++.++.++++|||.+.........
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~ 165 (283)
T cd05118 89 KDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYR 165 (283)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCccccc
Confidence 654457899999999999999999999 678999999999999999999999999998766543200
Q ss_pred ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCC----Ccceeee------cccccccc-
Q 041082 533 FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPI----SVMEVVD------VNLLSMED- 587 (639)
Q Consensus 533 ~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~----~~~~~~d------~~l~~~~~- 587 (639)
.+. ...+.++|+| | ||+.|.... +......-....... ...+..+ ........
T Consensus 166 ~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T cd05118 166 APELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGK--SEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGM 243 (283)
T ss_pred CcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcccccc
Confidence 000 1233478898 6 787765421 111111001011100 0000000 00000000
Q ss_pred ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 588 KYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 588 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
......++....+.+++..|++.+|.+||+|.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 244 PLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000111234567889999999999999999999975
No 265
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.65 E-value=3e-16 Score=156.30 Aligned_cols=194 Identities=23% Similarity=0.324 Sum_probs=130.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++... +|..+++|.+..... .....+..|+..++ .+|+||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 90 (257)
T cd08225 11 GSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRI 90 (257)
T ss_pred CCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHH
Confidence 467889998875 478899999865422 12234455555432 2689999999999988
Q ss_pred ccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc-ceeeccccccccccccCCCc--------
Q 041082 464 YSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-VAHLSDFGMAKLLLKEDQSF-------- 533 (639)
Q Consensus 464 ~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-~~~i~dfgla~~~~~~~~~~-------- 533 (639)
... ...++|..+..++.+++.|++||| ...++|+||||+||+++++. .+|++|||.+..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 167 (257)
T cd08225 91 NRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPY 167 (257)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCcc
Confidence 652 335899999999999999999999 66799999999999999874 57999999987664332110
Q ss_pred ---cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHH
Q 041082 534 ---TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCL 597 (639)
Q Consensus 534 ---~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 597 (639)
+. ...+.++|+| | +|+.|... ....+++.........+. . ....
T Consensus 168 ~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~-----~~~~~~~~~~~~~~~~~~-~--------------~~~~ 227 (257)
T cd08225 168 YLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG-----NNLHQLVLKICQGYFAPI-S--------------PNFS 227 (257)
T ss_pred ccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-----ccHHHHHHHHhcccCCCC-C--------------CCCC
Confidence 00 1112356777 5 56666431 222333332222111110 0 1112
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 598 SFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 598 ~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
..+.++..+|+..+|++||+|.||++
T Consensus 228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 228 RDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHhh
Confidence 34677888999999999999999975
No 266
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.64 E-value=3.6e-16 Score=156.37 Aligned_cols=195 Identities=23% Similarity=0.298 Sum_probs=127.8
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh-----hhhhhHHHHHHHHH--------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE-----RAFKSFDVACDMMK--------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~-----~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~ 460 (639)
.++|.+|++.. ..+..+++|.+..... .....+..|++.++ .+|+||+++++|.
T Consensus 13 g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 92 (263)
T cd06625 13 GAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVK 92 (263)
T ss_pred CCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHH
Confidence 35788998875 4578999998754321 12234555655533 2678999999999
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-------
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF------- 533 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~------- 533 (639)
+++... ..+++....+++.+++.|++||| ..+++||||||+||+++.++.++++|||+++.........
T Consensus 93 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 168 (263)
T cd06625 93 DQLKAY-GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVT 168 (263)
T ss_pred HHHHHh-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCC
Confidence 888642 35788888999999999999999 6689999999999999999999999999987553221100
Q ss_pred -------cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch
Q 041082 534 -------TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 534 -------~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
+. ...+.++||| | +|+.|..+. .......+. ...... + ..+
T Consensus 169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--~~~~~~~~~---~~~~~~----~----------~~~ 229 (263)
T cd06625 169 GTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF--EAMAAIFKI---ATQPTN----P----------QLP 229 (263)
T ss_pred cCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc--chHHHHHHH---hccCCC----C----------CCC
Confidence 00 0112356666 4 666554321 000000000 000000 0 011
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
......+.++..+|+..+|++||++.|+++.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 230 SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1223456778889999999999999999864
No 267
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.64 E-value=6.4e-16 Score=156.46 Aligned_cols=117 Identities=26% Similarity=0.386 Sum_probs=91.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++... .+..+++|.+..... .....+..|++.++ .+|+||+. ++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~ 89 (284)
T cd07860 11 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFM 89 (284)
T ss_pred CCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHH
Confidence 467889999764 578999998865432 12234555665533 26789995 5788877
Q ss_pred cc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 464 YS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 464 ~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
.. ....+++....+++.++++|++||| ..+++||||||+||+++.++.+|++|||+++...
T Consensus 90 ~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~ 151 (284)
T cd07860 90 DASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151 (284)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence 64 2346899999999999999999999 6689999999999999999999999999987654
No 268
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.64 E-value=3.6e-16 Score=161.31 Aligned_cols=116 Identities=30% Similarity=0.334 Sum_probs=88.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHH-HH--------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACD-MM--------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~-~~--------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... ++..+|+|++..... .....+..+.. .+ ..+|+||+++|+|..
T Consensus 6 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 85 (321)
T cd05603 6 GSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFF 85 (321)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHH
Confidence 468899999864 578999999864321 11122222222 11 137899999999988
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
++... ..++......++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 86 ~l~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 86 HLQRE-RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 77542 34677778889999999999999 678999999999999999999999999998753
No 269
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.64 E-value=3.7e-16 Score=158.11 Aligned_cols=212 Identities=24% Similarity=0.250 Sum_probs=131.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
+++|.+|++... +|..+++|++..... .....+..|++.++ .+++||++ ++|.+++
T Consensus 10 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~ 88 (283)
T cd07835 10 GTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYM 88 (283)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHH
Confidence 457889998864 689999998865432 12234555555532 26789985 6888887
Q ss_pred ccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC----------
Q 041082 464 YSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---------- 532 (639)
Q Consensus 464 ~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---------- 532 (639)
.... ..+++..+.+++.++++||+||| ..+++||||+|+||+++.++.++++|||+++........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 165 (283)
T cd07835 89 DSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWY 165 (283)
T ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCC
Confidence 6532 46899999999999999999999 668999999999999999999999999998765321110
Q ss_pred -ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhC-CCC-c----ceeeecc--cc-ccccc
Q 041082 533 -FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLL-PIS-V----MEVVDVN--LL-SMEDK 588 (639)
Q Consensus 533 -~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~-~~~-~----~~~~d~~--l~-~~~~~ 588 (639)
.+. ...+.++|+| | ||+.|.... .....+...++... +.. . ...-+.. .. .....
T Consensus 166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (283)
T cd07835 166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD-SEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQD 244 (283)
T ss_pred CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccc
Confidence 011 0113368888 7 787775421 01111111111100 100 0 0000000 00 00000
Q ss_pred cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 589 ~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...........+.+++.+|++.+|++||+|.||++
T Consensus 245 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 245 LSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000111245778999999999999999999975
No 270
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.64 E-value=1e-15 Score=157.00 Aligned_cols=195 Identities=22% Similarity=0.319 Sum_probs=129.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.+|++... ++..+++|.+.... ......+..+++.++ .+|+||+. |++.+.
T Consensus 26 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~ 104 (308)
T cd06634 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDL 104 (308)
T ss_pred CCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHH
Confidence 467889999864 57889999876432 122334555555532 26889996 678777
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------ccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------FTQ 535 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------~~~ 535 (639)
+......+++.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||++......... .+.
T Consensus 105 ~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE 181 (308)
T cd06634 105 LEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPE 181 (308)
T ss_pred HHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHH
Confidence 6544456899999999999999999999 668999999999999999999999999998865433211 000
Q ss_pred -------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 536 -------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 536 -------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
...+.++||| | ||+.|..+.- ....+..+..... +... .......
T Consensus 182 ~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~~~---------~~~~---------~~~~~~~ 242 (308)
T cd06634 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-AMSALYHIAQNES---------PALQ---------SGHWSEY 242 (308)
T ss_pred HHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc-HHHHHHHHhhcCC---------CCcC---------cccccHH
Confidence 1123367887 6 6776653210 0000111111000 0000 0122344
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+.+++.+|++.+|++||++.+|++.
T Consensus 243 ~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 243 FRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HHHHHHHHhhCCcccCCCHHHHhhC
Confidence 6778889999999999999998864
No 271
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.64 E-value=4.2e-18 Score=147.98 Aligned_cols=164 Identities=33% Similarity=0.488 Sum_probs=126.6
Q ss_pred CCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCC
Q 041082 72 LGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLS 151 (639)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 151 (639)
+-++.+.+.|-||+|.++ .+|..+..+.+|+.|++++|++. .+|.++++|+.|+.|+++-|++. +.|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 446778888899999998 67888899999999999999886 57888899999999999999886 7788888888888
Q ss_pred EEecCCCCCCCCCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCCCCCCCC
Q 041082 152 DLDLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTP 231 (639)
Q Consensus 152 ~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 231 (639)
.|||.+|++.. ..+|..|+.++.|+-|+|++|.|.- +|..++++++|+.|.+.+|.+-.
T Consensus 106 vldltynnl~e-----------------~~lpgnff~m~tlralyl~dndfe~-lp~dvg~lt~lqil~lrdndll~--- 164 (264)
T KOG0617|consen 106 VLDLTYNNLNE-----------------NSLPGNFFYMTTLRALYLGDNDFEI-LPPDVGKLTNLQILSLRDNDLLS--- 164 (264)
T ss_pred hhhcccccccc-----------------ccCCcchhHHHHHHHHHhcCCCccc-CChhhhhhcceeEEeeccCchhh---
Confidence 88887777654 2567778888888888888888854 45568888888888888776643
Q ss_pred cchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCccccccc
Q 041082 232 ELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITL 294 (639)
Q Consensus 232 ~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 294 (639)
+|.+++.++.|++|.+.+|+++ .+|..+
T Consensus 165 ----------------------------------lpkeig~lt~lrelhiqgnrl~-vlppel 192 (264)
T KOG0617|consen 165 ----------------------------------LPKEIGDLTRLRELHIQGNRLT-VLPPEL 192 (264)
T ss_pred ----------------------------------CcHHHHHHHHHHHHhcccceee-ecChhh
Confidence 3555666666777777777766 334333
No 272
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.64 E-value=1.3e-16 Score=159.13 Aligned_cols=116 Identities=38% Similarity=0.528 Sum_probs=92.3
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhhhhh--hHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFK--SFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~~~~--~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++.... +..+|+|.++........ ....|...++ .+|+||+++++|.+++
T Consensus 10 G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l 89 (260)
T PF00069_consen 10 GGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYL 89 (260)
T ss_dssp ESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHH
T ss_pred CCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 4688999998765 568999999766433221 1122444432 2689999999999988
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
. ....+++..+..++.++++||+||| +.+++|+||||.||+++.+++++++|||.+...
T Consensus 90 ~-~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 90 Q-KNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKL 148 (260)
T ss_dssp H-HHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred c-ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 7 2345899999999999999999999 568999999999999999999999999998753
No 273
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.64 E-value=4.9e-16 Score=157.97 Aligned_cols=116 Identities=27% Similarity=0.414 Sum_probs=91.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... ++..+++|.+...... ....+..|+++++ .+|+||+++ +|.+++.
T Consensus 16 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~ 94 (291)
T cd07844 16 GSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMD 94 (291)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHH
Confidence 457889999865 6789999998654321 1223445655543 278999984 8988886
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.....+++.....++.+++.||+||| ..+++||||||+||+++.++.+|++|||+++..
T Consensus 95 ~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 95 DCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECcccccccc
Confidence 54456889999999999999999999 668999999999999999999999999998754
No 274
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.63 E-value=7.4e-16 Score=160.19 Aligned_cols=209 Identities=22% Similarity=0.284 Sum_probs=129.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH-----------------------hhhhhcCCCCCch
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK-----------------------KLVLEYMPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~-----------------------~Lv~ey~~~gsL~ 460 (639)
+++|.+|++... .+..+++|++.... ......+..|+..++ .+|+||++ ++|.
T Consensus 18 g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~ 96 (337)
T cd07852 18 GAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLH 96 (337)
T ss_pred CCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHH
Confidence 467889999865 57889999874321 111222333333321 36788887 5887
Q ss_pred hccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--------
Q 041082 461 KCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------- 532 (639)
Q Consensus 461 ~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------- 532 (639)
.++... .++|..+..++.++|.||+||| ..+|+||||||+||+++.++.+|++|||+++........
T Consensus 97 ~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~ 171 (337)
T cd07852 97 AVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTD 171 (337)
T ss_pred HHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhc
Confidence 777543 6899999999999999999999 678999999999999999999999999999865432210
Q ss_pred --------ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCC------------Ccceee
Q 041082 533 --------FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPI------------SVMEVV 578 (639)
Q Consensus 533 --------~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~------------~~~~~~ 578 (639)
.+. ...+.++|+| | ||+.|...... ......+....+. ...+++
T Consensus 172 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (337)
T cd07852 172 YVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTST--LNQLEKIIEVIGPPSAEDIESIKSPFAATML 249 (337)
T ss_pred ccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHHHhhhHHHhh
Confidence 000 1122368888 6 88877642110 0000000000000 000111
Q ss_pred eccccccccc-cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 579 DVNLLSMEDK-YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 579 d~~l~~~~~~-~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+ .+...... .....++....+.+++..|++.+|++||++.++++.
T Consensus 250 ~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 250 D-SLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred h-hcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 1 00000000 000011134567889999999999999999999964
No 275
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.63 E-value=8.6e-16 Score=156.16 Aligned_cols=116 Identities=27% Similarity=0.395 Sum_probs=88.4
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhh-hhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERA-FKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~-~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++.. ..+..+++|.+....... ...+..|+..++ .+|+||+. +++...+.
T Consensus 16 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~ 94 (291)
T cd07870 16 GSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMI 94 (291)
T ss_pred cCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHH
Confidence 45788999875 457899999986543221 123444554432 26889996 67766655
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.....+.+.+...++.+++.||+||| ..+++||||||+||+++.+++++++|||+++..
T Consensus 95 ~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 153 (291)
T cd07870 95 QHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAK 153 (291)
T ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEecccccccc
Confidence 43345788888899999999999999 567999999999999999999999999998754
No 276
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.63 E-value=9.1e-16 Score=157.35 Aligned_cols=213 Identities=21% Similarity=0.218 Sum_probs=133.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.||++... .+..+++|.+..... .....+..|++.++ .+|+||+++|+|.+++.
T Consensus 12 G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~ 91 (308)
T cd06615 12 GNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 91 (308)
T ss_pred CCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHH
Confidence 457889998754 577888888764322 22234555665533 26899999999999987
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---------cc-
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---------FT- 534 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---------~~- 534 (639)
.. ..+++.....++.++++||+|||+ ..+++||||||.||+++.++.++++|||+++........ .+
T Consensus 92 ~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE 168 (308)
T cd06615 92 KA-GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE 168 (308)
T ss_pred hc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChh
Confidence 53 457888889999999999999995 247999999999999999999999999998765332110 00
Q ss_pred ---ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC-cceeee-cccccccc-------------
Q 041082 535 ---QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS-VMEVVD-VNLLSMED------------- 587 (639)
Q Consensus 535 ---~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~-~~~~~d-~~l~~~~~------------- 587 (639)
....+.++|+| | ||+.|.... +...+..+........ ...... +.......
T Consensus 169 ~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (308)
T cd06615 169 RLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP--DAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYI 246 (308)
T ss_pred HhcCCCCCccchHHHHHHHHHHHHhCCCCCCCc--chhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHH
Confidence 01123378898 6 888876421 1111111111100000 000000 00000000
Q ss_pred ---ccccch-HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 588 ---KYFTTK-KQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 588 ---~~~~~~-~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.....+ ......+.+++.+|+..+|++||++.||++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 247 VNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred hcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 0122357789999999999999999999875
No 277
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.63 E-value=9.4e-16 Score=155.34 Aligned_cols=211 Identities=25% Similarity=0.283 Sum_probs=134.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
+++|.+|++... .+..+++|.+.... ......+..|+..++ .+|+||+++ +|.+
T Consensus 10 g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 88 (287)
T cd07840 10 GTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTG 88 (287)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHH
Confidence 467899999876 47899999987653 222234444544421 267889874 8888
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC---C------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ---S------ 532 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~---~------ 532 (639)
++......+++..+..++.++++|++||| ..+++|+||||+||++++++.+|++|||++........ .
T Consensus 89 ~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 165 (287)
T cd07840 89 LLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITL 165 (287)
T ss_pred HHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccccccccc
Confidence 77654457899999999999999999999 56799999999999999999999999999986654320 0
Q ss_pred ---ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCC----CCcceeee----cccccccc
Q 041082 533 ---FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLP----ISVMEVVD----VNLLSMED 587 (639)
Q Consensus 533 ---~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~----~~~~~~~d----~~l~~~~~ 587 (639)
.+. ...+.++||| | ||+.|....- .......+..... ....+..+ ........
T Consensus 166 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T cd07840 166 WYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST--ELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKP 243 (287)
T ss_pred ccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCchhhccccccchhhhhcccccc
Confidence 001 1123478888 6 7887765321 1111111111110 00000000 00000000
Q ss_pred --c-cccchHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 588 --K-YFTTKKQ-CLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 588 --~-~~~~~~~-~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
. ..+.... +...+.+++.+|+..+|++||++.+|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 244 YKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0 0000011 2457889999999999999999999986
No 278
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.63 E-value=1.2e-15 Score=154.14 Aligned_cols=208 Identities=18% Similarity=0.181 Sum_probs=130.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhh-hhhHHHHHHHH-----------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERA-FKSFDVACDMM-----------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~-~~~f~~e~~~~-----------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.+|++.. .++..+|+|.+....... ......+...+ ..+|+||++ |++.+
T Consensus 10 g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~ 88 (282)
T cd07831 10 GTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYE 88 (282)
T ss_pred cccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHH
Confidence 45788999875 467899999876432111 11111222221 126788886 57777
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--------- 532 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--------- 532 (639)
.+......++|.++..++.++++||+||| ..+++||||||+||+++. +.+||+|||+++.+......
T Consensus 89 ~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y 164 (282)
T cd07831 89 LIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWY 164 (282)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCccc
Confidence 77654456899999999999999999999 668999999999999999 99999999999866432210
Q ss_pred -ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC------------cceeeecccccc
Q 041082 533 -FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS------------VMEVVDVNLLSM 585 (639)
Q Consensus 533 -~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~------------~~~~~d~~l~~~ 585 (639)
.+. ...+.++|+| | +|+.|.... +......+........ ......+.....
T Consensus 165 ~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (282)
T cd07831 165 RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT--NELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGT 242 (282)
T ss_pred CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC--CHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccc
Confidence 011 1123478888 6 777776431 1222223322222111 000000000000
Q ss_pred ccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 586 EDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 586 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
. ...........+.+++.+|++.+|++||++.++++
T Consensus 243 ~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 243 G--LRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred c--HHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0 00001233567889999999999999999999975
No 279
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.63 E-value=2.8e-15 Score=154.14 Aligned_cols=114 Identities=26% Similarity=0.241 Sum_probs=87.8
Q ss_pred CcceEEEe-cCCceeeeEEechh--hhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 410 GSIYKARI-QDGMKVAVKVFDLQ--YERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 410 g~vy~~~l-~~g~~vavK~l~~~--~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
+.+|.+.- ..+..+|+|++... .......+..|+..++ .+++||+++|++.+++...
T Consensus 14 ~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~ 93 (314)
T cd08216 14 MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTH 93 (314)
T ss_pred ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHh
Confidence 34444432 36889999998654 2223345556655532 2678999999999988752
Q ss_pred -CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 467 -NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 467 -~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
...+++.....++.++++||+||| ..+|+|||||++||+++.++.++++|||.+..+
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 94 FPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceee
Confidence 345788888999999999999999 668999999999999999999999999988654
No 280
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.63 E-value=5.7e-16 Score=156.95 Aligned_cols=118 Identities=24% Similarity=0.316 Sum_probs=93.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+...... ....+..|+.+++ .+|+||+++|+|.++
T Consensus 11 G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 90 (285)
T cd05630 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 90 (285)
T ss_pred CCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHH
Confidence 468899988764 5789999988643221 1223444555432 268999999999988
Q ss_pred ccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+.. ....+++.++..++.+++.|++||| ..+|+||||||+||+++.++.++++|||++....
T Consensus 91 l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 91 IYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 854 2345889999999999999999999 7789999999999999999999999999987654
No 281
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.63 E-value=1.7e-15 Score=155.18 Aligned_cols=115 Identities=29% Similarity=0.427 Sum_probs=92.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.+|++... .+..+++|.+..... .....+..|.+.++ .+|+||+++|+|.++
T Consensus 12 g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (305)
T cd05609 12 GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATL 91 (305)
T ss_pred CCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHH
Confidence 467889988764 467899998865432 12234445554432 378999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+... ..+++.....++.+++.|++|+| ..+++||||||.||+++.++.++++|||+++.
T Consensus 92 l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 92 LKNI-GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKI 150 (305)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccc
Confidence 8653 35889888999999999999999 66899999999999999999999999999874
No 282
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.63 E-value=1.2e-15 Score=159.93 Aligned_cols=115 Identities=26% Similarity=0.290 Sum_probs=85.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------------~Lv~ey~~~g 457 (639)
.++|.||++.- ..+..+|+|.+..... .....+..|+..++ .+|+||+++
T Consensus 28 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 106 (355)
T cd07874 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA- 106 (355)
T ss_pred cCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-
Confidence 56889998875 3578899998864321 12223333443322 367788864
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
++.+.+. ..+++.+...++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 107 ~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 107 NLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred cHHHHHh---hcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 5555543 24788888999999999999999 67899999999999999999999999999986543
No 283
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.62 E-value=2.4e-15 Score=152.63 Aligned_cols=209 Identities=22% Similarity=0.210 Sum_probs=127.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHH----------------------------HhhhhhcCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMM----------------------------KKLVLEYMP 455 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~----------------------------~~Lv~ey~~ 455 (639)
.++|.||++... .+..+|+|.+...... ....+..|...+ ..+++||++
T Consensus 11 g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~ 90 (288)
T cd07863 11 GAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD 90 (288)
T ss_pred cCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc
Confidence 467899999764 5789999988653211 111222232221 136778887
Q ss_pred CCCchhccccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--
Q 041082 456 HGSLEKCLYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-- 532 (639)
Q Consensus 456 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-- 532 (639)
+++.+++... ...+++.....++.+++.||+|+| +.+|+||||||+||+++.++.+|++|||+++........
T Consensus 91 -~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 166 (288)
T cd07863 91 -QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTP 166 (288)
T ss_pred -cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCC
Confidence 4777777542 234889999999999999999999 667999999999999999999999999999876432211
Q ss_pred --------ccc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhh-CCCC--c-------ceeeecc
Q 041082 533 --------FTQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDL-LPIS--V-------MEVVDVN 581 (639)
Q Consensus 533 --------~~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~-~~~~--~-------~~~~d~~ 581 (639)
.+. ...+.++|+| | +|+.|..... ....+....... .+.. . ...+.+.
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (288)
T cd07863 167 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPR 245 (288)
T ss_pred ccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC-HHHHHHHHHHHhCCCChhhCcccccccccccCCC
Confidence 000 1123378888 6 6776653211 111111111110 0000 0 0001110
Q ss_pred ccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 582 LLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 582 l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
..... ....++....+.+++.+|++.+|++|||+.|++.
T Consensus 246 ~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 246 GPRPV---QSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCCch---HHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 0001122345678899999999999999999875
No 284
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.62 E-value=1.2e-15 Score=155.47 Aligned_cols=198 Identities=21% Similarity=0.253 Sum_probs=124.9
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhh-hhhhHHHHHHHH---------------------HhhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYER-AFKSFDVACDMM---------------------KKLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~-~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~~l 463 (639)
+++|.+|++.... +..+|+|.+...... ....+..+...+ ..+++||+++ ++.+..
T Consensus 26 g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~ 104 (296)
T cd06618 26 GTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKLL 104 (296)
T ss_pred cCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHHH
Confidence 3578899998865 889999998643211 112222232221 1257788753 565555
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC----------c
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----------F 533 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----------~ 533 (639)
......+++..+..++.++++|++|||. ..+|+||||+|+||++++++.+||+|||++..+...... .
T Consensus 105 ~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~a 182 (296)
T cd06618 105 KRIQGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMA 182 (296)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccC
Confidence 4333468999999999999999999994 247999999999999999999999999998765422110 0
Q ss_pred cc--------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 534 TQ--------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 534 ~~--------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
+. ...+.++|+| | +|+.|....- .. .+............ +. ....+
T Consensus 183 PE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~---~~~~~~~~~~~~~~-----~~--------~~~~~ 245 (296)
T cd06618 183 PERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK-TE---FEVLTKILQEEPPS-----LP--------PNEGF 245 (296)
T ss_pred HhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch-hH---HHHHHHHhcCCCCC-----CC--------CCCCC
Confidence 00 0122367777 6 7777754210 00 11111111111000 00 00112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
...+.+++.+|++.+|++||++.+|++.
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 3457788899999999999999999864
No 285
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.62 E-value=7.9e-16 Score=156.60 Aligned_cols=118 Identities=25% Similarity=0.357 Sum_probs=91.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+++|.+...... ....+..|+..++ .+|+||++ ++|.+
T Consensus 16 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~ 94 (293)
T cd07843 16 GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKS 94 (293)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHH
Confidence 457889999875 5788999988654322 1123334444322 36788987 48888
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
.+......+++.....++.+++.||+||| ..+++||||||+||+++.++.++++|||+++....
T Consensus 95 ~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 95 LMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 77654456899999999999999999999 56799999999999999999999999999886644
No 286
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.62 E-value=4.1e-15 Score=154.06 Aligned_cols=118 Identities=26% Similarity=0.335 Sum_probs=93.7
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..|...++ .+|+||+++|+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~ 91 (331)
T cd05597 12 GAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTL 91 (331)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHH
Confidence 468899998864 578999999864221 12233445544422 378999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+......++......++.+++.||+||| ..+|+||||||.||+++.++.+|++|||+++.+.
T Consensus 92 l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 92 LSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 8654456888888999999999999999 6789999999999999999999999999987654
No 287
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.62 E-value=8.5e-16 Score=156.78 Aligned_cols=193 Identities=24% Similarity=0.316 Sum_probs=129.3
Q ss_pred cCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhccc
Q 041082 409 FGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 409 ~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l~ 464 (639)
||.++...- .++..+++|.+++... ........|+...+ .+||+|+++|++++.+.
T Consensus 17 fG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~ 96 (426)
T KOG0589|consen 17 FGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIK 96 (426)
T ss_pred cchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHH
Confidence 565554332 2467899999876542 22223334444432 36899999999999987
Q ss_pred cCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcccccccc---
Q 041082 465 SSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTC--- 540 (639)
Q Consensus 465 ~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~--- 540 (639)
... ..++..+..++..++..|+.||| ...|+|||||+.||++..+..+|++|||+|+.+.+........++|.
T Consensus 97 ~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~Ym 173 (426)
T KOG0589|consen 97 EQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYM 173 (426)
T ss_pred HHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCccc
Confidence 644 56788889999999999999999 77899999999999999999999999999999987752211122222
Q ss_pred ------------ccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 541 ------------HHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 541 ------------~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
|+|+| | +-++++. +.++...+....+. .++| .+......
T Consensus 174 cPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~-----a~~m~~Li~ki~~~----~~~P-----------lp~~ys~e 233 (426)
T KOG0589|consen 174 CPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFK-----ASNMSELILKINRG----LYSP-----------LPSMYSSE 233 (426)
T ss_pred CHHHhCCCCCCccCcchhhcchHHHHHhcccccC-----ccchHHHHHHHhhc----cCCC-----------CCccccHH
Confidence 55555 4 2222221 12222222222111 1111 12233445
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+-.++-.|+..+|+.||++.+++.+
T Consensus 234 l~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 234 LRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHHHhhcCCccCCCHHHHhhC
Confidence 6667779999999999999999987
No 288
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.62 E-value=1.3e-15 Score=152.69 Aligned_cols=196 Identities=19% Similarity=0.205 Sum_probs=129.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHH----------------HHhhhhhcCCCCCchhccccCCcc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDM----------------MKKLVLEYMPHGSLEKCLYSSNYI 469 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~----------------~~~Lv~ey~~~gsL~~~l~~~~~~ 469 (639)
.++|.||++.. ..+..+++|...............+... ...+|+||+++|+|.+++.... .
T Consensus 27 g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~ 105 (267)
T PHA03390 27 GKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG-K 105 (267)
T ss_pred CCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC-C
Confidence 45788998875 4577888988764322211111111100 1237899999999999887543 7
Q ss_pred CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc-ceeeccccccccccccCCC-c------cc----cc
Q 041082 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-VAHLSDFGMAKLLLKEDQS-F------TQ----NT 537 (639)
Q Consensus 470 l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-~~~i~dfgla~~~~~~~~~-~------~~----~~ 537 (639)
++|.+...++.++++|++||| ..+++||||||+||+++.++ .++++|||+++........ . +. ..
T Consensus 106 l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~ 182 (267)
T PHA03390 106 LSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHN 182 (267)
T ss_pred CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCCC
Confidence 899999999999999999999 66799999999999999988 9999999998765433211 0 00 11
Q ss_pred cccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHHHHhhcc
Q 041082 538 NTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECT 608 (639)
Q Consensus 538 ~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~ 608 (639)
.+.++||| | ||+.|.............|.... ... .. .....-..+.++..+|+
T Consensus 183 ~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~-~~---------------~~~~~~~~~~~li~~~l 245 (267)
T PHA03390 183 YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK-LP---------------FIKNVSKNANDFVQSML 245 (267)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc-CC---------------cccccCHHHHHHHHHHh
Confidence 23367888 6 78877764333333333443221 110 00 01112234667788999
Q ss_pred CCCCCCCCC-HHHHHH
Q 041082 609 AESPKQRIN-AKESVT 623 (639)
Q Consensus 609 ~~~p~~RP~-m~~v~~ 623 (639)
+.+|.+||+ +.|+++
T Consensus 246 ~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 246 KYNINYRLTNYNEIIK 261 (267)
T ss_pred ccChhhCCchHHHHhc
Confidence 999999996 688764
No 289
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.62 E-value=2.4e-15 Score=150.74 Aligned_cols=206 Identities=26% Similarity=0.337 Sum_probs=127.1
Q ss_pred cCcceEEEe-cCCceeeeEEechhhhhh--------------hhhHHHHHHHHHh----------------------hhh
Q 041082 409 FGSIYKARI-QDGMKVAVKVFDLQYERA--------------FKSFDVACDMMKK----------------------LVL 451 (639)
Q Consensus 409 ~g~vy~~~l-~~g~~vavK~l~~~~~~~--------------~~~f~~e~~~~~~----------------------Lv~ 451 (639)
+|.|-++.- .++..+|+|+++...... ......|+.+++. ||.
T Consensus 110 yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVl 189 (576)
T KOG0585|consen 110 YGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVL 189 (576)
T ss_pred cceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEE
Confidence 667776663 468999999986533211 1245566666654 688
Q ss_pred hcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC
Q 041082 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ 531 (639)
Q Consensus 452 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~ 531 (639)
||+..|.+.+.= .....++..+..++..++..||+||| ..+|+||||||+|+|+++++.+||+|||.+........
T Consensus 190 ey~s~G~v~w~p-~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~ 265 (576)
T KOG0585|consen 190 EYCSKGEVKWCP-PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSD 265 (576)
T ss_pred EeccCCccccCC-CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcEEeeccceeeecccCCc
Confidence 999988775432 12222888889999999999999999 67899999999999999999999999999886633221
Q ss_pred C-----cccccccc----ccccc-cCCC---CCCCccCCCccchHHHHHhhCCCC---cc----eeeecccccccccccc
Q 041082 532 S-----FTQNTNTC----HHRIY-GTRR---NPQMNFFSGEMTLKSWVNDLLPIS---VM----EVVDVNLLSMEDKYFT 591 (639)
Q Consensus 532 ~-----~~~~~~~~----~~dvy-Gtg~---~p~~~~~~~~~~l~~~~~~~~~~~---~~----~~~d~~l~~~~~~~~~ 591 (639)
+ ....++|. ..-.+ |.+. .-.-|+|+-|+.|--++....|.. .. .++...+.- .
T Consensus 266 ~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~f------P 339 (576)
T KOG0585|consen 266 EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEF------P 339 (576)
T ss_pred cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccC------C
Confidence 1 01111221 00000 0000 001123444455544444444431 11 222222211 1
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 592 TKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 592 ~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
..++....+-+|+.+-+..+|.+|.+..+|...
T Consensus 340 ~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 340 ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred CcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 112344556677778888999999999998754
No 290
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.62 E-value=3.3e-15 Score=153.78 Aligned_cols=118 Identities=31% Similarity=0.362 Sum_probs=94.4
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhh---hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYER---AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~---~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.||++.... +..+++|.+...... ..+.+..+.+.++ .+|+||+.+++|.++
T Consensus 12 g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (316)
T cd05574 12 GDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRL 91 (316)
T ss_pred CccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHH
Confidence 4578899998764 789999988654321 2334555554432 368999999999998
Q ss_pred cccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+... ...+++.....++.++++||+||| ..+++||||||+||+++.++.++++|||++....
T Consensus 92 ~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 92 LQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred HHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 8652 346899999999999999999999 6789999999999999999999999999987654
No 291
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.62 E-value=3.3e-15 Score=150.23 Aligned_cols=195 Identities=22% Similarity=0.279 Sum_probs=129.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHH---------------------------HhhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMM---------------------------KKLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~---------------------------~~Lv~ey~~~gs 458 (639)
.++|.+|++... .+..+++|.+...... ...+..|+... ..+|+||+++++
T Consensus 17 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 95 (275)
T cd06608 17 GTYGKVYKARHKKTGQLVAIKIMDIIEDE-EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGS 95 (275)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEecCchh-HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCc
Confidence 457789998874 5678999988654332 23455554432 136889999999
Q ss_pred chhccccC---CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc--
Q 041082 459 LEKCLYSS---NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-- 533 (639)
Q Consensus 459 L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-- 533 (639)
|.+++... ...+++..+..++.+++.||+||| +.+++||||+++||++++++.++++|||++..........
T Consensus 96 L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 172 (275)
T cd06608 96 VTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNT 172 (275)
T ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcC
Confidence 98887642 356899999999999999999999 6789999999999999999999999999987543221100
Q ss_pred ---------cc---------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccc
Q 041082 534 ---------TQ---------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSME 586 (639)
Q Consensus 534 ---------~~---------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~ 586 (639)
+. ...+.++||| | ||+.|..+.. ....+.... .. ..+.+
T Consensus 173 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~----~~-----~~~~~---- 238 (275)
T cd06608 173 FIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH-PMRALFKIP----RN-----PPPTL---- 238 (275)
T ss_pred ccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc-hHHHHHHhh----cc-----CCCCC----
Confidence 00 0012256777 5 6666654210 011111100 00 00011
Q ss_pred cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 587 DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 587 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.........+.+++.+|+..+|++|||+.|+++
T Consensus 239 ----~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 239 ----KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 011223446778899999999999999999986
No 292
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.62 E-value=1.3e-15 Score=149.87 Aligned_cols=195 Identities=26% Similarity=0.291 Sum_probs=133.1
Q ss_pred CcCcceEEEecC-CceeeeEEechhhhhh-hhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYERA-FKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~~~-~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
++|.+|++...+ +..+++|++....... .+.+..+++..+ .+++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 468899999864 8899999987654433 456666665532 268899999999998865
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC----c------c-
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----F------T- 534 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----~------~- 534 (639)
.. .+++.++..++.+++++++||| ..+++|+||+++||+++.++.++++|||.+......... . +
T Consensus 81 ~~-~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE 156 (244)
T smart00220 81 RG-RLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPE 156 (244)
T ss_pred cc-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHH
Confidence 32 2889999999999999999999 668999999999999999999999999999876543110 0 0
Q ss_pred ---ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHHH
Q 041082 535 ---QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVFN 602 (639)
Q Consensus 535 ---~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~ 602 (639)
....+.+.|+| | +|..|.... .....+.++....... .. .........+.+
T Consensus 157 ~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~-~~~~~~~~~~~~~~~~----~~------------~~~~~~~~~~~~ 219 (244)
T smart00220 157 VLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD-DQLLELFKKIGKPKPP----FP------------PPEWKISPEAKD 219 (244)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHhccCCC----Cc------------cccccCCHHHHH
Confidence 01112367777 5 565554321 1111111211110000 00 000003346788
Q ss_pred HHhhccCCCCCCCCCHHHHHH
Q 041082 603 LAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 603 l~~~C~~~~p~~RP~m~~v~~ 623 (639)
++.+|+..+|++||++.++++
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHccCCchhccCHHHHhh
Confidence 999999999999999999986
No 293
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.62 E-value=2.3e-15 Score=149.71 Aligned_cols=194 Identities=23% Similarity=0.293 Sum_probs=128.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.+++.+|++.. .++..+++|.+..... .....+..+++.++ .+|+||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (256)
T cd08530 11 GSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAI 90 (256)
T ss_pred CCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHH
Confidence 35678998764 4678899998865431 11233334444322 3689999999999887
Q ss_pred cc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc------
Q 041082 464 YS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT------ 534 (639)
Q Consensus 464 ~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~------ 534 (639)
.. ....+++.....++.++++|++||| ..+++||||++.||+++.++.+|++|||+++..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~ 167 (256)
T cd08530 91 SKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHY 167 (256)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccc
Confidence 65 2345899999999999999999999 67899999999999999999999999999987654321100
Q ss_pred -------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 535 -------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 535 -------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
....+.++|+| | +|+.|.... +..+...... ... . .+.......
T Consensus 168 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~-----~~~~~~~~~~-~~~--------~------~~~~~~~~~ 227 (256)
T cd08530 168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEAR-----SMQDLRYKVQ-RGK--------Y------PPIPPIYSQ 227 (256)
T ss_pred cCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHh-cCC--------C------CCCchhhCH
Confidence 00112256666 4 566554321 1111110000 000 0 011123345
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.+.+++.+|++.+|++||++.|+++
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 228 DLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHhc
Confidence 6788999999999999999999975
No 294
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.62 E-value=1.1e-15 Score=151.83 Aligned_cols=193 Identities=25% Similarity=0.337 Sum_probs=130.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++... .+..+++|.+..... .....+..+++.+. .+++||+++++|.+++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 90 (254)
T cd06627 11 GAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQII 90 (254)
T ss_pred cCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHH
Confidence 357889998764 578899998865543 23345666665532 2678999999999888
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF---------- 533 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~---------- 533 (639)
... ..++|..+..++.+++.|+.||| ..+++||||||+||+++.++.++++|||+++.........
T Consensus 91 ~~~-~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~ 166 (254)
T cd06627 91 KKF-GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWM 166 (254)
T ss_pred Hhc-cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhc
Confidence 643 46899999999999999999999 6689999999999999999999999999998765433210
Q ss_pred -cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 534 -TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 534 -~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
+. ...+.+.||| | +|+.|..+. .......... ... ...+ +......
T Consensus 167 ~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~----~~~~~~~~~~-~~~-~~~~--------------~~~~~~~ 226 (254)
T cd06627 167 APEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDL----NPMAALFRIV-QDD-HPPL--------------PEGISPE 226 (254)
T ss_pred CHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCc----cHHHHHHHHh-ccC-CCCC--------------CCCCCHH
Confidence 00 0112356666 4 565554321 0111110000 000 0000 1112345
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+.+++.+|+..+|++||+|.+++.
T Consensus 227 ~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 227 LKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHHhCChhhCcCHHHHhc
Confidence 667889999999999999999874
No 295
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.61 E-value=1.2e-15 Score=155.20 Aligned_cols=116 Identities=27% Similarity=0.361 Sum_probs=93.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.+|++.. .++..+++|.+..........+..|+..++ .+++||+++++|.+++..
T Consensus 31 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 110 (292)
T cd06657 31 GSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 110 (292)
T ss_pred CCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc
Confidence 45788999876 468899999886544434445555555432 268999999999887743
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
..+++.....++.+++.|++|+| ..+++||||||+||+++.++.++++|||++....
T Consensus 111 --~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~ 167 (292)
T cd06657 111 --TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 167 (292)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecc
Confidence 34789999999999999999999 5689999999999999999999999999987554
No 296
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.61 E-value=1.7e-15 Score=162.72 Aligned_cols=207 Identities=25% Similarity=0.292 Sum_probs=125.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH----------------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK----------------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~----------------------------~Lv~ey~~~g 457 (639)
.++|.||++... .+..+|+|++..... ....|+.+++ .+|+||+++
T Consensus 77 G~fg~Vy~~~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~- 151 (440)
T PTZ00036 77 GSFGVVYEAICIDTSEKVAIKKVLQDPQ----YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ- 151 (440)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-
Confidence 468999999864 578999998753221 1122333321 157889885
Q ss_pred Cchhcccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC-cceeeccccccccccccCCCc
Q 041082 458 SLEKCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN-MVAHLSDFGMAKLLLKEDQSF 533 (639)
Q Consensus 458 sL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~-~~~~i~dfgla~~~~~~~~~~ 533 (639)
++.+++.. ....+++.....++.++++||+||| ..+|+||||||+||+++.+ +.+||+|||+|+.+.......
T Consensus 152 ~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~ 228 (440)
T PTZ00036 152 TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSV 228 (440)
T ss_pred cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcc
Confidence 66655532 3346888889999999999999999 6789999999999999965 479999999998664322110
Q ss_pred ----------cc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhC-CC-Ccceeeec-------
Q 041082 534 ----------TQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLL-PI-SVMEVVDV------- 580 (639)
Q Consensus 534 ----------~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~-~~-~~~~~~d~------- 580 (639)
+. ...+.++||| | ||+.|...... ...+...+...- +. ......++
T Consensus 229 ~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~ 307 (440)
T PTZ00036 229 SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS-VDQLVRIIQVLGTPTEDQLKEMNPNYADIKF 307 (440)
T ss_pred cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhchhhhcccC
Confidence 00 0123368888 6 88877653110 011111111000 00 00000000
Q ss_pred -cccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 581 -NLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 581 -~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.+.... .....+......+.+++.+|++.+|++|||+.|+++
T Consensus 308 ~~~~~~~-l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 308 PDVKPKD-LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CccCchh-HHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000000 000000112345778999999999999999999984
No 297
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.61 E-value=1.2e-15 Score=151.90 Aligned_cols=194 Identities=25% Similarity=0.342 Sum_probs=131.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
+++|.+|++... ++..+++|++..... .....+..|++..+ .+|+||+++++|.+.+
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 90 (258)
T cd08215 11 GSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKI 90 (258)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHH
Confidence 457889988865 578999999876532 23344555554422 2688999999999988
Q ss_pred ccC---CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc------
Q 041082 464 YSS---NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT------ 534 (639)
Q Consensus 464 ~~~---~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~------ 534 (639)
... ...+++.+...++.++++|++||| ..+++|+||+++||+++.++.++++|||++...........
T Consensus 91 ~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 167 (258)
T cd08215 91 KKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTP 167 (258)
T ss_pred HHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeee
Confidence 753 367899999999999999999999 56899999999999999999999999999986544321000
Q ss_pred ---------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHH
Q 041082 535 ---------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQC 596 (639)
Q Consensus 535 ---------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 596 (639)
....+.+.|+| | +|+.|.... ...+........... ..+...
T Consensus 168 ~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~---------------~~~~~~ 227 (258)
T cd08215 168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE-----NLLELALKILKGQYP---------------PIPSQY 227 (258)
T ss_pred cccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC-----cHHHHHHHHhcCCCC---------------CCCCCC
Confidence 00112256666 4 555554321 111111111110000 001122
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 597 LSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 597 ~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...+.+++.+|+..+|++||++.|+++
T Consensus 228 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 228 SSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 345677888999999999999999875
No 298
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.61 E-value=2.5e-15 Score=150.54 Aligned_cols=199 Identities=25% Similarity=0.313 Sum_probs=132.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.+|++... ++..+++|++.... ......+..+++.++ .+++||+++++|.+.+.
T Consensus 12 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~ 91 (267)
T cd06610 12 GATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMK 91 (267)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHH
Confidence 457899999854 57889999886433 223455666665533 26899999999999886
Q ss_pred cC--CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc---------
Q 041082 465 SS--NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF--------- 533 (639)
Q Consensus 465 ~~--~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~--------- 533 (639)
.. ...+++.....++.+++.|++||| ..+++||||||+||++++++.++++|||++..+.......
T Consensus 92 ~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 168 (267)
T cd06610 92 SSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVG 168 (267)
T ss_pred HhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccC
Confidence 52 245899999999999999999999 6789999999999999999999999999987665432110
Q ss_pred ------cc----c-ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch
Q 041082 534 ------TQ----N-TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 534 ------~~----~-~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
+. . ..+.++|+| | ||+.|...... ...+.++... . .+.+... ...
T Consensus 169 ~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~~~~---~------~~~~~~~-----~~~ 233 (267)
T cd06610 169 TPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP-MKVLMLTLQN---D------PPSLETG-----ADY 233 (267)
T ss_pred ChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh-hhhHHHHhcC---C------CCCcCCc-----ccc
Confidence 00 0 122356666 5 56665542111 1111111110 0 0000000 000
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
......+.+++..|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 234 KKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 123345678889999999999999999976
No 299
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.61 E-value=2.9e-15 Score=155.06 Aligned_cols=116 Identities=24% Similarity=0.320 Sum_probs=91.2
Q ss_pred CCCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 406 FSGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 406 l~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+.+++.||.+.. ..|..+|+|.+..... ...+.+..|..+.+ .+|+||+++|++.++
T Consensus 10 ~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~ 89 (328)
T cd08226 10 FCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSL 89 (328)
T ss_pred ccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHH
Confidence 346778999875 4789999999875432 22345555555532 258899999999988
Q ss_pred cccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccc
Q 041082 463 LYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524 (639)
Q Consensus 463 l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~ 524 (639)
+... ...+++.....++.+++.||+||| +.+|+||||||+||+++.++.++++|||.+.
T Consensus 90 l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~ 149 (328)
T cd08226 90 LKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLY 149 (328)
T ss_pred HHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHh
Confidence 8652 235889988999999999999999 6689999999999999999999999997543
No 300
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=7.6e-16 Score=141.42 Aligned_cols=193 Identities=22% Similarity=0.255 Sum_probs=131.8
Q ss_pred CcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 408 GFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 408 g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
-||.||.++.. ++..||+|++..+.. +...++.+|+++.. +|+.||.++|+++..|
T Consensus 34 kFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L 113 (281)
T KOG0580|consen 34 KFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDL 113 (281)
T ss_pred ccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHH
Confidence 38999999875 568999999865432 22345555555521 3788999999999999
Q ss_pred ccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-cc-------
Q 041082 464 YSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-FT------- 534 (639)
Q Consensus 464 ~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-~~------- 534 (639)
.+. ...++...-..+..++|.|+.|+| .+.|+||||||.|+|++.+++.|++|||-+......... .+
T Consensus 114 ~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~ 190 (281)
T KOG0580|consen 114 QEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLP 190 (281)
T ss_pred HhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCC
Confidence 752 234677777789999999999999 889999999999999999999999999988654322211 00
Q ss_pred -cc----ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHH
Q 041082 535 -QN----TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFV 600 (639)
Q Consensus 535 -~~----~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 600 (639)
.. .-....|+| | .|.+|...... +....+.. -.+..+|.-. ...+
T Consensus 191 pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~etYkrI~-------k~~~~~p~~i-------------s~~a 249 (281)
T KOG0580|consen 191 PEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SETYKRIR-------KVDLKFPSTI-------------SGGA 249 (281)
T ss_pred HhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHHHHHHH-------HccccCCccc-------------ChhH
Confidence 00 011156667 5 67777654321 11111111 1223333221 2245
Q ss_pred HHHHhhccCCCCCCCCCHHHHHHH
Q 041082 601 FNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 601 ~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+++..|...+|.+|.+..||+..
T Consensus 250 ~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 250 ADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHHHHHhccCccccccHHHHhhh
Confidence 678899999999999999999863
No 301
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.61 E-value=3e-15 Score=151.89 Aligned_cols=201 Identities=21% Similarity=0.271 Sum_probs=128.5
Q ss_pred CCcCcceEEEec----CCceeeeEEechhh----hhhhhhHHHHHHHHH---------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARIQ----DGMKVAVKVFDLQY----ERAFKSFDVACDMMK---------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l~----~g~~vavK~l~~~~----~~~~~~f~~e~~~~~---------------------~Lv~ey~~~g 457 (639)
.++|.+|++... ++..+++|.+.... ......+..|+..+. .+|+||+++|
T Consensus 11 G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (288)
T cd05583 11 GAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGG 90 (288)
T ss_pred CCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCC
Confidence 357889987643 46789999886432 112234445554421 2689999999
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc---
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT--- 534 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~--- 534 (639)
+|.+++... ..+++.....++.++++||+||| ..+++||||||+||+++.++.++++|||+++..........
T Consensus 91 ~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 166 (288)
T cd05583 91 ELFTHLYQR-EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSF 166 (288)
T ss_pred cHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccc
Confidence 999888643 35788888999999999999999 67899999999999999999999999999876543221100
Q ss_pred ---------c----c--ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccc
Q 041082 535 ---------Q----N--TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYF 590 (639)
Q Consensus 535 ---------~----~--~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 590 (639)
. . ..+.++||| | ||+.|.... .......++....... ++
T Consensus 167 ~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~-~~~~~~~~~~~~~~~~------~~---------- 229 (288)
T cd05583 167 CGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVD-GEQNSQSEISRRILKS------KP---------- 229 (288)
T ss_pred cCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccC-cccchHHHHHHHHHcc------CC----------
Confidence 0 0 012245666 4 555554210 0000111111111100 00
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 591 TTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 591 ~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
..+......+.+++.+|++.+|++|||+.+|.+.|...
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 230 PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 00111223466788899999999999999888776543
No 302
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.61 E-value=8.6e-16 Score=172.95 Aligned_cols=197 Identities=18% Similarity=0.246 Sum_probs=128.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
.+||.||++... .+..+++|.+.... ......|..|+.+++ .+||||+++|+|.+
T Consensus 24 GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~ 103 (1021)
T PTZ00266 24 GRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSR 103 (1021)
T ss_pred CCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHH
Confidence 468999998864 46788999876432 222345555665532 26899999999999
Q ss_pred cccc---CCccCCHHHHHHHHHHHHHhhhhhhccCC----CCeEeecCCCCceeecC-----------------Ccceee
Q 041082 462 CLYS---SNYILDIFQRLNIMIDVALALEYLHFGYS----TPIIHCDLKLSNVLLGN-----------------NMVAHL 517 (639)
Q Consensus 462 ~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~----~~i~h~dlk~~nill~~-----------------~~~~~i 517 (639)
++.. ....+++.....|+.+|+.||+|||.... .+|+||||||+|||++. ...+||
T Consensus 104 lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKL 183 (1021)
T PTZ00266 104 NIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKI 183 (1021)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEE
Confidence 8864 22458999999999999999999996432 46999999999999964 345899
Q ss_pred ccccccccccccCCCc----------ccc------ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCC
Q 041082 518 SDFGMAKLLLKEDQSF----------TQN------TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPI 572 (639)
Q Consensus 518 ~dfgla~~~~~~~~~~----------~~~------~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~ 572 (639)
+|||+++.+....... +.. ..+.++||| | ||+.|... ......++......
T Consensus 184 sDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~----~~~~~qli~~lk~~ 259 (1021)
T PTZ00266 184 GDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK----ANNFSQLISELKRG 259 (1021)
T ss_pred ccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc----CCcHHHHHHHHhcC
Confidence 9999998764322110 000 012256676 5 66666532 11111221111000
Q ss_pred CcceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 573 SVMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 573 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+.+. .......+.+++..|++.+|++||++.|++.
T Consensus 260 -------p~lp---------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 260 -------PDLP---------IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred -------CCCC---------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 0000 0111235677889999999999999999984
No 303
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.61 E-value=2e-15 Score=154.88 Aligned_cols=117 Identities=26% Similarity=0.407 Sum_probs=88.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH----------------------------hhhhhcCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK----------------------------KLVLEYMP 455 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~----------------------------~Lv~ey~~ 455 (639)
+++|.||++... ++..+|+|.+...... ....+..|+..++ .+|+||++
T Consensus 23 g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~ 102 (310)
T cd07865 23 GTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE 102 (310)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC
Confidence 467889999864 5789999987543211 1122233444321 46778886
Q ss_pred CCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 456 HGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 456 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+ ++.+.+......+++.+...++.+++.||+||| ..+++|+||||+||+++.++.+|++|||+++...
T Consensus 103 ~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 103 H-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred c-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 4 777776654446899999999999999999999 5689999999999999999999999999997653
No 304
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.61 E-value=5.4e-15 Score=148.23 Aligned_cols=197 Identities=20% Similarity=0.281 Sum_probs=129.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh------hhhhhHHHHHHHHH--------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE------RAFKSFDVACDMMK--------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~------~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL 459 (639)
.++|.+|++.. .++..+++|.+..... .....+..|+..++ .+|+||+++++|
T Consensus 11 g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L 90 (268)
T cd06630 11 GAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSV 90 (268)
T ss_pred cCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcH
Confidence 45788998874 5678999998864331 12345555655533 268999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc-ceeeccccccccccccCCCc-----
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-VAHLSDFGMAKLLLKEDQSF----- 533 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-~~~i~dfgla~~~~~~~~~~----- 533 (639)
.+++... ..+++.....++.+++.|++||| ..+++|+|||+.||+++.++ .++++|||+++.........
T Consensus 91 ~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 166 (268)
T cd06630 91 SHLLSKY-GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQG 166 (268)
T ss_pred HHHHHHh-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCcccc
Confidence 9988643 35789999999999999999999 66899999999999998775 69999999987664321100
Q ss_pred ----------cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccc
Q 041082 534 ----------TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYF 590 (639)
Q Consensus 534 ----------~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 590 (639)
+. ...+.++||| | +|+.|.... .................. .
T Consensus 167 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~--------------~ 230 (268)
T cd06630 167 QLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAE--KHSNHLALIFKIASATTA--------------P 230 (268)
T ss_pred ccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCC--CCcchHHHHHHHhccCCC--------------C
Confidence 00 1112357777 5 676665321 111111111100000000 0
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 591 TTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 591 ~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+.+......+.+++.+|+..+|++||++.|++.
T Consensus 231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 111222345777899999999999999999875
No 305
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.61 E-value=5.3e-15 Score=153.31 Aligned_cols=118 Identities=22% Similarity=0.308 Sum_probs=93.3
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.... +..+|+|.+..... .....+..+...+. .+|+||+++|+|.++
T Consensus 12 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~ 91 (332)
T cd05623 12 GAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTL 91 (332)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHH
Confidence 4578999998754 67899998854221 11223444444422 378999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+......+++.....++.+++.|++||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 92 l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 92 LSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 9764456889888999999999999999 6789999999999999999999999999987543
No 306
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.61 E-value=2.3e-15 Score=159.04 Aligned_cols=109 Identities=24% Similarity=0.278 Sum_probs=85.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++.- ..+..+|+|.... ..+..|+.+++. +|+||+. ++|..++..
T Consensus 103 G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~ 175 (391)
T PHA03212 103 GAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAA 175 (391)
T ss_pred CCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHh
Confidence 56889999875 4578899997532 234455555432 4667774 577776653
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
...+++.....|+.++++||+||| ..+|+||||||+||+++.++.+||+|||+|+..
T Consensus 176 -~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~ 232 (391)
T PHA03212 176 -KRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFP 232 (391)
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence 235889999999999999999999 668999999999999999999999999999754
No 307
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.61 E-value=7.1e-15 Score=148.94 Aligned_cols=212 Identities=21% Similarity=0.222 Sum_probs=129.6
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhh--hhhhhHHHHHHHH----------------------------HhhhhhcCC
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYE--RAFKSFDVACDMM----------------------------KKLVLEYMP 455 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~--~~~~~f~~e~~~~----------------------------~~Lv~ey~~ 455 (639)
+++|.+|++.... +..+++|.+..... .....+..++... ..+++||+.
T Consensus 10 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~ 89 (287)
T cd07838 10 GAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD 89 (287)
T ss_pred cCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc
Confidence 3578999999764 88999999864321 1112233333221 225677876
Q ss_pred CCCchhccccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--
Q 041082 456 HGSLEKCLYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-- 532 (639)
Q Consensus 456 ~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-- 532 (639)
+++.+++... ...++|..+..++.++++||+||| ..+++|+|||++||+++.++.++++|||++.........
T Consensus 90 -~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 165 (287)
T cd07838 90 -QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTS 165 (287)
T ss_pred -cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceeccCCccccc
Confidence 4787777542 235899999999999999999999 667999999999999999999999999999776432210
Q ss_pred --------cc----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCC-CCcc---ee-eeccccccc
Q 041082 533 --------FT----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLP-ISVM---EV-VDVNLLSME 586 (639)
Q Consensus 533 --------~~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~-~~~~---~~-~d~~l~~~~ 586 (639)
.+ ....+.++|+| | ||+.|.... .....+..+...... .... .. .........
T Consensus 166 ~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (287)
T cd07838 166 VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGT-SEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSY 244 (287)
T ss_pred ccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCC-ChHHHHHHHHHHcCCCChHhcCCCcccchhhcccc
Confidence 00 01123378888 6 776665421 111112222211110 0000 00 000000000
Q ss_pred cc--cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 587 DK--YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 587 ~~--~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.. ......+-...+.+++.+|++.+|++||+|.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 245 TPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 00001122356678999999999999999999875
No 308
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.61 E-value=5.6e-15 Score=149.46 Aligned_cols=118 Identities=25% Similarity=0.320 Sum_probs=90.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhh-hhhHHHHHHH---------------------HHhhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERA-FKSFDVACDM---------------------MKKLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~-~~~f~~e~~~---------------------~~~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++... .+..+++|++....... ......++.. ...+|+||+ +|++.+.+
T Consensus 10 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~ 88 (283)
T cd07830 10 GTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLM 88 (283)
T ss_pred CCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHH
Confidence 467899999986 46789999876443211 0111112211 113688999 78998888
Q ss_pred ccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 464 YSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 464 ~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
.... ..++|.++..++.+++.||+||| ..+++|+|||+.||+++.++.++++|||+++....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~ 151 (283)
T cd07830 89 KDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151 (283)
T ss_pred HhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence 6533 46899999999999999999999 56899999999999999999999999999986653
No 309
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.60 E-value=2e-15 Score=156.70 Aligned_cols=211 Identities=19% Similarity=0.243 Sum_probs=131.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH------------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK------------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~------------------------~Lv~ey~~~gsL 459 (639)
.++|.||++... .|..+++|++..... .....+..|+.+++ .+|+||+. |+|
T Consensus 16 g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l 94 (334)
T cd07855 16 GAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDL 94 (334)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhH
Confidence 457889988754 588999998864321 22233334444421 26788885 588
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------- 532 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------- 532 (639)
.+++... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++........
T Consensus 95 ~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 170 (334)
T cd07855 95 HHIIHSD-QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTE 170 (334)
T ss_pred HHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCccccc
Confidence 8877643 34899999999999999999999 668999999999999999999999999998765322110
Q ss_pred --------ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC---cc-eeeeccccc--
Q 041082 533 --------FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS---VM-EVVDVNLLS-- 584 (639)
Q Consensus 533 --------~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~---~~-~~~d~~l~~-- 584 (639)
.+. ...+.++||| | +|+.|..+. +.......+....... .. ++-+..+..
T Consensus 171 ~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 248 (334)
T cd07855 171 YVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK--NYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYI 248 (334)
T ss_pred ccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC--ChHHHHHHHHHHhCCChhHhhhhhchhhHHHHH
Confidence 000 1123378888 6 787776532 1111111111111110 00 000000000
Q ss_pred -cccc-cc----cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 585 -MEDK-YF----TTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 585 -~~~~-~~----~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.... .. +..+.....+.++..+|++.+|++||++.+++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 249 QNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000 00 0011234567889999999999999999998863
No 310
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.60 E-value=5.3e-15 Score=153.22 Aligned_cols=119 Identities=23% Similarity=0.272 Sum_probs=94.1
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..+...+. .+|+||+++|+|.++
T Consensus 12 G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~ 91 (331)
T cd05624 12 GAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTL 91 (331)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 468899999865 568899998864321 11223444444321 378999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+......+++.....++.+++.||+|+| ..+|+||||||.||+++.++.+||+|||+++....
T Consensus 92 l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 92 LSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 8764456888888999999999999999 77899999999999999999999999999976543
No 311
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.60 E-value=2.9e-15 Score=152.55 Aligned_cols=209 Identities=21% Similarity=0.236 Sum_probs=129.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHH--------------------------HhhhhhcCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMM--------------------------KKLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~--------------------------~~Lv~ey~~~g 457 (639)
+++|.||++... ++..+++|........ ....+..|+..+ ..+|+||+++
T Consensus 12 g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~- 90 (295)
T cd07837 12 GTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS- 90 (295)
T ss_pred cCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-
Confidence 457899999865 5889999987654321 122333444331 1478899885
Q ss_pred CchhccccC----CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-CcceeeccccccccccccCCC
Q 041082 458 SLEKCLYSS----NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLKEDQS 532 (639)
Q Consensus 458 sL~~~l~~~----~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~~~~~ 532 (639)
++.+++... ...+++.....++.+|+.||+||| ..+++|||||++||+++. ++.+|++|||+++........
T Consensus 91 ~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~ 167 (295)
T cd07837 91 DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKS 167 (295)
T ss_pred CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccc
Confidence 787776542 235799999999999999999999 678999999999999998 899999999998754321110
Q ss_pred -----------ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHh--hC--CCC--cceeeecc
Q 041082 533 -----------FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVND--LL--PIS--VMEVVDVN 581 (639)
Q Consensus 533 -----------~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~--~~--~~~--~~~~~d~~ 581 (639)
.+. ...+.++|+| | ||+.|... .....+.... .. +.. ..+..+..
T Consensus 168 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T cd07837 168 YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG----DSELQQLLHIFKLLGTPTEQVWPGVSKLR 243 (295)
T ss_pred cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCC----CCHHHHHHHHHHHhCCCChhhCcchhhcc
Confidence 001 1123478998 6 78776642 1111111110 00 000 00000000
Q ss_pred ccccc-cccc----cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 582 LLSME-DKYF----TTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 582 l~~~~-~~~~----~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
..... .... ...+.....+.+++.+|+..+|++||++.|++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 244 DWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred chhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000 0000 000123355778999999999999999999875
No 312
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=3.8e-15 Score=152.41 Aligned_cols=122 Identities=27% Similarity=0.366 Sum_probs=96.5
Q ss_pred CCcCcceEEE-ecCCceeeeEEechhhhhhh---hhHHHHHHHH--------------------HhhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKAR-IQDGMKVAVKVFDLQYERAF---KSFDVACDMM--------------------KKLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~-l~~g~~vavK~l~~~~~~~~---~~f~~e~~~~--------------------~~Lv~ey~~~gsL~~~ 462 (639)
..||.||.++ ..+...||+|+...+..+.. .++..|+..+ .-|||||+-+ |-.+.
T Consensus 37 GSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG-SAsDl 115 (948)
T KOG0577|consen 37 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG-SASDL 115 (948)
T ss_pred CccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc-cHHHH
Confidence 4588999887 45678999999987765543 3333444332 2389999974 77777
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS 532 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~ 532 (639)
+.-..+++.......|+.|+..||+||| +...||||||+-||||.+.+.+|++|||-|.+..+..++
T Consensus 116 leVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF 182 (948)
T KOG0577|consen 116 LEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF 182 (948)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence 6545567888888999999999999999 788999999999999999999999999999887765543
No 313
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.60 E-value=4.5e-15 Score=151.12 Aligned_cols=116 Identities=28% Similarity=0.420 Sum_probs=87.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
+++|.+|++... ++..+++|.+..... .....+..+++.++ .+|+||++ +++.+++
T Consensus 13 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~ 91 (294)
T PLN00009 13 GTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHM 91 (294)
T ss_pred CCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHH
Confidence 457889999865 678999998865432 22234555655533 26899996 5777766
Q ss_pred ccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-Ccceeeccccccccc
Q 041082 464 YSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLL 526 (639)
Q Consensus 464 ~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~ 526 (639)
... ...+++.....++.+++.||+||| ..+++||||||+||+++. +..+|++|||+++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 92 DSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred HhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence 442 233577778889999999999999 668999999999999985 567899999999754
No 314
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.60 E-value=7.3e-15 Score=150.98 Aligned_cols=195 Identities=23% Similarity=0.293 Sum_probs=127.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.+|++... .+..+++|.+..... .....+..|++.++ .+|+||+. |++.+.
T Consensus 32 g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~ 110 (313)
T cd06633 32 GSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDL 110 (313)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHH
Confidence 467899999864 578999998864332 22234445554432 26889986 577777
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------ccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------FTQ 535 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------~~~ 535 (639)
+......++|.++..++.+++.|++||| ..+++||||||+||+++.++.++++|||++......... .+.
T Consensus 111 l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE 187 (313)
T cd06633 111 LEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPE 187 (313)
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChh
Confidence 6554556899999999999999999999 667999999999999999999999999998654322111 000
Q ss_pred -------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 536 -------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 536 -------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
...+.++||| | +|+.|.... ... ..+............. ......
T Consensus 188 ~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~--~~~---~~~~~~~~~~~~~~~~--------------~~~~~~ 248 (313)
T cd06633 188 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAM---SALYHIAQNDSPTLQS--------------NEWTDS 248 (313)
T ss_pred hccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--ChH---HHHHHHHhcCCCCCCc--------------cccCHH
Confidence 1122356777 5 666665421 111 1111111110000000 111234
Q ss_pred HHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 600 VFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
+.+++.+|++.+|.+||++.+++..
T Consensus 249 l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 249 FRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 6678889999999999999999863
No 315
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.60 E-value=2.9e-15 Score=150.02 Aligned_cols=117 Identities=27% Similarity=0.393 Sum_probs=91.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-----hhhhhhHHHHHHHHH----------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-----ERAFKSFDVACDMMK----------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-----~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gs 458 (639)
+++|.||.+... .+..+++|.+.... ......+..|+..++ .+++||+++|+
T Consensus 13 g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (265)
T cd06652 13 GAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGS 92 (265)
T ss_pred CCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCc
Confidence 467889998864 47899999875422 112234555555422 25789999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
|.+++... ..+++....+++.+++.||+||| +.+++||||||+||+++.++.++++|||+++...
T Consensus 93 L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 93 IKDQLKSY-GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 99887643 34788888999999999999999 6679999999999999999999999999987543
No 316
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.60 E-value=1.7e-15 Score=166.22 Aligned_cols=118 Identities=25% Similarity=0.275 Sum_probs=82.6
Q ss_pred CCcCcceEEEecC-----CceeeeEEechhhhhhh---hhHHHH--------H-----------HHHHhhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQD-----GMKVAVKVFDLQYERAF---KSFDVA--------C-----------DMMKKLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~~-----g~~vavK~l~~~~~~~~---~~f~~e--------~-----------~~~~~Lv~ey~~~gsL 459 (639)
.+||.||++.... +..+|+|++........ ...... + .....+||||+++|+|
T Consensus 143 G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL 222 (566)
T PLN03225 143 GAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTL 222 (566)
T ss_pred CCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCceEEEEEecCCCcH
Confidence 4689999999754 58899998753211000 000000 0 0013478999999999
Q ss_pred hhccccCCcc-------------------CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-Ccceeecc
Q 041082 460 EKCLYSSNYI-------------------LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSD 519 (639)
Q Consensus 460 ~~~l~~~~~~-------------------l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~d 519 (639)
.+++...... ........|+.++++||+||| ..+|+||||||+|||++. ++.+||+|
T Consensus 223 ~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLKP~NILl~~~~~~~KL~D 299 (566)
T PLN03225 223 ADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVKPQNIIFSEGSGSFKIID 299 (566)
T ss_pred HHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCCHHHEEEeCCCCcEEEEe
Confidence 9887642211 112234578999999999999 678999999999999996 58999999
Q ss_pred cccccccc
Q 041082 520 FGMAKLLL 527 (639)
Q Consensus 520 fgla~~~~ 527 (639)
||+|+.+.
T Consensus 300 FGlA~~l~ 307 (566)
T PLN03225 300 LGAAADLR 307 (566)
T ss_pred CCCccccc
Confidence 99998653
No 317
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.60 E-value=4e-15 Score=156.10 Aligned_cols=114 Identities=27% Similarity=0.323 Sum_probs=85.2
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------------~Lv~ey~~~g 457 (639)
.++|.||++.- ..|..+|+|.+.... ......+..|+..++ .+|+||+++
T Consensus 32 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 110 (359)
T cd07876 32 GAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA- 110 (359)
T ss_pred CCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-
Confidence 46889999875 457899999985432 122233444444422 357778764
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
++...++ ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 111 NLCQVIH---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred CHHHHHh---ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 4545443 23778888899999999999999 6789999999999999999999999999997643
No 318
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.60 E-value=1.8e-15 Score=147.95 Aligned_cols=119 Identities=30% Similarity=0.423 Sum_probs=90.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.+||.||..+-. .++..|+|++.-...- .......|..++. +||.||+.+|.|..+
T Consensus 36 G~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~h 115 (357)
T KOG0598|consen 36 GSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYH 115 (357)
T ss_pred cCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHH
Confidence 468889887754 5789999998654321 1223334444422 378999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
|.++. .++.....-++..|+.||.||| +.+|||||+||+|||||.++.++++|||+++....+
T Consensus 116 L~~eg-~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 116 LQREG-RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred HHhcC-CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 97543 4666655557788999999999 889999999999999999999999999999965443
No 319
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.60 E-value=3.3e-15 Score=158.42 Aligned_cols=112 Identities=29% Similarity=0.292 Sum_probs=85.7
Q ss_pred CCcCcceEEEec---CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ---DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~---~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.||++... .+..+++|.+... .....|+.+++ .+++||+. +++.+++
T Consensus 103 G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l 176 (392)
T PHA03207 103 GSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYV 176 (392)
T ss_pred CCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHH
Confidence 457899988653 3467888887532 12234444432 25677775 5777777
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
. ....++|..+..|+.+++.||+||| ..+|+||||||+||+++.++.++|+|||+++.+..
T Consensus 177 ~-~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 177 D-RSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred H-hcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 3 3346899999999999999999999 66899999999999999999999999999976543
No 320
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.60 E-value=6.1e-15 Score=149.02 Aligned_cols=211 Identities=25% Similarity=0.249 Sum_probs=131.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++... .+..+++|.+.... ......+..++..++ .+|+||++ ++|.+++
T Consensus 10 g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i 88 (282)
T cd07829 10 GTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYL 88 (282)
T ss_pred cCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHH
Confidence 457889998875 48899999887543 222233444444322 26789998 5899888
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----------- 532 (639)
......+++..+.+++.++++|++||| ..+|+||||+++||++++++.++++|||+++........
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~ 165 (282)
T cd07829 89 DKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYR 165 (282)
T ss_pred HhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcC
Confidence 764356899999999999999999999 567999999999999999999999999998865433210
Q ss_pred ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCC--C--c---cee--eeccccccccc-
Q 041082 533 FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPI--S--V---MEV--VDVNLLSMEDK- 588 (639)
Q Consensus 533 ~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~--~--~---~~~--~d~~l~~~~~~- 588 (639)
.+. ...+.++||| | +|+.|....- .......+...... . . .+. .+.........
T Consensus 166 aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (282)
T cd07829 166 APEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS--EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKD 243 (282)
T ss_pred ChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccc
Confidence 000 0223478888 6 7766654210 01111111111000 0 0 000 00000000000
Q ss_pred cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 589 ~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.....+.....+.+++.+|++.+|++||++.+|+.
T Consensus 244 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 244 LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000111346888999999999999999999975
No 321
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.60 E-value=2.8e-15 Score=156.93 Aligned_cols=110 Identities=24% Similarity=0.269 Sum_probs=85.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHH--------------------HhhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMM--------------------KKLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~--------------------~~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++... .+..+|+|...... ...|..++ ..+|+||+. |+|.+++..
T Consensus 77 G~~g~Vy~~~~~~~~~~valK~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~ 149 (357)
T PHA03209 77 GSEGRVFVATKPGQPDPVVLKIGQKGT------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTK 149 (357)
T ss_pred CCCeEEEEEEECCCCceEEEEeCCccc------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHh
Confidence 468899999875 45788888643221 11222221 236778874 688888765
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
....++|..+.+|+.++++||+||| ..+|+||||||.||+++.++.+||+|||+++..
T Consensus 150 ~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 150 RSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 5567899999999999999999999 668999999999999999999999999999754
No 322
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.60 E-value=2.9e-15 Score=155.59 Aligned_cols=210 Identities=20% Similarity=0.227 Sum_probs=129.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh-hhhhhhHHHHHHHHH-------------------------hhhhhcCCCCCc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY-ERAFKSFDVACDMMK-------------------------KLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~-~~~~~~f~~e~~~~~-------------------------~Lv~ey~~~gsL 459 (639)
.++|.||++.. ..|..+|+|.+.... ......+..|+..++ .+++||+++ ++
T Consensus 16 G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l 94 (336)
T cd07849 16 GAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DL 94 (336)
T ss_pred cCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CH
Confidence 45788999875 468899999885321 122233444444322 256777764 66
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------- 532 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------- 532 (639)
.+.+.. ..+++.....++.++++||+||| ..+|+||||||+||+++.++.+|++|||+++........
T Consensus 95 ~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 169 (336)
T cd07849 95 YKLIKT--QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEY 169 (336)
T ss_pred HHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCc
Confidence 666543 35889999999999999999999 678999999999999999999999999998765422110
Q ss_pred -------ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC----cceeeecccccccc
Q 041082 533 -------FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS----VMEVVDVNLLSMED 587 (639)
Q Consensus 533 -------~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~~d~~l~~~~~ 587 (639)
.+. ...+.++||| | ||+.|..+. +......++....... ...+.+........
T Consensus 170 ~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (336)
T cd07849 170 VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK--DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIK 247 (336)
T ss_pred CcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHh
Confidence 010 1123378998 6 888776431 1111111111111111 11111111000000
Q ss_pred ---ccccc-----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 588 ---KYFTT-----KKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 588 ---~~~~~-----~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
..... .+.....+.+++.+|++.+|++||++.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 248 SLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 01123457889999999999999999999875
No 323
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.59 E-value=3.5e-15 Score=150.96 Aligned_cols=117 Identities=29% Similarity=0.408 Sum_probs=90.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHH---------------------------HhhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMM---------------------------KKLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~---------------------------~~Lv~ey~~~gs 458 (639)
.++|.+|++.. ..+..+++|.+...... ...+..+.... ..+++||+++|+
T Consensus 27 g~~~~v~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~ 105 (282)
T cd06636 27 GTYGQVYKGRHVKTGQLAAIKVMDVTEDE-EEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGS 105 (282)
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEecChHH-HHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCc
Confidence 46888999886 45788999987654322 22333333321 137899999999
Q ss_pred chhcccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 459 LEKCLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 459 L~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
|.+++.. ....+++..+..++.+++.|++||| ..+++|||||++||++++++.++++|||+++...
T Consensus 106 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 106 VTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred HHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 9988864 2345788888999999999999999 6689999999999999999999999999987543
No 324
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.59 E-value=1.7e-15 Score=151.29 Aligned_cols=199 Identities=21% Similarity=0.230 Sum_probs=128.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHH---------------------HhhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMM---------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+...... ....+..+.... ..+|+||+++|+|.+
T Consensus 7 g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 86 (260)
T cd05611 7 GAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCAS 86 (260)
T ss_pred CCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHH
Confidence 457899999764 5789999988643211 112222222221 137899999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------cc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS-------FT 534 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~-------~~ 534 (639)
++... ..+++....+++.+++.||.||| ..+++||||+|+||+++.++.++++|||+++........ .+
T Consensus 87 ~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~p 162 (260)
T cd05611 87 LIKTL-GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAP 162 (260)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccCh
Confidence 88643 35788888999999999999999 678999999999999999999999999998764322110 00
Q ss_pred ----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHHHH
Q 041082 535 ----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSFVF 601 (639)
Q Consensus 535 ----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 601 (639)
....+.++||| | ||..|..... -.+........... ..+ .....+...+.
T Consensus 163 e~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~ 225 (260)
T cd05611 163 ETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-----PDAVFDNILSRRIN--WPE----------EVKEFCSPEAV 225 (260)
T ss_pred hhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcccC--CCC----------cccccCCHHHH
Confidence 01123467888 6 7777764311 11111111000000 000 00112234577
Q ss_pred HHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 602 NLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 602 ~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
+++.+|++.+|++||++.++.+.+.
T Consensus 226 ~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 226 DLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HHHHHHccCCHHHccCCCcHHHHHc
Confidence 8899999999999998877655443
No 325
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.59 E-value=2.1e-15 Score=153.03 Aligned_cols=211 Identities=22% Similarity=0.256 Sum_probs=132.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.++|.+|++... ++..+++|.+.... ......+..|++.++ .+++||++++.+..+.
T Consensus 12 g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~ 91 (288)
T cd07833 12 GAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLE 91 (288)
T ss_pred cCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHH
Confidence 457889998875 47899999876532 222345556665533 2688999987666554
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC-C----------
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ-S---------- 532 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~-~---------- 532 (639)
. ....+++.....++.++++|++||| ..+++|||||++||++++++.+|++|||++........ .
T Consensus 92 ~-~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~ 167 (288)
T cd07833 92 A-SPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWY 167 (288)
T ss_pred h-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCC
Confidence 3 3345889999999999999999999 66899999999999999999999999999887654321 0
Q ss_pred -ccc----c-ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhC---CCCcceee--eccccc----cccc
Q 041082 533 -FTQ----N-TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLL---PISVMEVV--DVNLLS----MEDK 588 (639)
Q Consensus 533 -~~~----~-~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~---~~~~~~~~--d~~l~~----~~~~ 588 (639)
.+. . ..+.++||| | +|+.|.... ............. +......+ ++...+ ....
T Consensus 168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (288)
T cd07833 168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD--SDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQ 245 (288)
T ss_pred cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCC
Confidence 000 1 223478888 6 777666421 1111000000000 00000000 000000 0000
Q ss_pred ----cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 589 ----YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 589 ----~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
....+..+...+.+++.+|+..+|++||+|.+|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 246 PESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00001122467889999999999999999999875
No 326
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.59 E-value=3.5e-15 Score=150.64 Aligned_cols=117 Identities=24% Similarity=0.305 Sum_probs=89.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHH---HH--------------------HhhhhhcCCCCCc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACD---MM--------------------KKLVLEYMPHGSL 459 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~---~~--------------------~~Lv~ey~~~gsL 459 (639)
.++|.||++... .+..+|+|.+...... ....+..+.. .. ..+|+||+++|+|
T Consensus 5 g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L 84 (278)
T cd05606 5 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 84 (278)
T ss_pred CCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcH
Confidence 457899988754 5789999988643211 1111111111 11 1268999999999
Q ss_pred hhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 460 EKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 460 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
..++.. ...++|..+..++.++++|++||| ..+|+||||||+||+++.++.++++|||+++...
T Consensus 85 ~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~ 148 (278)
T cd05606 85 HYHLSQ-HGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 148 (278)
T ss_pred HHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence 888754 346899999999999999999999 6789999999999999999999999999987553
No 327
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.59 E-value=2.5e-15 Score=157.84 Aligned_cols=117 Identities=24% Similarity=0.368 Sum_probs=93.6
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|++..... .....+..|..++. .+|+||+++|+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (363)
T cd05628 12 GAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTL 91 (363)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHH
Confidence 468899998754 578999999865321 22234444554432 378999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+... ..+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 92 l~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 92 LMKK-DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 8653 45889999999999999999999 6789999999999999999999999999987653
No 328
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.59 E-value=3.3e-15 Score=148.59 Aligned_cols=195 Identities=24% Similarity=0.298 Sum_probs=133.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.+|++... ++..+++|++..... .....+..+++..+ .+++||+++++|.+
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~ 90 (260)
T cd06606 11 GSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSS 90 (260)
T ss_pred cCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHH
Confidence 467899999876 688999998865542 23345555555422 26889999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC---Cc-----
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ---SF----- 533 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~---~~----- 533 (639)
++.... .++|..+..++.++++|++||| ..+++|+|++|+||+++.++.++++|||.+........ ..
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 166 (260)
T cd06606 91 LLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGT 166 (260)
T ss_pred HHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCC
Confidence 886533 7899999999999999999999 57899999999999999999999999999887654432 00
Q ss_pred -----cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 534 -----TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 534 -----~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
+. ...+.+.||| | +|+.|..... ....-+.... .... ....+..
T Consensus 167 ~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~--------~~~~------~~~~~~~ 228 (260)
T cd06606 167 PYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKIG--------SSGE------PPEIPEH 228 (260)
T ss_pred ccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhcc--------ccCC------CcCCCcc
Confidence 00 0122356777 5 5666654211 0000000000 0000 0001112
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
....+.+++.+|++.+|++||++.|++.
T Consensus 229 ~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 229 LSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 2456778888999999999999999985
No 329
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.59 E-value=4.6e-15 Score=150.16 Aligned_cols=212 Identities=21% Similarity=0.253 Sum_probs=130.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.++|.+|++... +|..+++|.+...... ....+..|+..++ .+|+||+++ ++.+++.
T Consensus 11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~ 89 (284)
T cd07836 11 GTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMD 89 (284)
T ss_pred CCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHH
Confidence 457889999875 5789999988754322 2234444554422 378999985 7877765
Q ss_pred cCC--ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC----------
Q 041082 465 SSN--YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS---------- 532 (639)
Q Consensus 465 ~~~--~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~---------- 532 (639)
... ..+++.+..+++.+++.||+||| ..+++||||||+||+++++++++++|||+++........
T Consensus 90 ~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y 166 (284)
T cd07836 90 THGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWY 166 (284)
T ss_pred hcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccc
Confidence 422 45899999999999999999999 667999999999999999999999999998754321100
Q ss_pred -ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhh-CCCC--cceeee-----cccccccc-c
Q 041082 533 -FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDL-LPIS--VMEVVD-----VNLLSMED-K 588 (639)
Q Consensus 533 -~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~-~~~~--~~~~~d-----~~l~~~~~-~ 588 (639)
.+. ...+.++|+| | ||+.|..+....+ .+..-.+.. .+.. .....+ ........ .
T Consensus 167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (284)
T cd07836 167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQD 245 (284)
T ss_pred cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHH
Confidence 000 1113368888 6 7887765321110 000000000 0000 000000 00000000 0
Q ss_pred cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 589 YFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 589 ~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.....+.....+.++...|++.+|++||++.||++
T Consensus 246 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 246 LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00001122345678899999999999999999875
No 330
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.59 E-value=5.3e-15 Score=151.77 Aligned_cols=212 Identities=24% Similarity=0.265 Sum_probs=130.0
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhh--hhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERA--FKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~--~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .|..+|+|.+....... ...+..|+..++ .+|+||+++ +|.+
T Consensus 18 g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 96 (309)
T cd07845 18 GTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLAS 96 (309)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHH
Confidence 457889999864 58899999986543211 112233443321 367888864 7777
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC---------
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--------- 532 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--------- 532 (639)
++......++|.++..++.++++|++||| ..+++||||||+||+++.++.+|++|||+++........
T Consensus 97 ~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~ 173 (309)
T cd07845 97 LLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLW 173 (309)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCccccccc
Confidence 77654456899999999999999999999 667999999999999999999999999999876432111
Q ss_pred --ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCccee---e-eccccccc------
Q 041082 533 --FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEV---V-DVNLLSME------ 586 (639)
Q Consensus 533 --~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~---~-d~~l~~~~------ 586 (639)
.+. ...+.++||| | +|+.|.... .......-+.........+. + +.......
T Consensus 174 y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (309)
T cd07845 174 YRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK--SEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQP 251 (309)
T ss_pred ccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCC
Confidence 000 1123478888 6 787776431 11111111111111100000 0 00000000
Q ss_pred -cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 587 -DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 587 -~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.............+.+++..|++.+|++|||+.||+..
T Consensus 252 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 252 YNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred CCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000001113456778999999999999999999853
No 331
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.59 E-value=4.6e-15 Score=147.94 Aligned_cols=194 Identities=19% Similarity=0.241 Sum_probs=130.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.+++.+|++... .+..+++|.+..... ...+.+..|++.++ .+|+||+++++|.++
T Consensus 11 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (258)
T cd05578 11 GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYH 90 (258)
T ss_pred CCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHH
Confidence 467889999875 578999998865432 23445555555432 267899999999988
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc---------
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF--------- 533 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~--------- 533 (639)
+... ..+++.+...++.++++||+||| ..+++|+||||+||++++++.++++|||++..........
T Consensus 91 l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~ 166 (258)
T cd05578 91 LSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYM 166 (258)
T ss_pred HHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhc
Confidence 8653 46889999999999999999999 6679999999999999999999999999987654331110
Q ss_pred -cc----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHHH
Q 041082 534 -TQ----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLSF 599 (639)
Q Consensus 534 -~~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 599 (639)
+. ...+.++|+| | +|+.|....-.. ..++........ .. ..+......
T Consensus 167 ~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-~~--------------~~~~~~~~~ 228 (258)
T cd05578 167 APEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQETA-DV--------------LYPATWSTE 228 (258)
T ss_pred CHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhccc-cc--------------cCcccCcHH
Confidence 00 1123366776 5 666665421110 111211111100 00 011122356
Q ss_pred HHHHHhhccCCCCCCCCCH--HHHH
Q 041082 600 VFNLAMECTAESPKQRINA--KESV 622 (639)
Q Consensus 600 ~~~l~~~C~~~~p~~RP~m--~~v~ 622 (639)
+.+++.+|++.+|++||++ .|+.
T Consensus 229 ~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 229 AIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHHHHccCChhHcCCccHHHHh
Confidence 6788899999999999999 5543
No 332
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.59 E-value=3.2e-15 Score=152.81 Aligned_cols=211 Identities=23% Similarity=0.247 Sum_probs=130.1
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH------------------------------hhhhhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK------------------------------KLVLEY 453 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~------------------------------~Lv~ey 453 (639)
.++|.||++... +|..+++|.+...... ....+..|+.+++ .+|+||
T Consensus 18 g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 97 (302)
T cd07864 18 GTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEY 97 (302)
T ss_pred cCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcc
Confidence 357899999875 5789999998654321 1123334443321 267888
Q ss_pred CCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-
Q 041082 454 MPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS- 532 (639)
Q Consensus 454 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~- 532 (639)
+++ ++...+......++|.....++.+++.||+||| ..+|+|||||++||++++++.+|++|||+++........
T Consensus 98 ~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 173 (302)
T cd07864 98 MDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRP 173 (302)
T ss_pred cCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccc
Confidence 875 666666544446899999999999999999999 668999999999999999999999999999865432210
Q ss_pred -----------ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhh---CCCCccee-------
Q 041082 533 -----------FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDL---LPISVMEV------- 577 (639)
Q Consensus 533 -----------~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~---~~~~~~~~------- 577 (639)
.+. ...+.++||| | +|+.|....- ....+....... .+....++
T Consensus 174 ~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T cd07864 174 YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ-ELAQLELISRLCGSPCPAVWPDVIKLPYFN 252 (302)
T ss_pred cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHhCCCChhhccccccccccc
Confidence 000 1123468888 6 7877765311 101111111100 00000000
Q ss_pred -eeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 578 -VDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 578 -~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.|+.-.... ...+........+.+++.+|++.+|++||++.+|+.
T Consensus 253 ~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 253 TMKPKKQYRR-RLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred cccccccccc-chhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 010000000 000000112356788999999999999999999875
No 333
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.59 E-value=2.5e-15 Score=156.22 Aligned_cols=211 Identities=19% Similarity=0.244 Sum_probs=130.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHH-------------------------HhhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMM-------------------------KKLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~-------------------------~~Lv~ey~~~gs 458 (639)
.++|.||++.- ..+..+++|.+.... ......+..|+..+ ..+|+||+. ++
T Consensus 16 G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 94 (337)
T cd07858 16 GAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TD 94 (337)
T ss_pred CCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CC
Confidence 45788998875 467899999876432 11122233333331 146788886 57
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC------
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------ 532 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------ 532 (639)
|.+++... ..+++.....++.+++.||.||| ..+++||||||+||+++.++.+|++|||+++........
T Consensus 95 L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~ 170 (337)
T cd07858 95 LHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVV 170 (337)
T ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccccccccc
Confidence 87777542 45889999999999999999999 668999999999999999999999999999865432110
Q ss_pred -----ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCC----CCcceeeecccccc----
Q 041082 533 -----FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLP----ISVMEVVDVNLLSM---- 585 (639)
Q Consensus 533 -----~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~----~~~~~~~d~~l~~~---- 585 (639)
.+. ...+.++|+| | +|+.|.... +............. +....+.++.....
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
T cd07858 171 TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK--DYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSL 248 (337)
T ss_pred ccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC--ChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhc
Confidence 000 1123478998 7 787776421 10000000000000 00101111110000
Q ss_pred --c--cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 586 --E--DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 586 --~--~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
. .......+.+...+.+++.+|++.+|++||++.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 249 PYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0 00000011234567889999999999999999999976
No 334
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.59 E-value=6.3e-15 Score=153.56 Aligned_cols=116 Identities=27% Similarity=0.319 Sum_probs=86.1
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHHh--------------------------hhhhcCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMKK--------------------------LVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~~--------------------------Lv~ey~~~g 457 (639)
+++|.||++.. ..+..+|+|.+..... .....+..|+..++. ++++++ ++
T Consensus 26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 104 (343)
T cd07878 26 GAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GA 104 (343)
T ss_pred CCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CC
Confidence 56889999975 4678999998864321 122234344444332 233443 55
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+|.+++.. ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++....
T Consensus 105 ~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 105 DLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 67666542 35889999999999999999999 67899999999999999999999999999987543
No 335
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.59 E-value=7e-16 Score=159.95 Aligned_cols=203 Identities=22% Similarity=0.309 Sum_probs=127.4
Q ss_pred cCcceEEEec-CCceeeeEEechhh----hhhhhhHHHHHHHHHh----------------------hhhhcCCCCCchh
Q 041082 409 FGSIYKARIQ-DGMKVAVKVFDLQY----ERAFKSFDVACDMMKK----------------------LVLEYMPHGSLEK 461 (639)
Q Consensus 409 ~g~vy~~~l~-~g~~vavK~l~~~~----~~~~~~f~~e~~~~~~----------------------Lv~ey~~~gsL~~ 461 (639)
|-+||+|.-. .|..||--.+.... .+....|..|+.+++. +|.|.|..|+|..
T Consensus 53 fKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~ 132 (632)
T KOG0584|consen 53 FKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLRE 132 (632)
T ss_pred ceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHH
Confidence 4468887643 46666543333221 2334677788888653 5789999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-CcceeeccccccccccccCCCcccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLKEDQSFTQNTNTC 540 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~~~~~~~~~~~~~ 540 (639)
+..+.. .++.....++|.+|.+||.|||.. .|||+|||||..||.+.+ -|++||+|.|||.+....... ...+|.
T Consensus 133 Y~kk~~-~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak--svIGTP 208 (632)
T KOG0584|consen 133 YRKKHR-RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK--SVIGTP 208 (632)
T ss_pred HHHHhc-cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccc--eeccCc
Confidence 886532 366777889999999999999964 899999999999999986 589999999999987544322 223333
Q ss_pred ---ccccccCCCCCCCccCCCccchHHHHHhhCCCC----cceeeeccccccccccccchHHH-----HHHHHHHHhhcc
Q 041082 541 ---HHRIYGTRRNPQMNFFSGEMTLKSWVNDLLPIS----VMEVVDVNLLSMEDKYFTTKKQC-----LSFVFNLAMECT 608 (639)
Q Consensus 541 ---~~dvyGtg~~p~~~~~~~~~~l~~~~~~~~~~~----~~~~~d~~l~~~~~~~~~~~~~~-----~~~~~~l~~~C~ 608 (639)
+..+|-.+.-..-|+|+.||.+.+.|+..+|.. ...+.-.-+.| .++++ -..+-+++-.|+
T Consensus 209 EFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SG-------iKP~sl~kV~dPevr~fIekCl 281 (632)
T KOG0584|consen 209 EFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSG-------IKPAALSKVKDPEVREFIEKCL 281 (632)
T ss_pred cccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcC-------CCHHHhhccCCHHHHHHHHHHh
Confidence 111220000112233455555555555555432 01110000000 00111 123556778999
Q ss_pred CCCCCCCCCHHHHHH
Q 041082 609 AESPKQRINAKESVT 623 (639)
Q Consensus 609 ~~~p~~RP~m~~v~~ 623 (639)
.. .++|||+.|.+.
T Consensus 282 ~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 282 AT-KSERLSAKELLK 295 (632)
T ss_pred cC-chhccCHHHHhh
Confidence 98 899999999875
No 336
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.59 E-value=2.4e-15 Score=146.61 Aligned_cols=117 Identities=29% Similarity=0.395 Sum_probs=90.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEec--hhhhhhhhhHHHHHHHHH-------------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFD--LQYERAFKSFDVACDMMK-------------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~--~~~~~~~~~f~~e~~~~~-------------------------~Lv~ey~~~gs 458 (639)
..+|.|..+.- ..|..||+|++. +......+..-+|+..++ ++|+|+|+ .+
T Consensus 33 GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tD 111 (359)
T KOG0660|consen 33 GAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TD 111 (359)
T ss_pred cceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-hH
Confidence 34677777664 568999999986 443333344445555533 26788884 47
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
|.+.++. ...|+-....-+..|+.+||.|+| +.+|+|||+||+|++++.+...||+|||+||...+
T Consensus 112 L~~iik~-~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 112 LHQIIKS-QQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK 177 (359)
T ss_pred HHHHHHc-CccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeeccc
Confidence 8777764 334778878888999999999999 77899999999999999999999999999998854
No 337
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.59 E-value=8e-15 Score=148.95 Aligned_cols=118 Identities=27% Similarity=0.372 Sum_probs=91.9
Q ss_pred CCcCcceEEEe----cCCceeeeEEechhhh----hhhhhHHHHHHHHH---------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI----QDGMKVAVKVFDLQYE----RAFKSFDVACDMMK---------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l----~~g~~vavK~l~~~~~----~~~~~f~~e~~~~~---------------------~Lv~ey~~~g 457 (639)
.++|.+|.+.. .+|..+|+|++..... .....+..|+..++ .+|+||+++|
T Consensus 11 G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (290)
T cd05613 11 GAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGG 90 (290)
T ss_pred CCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCC
Confidence 45788998775 3678899999864321 11233444444421 3789999999
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+|.+++... ..+++.....++.++++||+||| ..+++||||||+||+++.++.+|++|||+++....
T Consensus 91 ~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 91 ELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred cHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 999988643 35788888889999999999999 67899999999999999999999999999986543
No 338
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.59 E-value=2.7e-15 Score=147.05 Aligned_cols=207 Identities=20% Similarity=0.264 Sum_probs=131.0
Q ss_pred cCcceEEEe-cCCceeeeEEechhhhh---hhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccc
Q 041082 409 FGSIYKARI-QDGMKVAVKVFDLQYER---AFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLY 464 (639)
Q Consensus 409 ~g~vy~~~l-~~g~~vavK~l~~~~~~---~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~ 464 (639)
+|.|-++.- ..|..||||.+..+... ..-.+.+|+++|.. +||||..+|.|++++.
T Consensus 66 YGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiS 145 (668)
T KOG0611|consen 66 YGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYIS 145 (668)
T ss_pred ccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHH
Confidence 566666664 46899999988765433 23345667777543 6899999999999997
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcccccccc--cc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTC--HH 542 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~--~~ 542 (639)
+. ..|+.....+++.||..|+.|.| ..+|+|||||..|||||.+.++||+|||++.++..+..-.+...+.. ..
T Consensus 146 er-~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASP 221 (668)
T KOG0611|consen 146 ER-GSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASP 221 (668)
T ss_pred Hh-ccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCc
Confidence 53 35778778899999999999999 88999999999999999999999999999988766543222111100 01
Q ss_pred ccc-cCC-CCCCCccCCCccchHHHHHhhCCCCcce--eeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 041082 543 RIY-GTR-RNPQMNFFSGEMTLKSWVNDLLPISVME--VVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINA 618 (639)
Q Consensus 543 dvy-Gtg-~~p~~~~~~~~~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m 618 (639)
.+. |+. +.|--|.|+-|+-|...|....|.+..+ .+=..|.. ..++. ++.......|+...+..+|++|-|.
T Consensus 222 EIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~-GaYrE---P~~PSdA~gLIRwmLmVNP~RRATi 297 (668)
T KOG0611|consen 222 EIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISR-GAYRE---PETPSDASGLIRWMLMVNPERRATI 297 (668)
T ss_pred cccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhc-ccccC---CCCCchHHHHHHHHHhcCcccchhH
Confidence 111 210 1122234444555544454444433111 00011110 00000 1112223346667778899999998
Q ss_pred HHHHH
Q 041082 619 KESVT 623 (639)
Q Consensus 619 ~~v~~ 623 (639)
.+|..
T Consensus 298 eDiAs 302 (668)
T KOG0611|consen 298 EDIAS 302 (668)
T ss_pred HHHhh
Confidence 88864
No 339
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.59 E-value=4.9e-15 Score=158.73 Aligned_cols=111 Identities=26% Similarity=0.280 Sum_probs=88.0
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
.++|.||++.... +..|++|.... ..+..|+++++ .+|++|+. |+|..++..
T Consensus 180 G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~ 252 (461)
T PHA03211 180 GSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGA 252 (461)
T ss_pred CCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHh
Confidence 4688999998754 67899996432 23344555533 25677774 688887765
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
....++|.++..|+.++++||+||| ..+|+|||||++|||++.++.+||+|||+++.+.
T Consensus 253 ~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 253 RLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 4456999999999999999999999 6689999999999999999999999999998654
No 340
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.58 E-value=5e-15 Score=156.52 Aligned_cols=116 Identities=22% Similarity=0.346 Sum_probs=92.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. ..+..+|+|++.... ......+..|..+++ .+|+||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (381)
T cd05626 12 GAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (381)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHH
Confidence 56899999975 457899999986532 122344556665533 368999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++.+
T Consensus 92 l~~~-~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~ 151 (381)
T cd05626 92 LIRM-EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGF 151 (381)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence 8643 35788888889999999999999 678999999999999999999999999998643
No 341
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.58 E-value=1e-14 Score=150.03 Aligned_cols=117 Identities=24% Similarity=0.382 Sum_probs=87.7
Q ss_pred CCcCcceEEEecC---CceeeeEEechhh---hhhhhhHHHHHHHHH----------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQD---GMKVAVKVFDLQY---ERAFKSFDVACDMMK----------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~~---g~~vavK~l~~~~---~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gs 458 (639)
.++|.||++.... +..+|+|.+.... ......+..++.+++ .+|+||+++ +
T Consensus 11 g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~ 89 (316)
T cd07842 11 GTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-D 89 (316)
T ss_pred CCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-C
Confidence 4578899998754 7899999987532 222233444444422 367888875 5
Q ss_pred chhcccc----CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC----Ccceeecccccccccc
Q 041082 459 LEKCLYS----SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN----NMVAHLSDFGMAKLLL 527 (639)
Q Consensus 459 L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~----~~~~~i~dfgla~~~~ 527 (639)
+.+.+.. ....++......|+.+++.|++||| ..+++||||||+||+++. ++.+|++|||+++...
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~ 163 (316)
T cd07842 90 LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN 163 (316)
T ss_pred HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccC
Confidence 6555432 1225788888999999999999999 667999999999999999 9999999999988654
No 342
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.58 E-value=3.4e-15 Score=153.76 Aligned_cols=115 Identities=23% Similarity=0.332 Sum_probs=85.1
Q ss_pred CCcCcceEEEecC---CceeeeEEechhhhhhhhhHHHHHHHHH----------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQD---GMKVAVKVFDLQYERAFKSFDVACDMMK----------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~~---g~~vavK~l~~~~~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.||++...+ +..+|+|.+.... ....+..|+..++ .+|+||+++ ++.+
T Consensus 12 G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 88 (317)
T cd07867 12 GTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWH 88 (317)
T ss_pred CCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHH
Confidence 4689999998653 4689999875432 1223445555433 256788765 6655
Q ss_pred cccc--------CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceee----cCCcceeecccccccccc
Q 041082 462 CLYS--------SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL----GNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 462 ~l~~--------~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill----~~~~~~~i~dfgla~~~~ 527 (639)
.+.. ....+++.....++.+++.||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 89 IIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 5431 1224788889999999999999999 6789999999999999 456789999999998764
No 343
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.58 E-value=6.1e-15 Score=152.84 Aligned_cols=217 Identities=22% Similarity=0.251 Sum_probs=133.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH-------------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK-------------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~-------------------------~Lv~ey~~~gs 458 (639)
+++|.+|++... .+..+++|.+.... ....+.+..++..++ .++++|++ ++
T Consensus 11 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~ 89 (330)
T cd07834 11 GAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TD 89 (330)
T ss_pred CCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hh
Confidence 457889999865 47899999876432 222334444443322 35678887 47
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCC-----C-
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQ-----S- 532 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~-----~- 532 (639)
|.+++... ..+++..+..++.+++.||+||| ..+|+||||||.||+++.++.++++|||++........ .
T Consensus 90 l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~ 165 (330)
T cd07834 90 LHKVIKSP-QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTE 165 (330)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccc
Confidence 87777643 36899999999999999999999 66899999999999999999999999999987654321 0
Q ss_pred --------ccc----c-ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCC------------Ccceee
Q 041082 533 --------FTQ----N-TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPI------------SVMEVV 578 (639)
Q Consensus 533 --------~~~----~-~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~------------~~~~~~ 578 (639)
.+. . ..+.++|+| | ||+.|....- .......+...... ...+.+
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 243 (330)
T cd07834 166 YVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD--YIDQLNLIVEVLGTPSEEDLKFITSEKARNYL 243 (330)
T ss_pred cccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHhcCCCChhHhhhccccchhhHH
Confidence 000 0 223368888 6 7877764321 11111111111100 000000
Q ss_pred eccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHhHH
Q 041082 579 DVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR--LLKIRD 630 (639)
Q Consensus 579 d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~--l~~~~~ 630 (639)
...-............+....+.+++.+|++.+|++||++.+++.. ++.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 244 KSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0000000000000001123467889999999999999999999974 555443
No 344
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.58 E-value=4.9e-15 Score=155.65 Aligned_cols=116 Identities=28% Similarity=0.312 Sum_probs=92.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..+...++ .+|+||+++|+|.++
T Consensus 54 G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (370)
T cd05621 54 GAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL 133 (370)
T ss_pred cCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 468899998865 478899999864321 12233445555432 378999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+... .++......++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+|+...
T Consensus 134 l~~~--~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 134 MSNY--DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred HHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 8643 4778888899999999999999 6789999999999999999999999999998764
No 345
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.58 E-value=3.2e-15 Score=157.16 Aligned_cols=117 Identities=24% Similarity=0.353 Sum_probs=94.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|++.... ......+..|..+++ .+|+||+++|+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~ 91 (364)
T cd05599 12 GAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTL 91 (364)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHH
Confidence 468899998864 57899999987542 122334455555533 268999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.++++|||+++.+.
T Consensus 92 l~~~-~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 92 LMKK-DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 8653 35888889999999999999999 6789999999999999999999999999987653
No 346
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.58 E-value=6.4e-15 Score=147.23 Aligned_cols=118 Identities=29% Similarity=0.385 Sum_probs=94.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.+|++... .+..+++|.+..... ...+.+..+....+ .+++||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (262)
T cd05572 4 GGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTI 83 (262)
T ss_pred CCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHH
Confidence 357889999875 378999998864332 22344555555432 378999999999999
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+... ..+++..+..++.+++.||+|+| +.+++|+|||++||+++.++.++++|||+++....
T Consensus 84 l~~~-~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 84 LRDR-GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred Hhhc-CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 8753 34788999999999999999999 67899999999999999999999999999987654
No 347
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.58 E-value=1.8e-14 Score=151.10 Aligned_cols=116 Identities=24% Similarity=0.378 Sum_probs=92.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+.... ......+..|..++. .+|+||+++|+|.++
T Consensus 12 G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (360)
T cd05627 12 GAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTL 91 (360)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHH
Confidence 468899998764 57899999986432 122234444544422 378999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+... ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.++++|||+++.+
T Consensus 92 l~~~-~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 92 LMKK-DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence 8643 35788888999999999999999 778999999999999999999999999998754
No 348
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.57 E-value=1.3e-14 Score=153.13 Aligned_cols=114 Identities=22% Similarity=0.339 Sum_probs=90.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..|.++++ .+||||+++|+|.++
T Consensus 12 G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~ 91 (376)
T cd05598 12 GAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (376)
T ss_pred CCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHH
Confidence 468899998754 578999999864321 22334555655532 268999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAK 524 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~ 524 (639)
+... ..++......++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+|.
T Consensus 92 i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 92 LIRL-GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 8653 34677777889999999999999 6789999999999999999999999999975
No 349
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.57 E-value=9e-15 Score=153.03 Aligned_cols=115 Identities=27% Similarity=0.309 Sum_probs=86.5
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------------~Lv~ey~~~g 457 (639)
.++|.||++.. ..+..+|+|.+.... ......+..|+..++ .+|+||+. +
T Consensus 27 g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~ 105 (353)
T cd07850 27 GAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-A 105 (353)
T ss_pred CCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-C
Confidence 46788999875 467899999875322 112223334444422 36677775 4
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+|.+.+.. .+++.+...++.++++||+||| ..+|+||||||+||+++.++.+|++|||+++....
T Consensus 106 ~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 106 NLCQVIQM---DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 67666543 2788888999999999999999 66899999999999999999999999999986643
No 350
>PTZ00284 protein kinase; Provisional
Probab=99.57 E-value=6.1e-15 Score=160.13 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=95.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHHh---------------------------hhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMKK---------------------------LVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~~---------------------------Lv~ey~~~gs 458 (639)
.+||.||++... .+..+|||+++.... ....+..|+..++. +|++++ +++
T Consensus 140 G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~ 217 (467)
T PTZ00284 140 GTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPC 217 (467)
T ss_pred ccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCC
Confidence 468999999764 578899999853211 11222223322211 344444 456
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc----------------ceeeccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM----------------VAHLSDFGM 522 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~----------------~~~i~dfgl 522 (639)
|.+++... ..+++.....|+.+++.||+|||+. .+|+||||||+|||++.++ .+||+|||.
T Consensus 218 l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~ 294 (467)
T PTZ00284 218 LLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGG 294 (467)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCc
Confidence 76666532 3588999999999999999999942 4799999999999998765 489999998
Q ss_pred cccccccCCC--------ccc----cccccccccc--c-------CCCCCCCc
Q 041082 523 AKLLLKEDQS--------FTQ----NTNTCHHRIY--G-------TRRNPQMN 554 (639)
Q Consensus 523 a~~~~~~~~~--------~~~----~~~~~~~dvy--G-------tg~~p~~~ 554 (639)
+......... .+. ...+.++||| | ||+.|.+.
T Consensus 295 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 295 CCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred cccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7643222111 000 1122368999 7 89988753
No 351
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.56 E-value=8.5e-15 Score=148.80 Aligned_cols=119 Identities=30% Similarity=0.372 Sum_probs=95.3
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.+|++... .+..+++|.+..... .....+..|++.++ .+|+||+++|+|.++
T Consensus 12 g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 91 (290)
T cd05580 12 GSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSH 91 (290)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHH
Confidence 467889988864 578999998864321 22344555655533 268999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
+... ..+++..+..++.+++.||+||| ..+++||||+|+||+++.++.+|++|||+++.....
T Consensus 92 ~~~~-~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 92 LRKS-GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred HHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 8653 45889999999999999999999 678999999999999999999999999999876443
No 352
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.56 E-value=4.2e-15 Score=151.30 Aligned_cols=149 Identities=19% Similarity=0.245 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-------ccccccc--
Q 041082 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-------TQNTNTC-- 540 (639)
Q Consensus 470 l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-------~~~~~~~-- 540 (639)
.++.....|+.++++||+||| ..+|+||||||+||+++.++.++++|||+|+.+....... ....++.
T Consensus 123 ~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y 199 (294)
T PHA02882 123 KNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYY 199 (294)
T ss_pred CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccc
Confidence 467778899999999999999 6789999999999999999999999999998664321100 0000110
Q ss_pred -ccccc-cCCCCCCCccCCCccchHHHHHhhCCCCcc----eee-----e--ccccccccccccchHHHHHHHHHHHhhc
Q 041082 541 -HHRIY-GTRRNPQMNFFSGEMTLKSWVNDLLPISVM----EVV-----D--VNLLSMEDKYFTTKKQCLSFVFNLAMEC 607 (639)
Q Consensus 541 -~~dvy-Gtg~~p~~~~~~~~~~l~~~~~~~~~~~~~----~~~-----d--~~l~~~~~~~~~~~~~~~~~~~~l~~~C 607 (639)
..+++ |..-.+..|+|+-|..+.+|+....|.... +.+ | ..+... . .....+...+.+++..|
T Consensus 200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~ 275 (294)
T PHA02882 200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEG-K---IKIKNANKFIYDFIECV 275 (294)
T ss_pred cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhh-h---hccCCCCHHHHHHHHHH
Confidence 00111 111112223333344444444333332110 000 0 000000 0 00122345677888899
Q ss_pred cCCCCCCCCCHHHHHHHH
Q 041082 608 TAESPKQRINAKESVTRL 625 (639)
Q Consensus 608 ~~~~p~~RP~m~~v~~~l 625 (639)
+..+|++||++.++++.+
T Consensus 276 ~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 276 TKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhCCCCCCCCHHHHHHhh
Confidence 999999999999999875
No 353
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=1.2e-14 Score=151.17 Aligned_cols=194 Identities=25% Similarity=0.342 Sum_probs=127.3
Q ss_pred cCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccCC
Q 041082 409 FGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSSN 467 (639)
Q Consensus 409 ~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~~ 467 (639)
+|.||.++-. .....|||-+...+.+..+-...|+...+ ++.||-+|+|||.++|+..=
T Consensus 588 YG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskW 667 (1226)
T KOG4279|consen 588 YGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKW 667 (1226)
T ss_pred eeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhcc
Confidence 7889988744 34667888876555444444444444311 25689999999999998633
Q ss_pred ccC--CHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-CcceeeccccccccccccC---CCccc------
Q 041082 468 YIL--DIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLKED---QSFTQ------ 535 (639)
Q Consensus 468 ~~l--~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~~~---~~~~~------ 535 (639)
.++ ...+.--+..+|.+||.||| ...|||||||-.|||+.. .+.+||+|||-++-+..-. ...+.
T Consensus 668 GPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMA 744 (1226)
T KOG4279|consen 668 GPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMA 744 (1226)
T ss_pred CCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhC
Confidence 334 34455667789999999999 778999999999999975 8999999999887553211 00000
Q ss_pred -------cc-cccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 536 -------NT-NTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 536 -------~~-~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
.. ....+|+| | |||+|.-+. |- ++. .++.-++ -.+.| +.+++-..
T Consensus 745 PEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El---gs--pqA--AMFkVGm-yKvHP----------~iPeelsa 806 (1226)
T KOG4279|consen 745 PEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL---GS--PQA--AMFKVGM-YKVHP----------PIPEELSA 806 (1226)
T ss_pred hHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec---CC--hhH--hhhhhcc-eecCC----------CCcHHHHH
Confidence 00 11267888 6 888886532 10 000 0111111 11122 33455566
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+.-..+++|-+++|.+||++.+.++
T Consensus 807 eak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 807 EAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHcCCCcccCccHHHhcc
Confidence 7788999999999999999999874
No 354
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.56 E-value=2e-15 Score=147.54 Aligned_cols=182 Identities=19% Similarity=0.226 Sum_probs=124.6
Q ss_pred hhhhcCCCCCchhccc-----c--CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccc
Q 041082 449 LVLEYMPHGSLEKCLY-----S--SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFG 521 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~-----~--~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfg 521 (639)
..|.|+.-|+|..+|. + ....++-.+.+.+|.|+|.|++||| ..+|+|.||-++|.++|+...+|++|-.
T Consensus 365 V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsa 441 (563)
T KOG1024|consen 365 VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSA 441 (563)
T ss_pred EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccch
Confidence 4578888899988886 2 2234666788999999999999999 7889999999999999999999999999
Q ss_pred ccccccccCCCc-ccccccc-ccccc-c---CCCCCCCccCCCccchHHHHHh-hCCCCcceeeeccc---ccccccccc
Q 041082 522 MAKLLLKEDQSF-TQNTNTC-HHRIY-G---TRRNPQMNFFSGEMTLKSWVND-LLPISVMEVVDVNL---LSMEDKYFT 591 (639)
Q Consensus 522 la~~~~~~~~~~-~~~~~~~-~~dvy-G---tg~~p~~~~~~~~~~l~~~~~~-~~~~~~~~~~d~~l---~~~~~~~~~ 591 (639)
++|-+.+.++.. ....... |+-.. . .-.+...|+|+.|+.+|+..+. ..|.. .+||.- .-.++++..
T Consensus 442 LSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya---eIDPfEm~~ylkdGyRla 518 (563)
T KOG1024|consen 442 LSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA---EIDPFEMEHYLKDGYRLA 518 (563)
T ss_pred hccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc---ccCHHHHHHHHhccceec
Confidence 999887776541 1000000 00000 0 1111222344455555554432 11221 123211 112234555
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHHHHHhh
Q 041082 592 TKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIRDLLLKNV 636 (639)
Q Consensus 592 ~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~~~~~~ 636 (639)
.+-+|..+++.++..||+..|++||++.|++.-|.++...+.++|
T Consensus 519 QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~YV 563 (563)
T KOG1024|consen 519 QPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTRYV 563 (563)
T ss_pred CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhhcC
Confidence 677899999999999999999999999999999998876665543
No 355
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.56 E-value=8.1e-15 Score=154.04 Aligned_cols=115 Identities=25% Similarity=0.288 Sum_probs=86.1
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------------~Lv~ey~~~g 457 (639)
.++|.||++.-. .+..+|+|++.... ......+..|+..++ .+|+||+++
T Consensus 35 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~- 113 (364)
T cd07875 35 GAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA- 113 (364)
T ss_pred CCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-
Confidence 468899988753 57889999886432 112223333433321 367888865
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
++...+. ..+++.+...++.++++||+||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 114 ~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 114 NLCQVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred CHHHHHH---hcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 5655553 24788889999999999999999 67899999999999999999999999999986543
No 356
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.55 E-value=7.7e-15 Score=148.90 Aligned_cols=200 Identities=22% Similarity=0.293 Sum_probs=123.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh-hhhhhHHHHHHHHHh---------------------hhhhcCCCCCchh--
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE-RAFKSFDVACDMMKK---------------------LVLEYMPHGSLEK-- 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~-~~~~~f~~e~~~~~~---------------------Lv~ey~~~gsL~~-- 461 (639)
.++|.||++... .+..+|+|.+..... .....+..|+..+.. +++||++. ++.+
T Consensus 15 G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~ 93 (288)
T cd06616 15 GAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFY 93 (288)
T ss_pred CCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHH
Confidence 457889988764 578999998864332 223344455544322 34566553 3333
Q ss_pred -cccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-------
Q 041082 462 -CLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS------- 532 (639)
Q Consensus 462 -~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~------- 532 (639)
.+.. ....+++....+++.+++.||+|||+ ..+++||||||+||+++.++.++++|||+++.+......
T Consensus 94 ~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 171 (288)
T cd06616 94 KYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCR 171 (288)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCcc
Confidence 2222 22458889999999999999999995 347999999999999999999999999999765432110
Q ss_pred ---ccc-------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccch
Q 041082 533 ---FTQ-------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 533 ---~~~-------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
.+. ...+.++||| | ||+.|.... ....+-+...... ..+.+.. ...
T Consensus 172 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~----~~~~~~~~~~~~~-----~~~~~~~------~~~ 236 (288)
T cd06616 172 PYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW----NSVFDQLTQVVKG-----DPPILSN------SEE 236 (288)
T ss_pred CccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc----chHHHHHhhhcCC-----CCCcCCC------cCC
Confidence 000 0122356666 5 566664321 0111111111100 0011111 011
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
......+.+++.+|++.+|++||++.+|++.
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 237 REFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2234467889999999999999999999863
No 357
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.55 E-value=1.2e-14 Score=148.38 Aligned_cols=118 Identities=31% Similarity=0.415 Sum_probs=97.3
Q ss_pred CcCcceEEEecC-CceeeeEEechhhh--hhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYE--RAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~--~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~ 464 (639)
.||.||||+-.+ .+.||+|.++.... ...+....|+++++. +|.||+.+ +|..+|.
T Consensus 14 sfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~ 92 (808)
T KOG0597|consen 14 SFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILE 92 (808)
T ss_pred ccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHH
Confidence 478999998754 68999999875532 234556677777543 57889877 9988886
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
. +..+...+...||.+...||.||| +.+|+|||+||.|||+++.+.+|+||||+||......
T Consensus 93 ~-d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 93 Q-DGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred h-ccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 4 456899999999999999999999 8899999999999999999999999999999876544
No 358
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.55 E-value=1.3e-14 Score=151.02 Aligned_cols=209 Identities=21% Similarity=0.237 Sum_probs=127.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH--------------------------hhhhhcCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK--------------------------KLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~--------------------------~Lv~ey~~~g 457 (639)
+++|.||++.. .++..+|+|.+.... ......+..|+..++ .+|++|+ ++
T Consensus 26 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 104 (343)
T cd07880 26 GAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GT 104 (343)
T ss_pred cCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CC
Confidence 45788999874 468899999875322 112233444544432 2566776 55
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----- 532 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----- 532 (639)
+|.+++.. ..+++.....++.++++|++||| ..+|+||||||+||+++.++.++++|||+++........
T Consensus 105 ~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 179 (343)
T cd07880 105 DLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTR 179 (343)
T ss_pred CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCC
Confidence 77766643 35889999999999999999999 678999999999999999999999999999865432211
Q ss_pred ---ccc-----cccccccccc--c-------CCCCCCCccCCCc----------cchHHHHHhhCCCCcceeee--cccc
Q 041082 533 ---FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGE----------MTLKSWVNDLLPISVMEVVD--VNLL 583 (639)
Q Consensus 533 ---~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~----------~~l~~~~~~~~~~~~~~~~d--~~l~ 583 (639)
.+. ...+.++|+| | +|+.|....-... ....+|.............. +...
T Consensus 180 ~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (343)
T cd07880 180 WYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFR 259 (343)
T ss_pred cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccC
Confidence 000 1123478898 6 7887765311000 00011111110000000000 0000
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
... .....+.+...+.++..+|++.+|++|||+.++++
T Consensus 260 ~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 260 KKD--FRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred cch--HHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00000122335778999999999999999999984
No 359
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.54 E-value=2e-14 Score=149.30 Aligned_cols=116 Identities=23% Similarity=0.306 Sum_probs=89.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhh--------------hhhHHHHHHHHH--------------------hhhh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERA--------------FKSFDVACDMMK--------------------KLVL 451 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~--------------~~~f~~e~~~~~--------------------~Lv~ 451 (639)
+++|.||++... .+..+|+|.+....... ...+..|++.++ .+|+
T Consensus 20 G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 99 (335)
T PTZ00024 20 GTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVM 99 (335)
T ss_pred CCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEE
Confidence 468899999854 68899999875432211 012344554432 2678
Q ss_pred hcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 452 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
||++ |+|.+++.. ...+++.....++.+++.||+||| ..+++|||||++||+++.++.++++|||+++...
T Consensus 100 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 100 DIMA-SDLKKVVDR-KIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYG 170 (335)
T ss_pred eccc-cCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccceeecc
Confidence 8986 688887753 234788889999999999999999 6789999999999999999999999999997654
No 360
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.54 E-value=1e-14 Score=154.00 Aligned_cols=115 Identities=24% Similarity=0.345 Sum_probs=92.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. ..+..+|+|++.... ......+..|.++++ .+|+||+++|+|.++
T Consensus 12 G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (377)
T cd05629 12 GAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTM 91 (377)
T ss_pred cCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHH
Confidence 46889999875 467899999886432 122344555555532 378999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+.. ...+++.....++.+++.||+||| ..+|+||||||+||+++.++.+|++|||+++.
T Consensus 92 l~~-~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~ 150 (377)
T cd05629 92 LIK-YDTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTG 150 (377)
T ss_pred HHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccc
Confidence 864 345778888889999999999999 67899999999999999999999999999963
No 361
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.54 E-value=1.5e-14 Score=145.96 Aligned_cols=118 Identities=25% Similarity=0.315 Sum_probs=93.4
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. ..|..+++|.+..... .....+..|+.+++ .+|+||+++++|.++
T Consensus 4 g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 83 (277)
T cd05577 4 GGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYH 83 (277)
T ss_pred CCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHH
Confidence 46789998875 4678999998864322 12233444555532 378999999999988
Q ss_pred cccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+.... ..+++..+..++.+++.|+.||| ..+++|||||++||+++.++.++++|||+++...
T Consensus 84 l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~ 146 (277)
T cd05577 84 IYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELK 146 (277)
T ss_pred HHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence 86533 35899999999999999999999 6689999999999999999999999999987654
No 362
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.54 E-value=1.6e-14 Score=144.22 Aligned_cols=151 Identities=21% Similarity=0.279 Sum_probs=101.4
Q ss_pred hhhhcCCCCCchhcccc---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 449 LVLEYMPHGSLEKCLYS---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+|+||+++++|.+++.. ....+++..+..++.+++.|+.||| ..+++|+|||++||+++. ..++++|||+++.
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceee
Confidence 68999999999988763 3356899999999999999999999 678999999999999975 5599999999876
Q ss_pred ccccCCCc-c----------c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecc
Q 041082 526 LLKEDQSF-T----------Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVN 581 (639)
Q Consensus 526 ~~~~~~~~-~----------~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 581 (639)
........ . . ...+.++|+| | +|+.|..+ ....+......... .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~-----~~- 223 (260)
T cd08222 155 LMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG-----QNFLSVVLRIVEGP-----TP- 223 (260)
T ss_pred cCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC-----ccHHHHHHHHHcCC-----CC-
Confidence 64322110 0 0 0011245666 4 45544421 11111111111000 00
Q ss_pred ccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 582 LLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 582 l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
..+......+.+++.+|+..+|++||++.|+++
T Consensus 224 ---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 ---------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 011223346778889999999999999999975
No 363
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.54 E-value=1.8e-14 Score=151.43 Aligned_cols=116 Identities=28% Similarity=0.307 Sum_probs=91.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|.+..... .....+..+...++ .+|+||+++|+|.++
T Consensus 54 G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~ 133 (371)
T cd05622 54 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 133 (371)
T ss_pred cCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHH
Confidence 468899998865 568899998864321 12233444554432 368999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+... .++......++.+++.||+||| ..+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 134 ~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 134 MSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred HHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 8643 4677777889999999999999 7789999999999999999999999999998664
No 364
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.54 E-value=1.7e-14 Score=150.26 Aligned_cols=209 Identities=19% Similarity=0.211 Sum_probs=127.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh--hhhhhhHHHHHHHH--------------------------HhhhhhcCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY--ERAFKSFDVACDMM--------------------------KKLVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~--~~~~~~f~~e~~~~--------------------------~~Lv~ey~~~g 457 (639)
.++|.+|++... ++..+++|++.... ......+..++..+ ..+|+||+ ++
T Consensus 26 g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~ 104 (343)
T cd07851 26 GAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GA 104 (343)
T ss_pred CCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CC
Confidence 467899999875 57889999876422 11112232333331 23566776 45
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----- 532 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----- 532 (639)
+|.+++.. ..+++.....++.++++|++||| ..+|+||||||+||+++.++.++++|||++.........
T Consensus 105 ~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 179 (343)
T cd07851 105 DLNNIVKC--QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATR 179 (343)
T ss_pred CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccc
Confidence 88777754 35899999999999999999999 678999999999999999999999999999865432111
Q ss_pred ---ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCC------------cceeeecccc
Q 041082 533 ---FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPIS------------VMEVVDVNLL 583 (639)
Q Consensus 533 ---~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~------------~~~~~d~~l~ 583 (639)
.+. ...+.++||| | ||+.|.... .............+.. ....+.....
T Consensus 180 ~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (343)
T cd07851 180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS--DHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQ 257 (343)
T ss_pred cccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccc
Confidence 010 1123478998 6 888776431 1110001000101000 0000000000
Q ss_pred ccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 584 SMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
................+.+++.+|++.+|++|||+.||++
T Consensus 258 ~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 258 MPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred cCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000000112346788999999999999999999975
No 365
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.54 E-value=1e-14 Score=143.57 Aligned_cols=116 Identities=16% Similarity=0.049 Sum_probs=87.9
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHH----------------HHhhhhhcCCCCCchhccccCCcc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDM----------------MKKLVLEYMPHGSLEKCLYSSNYI 469 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~----------------~~~Lv~ey~~~gsL~~~l~~~~~~ 469 (639)
..++.||++.- .++..+++|++........ ........ ...+|+||+++|+|.+++... ..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~ 81 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSR-ERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF-LN 81 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhhhh-HHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh-cC
Confidence 34677888765 4678999999865431110 00000000 123789999999999888643 34
Q ss_pred CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 470 l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+++.....++.+++.||+|+| ..+|+||||||+||+++.++.++++|||.+....
T Consensus 82 l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~ 136 (237)
T cd05576 82 IPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE 136 (237)
T ss_pred CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccc
Confidence 899999999999999999999 6789999999999999999999999999876554
No 366
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.53 E-value=2.3e-14 Score=141.98 Aligned_cols=118 Identities=33% Similarity=0.390 Sum_probs=93.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.+|++... .+..+++|.+...... ....+..+++.++ .+||||+++++|.++
T Consensus 4 G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 83 (250)
T cd05123 4 GSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSH 83 (250)
T ss_pred CCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHH
Confidence 457889988865 4789999987654321 2234444444422 368899999999988
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+... ..+++.....++.++++|+.|+| ..+++|+||||+||+++.++.++++|||++.....
T Consensus 84 l~~~-~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 84 LSKE-GRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence 8653 35899999999999999999999 67899999999999999999999999999876644
No 367
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.53 E-value=1.9e-14 Score=152.31 Aligned_cols=115 Identities=23% Similarity=0.341 Sum_probs=91.6
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh---hhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY---ERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~---~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++.. ..+..+|+|.+.... ......+..|..+++ .+||||+++|+|.++
T Consensus 12 G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~ 91 (382)
T cd05625 12 GAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSL 91 (382)
T ss_pred CCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHH
Confidence 46889999975 457889999986542 122344555655532 378999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+... ..++......++.+++.||+||| ..+|+||||||+|||++.++.+||+|||+++.
T Consensus 92 l~~~-~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~ 150 (382)
T cd05625 92 LIRM-GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 150 (382)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence 8653 34677777889999999999999 66899999999999999999999999999753
No 368
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.53 E-value=1.5e-14 Score=160.71 Aligned_cols=117 Identities=30% Similarity=0.430 Sum_probs=90.3
Q ss_pred cCcceEEE-ecCCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 409 FGSIYKAR-IQDGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 409 ~g~vy~~~-l~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
||.||-+. +..|...|+|-+..+.. ..++....|+..+. .+.|||+++|+|++.+..
T Consensus 1248 fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~ 1327 (1509)
T KOG4645|consen 1248 FGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEH 1327 (1509)
T ss_pred eeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHh
Confidence 88999887 45688889987765443 34455556665532 367999999999998864
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
+ ...+...-..+..+++.|++||| ..+|||||||+.||+||..+-.|.+|||.|+-+...
T Consensus 1328 g-ri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1328 G-RIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred c-chhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 3 23444444456788999999999 778999999999999999999999999999876543
No 369
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.53 E-value=4.4e-14 Score=145.48 Aligned_cols=115 Identities=23% Similarity=0.335 Sum_probs=84.5
Q ss_pred CCcCcceEEEec---CCceeeeEEechhhhhhhhhHHHHHHHHHh----------------------hhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ---DGMKVAVKVFDLQYERAFKSFDVACDMMKK----------------------LVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~---~g~~vavK~l~~~~~~~~~~f~~e~~~~~~----------------------Lv~ey~~~gsL~~ 461 (639)
.++|.||++... .+..+|+|.+.... ....+..|+..++. +++||+.+ ++.+
T Consensus 12 G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~ 88 (317)
T cd07868 12 GTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWH 88 (317)
T ss_pred CCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHH
Confidence 468899999864 45789999875432 12234445544322 46777754 6666
Q ss_pred cccc--------CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceee----cCCcceeecccccccccc
Q 041082 462 CLYS--------SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL----GNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 462 ~l~~--------~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill----~~~~~~~i~dfgla~~~~ 527 (639)
++.. ....+++.....++.+++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+...
T Consensus 89 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 89 IIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 5532 1124788888999999999999999 6679999999999999 456789999999998764
No 370
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.52 E-value=3e-14 Score=147.76 Aligned_cols=116 Identities=23% Similarity=0.345 Sum_probs=84.8
Q ss_pred CCcCcceEEEec-C--CceeeeEEechhhhh--hhhhHHHHHHHHHh-------------------------hhhhcCCC
Q 041082 407 SGFGSIYKARIQ-D--GMKVAVKVFDLQYER--AFKSFDVACDMMKK-------------------------LVLEYMPH 456 (639)
Q Consensus 407 ~g~g~vy~~~l~-~--g~~vavK~l~~~~~~--~~~~f~~e~~~~~~-------------------------Lv~ey~~~ 456 (639)
+++|.||++... . +..+|+|.+...... ..+.+..|+..++. ++++|+.
T Consensus 11 G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~- 89 (332)
T cd07857 11 GAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME- 89 (332)
T ss_pred cCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-
Confidence 467889998865 3 678999987643211 12233334433221 2334554
Q ss_pred CCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 457 GSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 457 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
++|.+++.. ...+++..+..++.+++.||+||| ..+++||||||+||+++.++.++|+|||+++.+.
T Consensus 90 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 90 ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 577776653 345889999999999999999999 6679999999999999999999999999997654
No 371
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.52 E-value=2.7e-14 Score=147.74 Aligned_cols=211 Identities=21% Similarity=0.252 Sum_probs=129.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~ 462 (639)
+++|.||++.- ..+..+++|.+.... ....+.+..|+..++ .+++||+ +++|.+.
T Consensus 21 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~ 99 (328)
T cd07856 21 GAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRL 99 (328)
T ss_pred cCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHH
Confidence 56889999874 478899999875322 122344545555432 2577887 4578777
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC--------cc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS--------FT 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~--------~~ 534 (639)
+.. ..+++.....++.+++.||+||| ..+|+||||||+||+++.++.++++|||+++........ .+
T Consensus 100 ~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aP 174 (328)
T cd07856 100 LTS--RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAP 174 (328)
T ss_pred Hhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCc
Confidence 653 34678878889999999999999 678999999999999999999999999998765332111 01
Q ss_pred c-----cccccccccc--c-------CCCCCCCccCCC----------ccchHHHHHhhCCCCcceeeecccccccc-cc
Q 041082 535 Q-----NTNTCHHRIY--G-------TRRNPQMNFFSG----------EMTLKSWVNDLLPISVMEVVDVNLLSMED-KY 589 (639)
Q Consensus 535 ~-----~~~~~~~dvy--G-------tg~~p~~~~~~~----------~~~l~~~~~~~~~~~~~~~~d~~l~~~~~-~~ 589 (639)
. ...+.++|+| | ||+.|....... +.-..+|.......+..+.+. .+..... ..
T Consensus 175 E~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 253 (328)
T cd07856 175 EIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ-SLPKREPVPF 253 (328)
T ss_pred eeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh-hccccCCCcH
Confidence 1 1223478888 6 888776432100 000111221111111011100 0000000 00
Q ss_pred ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 590 FTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 590 ~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+..+.....+.+++.+|++.+|++||++.+++..
T Consensus 254 ~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 254 SEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00001123567788999999999999999999764
No 372
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.52 E-value=4.2e-14 Score=145.08 Aligned_cols=117 Identities=30% Similarity=0.422 Sum_probs=87.8
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhh--hhhhHHHHHHHHH----------------------------hhhhhcCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYER--AFKSFDVACDMMK----------------------------KLVLEYMP 455 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~--~~~~f~~e~~~~~----------------------------~Lv~ey~~ 455 (639)
.++|.||++... ++..+++|.+...... ....+..|++.++ .+|++|+.
T Consensus 19 g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~ 98 (311)
T cd07866 19 GTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD 98 (311)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC
Confidence 457889999864 5788999987543321 1123334444422 24567776
Q ss_pred CCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 456 HGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 456 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
. ++...+......+++.+...++.++++||+||| ..+++||||||+||+++.++.++++|||+++...
T Consensus 99 ~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 99 H-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred c-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 4 566655544456899999999999999999999 6689999999999999999999999999998654
No 373
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.52 E-value=3.5e-14 Score=147.00 Aligned_cols=195 Identities=22% Similarity=0.284 Sum_probs=135.3
Q ss_pred CcCcceEEEecC-CceeeeEEechhhhhh---hhhHHHHHHHHHh---------------------hhhhcCCCCCchhc
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYERA---FKSFDVACDMMKK---------------------LVLEYMPHGSLEKC 462 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~~~---~~~f~~e~~~~~~---------------------Lv~ey~~~gsL~~~ 462 (639)
.||.||++.-.. |..+|+|.+....... ......|+.+++. +|+|++.+|.|.+.
T Consensus 47 ~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~ 126 (382)
T KOG0032|consen 47 QFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDR 126 (382)
T ss_pred CceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHH
Confidence 478999998765 8999999987655432 3467777777543 68999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC----cceeeccccccccccccCCCc----c
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN----MVAHLSDFGMAKLLLKEDQSF----T 534 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~----~~~~i~dfgla~~~~~~~~~~----~ 534 (639)
+... .++......++.+++.|+.|+| ..+|+|||+||+|+|+... +..+++|||+|.......... +
T Consensus 127 i~~~--~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gt 201 (382)
T KOG0032|consen 127 IVKK--HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGT 201 (382)
T ss_pred HHHc--cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCC
Confidence 8654 3788888999999999999999 6899999999999999643 479999999999877622110 0
Q ss_pred ------c----cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHH
Q 041082 535 ------Q----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQ 595 (639)
Q Consensus 535 ------~----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 595 (639)
. ...+...|+| | +|.+|..+.-..+..+ . +...-.++ ..+..+.
T Consensus 202 p~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~-----i~~~~~~f-----------~~~~w~~ 264 (382)
T KOG0032|consen 202 PEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-A-----ILRGDFDF-----------TSEPWDD 264 (382)
T ss_pred ccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-H-----HHcCCCCC-----------CCCCccc
Confidence 0 0112267777 5 7777765321111111 0 00000001 0111233
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 596 CLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 596 ~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
....+-++...++..+|.+|+|..++++.
T Consensus 265 is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 265 ISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred cCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 34456677889999999999999999974
No 374
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.50 E-value=6e-14 Score=150.27 Aligned_cols=77 Identities=27% Similarity=0.285 Sum_probs=66.4
Q ss_pred hhhhhcCCCCCchhccccCC-----------------------ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCC
Q 041082 448 KLVLEYMPHGSLEKCLYSSN-----------------------YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKL 504 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~ 504 (639)
.|||||+++|+|.++++... ..++|..+..|+.+++.||+|+| ..+|+||||||
T Consensus 261 ~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp 337 (507)
T PLN03224 261 WLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKP 337 (507)
T ss_pred EEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCch
Confidence 48999999999998886411 13467888999999999999999 66799999999
Q ss_pred CceeecCCcceeecccccccccc
Q 041082 505 SNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 505 ~nill~~~~~~~i~dfgla~~~~ 527 (639)
+||+++.++.+||+|||+++...
T Consensus 338 ~NILl~~~~~~kL~DFGla~~~~ 360 (507)
T PLN03224 338 ENLLVTVDGQVKIIDFGAAVDMC 360 (507)
T ss_pred HhEEECCCCcEEEEeCcCccccc
Confidence 99999999999999999997643
No 375
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.49 E-value=7.7e-14 Score=145.27 Aligned_cols=210 Identities=21% Similarity=0.255 Sum_probs=125.0
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHHh--------------------------hhhhcCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMKK--------------------------LVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~~--------------------------Lv~ey~~~g 457 (639)
.++|.||++.. ..|..+|+|.+.... ......+..++..++. +|+||+..
T Consensus 26 g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~- 104 (342)
T cd07879 26 GAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT- 104 (342)
T ss_pred cCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-
Confidence 45788999885 468899999875322 1122334445544332 34455432
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC-----
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----- 532 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----- 532 (639)
++..+. ...+++.....++.++++||+||| ..+++||||||+||+++.++.++++|||+++........
T Consensus 105 ~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 178 (342)
T cd07879 105 DLQKIM---GHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 178 (342)
T ss_pred CHHHHH---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeee
Confidence 443332 124788889999999999999999 667999999999999999999999999999865332111
Q ss_pred ---ccc-----cccccccccc--c-------CCCCCCCccCCCccchHHHH--HhhCCCC---cceeee-----------
Q 041082 533 ---FTQ-----NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWV--NDLLPIS---VMEVVD----------- 579 (639)
Q Consensus 533 ---~~~-----~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~--~~~~~~~---~~~~~d----------- 579 (639)
.+. ...+.++||| | +|+.|.... ..+..+. ....+.. ..+.++
T Consensus 179 ~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (342)
T cd07879 179 WYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK----DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSL 254 (342)
T ss_pred cccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhc
Confidence 011 1123478998 6 888876531 1111110 0000000 000000
Q ss_pred ccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHhH
Q 041082 580 VNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR--LLKIR 629 (639)
Q Consensus 580 ~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~--l~~~~ 629 (639)
+...... .....+.....+.+++.+|++.+|++||++.||+.. ++..+
T Consensus 255 ~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 255 PKYPRKD--FSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred CCcccch--HHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000000 000000122346789999999999999999999854 44443
No 376
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.48 E-value=1.2e-13 Score=138.36 Aligned_cols=116 Identities=27% Similarity=0.424 Sum_probs=91.5
Q ss_pred CCcCcceEEEec-CCceeeeEEechhh-----hhhhhhHHHHHHHHH----------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQY-----ERAFKSFDVACDMMK----------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~-----~~~~~~f~~e~~~~~----------------------~Lv~ey~~~gs 458 (639)
.++|.+|++... .+..+++|.+.... ......+..|++.++ .+++||+++++
T Consensus 13 g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (264)
T cd06653 13 GAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGS 92 (264)
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCc
Confidence 457889998864 57899999874321 122345566665532 25789999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
|.+++... ..+++....+++.+++.|++||| ..+++||||||+||+++.++.++++|||+++..
T Consensus 93 L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 93 IKDQLKAY-GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 98887643 34788888999999999999999 667999999999999999999999999999764
No 377
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.48 E-value=7.5e-14 Score=140.81 Aligned_cols=118 Identities=33% Similarity=0.473 Sum_probs=93.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH---------------------hhhhhcCCCCCchh
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK---------------------KLVLEYMPHGSLEK 461 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~ 461 (639)
.++|.+|++... ++..+++|++..+.. .....+..+..+++ .+|+||+++++|.+
T Consensus 12 g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (280)
T cd05581 12 GSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQ 91 (280)
T ss_pred CCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHH
Confidence 467889999865 688999999865321 11233333333321 26789999999999
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
++... ..++|.....|+.+++.||+||| ..+++|+|||++||+++.++.++++|||++.....
T Consensus 92 ~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 92 YIRKY-GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred HHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 88653 36899999999999999999999 66799999999999999999999999999986654
No 378
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=6.7e-14 Score=144.30 Aligned_cols=213 Identities=22% Similarity=0.290 Sum_probs=142.5
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~ 465 (639)
..||.||++.-.+ +...|.|+++.....-..+|..+++++.. +..||+++|.....+-+
T Consensus 43 GAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlE 122 (1187)
T KOG0579|consen 43 GAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLE 122 (1187)
T ss_pred ccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHH
Confidence 4589999998654 45677788887777777778777776321 24588999988777665
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccccccccc---c
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCH---H 542 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~~---~ 542 (639)
-...|+..+..-++.++..||.||| +..|||||||+-|||++-||.++++|||.+.-............++.. .
T Consensus 123 L~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAP 199 (1187)
T KOG0579|consen 123 LGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAP 199 (1187)
T ss_pred hccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccc
Confidence 5567899999999999999999999 778999999999999999999999999997644322111111122221 1
Q ss_pred ccc--c-CCCCCCC---ccCCCccchHHHHHhhCCCC---cceeeeccccccccccccchHHHHHHHHHHHhhccCCCCC
Q 041082 543 RIY--G-TRRNPQM---NFFSGEMTLKSWVNDLLPIS---VMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPK 613 (639)
Q Consensus 543 dvy--G-tg~~p~~---~~~~~~~~l~~~~~~~~~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~ 613 (639)
.|. - ..-.|++ |+|+.|..|.+.+..--|+. .+.++- .+........-.+...-..+-++.-.|+..+|+
T Consensus 200 EVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll-KiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~ 278 (1187)
T KOG0579|consen 200 EVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-KIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPR 278 (1187)
T ss_pred hheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH-HHhhcCCCcccCcchhhhHHHHHHHHHHhcCCc
Confidence 111 0 2335554 45777888888776544442 122210 000000001111233455667777799999999
Q ss_pred CCCCHHHHHH
Q 041082 614 QRINAKESVT 623 (639)
Q Consensus 614 ~RP~m~~v~~ 623 (639)
.||+..++++
T Consensus 279 ~Rp~aaqll~ 288 (1187)
T KOG0579|consen 279 NRPPAAQLLK 288 (1187)
T ss_pred cCCCHHHHhh
Confidence 9999999884
No 379
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.47 E-value=8.9e-14 Score=130.08 Aligned_cols=201 Identities=20% Similarity=0.256 Sum_probs=115.9
Q ss_pred CcCcceEEEecC-CceeeeEEechhhhhh-hhhHHHHHHHH------Hh---------------hhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYERA-FKSFDVACDMM------KK---------------LVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~~~-~~~f~~e~~~~------~~---------------Lv~ey~~~gsL~~~l~ 464 (639)
..|.|++++... |...|||...-..+.. .+.+...++.+ .+ +-||.|.- -..+++.
T Consensus 104 tcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlk 182 (391)
T KOG0983|consen 104 TCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST-CAEKLLK 182 (391)
T ss_pred CccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHH
Confidence 357899998764 7899999886544321 12222222221 11 22333321 1222332
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcccccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQNTNTCHHRI 544 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~~~~~~~~dv 544 (639)
.....+...-.=++...+..||.||-+ ...|+|||+||+|||+|+.+++|+||||++..+.+...+. . ++-+..
T Consensus 183 rik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht-r---sAGC~~ 256 (391)
T KOG0983|consen 183 RIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT-R---SAGCAA 256 (391)
T ss_pred HhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccc-c---ccCCcc
Confidence 222334444445677788899999986 6689999999999999999999999999997766543221 0 111222
Q ss_pred c-c----CCC-CCC----CccCCCccchHHHHHhhCCCCc--c------eeee---ccccccccccccchHHHHHHHHHH
Q 041082 545 Y-G----TRR-NPQ----MNFFSGEMTLKSWVNDLLPISV--M------EVVD---VNLLSMEDKYFTTKKQCLSFVFNL 603 (639)
Q Consensus 545 y-G----tg~-~p~----~~~~~~~~~l~~~~~~~~~~~~--~------~~~d---~~l~~~~~~~~~~~~~~~~~~~~l 603 (639)
| + +.. .|. .|+|+.|..|++.++..+|... . .+++ |.+.+. ..-...+.++
T Consensus 257 YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~--------~gFSp~F~~f 328 (391)
T KOG0983|consen 257 YMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGH--------MGFSPDFQSF 328 (391)
T ss_pred ccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcc--------cCcCHHHHHH
Confidence 3 2 000 111 1334556666666665555431 1 1111 111111 0022345667
Q ss_pred HhhccCCCCCCCCCHHHHHH
Q 041082 604 AMECTAESPKQRINAKESVT 623 (639)
Q Consensus 604 ~~~C~~~~p~~RP~m~~v~~ 623 (639)
...|+..++.+||.-.+.++
T Consensus 329 v~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 329 VKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHhhcCcccCcchHHHhc
Confidence 77999999999999988775
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.46 E-value=3.6e-13 Score=144.65 Aligned_cols=193 Identities=24% Similarity=0.350 Sum_probs=136.2
Q ss_pred cCcceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHHHh--------------------------hhhhcCCCCCchh
Q 041082 409 FGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------------LVLEYMPHGSLEK 461 (639)
Q Consensus 409 ~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------------Lv~ey~~~gsL~~ 461 (639)
.|.||++. ...++.+|+|+.+..... ..+...|..+.+. ||||||.+||..+
T Consensus 32 ygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTD 110 (953)
T KOG0587|consen 32 YGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTD 110 (953)
T ss_pred ceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHH
Confidence 56788877 457889999998766443 2355555555332 8999999999999
Q ss_pred cccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-c-----
Q 041082 462 CLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-T----- 534 (639)
Q Consensus 462 ~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-~----- 534 (639)
++.. ....++|....-|+..+.+|+.+|| ...++|||+|-.||||+.++++|+.|||+++.++....-. +
T Consensus 111 LVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP 187 (953)
T KOG0587|consen 111 LVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTP 187 (953)
T ss_pred HHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCc
Confidence 8875 3456899988999999999999999 7889999999999999999999999999999886543110 0
Q ss_pred --------------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccccccccccc
Q 041082 535 --------------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFT 591 (639)
Q Consensus 535 --------------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 591 (639)
...-...+|+| | .|..|..|+.. ++..++... -=-|++ .
T Consensus 188 ~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP--------mraLF~IpR--NPPPkL--------k 249 (953)
T KOG0587|consen 188 YWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP--------MRALFLIPR--NPPPKL--------K 249 (953)
T ss_pred ccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch--------hhhhccCCC--CCCccc--------c
Confidence 01112267777 4 45555544321 112221100 001111 2
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 592 TKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 592 ~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.+...-.++-+.+..|+..+-.+||+|.+.++
T Consensus 250 rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 250 RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 24566778889999999999999999998874
No 381
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=2.2e-13 Score=139.19 Aligned_cols=194 Identities=22% Similarity=0.252 Sum_probs=127.1
Q ss_pred CCcCcceEEEecCCceeeeEEechh--hhhhhhhHHHHHHHHHh---------------------hhhhcCCCCCchhcc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQ--YERAFKSFDVACDMMKK---------------------LVLEYMPHGSLEKCL 463 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~--~~~~~~~f~~e~~~~~~---------------------Lv~ey~~~gsL~~~l 463 (639)
.|...||+....+...+|+|++.+. ..+....|..|+..+.+ +||||- ..+|.++|
T Consensus 372 GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL 450 (677)
T KOG0596|consen 372 GGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DIDLNKIL 450 (677)
T ss_pred CCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cccHHHHH
Confidence 3556789988887788888876443 24556778888877544 344543 34888888
Q ss_pred ccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCc-c-ccccc-
Q 041082 464 YSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSF-T-QNTNT- 539 (639)
Q Consensus 464 ~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~-~-~~~~~- 539 (639)
.... ...+|. +..+-.++..|+.++| ..+|||.||||.|+|+- +|..|+.|||+|..+..+..+. . ..++|
T Consensus 451 ~k~~~~~~~~~-lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~ 525 (677)
T KOG0596|consen 451 KKKKSIDPDWF-LKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTV 525 (677)
T ss_pred HhccCCCchHH-HHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcc
Confidence 7643 334574 5668899999999999 77899999999999885 5789999999999887665430 0 00111
Q ss_pred -------------------------cccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccccc
Q 041082 540 -------------------------CHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSM 585 (639)
Q Consensus 540 -------------------------~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 585 (639)
.++||| | -|+.|+.+ ..-.|++. ..+.||.-.-+
T Consensus 526 NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~------~~n~~aKl------~aI~~P~~~Ie 593 (677)
T KOG0596|consen 526 NYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ------IINQIAKL------HAITDPNHEIE 593 (677)
T ss_pred cccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH------HHHHHHHH------HhhcCCCcccc
Confidence 156666 5 45555432 11123332 23444432111
Q ss_pred ccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 586 EDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 586 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+.+..+ ...++++|-.|++++|++||+..|+++
T Consensus 594 fp~~~~-----~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 594 FPDIPE-----NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ccCCCC-----chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 111111 112788889999999999999999985
No 382
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.45 E-value=1.6e-13 Score=142.98 Aligned_cols=114 Identities=27% Similarity=0.392 Sum_probs=87.8
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHH----------------------------------hhhh
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMK----------------------------------KLVL 451 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~----------------------------------~Lv~ 451 (639)
+++|.||++.. ..|..+++|.+........+.+..|+++++ .+|+
T Consensus 16 g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 95 (342)
T cd07854 16 GSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQ 95 (342)
T ss_pred CCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEe
Confidence 46788999876 457899999886654444444555554422 2577
Q ss_pred hcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-Ccceeeccccccccc
Q 041082 452 EYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLL 526 (639)
Q Consensus 452 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~ 526 (639)
||++ ++|.+.+.. ..+++.....++.+++.||+||| ..+++|||||++||+++. +..++++|||+++.+
T Consensus 96 e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~ 165 (342)
T cd07854 96 EYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIV 165 (342)
T ss_pred eccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcccceec
Confidence 8886 477776643 34788889999999999999999 667999999999999984 567899999999765
No 383
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.45 E-value=4.1e-13 Score=128.58 Aligned_cols=118 Identities=39% Similarity=0.580 Sum_probs=94.3
Q ss_pred CcCcceEEEecC-CceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhcccc
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
++|.+|++.... +..+++|.+...... ....+..+++.++ .+++||+++++|.+++..
T Consensus 5 ~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~ 84 (215)
T cd00180 5 GFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKE 84 (215)
T ss_pred CceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHh
Confidence 467899988764 789999998765432 2244555555532 367899998999998865
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-Ccceeeccccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~ 528 (639)
....+++..+..++.+++++++||| ..+++|+||++.||+++. +..++++|||.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~ 145 (215)
T cd00180 85 NEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTS 145 (215)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccC
Confidence 4346899999999999999999999 568999999999999999 89999999999886543
No 384
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.44 E-value=5.5e-13 Score=124.60 Aligned_cols=151 Identities=17% Similarity=0.097 Sum_probs=101.2
Q ss_pred CCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCcc--
Q 041082 457 GSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFT-- 534 (639)
Q Consensus 457 gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~-- 534 (639)
|+|.++++.....++|.++..|+.++++||+|||+.. ||+||+++.++.+++ ||+++.........+
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~ 69 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPY 69 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccccCCCccc
Confidence 6888888754556999999999999999999999543 999999999999999 999987644321111
Q ss_pred --------ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHH
Q 041082 535 --------QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCL 597 (639)
Q Consensus 535 --------~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 597 (639)
....+.++||| | ||+.|..........+..+.....+.. +.-. .......
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~-------~~~~~~~ 136 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD------PRDR-------SNLESVS 136 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC------cccc-------ccHHHHH
Confidence 01123378998 7 888887543222222222222111110 0000 0011111
Q ss_pred --HHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHHH
Q 041082 598 --SFVFNLAMECTAESPKQRINAKESVTRLLKIRDL 631 (639)
Q Consensus 598 --~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~~~ 631 (639)
..+.+++.+|++.+|++||++.|+++.+..+...
T Consensus 137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 137 AARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 2588899999999999999999999998877543
No 385
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.44 E-value=3e-14 Score=131.13 Aligned_cols=193 Identities=21% Similarity=0.256 Sum_probs=117.9
Q ss_pred cCcceEEE-ecCCceeeeEEechhhh--hhhhhHHHHHHH--------------------HHhhhhhcCCCCCchhcccc
Q 041082 409 FGSIYKAR-IQDGMKVAVKVFDLQYE--RAFKSFDVACDM--------------------MKKLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 409 ~g~vy~~~-l~~g~~vavK~l~~~~~--~~~~~f~~e~~~--------------------~~~Lv~ey~~~gsL~~~l~~ 465 (639)
|..||+.. .+.|+..|+|.++.... ..++..++|..+ +.++|+|+|.+|+|..-+-.
T Consensus 24 FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~ 103 (355)
T KOG0033|consen 24 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 103 (355)
T ss_pred hHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHH
Confidence 44455443 35677777777654332 234555666555 33578999999988653322
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC---CcceeeccccccccccccCCCccccccc---
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN---NMVAHLSDFGMAKLLLKEDQSFTQNTNT--- 539 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~---~~~~~i~dfgla~~~~~~~~~~~~~~~~--- 539 (639)
+...+.....+...||..+|.|.| ..+|||||+||+|++|.. .-.+|++|||+|..+.+..... ..+++
T Consensus 104 -R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~-G~~GtP~f 178 (355)
T KOG0033|consen 104 -REFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWH-GFAGTPGY 178 (355)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccc-cccCCCcc
Confidence 123455566778899999999999 788999999999999953 3568999999999887433211 11111
Q ss_pred ------------cccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHHH
Q 041082 540 ------------CHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCLS 598 (639)
Q Consensus 540 ------------~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 598 (639)
...|+| | .|..|..+. + -.+++..-+.+.++.....+...-.
T Consensus 179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~-----~------------~~rlye~I~~g~yd~~~~~w~~is~ 241 (355)
T KOG0033|consen 179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----D------------QHRLYEQIKAGAYDYPSPEWDTVTP 241 (355)
T ss_pred cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc-----c------------HHHHHHHHhccccCCCCcccCcCCH
Confidence 145555 3 566665420 1 1111111112222211112222233
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 599 FVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 599 ~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
...++..+.+..+|++|-|+.|++.
T Consensus 242 ~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 242 EAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHHHHHHHhccChhhhccHHHHhC
Confidence 4456677888899999999998873
No 386
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.43 E-value=5.9e-13 Score=140.26 Aligned_cols=121 Identities=35% Similarity=0.519 Sum_probs=96.2
Q ss_pred CCcCcceEEE-ecCCceeeeEEechhh-hhhhhhHHHHHHHHH--------------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKAR-IQDGMKVAVKVFDLQY-ERAFKSFDVACDMMK--------------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~-l~~g~~vavK~l~~~~-~~~~~~f~~e~~~~~--------------------------~Lv~ey~~~gs 458 (639)
.|+|.||+++ -..|..+|||.++... .+.......|++++| .+||||+.+||
T Consensus 24 Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGs 103 (732)
T KOG4250|consen 24 GAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGS 103 (732)
T ss_pred CccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCc
Confidence 5799999999 4579999999986532 222333444555533 26899999999
Q ss_pred chhcccc--CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeec--C--CcceeeccccccccccccC
Q 041082 459 LEKCLYS--SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLG--N--NMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 459 L~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~--~--~~~~~i~dfgla~~~~~~~ 530 (639)
|...|.+ ....|+....+.+..+++.||.||| ..+|+||||||.||++- + ...=|++|||.||-+.++.
T Consensus 104 L~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 104 LRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 9999986 3456999999999999999999999 67899999999999983 3 3446899999999887665
No 387
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=2.9e-13 Score=142.17 Aligned_cols=114 Identities=26% Similarity=0.368 Sum_probs=89.9
Q ss_pred CcCcceEEEec-CCceeeeEEechhhhh---hhhhHHHHHHHHH---------------------hhhhhcCCCCCchhc
Q 041082 408 GFGSIYKARIQ-DGMKVAVKVFDLQYER---AFKSFDVACDMMK---------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 408 g~g~vy~~~l~-~g~~vavK~l~~~~~~---~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~ 462 (639)
.||.|+.+... .+...|||++.....- ...+...|..++. ..||||..+|++..+
T Consensus 380 sFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~ 459 (694)
T KOG0694|consen 380 SFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHH 459 (694)
T ss_pred cCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEE
Confidence 48999999875 5689999998654322 2233334444422 268999999996666
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.+. ..++..+..-+|..|+.||+||| ..+||+||||..|||||.+|.+||+|||+++--
T Consensus 460 ~~~--~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 460 IHT--DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred Eec--ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 543 45888888889999999999999 789999999999999999999999999999853
No 388
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.43 E-value=1.9e-13 Score=129.48 Aligned_cols=119 Identities=34% Similarity=0.408 Sum_probs=93.1
Q ss_pred CcCcceEEEe-cCCceeeeEEechhhhhh---hhhHHHHHHHHH--------------------hhhhhcCCCCCchhcc
Q 041082 408 GFGSIYKARI-QDGMKVAVKVFDLQYERA---FKSFDVACDMMK--------------------KLVLEYMPHGSLEKCL 463 (639)
Q Consensus 408 g~g~vy~~~l-~~g~~vavK~l~~~~~~~---~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l 463 (639)
.||.|...+. .+|...|+|+++....-. ......|..+++ ++||||+++|.|..++
T Consensus 56 SFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~L 135 (355)
T KOG0616|consen 56 SFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYL 135 (355)
T ss_pred ccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHH
Confidence 4777877665 467899999997654322 222333333322 3789999999999999
Q ss_pred ccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 464 YSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 464 ~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
+... .++.....-+|.+|+.|++||| +..|++||+||+|||+|.++..||.|||+|+-+....
T Consensus 136 rk~~-rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 136 RKSG-RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred HhcC-CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 8643 4777777779999999999999 7789999999999999999999999999999776543
No 389
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.43 E-value=4.5e-13 Score=139.65 Aligned_cols=116 Identities=27% Similarity=0.354 Sum_probs=85.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHHHh--------------------------hhhhcCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMMKK--------------------------LVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~~~--------------------------Lv~ey~~~g 457 (639)
.++|.+|++.. .++..+|+|++..... .....+..|+..++. ++++++ ++
T Consensus 28 G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~ 106 (345)
T cd07877 28 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GA 106 (345)
T ss_pred cCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-cc
Confidence 46788999874 5688999998864321 112334445444321 223333 56
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+|.+++.. ..+++..+..++.++++|++||| ..+|+||||||+||+++.++.+|++|||+++....
T Consensus 107 ~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~ 172 (345)
T cd07877 107 DLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 172 (345)
T ss_pred CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence 67666543 34899999999999999999999 67899999999999999999999999999986543
No 390
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.43 E-value=2.7e-13 Score=140.82 Aligned_cols=207 Identities=24% Similarity=0.311 Sum_probs=127.2
Q ss_pred cCcceEEEe-cCCceeeeEEechhhhh--hhhhHHHHHHHHHh--------------------hhhhcCCCCCchhcccc
Q 041082 409 FGSIYKARI-QDGMKVAVKVFDLQYER--AFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 409 ~g~vy~~~l-~~g~~vavK~l~~~~~~--~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~ 465 (639)
|+.|..+.. ..+..||+|.++.+... ....+..|+++|+. +|+||..+|.+++++..
T Consensus 69 f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~ 148 (596)
T KOG0586|consen 69 FAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVK 148 (596)
T ss_pred eEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHh
Confidence 556666654 35789999998866532 33457778877653 68999999999999976
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCCccc--cccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQSFTQ--NTNTCHHR 543 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~~~~--~~~~~~~d 543 (639)
....-+ ...-.+..++.+|++|+| ...|+|||||+.||+||.++++||+|||++.++.......+. ....+...
T Consensus 149 ~gr~~e-~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPE 224 (596)
T KOG0586|consen 149 HGRMKE-KEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPE 224 (596)
T ss_pred cccchh-hhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChH
Confidence 544344 445567789999999999 677999999999999999999999999999887654322111 11111122
Q ss_pred cc-c-CCCCCCCccCCCccchHHHHHhhCCCC--cceeeecc-ccccccccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 041082 544 IY-G-TRRNPQMNFFSGEMTLKSWVNDLLPIS--VMEVVDVN-LLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINA 618 (639)
Q Consensus 544 vy-G-tg~~p~~~~~~~~~~l~~~~~~~~~~~--~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m 618 (639)
+| | .--.|--|.|+-|+.|...|...+|.+ ......++ +.+.+.-..... ...-++...-+..+|++|+++
T Consensus 225 l~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms----~dce~lLrk~lvl~Pskr~~~ 300 (596)
T KOG0586|consen 225 LFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMS----CDCEDLLRKFLVLNPSKRGPC 300 (596)
T ss_pred hhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceee----chhHHHHHHhhccCccccCCH
Confidence 22 2 000122223333443333344444432 11122222 222211000011 122345567778899999999
Q ss_pred HHHHH
Q 041082 619 KESVT 623 (639)
Q Consensus 619 ~~v~~ 623 (639)
.+|.+
T Consensus 301 dqim~ 305 (596)
T KOG0586|consen 301 DQIMK 305 (596)
T ss_pred HHhhh
Confidence 99985
No 391
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.39 E-value=2.8e-13 Score=156.46 Aligned_cols=73 Identities=16% Similarity=0.266 Sum_probs=61.1
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-----------------
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN----------------- 511 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~----------------- 511 (639)
.++||+ .++|.+++......+++.++..|+.+|++||+||| ..+|+||||||+|||++.
T Consensus 57 ~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 57 RALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred hhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 567887 55999999765556999999999999999999999 678999999999999954
Q ss_pred --Ccceeecccccccc
Q 041082 512 --NMVAHLSDFGMAKL 525 (639)
Q Consensus 512 --~~~~~i~dfgla~~ 525 (639)
++.+|++|||+++.
T Consensus 133 ~~~~~~ki~DfG~a~~ 148 (793)
T PLN00181 133 DEDATTKSREIGSSRR 148 (793)
T ss_pred cccCcccccccccccc
Confidence 45677777777764
No 392
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.38 E-value=2.6e-13 Score=150.32 Aligned_cols=168 Identities=18% Similarity=0.222 Sum_probs=102.9
Q ss_pred hhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
++.|||++.-.+.+.++.....-....-.+++.+|+.||+|+| ..+||||||||.||.||.+..+||+|||+|....
T Consensus 672 YIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 672 YIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred EEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 4679999998888887753321134455779999999999999 5669999999999999999999999999998732
Q ss_pred cc-------CCC-----------cccccccc---ccccc-cCCCCC---CCccCCCccchHHHHHhhCCCCcce------
Q 041082 528 KE-------DQS-----------FTQNTNTC---HHRIY-GTRRNP---QMNFFSGEMTLKSWVNDLLPISVME------ 576 (639)
Q Consensus 528 ~~-------~~~-----------~~~~~~~~---~~dvy-Gtg~~p---~~~~~~~~~~l~~~~~~~~~~~~~~------ 576 (639)
.. ... .+..++|. +..+. ++.+.+ +-|+|+-|+.+.+.... ++..+..
T Consensus 749 ~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP-F~TsMERa~iL~~ 827 (1351)
T KOG1035|consen 749 ENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP-FGTSMERASILTN 827 (1351)
T ss_pred hhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc-CCchHHHHHHHHh
Confidence 10 000 01111111 00011 122212 22456666666665443 3322211
Q ss_pred eeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 577 VVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 577 ~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
.=++.+..+. .-....+..-.+++.+-++.+|.+|||+.|++.
T Consensus 828 LR~g~iP~~~----~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 828 LRKGSIPEPA----DFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred cccCCCCCCc----ccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 1122222110 001223344456778889999999999999874
No 393
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.38 E-value=6.9e-13 Score=144.75 Aligned_cols=54 Identities=37% Similarity=0.522 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 472 IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 472 ~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
..+...|+.+++.||+||| ..+|+||||||.|||++.++.+||+|||+++.+..
T Consensus 266 ~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 319 (501)
T PHA03210 266 LKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEK 319 (501)
T ss_pred HHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCc
Confidence 3445689999999999999 67899999999999999999999999999987653
No 394
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.37 E-value=1.4e-12 Score=136.87 Aligned_cols=118 Identities=26% Similarity=0.367 Sum_probs=87.0
Q ss_pred CcCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHHHHh--------------------------hhhhcCCCCCch
Q 041082 408 GFGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------------LVLEYMPHGSLE 460 (639)
Q Consensus 408 g~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------------Lv~ey~~~gsL~ 460 (639)
.||.|.++.-. .++.||||++.... ....+-..|+.++.. +|+|-+.. +|+
T Consensus 198 tFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~-NLY 275 (586)
T KOG0667|consen 198 SFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLST-NLY 275 (586)
T ss_pred ccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhh-hHH
Confidence 47888888754 58999999986432 112233334433221 56665543 788
Q ss_pred hccccC-CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC--CcceeeccccccccccccC
Q 041082 461 KCLYSS-NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN--NMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 461 ~~l~~~-~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~--~~~~~i~dfgla~~~~~~~ 530 (639)
+++... ...++......|+.+|+.||.+|| ..+|||+||||+||||.+ ..++||.|||.|.+.....
T Consensus 276 ellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v 345 (586)
T KOG0667|consen 276 ELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV 345 (586)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc
Confidence 888763 345788888899999999999999 788999999999999975 4579999999998876544
No 395
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.35 E-value=1.3e-12 Score=114.78 Aligned_cols=116 Identities=30% Similarity=0.373 Sum_probs=90.0
Q ss_pred CcCcceEEEec-CCceeeeEEechhhh--hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARIQ-DGMKVAVKVFDLQYE--RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l~-~g~~vavK~l~~~~~--~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.+|+||+++-. .+..||+|++++... +...+..+|+...+ .||+||+.. +|.++..
T Consensus 14 tygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyfd 92 (292)
T KOG0662|consen 14 TYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFD 92 (292)
T ss_pred cceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHHH
Confidence 47889999854 578999999876542 22233344444432 167888865 6766666
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+-...++.........+..+||.|.| +..|+|||+||.|.|+..+++.|++|||+||-++
T Consensus 93 slng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafg 152 (292)
T KOG0662|consen 93 SLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFG 152 (292)
T ss_pred hcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcC
Confidence 54456888888889999999999999 7889999999999999999999999999999764
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.34 E-value=1.5e-12 Score=139.27 Aligned_cols=196 Identities=23% Similarity=0.335 Sum_probs=118.4
Q ss_pred ccccCCCCCCcC----cceEEEecCCceeeeEEechhhhhhhhhHHHHHHHH---------------------Hhhhhhc
Q 041082 399 IDLSMNNFSGFG----SIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMM---------------------KKLVLEY 453 (639)
Q Consensus 399 l~ls~N~l~g~g----~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~---------------------~~Lv~ey 453 (639)
+-++.+.+-|.| .||+|.+. |+.||||++-.... .-..+|++.. .++..|-
T Consensus 509 ~~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~~---~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 509 LFFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEFF---DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred eeeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHhH---HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehH
Confidence 334555555544 38898885 67999998754432 1222344331 1233343
Q ss_pred CCCCCchhccccCCcc---CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-----Ccceeecccccccc
Q 041082 454 MPHGSLEKCLYSSNYI---LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-----NMVAHLSDFGMAKL 525 (639)
Q Consensus 454 ~~~gsL~~~l~~~~~~---l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-----~~~~~i~dfgla~~ 525 (639)
+ ..+|.+++..+... ..-..-..+..+++.|+++|| +..||||||||.|||++. ..+|+|+|||+++-
T Consensus 585 C-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 585 C-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred h-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 3 23666666542111 110123456788999999999 678999999999999976 36799999999998
Q ss_pred ccccCCCccc---cc---------------cccccccc--c--------CCCCCCCccCCCccchHHHHHhhCCCCccee
Q 041082 526 LLKEDQSFTQ---NT---------------NTCHHRIY--G--------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEV 577 (639)
Q Consensus 526 ~~~~~~~~~~---~~---------------~~~~~dvy--G--------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 577 (639)
+..+..+.+. .. .+...|++ | .|+.|..+.+....++.. .. .+.
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~------~~--~~L 732 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT------GN--YTL 732 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc------Cc--cce
Confidence 8776554221 01 11145666 5 456777654433222210 11 111
Q ss_pred eeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 041082 578 VDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESV 622 (639)
Q Consensus 578 ~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~ 622 (639)
+. +. ..++| ...+|+-+.+..+|..||++.+|+
T Consensus 733 ~~--L~--------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 733 VH--LE--------PLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred ee--ec--------cCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 10 10 11233 567788899999999999999998
No 397
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.34 E-value=1.7e-12 Score=123.14 Aligned_cols=76 Identities=36% Similarity=0.468 Sum_probs=67.3
Q ss_pred hhhhcCCCCCchhcccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC---Ccceeeccccccc
Q 041082 449 LVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN---NMVAHLSDFGMAK 524 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~---~~~~~i~dfgla~ 524 (639)
+|||.|++|.|.+.+.. +...++..+...|..+|+.|+.||| ...|.||||||.|+|... +-..|++|||+|+
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 68999999999998876 3456888889999999999999999 788999999999999964 5678999999999
Q ss_pred ccc
Q 041082 525 LLL 527 (639)
Q Consensus 525 ~~~ 527 (639)
...
T Consensus 213 ~t~ 215 (400)
T KOG0604|consen 213 ETQ 215 (400)
T ss_pred ccC
Confidence 654
No 398
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.33 E-value=4.4e-13 Score=127.69 Aligned_cols=117 Identities=24% Similarity=0.328 Sum_probs=85.4
Q ss_pred CcCcceEEEecCC-----ceeeeEEechhh--hhhhhhHHHHHHHHH---------------------hhhhhcCCCCCc
Q 041082 408 GFGSIYKARIQDG-----MKVAVKVFDLQY--ERAFKSFDVACDMMK---------------------KLVLEYMPHGSL 459 (639)
Q Consensus 408 g~g~vy~~~l~~g-----~~vavK~l~~~~--~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL 459 (639)
.+|.||++.-.++ ...|+|.+.-+. .+...+..+|+..++ .+++||.+. +|
T Consensus 36 TYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL 114 (438)
T KOG0666|consen 36 TYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DL 114 (438)
T ss_pred ccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hH
Confidence 3788999965432 367888876542 122233334443322 257888886 77
Q ss_pred hhcccc----CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC----cceeeccccccccccc
Q 041082 460 EKCLYS----SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN----MVAHLSDFGMAKLLLK 528 (639)
Q Consensus 460 ~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~----~~~~i~dfgla~~~~~ 528 (639)
.+.++. ..+.+.-.....|..+|..|+.||| +.=|+||||||.||++..+ +.+||+|+|+||++..
T Consensus 115 ~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~ 188 (438)
T KOG0666|consen 115 WHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNN 188 (438)
T ss_pred HHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhc
Confidence 776653 2245777788899999999999999 5559999999999999888 8999999999998754
No 399
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.32 E-value=1.9e-12 Score=116.60 Aligned_cols=117 Identities=29% Similarity=0.390 Sum_probs=79.6
Q ss_pred cCcceEEE-ecCCceeeeEEechhhhhh-hhhHHHHHHHHH---------------------hhhhhcCCCCCchhcccc
Q 041082 409 FGSIYKAR-IQDGMKVAVKVFDLQYERA-FKSFDVACDMMK---------------------KLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 409 ~g~vy~~~-l~~g~~vavK~l~~~~~~~-~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l~~ 465 (639)
+|.+-+.+ .++|+..|+|++...-+.. .+....++++.. .+-||-|.- ||..+-.+
T Consensus 59 yG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~ 137 (282)
T KOG0984|consen 59 YGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRK 137 (282)
T ss_pred cchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHH
Confidence 56665555 4678999999987654421 222223333311 023455532 44332211
Q ss_pred ---CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 466 ---SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 466 ---~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
.+...+..-.=+||..|..||.|||+ ...|+|||+||+|||++.++.+|+||||++-.+.+
T Consensus 138 v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 138 VLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred HHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 33445666677899999999999997 55799999999999999999999999999887654
No 400
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.32 E-value=2e-12 Score=121.75 Aligned_cols=116 Identities=16% Similarity=0.179 Sum_probs=85.5
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh---------hhhH-----------------HHHHHHHH-------------
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA---------FKSF-----------------DVACDMMK------------- 447 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~---------~~~f-----------------~~e~~~~~------------- 447 (639)
.++|.||++..++|..+|+|++....... ...| ..|.+.+.
T Consensus 8 G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p~~~ 87 (190)
T cd05147 8 GKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCPEPI 87 (190)
T ss_pred ccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCcEE
Confidence 45789999998889999999986542110 0011 11333211
Q ss_pred -----hhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccc
Q 041082 448 -----KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGM 522 (639)
Q Consensus 448 -----~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgl 522 (639)
.+||||++++++..... ....+++....+++.+++.+|.|+|| ..+|+||||||.||+++ ++.+++.|||+
T Consensus 88 ~~~~~~iVmE~i~g~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli~-~~~v~LiDFG~ 163 (190)
T cd05147 88 LLKSHVLVMEFIGDDGWAAPRL-KDAPLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLYH-DGKLYIIDVSQ 163 (190)
T ss_pred EecCCEEEEEEeCCCCCcchhh-hcCCCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEEE-CCcEEEEEccc
Confidence 37899999877654422 12457888899999999999999954 45799999999999998 47899999999
Q ss_pred cccc
Q 041082 523 AKLL 526 (639)
Q Consensus 523 a~~~ 526 (639)
|...
T Consensus 164 a~~~ 167 (190)
T cd05147 164 SVEH 167 (190)
T ss_pred cccC
Confidence 8754
No 401
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.32 E-value=1.7e-12 Score=135.68 Aligned_cols=149 Identities=22% Similarity=0.251 Sum_probs=101.1
Q ss_pred hhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceee-cCCcceeeccccccccc
Q 041082 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL-GNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill-~~~~~~~i~dfgla~~~ 526 (639)
++|+|++.+|-+.+.+... +... ..+..|+.+++.|+.||| ..+|+|||+||.|||+ +..+..+++|||.++.+
T Consensus 392 ~~v~e~l~g~ell~ri~~~-~~~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSK-PEFC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eeeehhccccHHHHHHHhc-chhH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 4788999888665555432 2222 567789999999999999 6789999999999999 58889999999999988
Q ss_pred cccCCC--------cc----ccccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeecccccc
Q 041082 527 LKEDQS--------FT----QNTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSM 585 (639)
Q Consensus 527 ~~~~~~--------~~----~~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~ 585 (639)
..+-.+ .+ ....+..+|+| | ||+.|......+ ..+.. +...+ ...
T Consensus 467 ~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~--~i~~~-~~s---------- 532 (612)
T KOG0603|consen 467 ERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHT--RIQMP-KFS---------- 532 (612)
T ss_pred chhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHH--hhcCC-ccc----------
Confidence 765111 00 11234478888 6 888887643322 11111 00000 001
Q ss_pred ccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 586 EDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 586 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
........+|..+|++.+|.+||+|.++..
T Consensus 533 --------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 --------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 111234566788999999999999999864
No 402
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.32 E-value=4e-12 Score=126.30 Aligned_cols=123 Identities=30% Similarity=0.441 Sum_probs=90.7
Q ss_pred CCcCcceEEE-ecCCceeeeEEechhhhhh-------hhhHHHHHHHHHh---------------------hhhhcCCCC
Q 041082 407 SGFGSIYKAR-IQDGMKVAVKVFDLQYERA-------FKSFDVACDMMKK---------------------LVLEYMPHG 457 (639)
Q Consensus 407 ~g~g~vy~~~-l~~g~~vavK~l~~~~~~~-------~~~f~~e~~~~~~---------------------Lv~ey~~~g 457 (639)
.||..||++. +.....||||.-.+..... .+...+|.++.+. -|.||+++.
T Consensus 474 GGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGN 553 (775)
T KOG1151|consen 474 GGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGN 553 (775)
T ss_pred ccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCC
Confidence 4688899986 5567889999764432211 1112233333221 378999999
Q ss_pred CchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeec---CCcceeeccccccccccccCC
Q 041082 458 SLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLG---NNMVAHLSDFGMAKLLLKEDQ 531 (639)
Q Consensus 458 sL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~---~~~~~~i~dfgla~~~~~~~~ 531 (639)
+|.-+|... +.++......|+.+|..||.||- +..|||+|-||||-||||- ..++.||.|||+++++.++.+
T Consensus 554 DLDFYLKQh-klmSEKEARSIiMQiVnAL~YLN-EikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy 628 (775)
T KOG1151|consen 554 DLDFYLKQH-KLMSEKEARSIIMQIVNALKYLN-EIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSY 628 (775)
T ss_pred chhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHh-ccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCcc
Confidence 998888643 34666667789999999999998 4589999999999999994 468999999999999876553
No 403
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.32 E-value=1.5e-12 Score=130.11 Aligned_cols=134 Identities=26% Similarity=0.316 Sum_probs=99.2
Q ss_pred cccccccccCCCC--------CCcCcceEEEec-CCceeeeEEechhhhhhh---hhHHHHHHHHH--------------
Q 041082 394 KVLVGIDLSMNNF--------SGFGSIYKARIQ-DGMKVAVKVFDLQYERAF---KSFDVACDMMK-------------- 447 (639)
Q Consensus 394 ~~L~~l~ls~N~l--------~g~g~vy~~~l~-~g~~vavK~l~~~~~~~~---~~f~~e~~~~~-------------- 447 (639)
+.|+..-++.|-| .|||.||-+... .|..+|.|.++-....-. .--..|..++.
T Consensus 175 K~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf 254 (591)
T KOG0986|consen 175 KWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF 254 (591)
T ss_pred HHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence 3344444555555 468999977765 588999998865432211 11112222221
Q ss_pred ------hhhhhcCCCCCchhcccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccc
Q 041082 448 ------KLVLEYMPHGSLEKCLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDF 520 (639)
Q Consensus 448 ------~Lv~ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~df 520 (639)
.||+.-|-+|+|.-++.. ....++..+..-+|..|+.||++|| ...||.||+||.|||||+.++++|||.
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeecc
Confidence 167788999999988876 3356888888889999999999999 778999999999999999999999999
Q ss_pred cccccccccC
Q 041082 521 GMAKLLLKED 530 (639)
Q Consensus 521 gla~~~~~~~ 530 (639)
|+|.-+.++.
T Consensus 332 GLAvei~~g~ 341 (591)
T KOG0986|consen 332 GLAVEIPEGK 341 (591)
T ss_pred ceEEecCCCC
Confidence 9998776554
No 404
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.31 E-value=3.1e-12 Score=130.86 Aligned_cols=117 Identities=26% Similarity=0.367 Sum_probs=87.9
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhhhh---hhhHHHHHHHH--------------------HhhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYERA---FKSFDVACDMM--------------------KKLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~~~---~~~f~~e~~~~--------------------~~Lv~ey~~~gsL~~~ 462 (639)
.+||.||.+.-. .|..+|+|++.-+..-. ......|-.++ -+|||||+++|++..+
T Consensus 152 GAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTL 231 (550)
T KOG0605|consen 152 GAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTL 231 (550)
T ss_pred ccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHH
Confidence 569999999865 58999999997664322 22233333332 1489999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
|-..+ .|+.....-++...+-|++-+| ..+++||||||.|+|+|..|++|++||||+.-+.
T Consensus 232 L~~~~-~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 232 LMRKD-TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred HHhcC-cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 86533 3433333445666778999999 8899999999999999999999999999986543
No 405
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.31 E-value=5.2e-13 Score=124.60 Aligned_cols=200 Identities=22% Similarity=0.242 Sum_probs=116.3
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh-hhhhhHHHHHHHHHh---------------------hhhhcCCCCCchh--
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE-RAFKSFDVACDMMKK---------------------LVLEYMPHGSLEK-- 461 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~~---------------------Lv~ey~~~gsL~~-- 461 (639)
..||+|+|... +.|+..|||+++.... ...+.+..+.+.... +-||.|.- |+..
T Consensus 75 G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~-SlDklY 153 (361)
T KOG1006|consen 75 GAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI-SLDKLY 153 (361)
T ss_pred CcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh-hHHHHH
Confidence 45889998875 5689999999976543 223334333333110 22444432 3322
Q ss_pred -cccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccCCC----c--
Q 041082 462 -CLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKEDQS----F-- 533 (639)
Q Consensus 462 -~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~~~----~-- 533 (639)
.++. ....+...-.-+|+..+.+||.||-. ...|+|||+||+|||+|..+.+|+||||+...+..+-.. .
T Consensus 154 k~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCr 231 (361)
T KOG1006|consen 154 KRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCR 231 (361)
T ss_pred HHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCc
Confidence 2222 12234555556677777899999986 467999999999999999999999999998766432110 0
Q ss_pred ----cc------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchH
Q 041082 534 ----TQ------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKK 594 (639)
Q Consensus 534 ----~~------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 594 (639)
+. .....++||| | ||+-|+.. | .++.+-+.+.+.. ||.+.... ...-
T Consensus 232 pYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~-w---~svfeql~~Vv~g------dpp~l~~~----~~~~ 297 (361)
T KOG1006|consen 232 PYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK-W---DSVFEQLCQVVIG------DPPILLFD----KECV 297 (361)
T ss_pred cccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch-H---HHHHHHHHHHHcC------CCCeecCc----cccc
Confidence 00 0112367777 6 77777642 1 1111112221111 22221110 0001
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 041082 595 QCLSFVFNLAMECTAESPKQRINAKESVT 623 (639)
Q Consensus 595 ~~~~~~~~l~~~C~~~~p~~RP~m~~v~~ 623 (639)
+.-..+.+..-.|+-.+-+.||...+..+
T Consensus 298 ~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 298 HYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 12345666677999999999999887654
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.30 E-value=2.4e-11 Score=113.89 Aligned_cols=201 Identities=17% Similarity=0.172 Sum_probs=128.1
Q ss_pred cCcceEEEec-CCceeeeEEechhhhhhhhhHHHHHHH--------------------H--HhhhhhcCCCCCchhcccc
Q 041082 409 FGSIYKARIQ-DGMKVAVKVFDLQYERAFKSFDVACDM--------------------M--KKLVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 409 ~g~vy~~~l~-~g~~vavK~l~~~~~~~~~~f~~e~~~--------------------~--~~Lv~ey~~~gsL~~~l~~ 465 (639)
||.+..+..+ ....+++|.+..... ..++|..|... + -.+++||+|.|+|.+-+..
T Consensus 37 FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~ 115 (378)
T KOG1345|consen 37 FGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA 115 (378)
T ss_pred eeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc
Confidence 6666666654 346677776643322 23445544332 0 1257899999999988754
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeec--CCcceeeccccccccccccCC--------Cccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLG--NNMVAHLSDFGMAKLLLKEDQ--------SFTQ 535 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~--~~~~~~i~dfgla~~~~~~~~--------~~~~ 535 (639)
..+......+++.+++.|+.||| +..+||||||..|||+- ++.++|+||||+.+..+.... +.+.
T Consensus 116 --~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe 190 (378)
T KOG1345|consen 116 --AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPE 190 (378)
T ss_pred --ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcH
Confidence 33666777889999999999999 78899999999999993 456899999999886543210 0000
Q ss_pred ---------cccccccccc--c-------CCCCCCCccCCCccchHHHHHhhCCCCcceeeeccccccccccccchHHHH
Q 041082 536 ---------NTNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLLPISVMEVVDVNLLSMEDKYFTTKKQCL 597 (639)
Q Consensus 536 ---------~~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 597 (639)
...-...|+| | ||+.|-..........++|....-.... --|+.... --
T Consensus 191 ~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~---~~P~~F~~----------fs 257 (378)
T KOG1345|consen 191 LCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP---ALPKKFNP----------FS 257 (378)
T ss_pred HHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc---cCchhhcc----------cC
Confidence 0111257888 7 9999977555556667777654322211 01111110 11
Q ss_pred HHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 041082 598 SFVFNLAMECTAESPKQRINAKESVTRLLKI 628 (639)
Q Consensus 598 ~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~ 628 (639)
.+++++..+-..++|++|-...++..+....
T Consensus 258 ~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 258 EKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred HHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 2345555678889999998777777665443
No 407
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=6.1e-12 Score=127.29 Aligned_cols=191 Identities=23% Similarity=0.254 Sum_probs=117.6
Q ss_pred CCceeeeEEechhhhh--hhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccccCCccCCHHHHH
Q 041082 419 DGMKVAVKVFDLQYER--AFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYSSNYILDIFQRL 476 (639)
Q Consensus 419 ~g~~vavK~l~~~~~~--~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~~~~~l~~~~~~ 476 (639)
.|..||||+++..... ....+..|+..|+. ||.|.-.+|+|++++-.....+...-..
T Consensus 42 TGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~ 121 (864)
T KOG4717|consen 42 TGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAK 121 (864)
T ss_pred ccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHH
Confidence 5789999999754322 22344556666553 5667777899999986655667777788
Q ss_pred HHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-CcceeeccccccccccccCCCcccc---cccc----ccccccCC
Q 041082 477 NIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLKEDQSFTQN---TNTC----HHRIYGTR 548 (639)
Q Consensus 477 ~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~~~~~~~~~---~~~~----~~dvyGtg 548 (639)
+++.||..|+.|.| +..||||||||.||+.-+ -+-+|+.|||++.-+.++..-.+.. +.++ -+|-|
T Consensus 122 kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsY--- 195 (864)
T KOG4717|consen 122 KYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSY--- 195 (864)
T ss_pred HHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCcc---
Confidence 99999999999999 788999999999998864 6789999999997665543211110 0010 11222
Q ss_pred CCCCCccCCCccchHHHHHhhCCCC-------cceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 041082 549 RNPQMNFFSGEMTLKSWVNDLLPIS-------VMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKES 621 (639)
Q Consensus 549 ~~p~~~~~~~~~~l~~~~~~~~~~~-------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v 621 (639)
-.|.-++|+-|+.|.-.|-...|.. +.-++|-.. +.+.-...+.-+|+.+.+..+|++|-+..||
T Consensus 196 DAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY--------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI 267 (864)
T KOG4717|consen 196 DAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY--------TVPSHVSKECRDLIQSMLVRDPKKRASLEEI 267 (864)
T ss_pred CCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc--------cCchhhhHHHHHHHHHHHhcCchhhccHHHH
Confidence 0122223333333322221111110 112222211 1122223344567788899999999999998
Q ss_pred HH
Q 041082 622 VT 623 (639)
Q Consensus 622 ~~ 623 (639)
+.
T Consensus 268 ~s 269 (864)
T KOG4717|consen 268 VS 269 (864)
T ss_pred hc
Confidence 74
No 408
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=3.7e-12 Score=117.95 Aligned_cols=77 Identities=27% Similarity=0.477 Sum_probs=67.5
Q ss_pred hhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
++|+++++. +|+..|......++.....++..+...||.|+| ...|+|||+|+.|||+++++..|++|||+||.+.
T Consensus 100 ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 100 YLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred eeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 378888876 788877655566888899999999999999999 8889999999999999999999999999997664
Q ss_pred c
Q 041082 528 K 528 (639)
Q Consensus 528 ~ 528 (639)
.
T Consensus 176 ~ 176 (376)
T KOG0669|consen 176 T 176 (376)
T ss_pred c
Confidence 3
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.29 E-value=6.2e-12 Score=129.16 Aligned_cols=111 Identities=23% Similarity=0.187 Sum_probs=84.0
Q ss_pred CCcCcceEEEec--CCceeeeEEechh-----hhhhhhhHHHHHHHHH-----------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ--DGMKVAVKVFDLQ-----YERAFKSFDVACDMMK-----------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~--~g~~vavK~l~~~-----~~~~~~~f~~e~~~~~-----------------~Lv~ey~~~gsL~~~ 462 (639)
.+||.||++... ++..+|||++... .......|..|++.++ .+||||+++++|...
T Consensus 29 G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE~~~G~~L~~~ 108 (365)
T PRK09188 29 DVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVRGWTEGVPLHLA 108 (365)
T ss_pred cCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEEccCCCCHHHh
Confidence 568999999864 5677899986532 1122345777777744 367899999988632
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecC-CCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL-KLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dl-k~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
... . ...++.++++||+|+| ..+|+|||| ||+||+++.++.+||+|||+|+.+..
T Consensus 109 -~~~----~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 109 -RPH----G---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred -Ccc----c---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 111 1 1457788999999999 678999999 99999999999999999999997654
No 410
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.28 E-value=7.8e-12 Score=140.96 Aligned_cols=118 Identities=33% Similarity=0.470 Sum_probs=94.4
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
.++|.||++... .+..+|+|++..... .....+..++..++ ++||||+++|+|.++
T Consensus 15 G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~l 94 (669)
T cd05610 15 GAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSL 94 (669)
T ss_pred CCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHH
Confidence 468899999875 678999999864321 12234555554432 378999999999998
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+... ..+++....+|+.+|+.||+||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 95 i~~~-~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 95 LHIY-GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN 156 (669)
T ss_pred HHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence 8643 34788888999999999999999 56899999999999999999999999999987643
No 411
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.25 E-value=1.7e-11 Score=115.98 Aligned_cols=117 Identities=21% Similarity=0.219 Sum_probs=86.0
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh--------------------------hhhHHHHHHHHH-------------
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA--------------------------FKSFDVACDMMK------------- 447 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~--------------------------~~~f~~e~~~~~------------- 447 (639)
.++|.||++...+|..+|||+++...... ...+..|...+.
T Consensus 8 G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 87 (190)
T cd05145 8 GKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVPEPI 87 (190)
T ss_pred CCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCceEE
Confidence 45789999998789999999987542110 001122232221
Q ss_pred -----hhhhhcCCCCCchhc-cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccc
Q 041082 448 -----KLVLEYMPHGSLEKC-LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFG 521 (639)
Q Consensus 448 -----~Lv~ey~~~gsL~~~-l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfg 521 (639)
.+||||++++++... +. ...++.....+++.+++.++.|+|+ ..+|+||||||.||+++ ++.+++.|||
T Consensus 88 ~~~~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~~~~~liDFG 162 (190)
T cd05145 88 LLKKNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-DGKPYIIDVS 162 (190)
T ss_pred EecCCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-CCCEEEEEcc
Confidence 378999998755432 32 2346777888999999999999994 16899999999999999 8999999999
Q ss_pred ccccccc
Q 041082 522 MAKLLLK 528 (639)
Q Consensus 522 la~~~~~ 528 (639)
+|+....
T Consensus 163 ~a~~~~~ 169 (190)
T cd05145 163 QAVELDH 169 (190)
T ss_pred cceecCC
Confidence 9986643
No 412
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.23 E-value=6.9e-12 Score=127.21 Aligned_cols=118 Identities=30% Similarity=0.457 Sum_probs=87.5
Q ss_pred cCcceEEEe-cCCceeeeEEechhh--hhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhc-cc
Q 041082 409 FGSIYKARI-QDGMKVAVKVFDLQY--ERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKC-LY 464 (639)
Q Consensus 409 ~g~vy~~~l-~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~-l~ 464 (639)
||.||-|.. ..|+.||||+++... .....+...|+.++.. +|||-+.+ +.-+. |.
T Consensus 577 FG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-DMLEMILS 655 (888)
T KOG4236|consen 577 FGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-DMLEMILS 655 (888)
T ss_pred ceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-hHHHHHHH
Confidence 899998875 478999999987543 2233566777777432 46777744 44444 33
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC---CcceeeccccccccccccC
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN---NMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~---~~~~~i~dfgla~~~~~~~ 530 (639)
.+...|....-.-++.||..||.||| -.+|+|+||||.||||.. ...+|+||||+||++++..
T Consensus 656 sEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 656 SEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred hhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 34445666555667789999999999 567999999999999964 4679999999999998654
No 413
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.22 E-value=6.8e-13 Score=136.05 Aligned_cols=133 Identities=31% Similarity=0.423 Sum_probs=83.9
Q ss_pred CCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEE
Q 041082 74 NLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDL 153 (639)
Q Consensus 74 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (639)
.++--...||+.|++. .+|..+..+..|..+.|++|.+- .+|..+.++..|++|+|+.|+++ ..|..+..|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l------ 143 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL------ 143 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcC------
Confidence 3444556677777776 56666666666666666666653 45666666666666666666665 444444443
Q ss_pred ecCCCCCCCCCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCCCCCCC
Q 041082 154 DLSHNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSST 230 (639)
Q Consensus 154 ~Ls~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 230 (639)
-|+.|.+++|+++ .+|..++.+..|..||.+.|.+... |..++.+.+|+.|.+..|++...+
T Consensus 144 -------------pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~sl-psql~~l~slr~l~vrRn~l~~lp 205 (722)
T KOG0532|consen 144 -------------PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSL-PSQLGYLTSLRDLNVRRNHLEDLP 205 (722)
T ss_pred -------------cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhhhc-hHHhhhHHHHHHHHHhhhhhhhCC
Confidence 2445555555554 5566666667777777777777544 445677777777777777766543
No 414
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.22 E-value=2e-11 Score=121.11 Aligned_cols=116 Identities=28% Similarity=0.361 Sum_probs=91.2
Q ss_pred CcCcceEEEecC-CceeeeEEechhhhhhhhhH---HHHHHHH--------------------HhhhhhcCCCCCchhcc
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYERAFKSF---DVACDMM--------------------KKLVLEYMPHGSLEKCL 463 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~~~~~~f---~~e~~~~--------------------~~Lv~ey~~~gsL~~~l 463 (639)
..|+||.+.+.+ +...|+|+++.......+.. ..|.+++ ..|+|||+++|+|..+.
T Consensus 89 diG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~Lr 168 (459)
T KOG0610|consen 89 DIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLR 168 (459)
T ss_pred CceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHH
Confidence 478999999876 48899999986654332222 2233332 23799999999999888
Q ss_pred cc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 464 YS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 464 ~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+. ....++.....-+|..|.-||+||| ..+||.|||||.|||+.+++.+-++||-|+...
T Consensus 169 qkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 169 QKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred hhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 76 3456777666668888999999999 889999999999999999999999999887654
No 415
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.21 E-value=2.1e-12 Score=120.75 Aligned_cols=202 Identities=21% Similarity=0.323 Sum_probs=130.7
Q ss_pred cCcceEEEecCCceeeeEEechhh--hhhhhhHHHHHHHHHh--------------------hhhhcCCCCCchhccccC
Q 041082 409 FGSIYKARIQDGMKVAVKVFDLQY--ERAFKSFDVACDMMKK--------------------LVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 409 ~g~vy~~~l~~g~~vavK~l~~~~--~~~~~~f~~e~~~~~~--------------------Lv~ey~~~gsL~~~l~~~ 466 (639)
.|..|+|+++++ .+.+|++.... .+..++|..|+..++. ++..||+-|||+..||+.
T Consensus 203 sgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~ 281 (448)
T KOG0195|consen 203 SGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQ 281 (448)
T ss_pred CcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcC
Confidence 578999999865 34456554432 3445677777655321 567899999999999983
Q ss_pred -CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeec--cccccccccccCCCccccccccccc
Q 041082 467 -NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLS--DFGMAKLLLKEDQSFTQNTNTCHHR 543 (639)
Q Consensus 467 -~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~--dfgla~~~~~~~~~~~~~~~~~~~d 543 (639)
...++-.+.+++|.++|+|++|||+- .|-|..--+.+..|.+|++.++||+ |--++.+. ++.
T Consensus 282 t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe--------------~gr 346 (448)
T KOG0195|consen 282 TSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE--------------VGR 346 (448)
T ss_pred ccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec--------------ccc
Confidence 45678889999999999999999953 6677788899999999999999986 22222111 122
Q ss_pred cc-----c---CCCCCCC------ccCCCccchHHHHHhhCCCC---ccee-eeccccccccccccchHHHHHHHHHHHh
Q 041082 544 IY-----G---TRRNPQM------NFFSGEMTLKSWVNDLLPIS---VMEV-VDVNLLSMEDKYFTTKKQCLSFVFNLAM 605 (639)
Q Consensus 544 vy-----G---tg~~p~~------~~~~~~~~l~~~~~~~~~~~---~~~~-~d~~l~~~~~~~~~~~~~~~~~~~~l~~ 605 (639)
+| . -.++|-+ ++++...-||+.++..+|.. -+|+ .--.+. +-+...++.....+.+++-
T Consensus 347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale---glrv~ippgis~hm~klm~ 423 (448)
T KOG0195|consen 347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE---GLRVHIPPGISRHMNKLMN 423 (448)
T ss_pred ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc---cccccCCCCccHHHHHHHH
Confidence 22 0 1222222 23344455555554444432 1111 000000 0112233444556778888
Q ss_pred hccCCCCCCCCCHHHHHHHHHHhH
Q 041082 606 ECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 606 ~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
-|..++|.+||.+..|+-.||++.
T Consensus 424 icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 424 ICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHhcCCCCcCCCcceehhhHHHhc
Confidence 999999999999999999998764
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.19 E-value=4.9e-11 Score=124.88 Aligned_cols=167 Identities=27% Similarity=0.310 Sum_probs=113.8
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
.|.+|++.|+|.+.+......+||.-......+++.||+|+|+ ++--.|+.++++|.++|..+.+|++|||+..+..+
T Consensus 24 ~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~ 101 (484)
T KOG1023|consen 24 VIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEE 101 (484)
T ss_pred EEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc--CcceeeeeeccccceeeeeEEEEechhhhcccccc
Confidence 5678999999999998766779999999999999999999994 33339999999999999999999999999987742
Q ss_pred cC----CC---------c-----------cccccccccccc--c-------CCCCCCCccCCCc--cchHHHHHhhCCCC
Q 041082 529 ED----QS---------F-----------TQNTNTCHHRIY--G-------TRRNPQMNFFSGE--MTLKSWVNDLLPIS 573 (639)
Q Consensus 529 ~~----~~---------~-----------~~~~~~~~~dvy--G-------tg~~p~~~~~~~~--~~l~~~~~~~~~~~ 573 (639)
.. .. . .....+.++|+| | +.+.|.+...... ..+..+++. .
T Consensus 102 ~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~----~ 177 (484)
T KOG1023|consen 102 TAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK----G 177 (484)
T ss_pred cccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh----c
Confidence 10 00 0 001134467777 4 4555554322211 123333332 1
Q ss_pred cceeeeccccccccccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 041082 574 VMEVVDVNLLSMEDKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTRLLKIR 629 (639)
Q Consensus 574 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~~~~ 629 (639)
....+=|.+.. ..+....++.++..||.++|++||++.+|-..++.+.
T Consensus 178 ~~~~~rP~i~~--------~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 178 GSNPFRPSIEL--------LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred CCCCcCcchhh--------hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 11112122111 0123336888999999999999999999988777654
No 417
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=2.9e-11 Score=133.40 Aligned_cols=116 Identities=30% Similarity=0.389 Sum_probs=85.2
Q ss_pred CCcCcceEEEec-CCceeeeEEechhhh---hhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhc
Q 041082 407 SGFGSIYKARIQ-DGMKVAVKVFDLQYE---RAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 407 ~g~g~vy~~~l~-~g~~vavK~l~~~~~---~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~ 462 (639)
++||.|...++. .+..+|.|+++-... .....|..|-++|. ++|||||+||+|-.+
T Consensus 86 GaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltL 165 (1317)
T KOG0612|consen 86 GAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTL 165 (1317)
T ss_pred cccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHH
Confidence 458888887764 468889998865321 11234555544422 489999999999998
Q ss_pred cccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 463 LYSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 463 l~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+.... .+=+|+ |+ ++..|.-||.-+| ..+.|||||||.|||+|.+|++|++|||-..-+.
T Consensus 166 lSk~~~~pE~~A-rF-Y~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 166 LSKFDRLPEDWA-RF-YTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred HhhcCCChHHHH-HH-HHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence 87644 223555 33 4556778999999 8899999999999999999999999999554444
No 418
>PLN03150 hypothetical protein; Provisional
Probab=99.16 E-value=7.4e-11 Score=131.31 Aligned_cols=108 Identities=31% Similarity=0.423 Sum_probs=82.9
Q ss_pred CCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEEecC
Q 041082 77 SLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDLS 156 (639)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 156 (639)
.++.|+|++|.+.|.+|..+..+++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47788999999999999999999999999999999998899889999999999999999988888888877666665555
Q ss_pred CCCCCCCCCCCccEEEccCCccCccCCccccCC-CCCcEEEcccCCC
Q 041082 157 HNNLTDVQIPNLENLLLWGNNFSGAIPHFIFNA-SKLSILELQKNSF 202 (639)
Q Consensus 157 ~N~l~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l 202 (639)
+|. ++|.+|..+... .++..+++.+|..
T Consensus 499 ~N~------------------l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 499 GNS------------------LSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCc------------------ccccCChHHhhccccCceEEecCCcc
Confidence 544 445566655432 3445566666543
No 419
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.15 E-value=1.2e-12 Score=134.37 Aligned_cols=170 Identities=27% Similarity=0.406 Sum_probs=147.8
Q ss_pred EEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEeccc
Q 041082 54 VTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQN 133 (639)
Q Consensus 54 v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 133 (639)
.+..||+.|.+. .+|..+..+..|+.|.|..|.+. .+|..+.++..|+.|+|+.|+++ .+|..+..|+ |+.|-+++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sN 152 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSN 152 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEec
Confidence 456788888886 68988999999999999999998 79999999999999999999986 5788888888 99999999
Q ss_pred ccCccccCccccCCCCCCEEecCCCCCCCCC-----CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCcc
Q 041082 134 NFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ-----IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPN 208 (639)
Q Consensus 134 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 208 (639)
|+++ .+|..++.+..|..||.+.|.+..++ +.+|+.|.+..|++.. +|..+..+ .|..||++.|++.. +|-
T Consensus 153 Nkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~-lp~El~~L-pLi~lDfScNkis~-iPv 228 (722)
T KOG0532|consen 153 NKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLED-LPEELCSL-PLIRLDFSCNKISY-LPV 228 (722)
T ss_pred Cccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhh-CCHHHhCC-ceeeeecccCceee-cch
Confidence 9997 77888999999999999999998753 6788899999999984 55555544 68999999999974 588
Q ss_pred ccCCCCCCCEEEccCCCCCCCCC
Q 041082 209 TFGNLINLKRLNLYDNYLTSSTP 231 (639)
Q Consensus 209 ~~~~l~~L~~L~Ls~N~l~~~~~ 231 (639)
.|.+|+.|++|-|.+|.+.+.+.
T Consensus 229 ~fr~m~~Lq~l~LenNPLqSPPA 251 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQSPPA 251 (722)
T ss_pred hhhhhhhheeeeeccCCCCCChH
Confidence 89999999999999999987543
No 420
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=4.9e-11 Score=111.74 Aligned_cols=119 Identities=25% Similarity=0.397 Sum_probs=84.4
Q ss_pred CCcCcceEEEe-cCCceeeeEEechhhh--hhhhhHHHHHHHH-------------------------HhhhhhcCCCCC
Q 041082 407 SGFGSIYKARI-QDGMKVAVKVFDLQYE--RAFKSFDVACDMM-------------------------KKLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l-~~g~~vavK~l~~~~~--~~~~~f~~e~~~~-------------------------~~Lv~ey~~~gs 458 (639)
..||.||..+- ++|..+++|++..-.. -..+.+-.+..++ -+++.|.|.. +
T Consensus 64 GAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQS-D 142 (449)
T KOG0664|consen 64 GAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQS-D 142 (449)
T ss_pred cceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHHh-h
Confidence 34788886664 5789999998753221 1223333444441 2345566654 6
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
|.+.+-+ ...++-....-+..+|.|||.||| +.+|+||||||-|.|++.+...||+|||+||....++
T Consensus 143 LHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 143 LHKIIVS-PQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred hhheecc-CCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 6655543 334665555667789999999999 7789999999999999999999999999999876544
No 421
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.13 E-value=9e-11 Score=124.70 Aligned_cols=193 Identities=35% Similarity=0.510 Sum_probs=125.7
Q ss_pred EEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCC-CCcEEecccccCccccCccccCCCCCCEEecCCC
Q 041082 80 TLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLA-ELETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHN 158 (639)
Q Consensus 80 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 158 (639)
.|+++.|.+.. .+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 57777777642 3345556677888888888876 4555566664 7888888888886 44566778888888888888
Q ss_pred CCCCC-----CCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCCCCCCCCcc
Q 041082 159 NLTDV-----QIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPEL 233 (639)
Q Consensus 159 ~l~~~-----~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 233 (639)
.++.+ .+++|+.|++++|+++ .+|........|+++.+++|.... .+..+.++.++..+.+.+|++...
T Consensus 174 ~l~~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~-~~~~~~~~~~l~~l~l~~n~~~~~---- 247 (394)
T COG4886 174 DLSDLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIE-LLSSLSNLKNLSGLELSNNKLEDL---- 247 (394)
T ss_pred hhhhhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCccee-cchhhhhcccccccccCCceeeec----
Confidence 87763 4677888888888887 455554556668888888885432 344577777888887777766531
Q ss_pred hhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCccccccccCCcCCcEEEccCCcCCCC
Q 041082 234 SFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGP 313 (639)
Q Consensus 234 ~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 313 (639)
+..++.+++++.|++++|.++.. +. +..+.+++.|++++|.+...
T Consensus 248 ---------------------------------~~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 248 ---------------------------------PESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred ---------------------------------cchhccccccceecccccccccc-cc-ccccCccCEEeccCcccccc
Confidence 12233444555566666655532 22 55555666666666665544
Q ss_pred Cch
Q 041082 314 IPY 316 (639)
Q Consensus 314 ~p~ 316 (639)
+|.
T Consensus 293 ~~~ 295 (394)
T COG4886 293 LPL 295 (394)
T ss_pred chh
Confidence 443
No 422
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.12 E-value=5.7e-11 Score=113.81 Aligned_cols=113 Identities=27% Similarity=0.337 Sum_probs=88.3
Q ss_pred cCcceEE-EecCCceeeeEEechhhhhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhccccC
Q 041082 409 FGSIYKA-RIQDGMKVAVKVFDLQYERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 409 ~g~vy~~-~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
+++|.-+ .+..|..+|||+++..........-+|++++. +||+|-|.+|+|-.+++.
T Consensus 91 yasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~- 169 (463)
T KOG0607|consen 91 YASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQK- 169 (463)
T ss_pred ceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHH-
Confidence 4444433 36778999999998775555555556666632 489999999999988875
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC---cceeecccccccc
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN---MVAHLSDFGMAKL 525 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~---~~~~i~dfgla~~ 525 (639)
.+.++.....+++.+||.||.||| ..+|.|||+||.|||-.+- -.+||+||-++.-
T Consensus 170 ~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 170 RKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 345778788899999999999999 7889999999999999653 3479999977654
No 423
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.11 E-value=4.6e-11 Score=124.91 Aligned_cols=117 Identities=31% Similarity=0.442 Sum_probs=91.2
Q ss_pred CcCcceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccccC
Q 041082 408 GFGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 408 g~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.+|.|||++ .+.+...|+|++++.-...+.....|+.+++ -+.|||+.+|+|.+.-|.
T Consensus 27 TygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~- 105 (829)
T KOG0576|consen 27 TYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHV- 105 (829)
T ss_pred cccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeee-
Confidence 378899987 4678999999998765433333333332211 146999999999887653
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
-..++..+..-++....+|++|+| +..-+|||||-.||++.+.+.+|++|||.+..++.
T Consensus 106 TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 106 TGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred cccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh
Confidence 235788888888899999999999 66779999999999999999999999999877653
No 424
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.09 E-value=2.9e-10 Score=110.30 Aligned_cols=120 Identities=35% Similarity=0.487 Sum_probs=96.9
Q ss_pred CCcCcceEEEecC-CceeeeEEechhhhh-hhhhHHHHHHHHH--------------------hhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKARIQD-GMKVAVKVFDLQYER-AFKSFDVACDMMK--------------------KLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~l~~-g~~vavK~l~~~~~~-~~~~f~~e~~~~~--------------------~Lv~ey~~~gsL~~~l~ 464 (639)
.+++.+|++.... +..+++|.+...... ..+.+..+++..+ .+++||+++++|.+++.
T Consensus 10 g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 89 (225)
T smart00221 10 GAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLR 89 (225)
T ss_pred CCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHH
Confidence 4578899998875 789999998765443 4455555655422 26789999999999887
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~ 529 (639)
.....+++.....++.++++++.|+| ..+++|+|+++.||+++.++.++++|||.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 90 KKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred hcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 53333889999999999999999999 558999999999999999999999999999876543
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.08 E-value=3.2e-10 Score=110.62 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=83.9
Q ss_pred CCcCcceEEE--ecCCceeeeEEechhhhh------------------------hhhhHHHHHHHH--------------
Q 041082 407 SGFGSIYKAR--IQDGMKVAVKVFDLQYER------------------------AFKSFDVACDMM-------------- 446 (639)
Q Consensus 407 ~g~g~vy~~~--l~~g~~vavK~l~~~~~~------------------------~~~~f~~e~~~~-------------- 446 (639)
.++|.||++. ..+|..+|+|.+...... ....+..|...+
T Consensus 39 G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~~~ 118 (237)
T smart00090 39 GKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPKPI 118 (237)
T ss_pred CcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Confidence 4578999998 678999999998754210 001122333332
Q ss_pred ----HhhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCC-eEeecCCCCceeecCCcceeecccc
Q 041082 447 ----KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTP-IIHCDLKLSNVLLGNNMVAHLSDFG 521 (639)
Q Consensus 447 ----~~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~-i~h~dlk~~nill~~~~~~~i~dfg 521 (639)
..+||||++++++....... ..++..+...++.+++.+++|+| ..+ |+||||||.||+++ ++++++.|||
T Consensus 119 ~~~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg 193 (237)
T smart00090 119 AWRRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVS 193 (237)
T ss_pred EecCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEECh
Confidence 23788999998886654221 23445556789999999999999 666 99999999999999 8899999999
Q ss_pred ccccc
Q 041082 522 MAKLL 526 (639)
Q Consensus 522 la~~~ 526 (639)
.|...
T Consensus 194 ~a~~~ 198 (237)
T smart00090 194 QSVEL 198 (237)
T ss_pred hhhcc
Confidence 98854
No 426
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.05 E-value=2.1e-10 Score=121.87 Aligned_cols=195 Identities=33% Similarity=0.414 Sum_probs=142.0
Q ss_pred EEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCc-ccceeeccCCcCCCCCCccccCCCCCcEEecccc
Q 041082 56 TLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMS-SLLSIYFNNNTLFGEIPEELGNLAELETLWLQNN 134 (639)
Q Consensus 56 ~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 134 (639)
.+++..+.+... ...+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 466776666432 233556678888888888888 6777777775 8899999988876 45567888888999999999
Q ss_pred cCccccCccccCCCCCCEEecCCCCCCCCC----C-CCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCccc
Q 041082 135 FLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ----I-PNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIPNT 209 (639)
Q Consensus 135 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 209 (639)
+++ .+|.....+++|+.|++++|.++.++ . ..|+.|.+++|.+. ..+..+.++.++..+.+.+|++... +..
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~~ 250 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PES 250 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cch
Confidence 887 45555557888888999999888754 2 34888888888533 4556677788888888888887653 556
Q ss_pred cCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhh
Q 041082 210 FGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEI 270 (639)
Q Consensus 210 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~ 270 (639)
++.++.++.|++++|.++.... +. ...+++.++++++.+....+...
T Consensus 251 ~~~l~~l~~L~~s~n~i~~i~~-------~~-------~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 251 IGNLSNLETLDLSNNQISSISS-------LG-------SLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hccccccceecccccccccccc-------cc-------ccCccCEEeccCccccccchhhh
Confidence 7788888899998888876532 11 12367788888888877666544
No 427
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=2e-10 Score=116.44 Aligned_cols=121 Identities=26% Similarity=0.312 Sum_probs=84.3
Q ss_pred CCCcCcceEEEecCCc-eeeeEEechhhh---hhhhhHHHHHHHH--------------------HhhhhhcCCCCCchh
Q 041082 406 FSGFGSIYKARIQDGM-KVAVKVFDLQYE---RAFKSFDVACDMM--------------------KKLVLEYMPHGSLEK 461 (639)
Q Consensus 406 l~g~g~vy~~~l~~g~-~vavK~l~~~~~---~~~~~f~~e~~~~--------------------~~Lv~ey~~~gsL~~ 461 (639)
..|||.|-........ ..|+|.+...+. ......-.|-.+| -++.||-+-+|.+-.
T Consensus 430 vGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWT 509 (732)
T KOG0614|consen 430 VGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWT 509 (732)
T ss_pred cCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhh
Confidence 4678888766654332 367776654331 1111222222221 134567777888888
Q ss_pred ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccccC
Q 041082 462 CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 462 ~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~~~ 530 (639)
.|+... .++-.+..-++..+.+|++||| ..+||.|||||.|.+||.++.+|+.|||+|+.+..+.
T Consensus 510 iLrdRg-~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 510 ILRDRG-SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hhhhcC-CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 776533 4555555557778999999999 8899999999999999999999999999999987654
No 428
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.03 E-value=1.4e-10 Score=106.02 Aligned_cols=86 Identities=31% Similarity=0.373 Sum_probs=22.4
Q ss_pred CCCCCCCCEEeccCCcCCccCCcccc-CCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccc-cCCCC
Q 041082 72 LGNLSSLQTLDLSFNWFSGSIPSSIF-NMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSI-FNLSS 149 (639)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~ 149 (639)
+.+..++++|+|++|.|+. + +.++ .+.+|+.|+|++|.+... +.+..++.|++|+|++|+++.. ++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCcc-ccchHHhCCc
Confidence 3444566777777777763 3 2444 466777777777777643 2466677777777777777643 2233 35677
Q ss_pred CCEEecCCCCCCC
Q 041082 150 LSDLDLSHNNLTD 162 (639)
Q Consensus 150 L~~L~Ls~N~l~~ 162 (639)
|++|+|++|+|..
T Consensus 90 L~~L~L~~N~I~~ 102 (175)
T PF14580_consen 90 LQELYLSNNKISD 102 (175)
T ss_dssp --EEE-TTS---S
T ss_pred CCEEECcCCcCCC
Confidence 7777777777665
No 429
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=2.2e-10 Score=104.74 Aligned_cols=105 Identities=28% Similarity=0.433 Sum_probs=41.6
Q ss_pred cEEEEEeCCCCCcccCCcCCC-CCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccc-cCCCCCcEEe
Q 041082 53 RVTTLNISGLSLTSTIPSELG-NLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEEL-GNLAELETLW 130 (639)
Q Consensus 53 ~v~~L~L~~~~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ 130 (639)
+++.|+|.+|.++.+ ..++ .+.+|+.|+|++|.|+. ++ .+..++.|++|++++|+++.. ++.+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSI-SEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCcc-ccchHHhCCcCCEEE
Confidence 568899999999753 3465 68899999999999985 43 688899999999999999864 4444 4689999999
Q ss_pred cccccCccccC-ccccCCCCCCEEecCCCCCCC
Q 041082 131 LQNNFLTGTIH-SSIFNLSSLSDLDLSHNNLTD 162 (639)
Q Consensus 131 L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~ 162 (639)
|++|+|...-. ..+..+++|+.|+|.+|.++.
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 99999975322 346677888888888887764
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.01 E-value=6.6e-10 Score=105.90 Aligned_cols=111 Identities=18% Similarity=0.129 Sum_probs=80.4
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh----------------------hhhHHHHHHHH------------------
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA----------------------FKSFDVACDMM------------------ 446 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~----------------------~~~f~~e~~~~------------------ 446 (639)
.++|.||++...+|..++||++....... ...+..|...+
T Consensus 26 G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~~~~ 105 (198)
T cd05144 26 GKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPIDWNR 105 (198)
T ss_pred CcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceeecCC
Confidence 45788999998889999999876432100 00112222221
Q ss_pred HhhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 447 KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 447 ~~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
..+||||++++++...... .....++.+++.++.++| ..+|+||||||.||++++++.++++|||++.-.
T Consensus 106 ~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 106 HAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred ceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 1357888888888665321 223568889999999999 578999999999999999999999999999654
Q ss_pred c
Q 041082 527 L 527 (639)
Q Consensus 527 ~ 527 (639)
.
T Consensus 176 ~ 176 (198)
T cd05144 176 D 176 (198)
T ss_pred C
Confidence 4
No 431
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.01 E-value=7.2e-11 Score=112.17 Aligned_cols=170 Identities=22% Similarity=0.270 Sum_probs=85.0
Q ss_pred cEEEEEeCCCC--------CcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCC
Q 041082 53 RVTTLNISGLS--------LTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLA 124 (639)
Q Consensus 53 ~v~~L~L~~~~--------l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 124 (639)
++..|..++.. +...+|-.+.-+++|+++.+|.+.-.. |-.-...-+.|+++...+..+. ..|. +--++
T Consensus 183 ~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~ 259 (490)
T KOG1259|consen 183 QLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQ-DVPS-LLPET 259 (490)
T ss_pred heeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhh-eeceeecCchhheeeeeccccc-cccc-ccchh
Confidence 56677666531 122344455566777777777664331 1111122244555555443322 1111 11111
Q ss_pred CCcEEeccc-ccCccccCccccCCCCCCEEecCCCCCCCCC-----CCCccEEEccCCccCccCCccccCCCCCcEEEcc
Q 041082 125 ELETLWLQN-NFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ-----IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQ 198 (639)
Q Consensus 125 ~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-----l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 198 (639)
.+..++-+. .-..|..-..+.....|++||||+|.|+.+. +|.++.|++|.|.+... ..+..+++|+.||||
T Consensus 260 ~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS 337 (490)
T KOG1259|consen 260 ILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLS 337 (490)
T ss_pred hhcCccCCCCCccCCceEEecchHhhhhhccccccchhhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecc
Confidence 111111110 1112222223334455666677777666542 56667777777766522 125566777777777
Q ss_pred cCCCcccCccccCCCCCCCEEEccCCCCCC
Q 041082 199 KNSFFDLIPNTFGNLINLKRLNLYDNYLTS 228 (639)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 228 (639)
+|.++... .+-..+.+++.|.|+.|.+..
T Consensus 338 ~N~Ls~~~-Gwh~KLGNIKtL~La~N~iE~ 366 (490)
T KOG1259|consen 338 GNLLAECV-GWHLKLGNIKTLKLAQNKIET 366 (490)
T ss_pred cchhHhhh-hhHhhhcCEeeeehhhhhHhh
Confidence 77775442 344466677777777776643
No 432
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.90 E-value=2.7e-09 Score=99.69 Aligned_cols=109 Identities=18% Similarity=0.120 Sum_probs=78.0
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh----hhhHHHHHHHHHh-----------------hhhhcCCCCCchhcccc
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA----FKSFDVACDMMKK-----------------LVLEYMPHGSLEKCLYS 465 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~----~~~f~~e~~~~~~-----------------Lv~ey~~~gsL~~~l~~ 465 (639)
.+||.||...- ++..+..+.+....... ..-+..|+++++. ++|+|+.+.+|......
T Consensus 13 ~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~~ 91 (218)
T PRK12274 13 DTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGAAMYQRPPR 91 (218)
T ss_pred CCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCccHHhhhhh
Confidence 56888986555 56666666665443211 1135667777543 56788888787654321
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecC-CCCceeecCCcceeecccccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDL-KLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dl-k~~nill~~~~~~~i~dfgla~~~~ 527 (639)
....++.+++++++|+| ..+|+|||| |+.||+++.++.++|.|||+|....
T Consensus 92 --------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 92 --------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred --------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 12356778899999999 778999999 7999999999999999999998543
No 433
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.89 E-value=2.7e-09 Score=102.85 Aligned_cols=109 Identities=27% Similarity=0.360 Sum_probs=80.8
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhh--------hhhhHHHHHHHHH--------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYER--------AFKSFDVACDMMK--------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~--------~~~~f~~e~~~~~--------------------~Lv~ey~~~gs 458 (639)
+++|.||++.. .|..+++|........ ....+..|+..+. .++|||+++++
T Consensus 7 G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~ 85 (211)
T PRK14879 7 GAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEP 85 (211)
T ss_pred CceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcC
Confidence 35788999987 5667888875422110 0112333333321 26789999999
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
|.+++... .+ .+..++.+++.+++++| ..+++|||++|.||+++ ++.+++.|||+++.
T Consensus 86 L~~~~~~~----~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 86 LKDLINSN----GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred HHHHHHhc----cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 98887532 23 78899999999999999 67899999999999999 78899999999874
No 434
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.89 E-value=1.6e-09 Score=104.34 Aligned_cols=116 Identities=23% Similarity=0.281 Sum_probs=83.4
Q ss_pred HhhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 447 KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 447 ~~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.++|+|||.. ++...++- .+|=.+...|..|+.+|+.||| +.+|+||||||+||++..+...||.|||+|+-.
T Consensus 96 ~y~v~e~m~~-nl~~vi~~---elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM---ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH---hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhccc
Confidence 4689999964 78776652 3566777889999999999999 788999999999999999999999999999865
Q ss_pred cccCCCcccccccc---ccccc-cCCCCCCCccCCCccchHHHHHhhC
Q 041082 527 LKEDQSFTQNTNTC---HHRIY-GTRRNPQMNFFSGEMTLKSWVNDLL 570 (639)
Q Consensus 527 ~~~~~~~~~~~~~~---~~dvy-Gtg~~p~~~~~~~~~~l~~~~~~~~ 570 (639)
..+ ...+..+.+. ...|- |+|-++.-++++.|..+.+.++..+
T Consensus 169 ~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~V 215 (369)
T KOG0665|consen 169 DTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTV 215 (369)
T ss_pred Ccc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceE
Confidence 433 1111111111 11111 5666666677777777777665433
No 435
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.88 E-value=3.9e-10 Score=112.73 Aligned_cols=208 Identities=23% Similarity=0.237 Sum_probs=119.8
Q ss_pred CCCCCCEEeccCCcCCccCC--ccccCCcccceeeccCCcCCCCCC--ccccCCCCCcEEecccccCccccCcc-ccCCC
Q 041082 74 NLSSLQTLDLSFNWFSGSIP--SSIFNMSSLLSIYFNNNTLFGEIP--EELGNLAELETLWLQNNFLTGTIHSS-IFNLS 148 (639)
Q Consensus 74 ~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~ 148 (639)
++++|+...|.+.... ..+ .-...+++++.||||+|-+..--| .-...||+|+.|+|+.|++....... -..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 5667777777766654 222 244567777777777776654322 22346777777777777775333221 12456
Q ss_pred CCCEEecCCCCCCC-------CCCCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccCc-cccCCCCCCCEEE
Q 041082 149 SLSDLDLSHNNLTD-------VQIPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLIP-NTFGNLINLKRLN 220 (639)
Q Consensus 149 ~L~~L~Ls~N~l~~-------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ 220 (639)
+|+.|.|+.+.|+. ...|+|+.|+|..|...+........+..|+.|||++|++..... ...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 67777777777764 236777777777775322222223345567777777776644321 2345666667776
Q ss_pred ccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCcccc--ccccCCc
Q 041082 221 LYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSIP--ITLCKLQ 298 (639)
Q Consensus 221 Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~ 298 (639)
++.+.+..... + . +...+....+++|++|+++.|++.. .+ ..+..++
T Consensus 278 ls~tgi~si~~----~----d----------------------~~s~~kt~~f~kL~~L~i~~N~I~~-w~sl~~l~~l~ 326 (505)
T KOG3207|consen 278 LSSTGIASIAE----P----D----------------------VESLDKTHTFPKLEYLNISENNIRD-WRSLNHLRTLE 326 (505)
T ss_pred ccccCcchhcC----C----C----------------------ccchhhhcccccceeeecccCcccc-ccccchhhccc
Confidence 66666554310 0 0 0011123456788888888888752 22 2234456
Q ss_pred CCcEEEccCCcCCCC
Q 041082 299 KLQLLSFVDNKLEGP 313 (639)
Q Consensus 299 ~L~~L~l~~N~l~~~ 313 (639)
+|+.|.+..|.+...
T Consensus 327 nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 327 NLKHLRITLNYLNKE 341 (505)
T ss_pred hhhhhhccccccccc
Confidence 677777777777643
No 436
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=3.1e-09 Score=102.27 Aligned_cols=73 Identities=33% Similarity=0.426 Sum_probs=62.2
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+||||.-+|.|..+|... +.++..+..-+...|..||.||| +..||.||+|..|.+||+|+..||+|||+.+-
T Consensus 245 FVMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchh
Confidence 699999999999888653 34555544456677899999999 67899999999999999999999999999874
No 437
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.85 E-value=4.2e-09 Score=100.47 Aligned_cols=106 Identities=22% Similarity=0.314 Sum_probs=77.8
Q ss_pred CCcCcceEEEecCCceeeeEEechhhh--------hhhhhHHHHHHHHH--------------------hhhhhcCCCCC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYE--------RAFKSFDVACDMMK--------------------KLVLEYMPHGS 458 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~--------~~~~~f~~e~~~~~--------------------~Lv~ey~~~gs 458 (639)
+++|.||++.. .+..+++|....... .....+..|+..+. .+|+||+++++
T Consensus 5 G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~ 83 (199)
T TIGR03724 5 GAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKP 83 (199)
T ss_pred CceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCcc
Confidence 45788999985 467888887542210 01123334444422 36789999988
Q ss_pred chhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 459 LEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 459 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
|.+.+..... .++.+++++++++| ..+++|||++|.||+++ ++.+++.|||+++.
T Consensus 84 l~~~~~~~~~--------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 84 LKDVIEEGND--------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred HHHHHhhcHH--------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 8877643211 78999999999999 77899999999999999 88999999999875
No 438
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.84 E-value=5.9e-09 Score=98.35 Aligned_cols=115 Identities=19% Similarity=0.167 Sum_probs=78.9
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh--hhhH----------------------HHHHHHH----------------
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA--FKSF----------------------DVACDMM---------------- 446 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~--~~~f----------------------~~e~~~~---------------- 446 (639)
.++|.||++...++..+|+|++....... ...+ ..+...+
T Consensus 8 G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~ 87 (187)
T cd05119 8 GKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKPIDL 87 (187)
T ss_pred ccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCceEec
Confidence 45789999998889999999876432110 0000 1111111
Q ss_pred --HhhhhhcCCCCCchh-ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccc
Q 041082 447 --KKLVLEYMPHGSLEK-CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523 (639)
Q Consensus 447 --~~Lv~ey~~~gsL~~-~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla 523 (639)
..+|+||++++.+.. .+... ... ....+++.+++.++.++|. ..+|+||||||.||+++ ++.+++.|||.+
T Consensus 88 ~~~~lv~e~~~g~~~~~~~l~~~--~~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~~~~liDfg~a 161 (187)
T cd05119 88 NRHVLVMEFIGGDGIPAPRLKDV--RLL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DGKVYIIDVPQA 161 (187)
T ss_pred CCCEEEEEEeCCCCccChhhhhh--hhc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CCcEEEEECccc
Confidence 126889998865432 12110 011 4567889999999999993 17899999999999999 999999999999
Q ss_pred cccc
Q 041082 524 KLLL 527 (639)
Q Consensus 524 ~~~~ 527 (639)
....
T Consensus 162 ~~~~ 165 (187)
T cd05119 162 VEID 165 (187)
T ss_pred cccc
Confidence 7543
No 439
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.84 E-value=3.2e-10 Score=107.83 Aligned_cols=136 Identities=28% Similarity=0.283 Sum_probs=101.4
Q ss_pred ccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEEecCCCCCCCC-----C
Q 041082 90 GSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDV-----Q 164 (639)
Q Consensus 90 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----~ 164 (639)
|..-..+..+..|++||||+|.|+ .+.+++.-+|.++.|++++|.+... +.+..+++|+.||||+|.++.+ .
T Consensus 274 G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~Gwh~K 350 (490)
T KOG1259|consen 274 GSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVGWHLK 350 (490)
T ss_pred CceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhhhHhh
Confidence 333344455677888888888775 4566777778888888888888743 3477788888888888887764 4
Q ss_pred CCCccEEEccCCccCccCCccccCCCCCcEEEcccCCCcccC-ccccCCCCCCCEEEccCCCCCCCC
Q 041082 165 IPNLENLLLWGNNFSGAIPHFIFNASKLSILELQKNSFFDLI-PNTFGNLINLKRLNLYDNYLTSST 230 (639)
Q Consensus 165 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~ 230 (639)
+.++++|.|++|.+... +.+..+-+|..||+++|++.... -..++++|.|+.+.|.+|.+.+.+
T Consensus 351 LGNIKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 351 LGNIKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hcCEeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 77888888888877421 23556778899999999985432 246899999999999999998764
No 440
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=3.1e-09 Score=79.80 Aligned_cols=59 Identities=44% Similarity=0.488 Sum_probs=28.9
Q ss_pred ccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEEecCCCC
Q 041082 101 SLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHNN 159 (639)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 159 (639)
+|+.|++++|++....+..|.++++|++|++++|.++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444445555555555555555554444455555555555555444
No 441
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=7.4e-10 Score=110.81 Aligned_cols=204 Identities=22% Similarity=0.258 Sum_probs=115.5
Q ss_pred CCcccceeeccCCcCCCCCC--ccccCCCCCcEEecccccCccccC--ccccCCCCCCEEecCCCCCCCC-------CCC
Q 041082 98 NMSSLLSIYFNNNTLFGEIP--EELGNLAELETLWLQNNFLTGTIH--SSIFNLSSLSDLDLSHNNLTDV-------QIP 166 (639)
Q Consensus 98 ~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~-------~l~ 166 (639)
++.+|+...|.+.... ..+ .....+++++.|||+.|-+....| .....|++|+.|+|+.|.+... .++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 5666777777666543 222 245567777777777776654332 2345667777777777766532 245
Q ss_pred CccEEEccCCccCcc-CCccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcch
Q 041082 167 NLENLLLWGNNFSGA-IPHFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYL 245 (639)
Q Consensus 167 ~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l 245 (639)
.|+.|.|+.|.++-. +-..+..+++|+.|+|+.|.....-......+..|+.|+|++|++-...
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~--------------- 262 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFD--------------- 262 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccc---------------
Confidence 666666666665411 1111223455666666666422222222334555555555555543321
Q ss_pred hhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCccc-ccc-----ccCCcCCcEEEccCCcCCCCC-chhh
Q 041082 246 EQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGSI-PIT-----LCKLQKLQLLSFVDNKLEGPI-PYEF 318 (639)
Q Consensus 246 ~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~-----~~~l~~L~~L~l~~N~l~~~~-p~~~ 318 (639)
.....+.++.|..|+++.+.+...- |+. ...+++|++|++..|++.... -..+
T Consensus 263 --------------------~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l 322 (505)
T KOG3207|consen 263 --------------------QGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHL 322 (505)
T ss_pred --------------------cccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchh
Confidence 1123456667777777777665321 222 245689999999999985321 1234
Q ss_pred cCCCCCcEEECCCCcCccc
Q 041082 319 CRLASLYELDLSGNKLSGS 337 (639)
Q Consensus 319 ~~l~~L~~L~Ls~N~l~~~ 337 (639)
..+.+|+.|....|.++..
T Consensus 323 ~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 323 RTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hccchhhhhhccccccccc
Confidence 4567788888888888743
No 442
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.4e-09 Score=79.61 Aligned_cols=61 Identities=36% Similarity=0.447 Sum_probs=48.5
Q ss_pred CCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccC
Q 041082 76 SSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFL 136 (639)
Q Consensus 76 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 136 (639)
++|++|++++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888866666778888888888888888877777888888888888888865
No 443
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.79 E-value=7e-10 Score=108.11 Aligned_cols=237 Identities=19% Similarity=0.260 Sum_probs=117.2
Q ss_pred CcEEEEEeCCCCCcc----cCCcCCCCCCCCCEEeccCC---cCCccCCccc-------cCCcccceeeccCCcCCCCCC
Q 041082 52 YRVTTLNISGLSLTS----TIPSELGNLSSLQTLDLSFN---WFSGSIPSSI-------FNMSSLLSIYFNNNTLFGEIP 117 (639)
Q Consensus 52 ~~v~~L~L~~~~l~~----~~p~~l~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~~N~l~~~~p 117 (639)
..++.|+|++|.+.. .+...+.+.+.|+.-++|.- ++...+|+.+ -..+.|+.|+||.|.|.-.-+
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 357788888887742 33345666677777777642 1222334332 233456666666666543333
Q ss_pred cc----ccCCCCCcEEecccccCccccC-------------ccccCCCCCCEEecCCCCCCCCCCCCccEEEccCCccCc
Q 041082 118 EE----LGNLAELETLWLQNNFLTGTIH-------------SSIFNLSSLSDLDLSHNNLTDVQIPNLENLLLWGNNFSG 180 (639)
Q Consensus 118 ~~----~~~l~~L~~L~L~~N~l~~~~p-------------~~~~~l~~L~~L~Ls~N~l~~~~l~~L~~L~L~~N~l~~ 180 (639)
.. +.++.+|+.|.|.+|.+...-. ....+-++|+.+..+.|.+.+... .
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga--------------~ 175 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGA--------------T 175 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccH--------------H
Confidence 22 2345566666666665531100 011223344444444444443110 0
Q ss_pred cCCccccCCCCCcEEEcccCCCcc----cCccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEE
Q 041082 181 AIPHFIFNASKLSILELQKNSFFD----LIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFS 256 (639)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~ 256 (639)
.+...|...+.|+.+.++.|.+.. .+...|..+++|+.|||.+|-|+..... ..-..+ ...++|+.++
T Consensus 176 ~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~-~LakaL-------~s~~~L~El~ 247 (382)
T KOG1909|consen 176 ALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV-ALAKAL-------SSWPHLRELN 247 (382)
T ss_pred HHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH-HHHHHh-------cccchheeec
Confidence 011223334455555555555421 1122345566666666666655432100 000000 1123456666
Q ss_pred eecCcccccc----chhh-cCCCCCCEEECCCCCCCcc----ccccccCCcCCcEEEccCCcC
Q 041082 257 MFNCNISGGI----LEEI-SNLTNLTAIYLAGNKLNGS----IPITLCKLQKLQLLSFVDNKL 310 (639)
Q Consensus 257 l~~n~l~~~~----~~~~-~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l 310 (639)
+++|.+...= .+.+ ...++|+.|.|.+|.++.. +...+...+.|..|++++|.+
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 6666654321 1222 2357788888888877632 223344567888888888888
No 444
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.78 E-value=7e-09 Score=114.27 Aligned_cols=65 Identities=29% Similarity=0.432 Sum_probs=57.0
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+||||+++++|.+++. .+..++.+++++++||| ..+++|||+||+||++ +++.++++|||+++..
T Consensus 413 lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 6889999999877653 45789999999999999 6789999999999999 6788999999999853
No 445
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.78 E-value=6.5e-10 Score=118.43 Aligned_cols=124 Identities=29% Similarity=0.360 Sum_probs=63.1
Q ss_pred cccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEEecCCCCCCCCC----CCCccEEEccC
Q 041082 100 SSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ----IPNLENLLLWG 175 (639)
Q Consensus 100 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~----l~~L~~L~L~~ 175 (639)
..++.+.+..|.+.. +-..+..+++|+.|+|.+|+|..+.. .+..+++|++|+|++|.|+.+. ++.|+.|++++
T Consensus 72 ~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 72 TSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSG 149 (414)
T ss_pred HhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccccchhhccchhhheecc
Confidence 333444444444432 12224444555555555555543321 1444555555555555554432 44455555555
Q ss_pred CccCccCCccccCCCCCcEEEcccCCCcccCc-cccCCCCCCCEEEccCCCCCC
Q 041082 176 NNFSGAIPHFIFNASKLSILELQKNSFFDLIP-NTFGNLINLKRLNLYDNYLTS 228 (639)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~ 228 (639)
|.++.. ..+..+..|+.+++++|.+....+ . ...+.+++.+++.+|.+..
T Consensus 150 N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 150 NLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred Ccchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 555422 122335667777777777665544 2 3566777777777776654
No 446
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.77 E-value=1.9e-09 Score=105.10 Aligned_cols=111 Identities=22% Similarity=0.286 Sum_probs=60.0
Q ss_pred ccCccEEEeecCcccccc----chhhcCCCCCCEEECCCCCCCcc----ccccccCCcCCcEEEccCCcCCCC----Cch
Q 041082 249 SQSLEVFSMFNCNISGGI----LEEISNLTNLTAIYLAGNKLNGS----IPITLCKLQKLQLLSFVDNKLEGP----IPY 316 (639)
Q Consensus 249 ~~~l~~l~l~~n~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~ 316 (639)
...|+++...+|.+...- -..+...+.|+.+.++.|.|... +...+..+++|+.||+..|-++.. +..
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 345666666666654321 22344556777777777766421 123455667777777777766532 233
Q ss_pred hhcCCCCCcEEECCCCcCcccCCccc-----cCCCCCCEEeCCCCcCc
Q 041082 317 EFCRLASLYELDLSGNKLSGSIPTCF-----GNQTSLRILSLDSNKLI 359 (639)
Q Consensus 317 ~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~ 359 (639)
+++.+++|+.|+++++.+...-...| ...++|++|.+.+|.++
T Consensus 236 aL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 45556666666666666543222111 12345555555555554
No 447
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.76 E-value=7.7e-10 Score=117.85 Aligned_cols=147 Identities=27% Similarity=0.284 Sum_probs=93.9
Q ss_pred CCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEE
Q 041082 74 NLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDL 153 (639)
Q Consensus 74 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (639)
.+..++.+++..|.+.. +-..+..+++|..|++.+|++.+. ...+..+++|++|+|++|+|+.+. .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 45666667777777763 334466777777888887777643 222666777888888888777553 35566667778
Q ss_pred ecCCCCCCCCC----CCCccEEEccCCccCccCC-ccccCCCCCcEEEcccCCCcccCccccCCCCCCCEEEccCCCCC
Q 041082 154 DLSHNNLTDVQ----IPNLENLLLWGNNFSGAIP-HFIFNASKLSILELQKNSFFDLIPNTFGNLINLKRLNLYDNYLT 227 (639)
Q Consensus 154 ~Ls~N~l~~~~----l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 227 (639)
++++|.|+.+. ++.|+.+++++|.+...-+ . ...+.+++.+++.+|.+.... .+..+..+..+++..|.++
T Consensus 146 ~l~~N~i~~~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~--~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 146 NLSGNLISDISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIE--GLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eeccCcchhccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhccc--chHHHHHHHHhhcccccce
Confidence 88888776642 6677777788777765444 2 355677777777777775432 2333444444455555544
No 448
>PRK10345 hypothetical protein; Provisional
Probab=98.75 E-value=1.7e-08 Score=96.04 Aligned_cols=117 Identities=15% Similarity=0.217 Sum_probs=75.8
Q ss_pred cccCCCCCC---cCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHHh----------------------------
Q 041082 400 DLSMNNFSG---FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKK---------------------------- 448 (639)
Q Consensus 400 ~ls~N~l~g---~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~~---------------------------- 448 (639)
+|+...+-| ++.||. .+.....+||+.........+.+..|+..++.
T Consensus 3 ~L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 3 RLSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred ecCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 455544444 555674 33223346888765433344556666665432
Q ss_pred -hhhhc--CCCCCchhccccCCccCCHHHHHHHHHHHHHhh-hhhhccCCCCeEeecCCCCceeecC----Ccceeecc-
Q 041082 449 -LVLEY--MPHGSLEKCLYSSNYILDIFQRLNIMIDVALAL-EYLHFGYSTPIIHCDLKLSNVLLGN----NMVAHLSD- 519 (639)
Q Consensus 449 -Lv~ey--~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l-~~lh~~~~~~i~h~dlk~~nill~~----~~~~~i~d- 519 (639)
+|+|| +++|+|.+++... .++.. ..++.++..++ +||| ...|+||||||.||+++. +..++|+|
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 35677 4578888888542 24444 34567777777 8999 778999999999999974 34799999
Q ss_pred cccccc
Q 041082 520 FGMAKL 525 (639)
Q Consensus 520 fgla~~ 525 (639)
||.+.+
T Consensus 154 ~G~~~~ 159 (210)
T PRK10345 154 IGESTF 159 (210)
T ss_pred CCCcce
Confidence 555444
No 449
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.73 E-value=2.7e-08 Score=91.46 Aligned_cols=110 Identities=21% Similarity=0.378 Sum_probs=78.4
Q ss_pred cceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHHH-----------------------hhhhhcCCCCCchhccccC
Q 041082 411 SIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMK-----------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 411 ~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-----------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
.||.|. +.+...+.+|.+..... +.+.+|+.++. .||+||+.+.+...+-.
T Consensus 53 EVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-- 127 (338)
T KOG0668|consen 53 EVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-- 127 (338)
T ss_pred hHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh--
Confidence 344443 34567788888765432 34455555522 37899998877655432
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-CcceeeccccccccccccC
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~~~~~~~ 530 (639)
.++-....-...++..||.|.| +.+|.|||+||+||++|. .-+.++.|.|+|-+..++.
T Consensus 128 --tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~ 187 (338)
T KOG0668|consen 128 --TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 187 (338)
T ss_pred --hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCc
Confidence 2333344557788999999999 788999999999999996 4678999999999987654
No 450
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.71 E-value=6.6e-09 Score=108.21 Aligned_cols=71 Identities=30% Similarity=0.521 Sum_probs=58.3
Q ss_pred hhhhhcCCCCCchhccccCCccCCHH-HHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccc
Q 041082 448 KLVLEYMPHGSLEKCLYSSNYILDIF-QRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMA 523 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~~~l~~~-~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla 523 (639)
++||+|+++|++-.+|-.- ..+... .|+-| ..+++|+++.| .-+.|||||||.|||+|.|+.+|+.||||.
T Consensus 705 YFVMdYIPGGDmMSLLIrm-gIFeE~LARFYI-AEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRM-GIFEEDLARFYI-AELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred EEEEeccCCccHHHHHHHh-ccCHHHHHHHHH-HHHHHHHHHHH---hccceecccCccceEEccCCceeeeecccc
Confidence 4799999999998877532 234333 45545 45889999999 889999999999999999999999999985
No 451
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.68 E-value=1.5e-08 Score=115.44 Aligned_cols=267 Identities=27% Similarity=0.270 Sum_probs=153.4
Q ss_pred CcEEEEEeCCCC--CcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEE
Q 041082 52 YRVTTLNISGLS--LTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETL 129 (639)
Q Consensus 52 ~~v~~L~L~~~~--l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 129 (639)
.++++|-+.+|. +....+..|..++.|++|||++|.=-+.+|..+++|-+|++|++++..+. .+|..+++|+.|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 467888888876 44333345788999999999998877789999999999999999999886 789999999999999
Q ss_pred ecccccCccccCccccCCCCCCEEecCCCCCCC--C------CCCCccEEEccCCccCccCCccccCCCCCc----EEEc
Q 041082 130 WLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTD--V------QIPNLENLLLWGNNFSGAIPHFIFNASKLS----ILEL 197 (639)
Q Consensus 130 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~L 197 (639)
++..+.-...+|.....|.+|++|.+....... . .+..|+.+....... .+-.-+..+.+|. .+.+
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhh
Confidence 999888766677777789999999886554222 1 233444443322211 0001111222222 2222
Q ss_pred ccCCCcccCccccCCCCCCCEEEccCCCCCCCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCC
Q 041082 198 QKNSFFDLIPNTFGNLINLKRLNLYDNYLTSSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLT 277 (639)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~ 277 (639)
..+... ..+..++.+.+|+.|.+.++.+......+. .....+. ...++..+...++.... .+...--.++|+
T Consensus 702 ~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~--~~~~~~~----~f~~l~~~~~~~~~~~r-~l~~~~f~~~L~ 773 (889)
T KOG4658|consen 702 EGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWE--ESLIVLL----CFPNLSKVSILNCHMLR-DLTWLLFAPHLT 773 (889)
T ss_pred cccccc-eeecccccccCcceEEEEcCCCchhhcccc--cccchhh----hHHHHHHHHhhcccccc-ccchhhccCccc
Confidence 222222 234457788999999998888764321110 0000000 00001111111111110 112222346777
Q ss_pred EEECCCCCCCccccccccCCcCCcEEEccCCcCCCC-CchhhcCCCCCcEEEC
Q 041082 278 AIYLAGNKLNGSIPITLCKLQKLQLLSFVDNKLEGP-IPYEFCRLASLYELDL 329 (639)
Q Consensus 278 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~L 329 (639)
.|.+.++.....+......+..+..+.+..+.+.+. .-...+.++++..+.+
T Consensus 774 ~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 774 SLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred EEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEeccc
Confidence 777777766555555555555565555666665554 2233344444444433
No 452
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.67 E-value=3.8e-08 Score=94.13 Aligned_cols=107 Identities=17% Similarity=0.179 Sum_probs=77.2
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhhh---hh------HHHHHHHH----------------------------Hhh
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERAF---KS------FDVACDMM----------------------------KKL 449 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~~---~~------f~~e~~~~----------------------------~~L 449 (639)
+|+|.||.... ++..+++|.+........ .. +..|.... ..+
T Consensus 42 ~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~l 120 (232)
T PRK10359 42 IDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIM 120 (232)
T ss_pred CCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEE
Confidence 57888998666 466899999975443221 11 34443321 236
Q ss_pred hhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 450 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 450 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+|||+++.+|.++.. ++. ....+++.++..+| ..+++|||+||+||+++.++ +++.|||..+...
T Consensus 121 vmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~ 185 (232)
T PRK10359 121 LIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTA 185 (232)
T ss_pred EEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCccccc
Confidence 889999888877631 221 34558899999999 77899999999999999888 9999999887653
No 453
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.67 E-value=2.5e-08 Score=113.76 Aligned_cols=84 Identities=27% Similarity=0.249 Sum_probs=43.2
Q ss_pred CCCCEEeccCCcCCccCCccccCCcccceeeccCCc--CCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEE
Q 041082 76 SSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNT--LFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDL 153 (639)
Q Consensus 76 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 153 (639)
...+...+.+|.+. .++.... .+.|++|-+..|. +....++.|..|+.|++|||++|.=-+.+|..+++|.+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 44555555555554 2333222 2245555555554 332233335556666666666655545566666666666655
Q ss_pred ecCCCCCC
Q 041082 154 DLSHNNLT 161 (639)
Q Consensus 154 ~Ls~N~l~ 161 (639)
+|++..++
T Consensus 601 ~L~~t~I~ 608 (889)
T KOG4658|consen 601 DLSDTGIS 608 (889)
T ss_pred cccCCCcc
Confidence 55555544
No 454
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.67 E-value=2.2e-08 Score=98.89 Aligned_cols=162 Identities=19% Similarity=0.230 Sum_probs=99.1
Q ss_pred CchhccccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC--------------------Cccee
Q 041082 458 SLEKCLYSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN--------------------NMVAH 516 (639)
Q Consensus 458 sL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~--------------------~~~~~ 516 (639)
|+++.+.... ..+...+...|+.|+.++++||| ...++|-||||.|||+-. +..+|
T Consensus 176 S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~ 252 (415)
T KOG0671|consen 176 STFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIK 252 (415)
T ss_pred hHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceE
Confidence 6777776533 45788888999999999999999 788999999999999932 23478
Q ss_pred eccccccccccccCCC---cccc---------ccccccccc--c-------CCCCCCCccCCCccchHHHHHhhC---CC
Q 041082 517 LSDFGMAKLLLKEDQS---FTQN---------TNTCHHRIY--G-------TRRNPQMNFFSGEMTLKSWVNDLL---PI 572 (639)
Q Consensus 517 i~dfgla~~~~~~~~~---~~~~---------~~~~~~dvy--G-------tg~~p~~~~~~~~~~l~~~~~~~~---~~ 572 (639)
|.|||=|..-....+. ..+. ..+.++||| | ||..-... ..+-..| ..++..+ |.
T Consensus 253 vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt-Hen~EHL-aMMerIlGp~P~ 330 (415)
T KOG0671|consen 253 VIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT-HENLEHL-AMMERILGPIPS 330 (415)
T ss_pred EEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc-CCcHHHH-HHHHHhhCCCcH
Confidence 9999999876554422 0110 123388998 6 55542211 0111111 1111111 11
Q ss_pred Ccc-e----------eee-cc--ccc-------cc---cccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 041082 573 SVM-E----------VVD-VN--LLS-------ME---DKYFTTKKQCLSFVFNLAMECTAESPKQRINAKESVTR 624 (639)
Q Consensus 573 ~~~-~----------~~d-~~--l~~-------~~---~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~ 624 (639)
.+. . -+| ++ ..+ .+ ...+.....+..++++|....+..||.+|+|.+|++..
T Consensus 331 ~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 331 RMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 100 0 011 00 000 00 01122335677889999999999999999999999853
No 455
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.66 E-value=4.1e-08 Score=94.85 Aligned_cols=73 Identities=36% Similarity=0.451 Sum_probs=61.6
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+|.||+++|+|--++.. .+.++.....-+...|.-||.||| ..+|+.||+|..|||+|.++..|+.|||+.+-
T Consensus 328 fvieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred EEEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhc
Confidence 57899999999666653 234666665567778889999999 78899999999999999999999999999874
No 456
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.65 E-value=3.9e-08 Score=104.72 Aligned_cols=75 Identities=21% Similarity=0.230 Sum_probs=57.8
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHH-hhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVAL-ALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~-~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
|||||++++++.+......... .+.+++..+++ .+.++| ..+++|+|+||.||+++.++.+++.|||++..+.
T Consensus 235 LvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 235 LTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred EEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 7899999999987654211112 24567776666 456777 6789999999999999999999999999998775
Q ss_pred cc
Q 041082 528 KE 529 (639)
Q Consensus 528 ~~ 529 (639)
+.
T Consensus 309 ~~ 310 (437)
T TIGR01982 309 EE 310 (437)
T ss_pred HH
Confidence 43
No 457
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.65 E-value=3.6e-08 Score=97.86 Aligned_cols=74 Identities=32% Similarity=0.416 Sum_probs=63.4
Q ss_pred hhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 448 KLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++||||+.+|+|-.++..- ..+.....+-+|..||-||-||| +.+|+.||||..||+||.++.+||+|||+.+-
T Consensus 426 yFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccc
Confidence 3699999999997776542 23555566778999999999999 78899999999999999999999999999874
No 458
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.64 E-value=2.9e-08 Score=68.27 Aligned_cols=40 Identities=38% Similarity=0.876 Sum_probs=30.1
Q ss_pred hhHHHHHHHHHhcCCCCCCcccccCCCCC--CCCcCccceecC
Q 041082 8 NHLSFQVFVLKGHVTDDPTNFLAKNWNTS--STVCHWTGVSCD 48 (639)
Q Consensus 8 ~~~~~~ll~~k~~~~~~~~~~l~~~w~~~--~~~c~w~gv~c~ 48 (639)
+.+.+||++||+++..+|.+.+.+ |..+ ++||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~-W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSS-WNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT---TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCccccc-CCCcCCCCCeeeccEEeC
Confidence 468999999999997667778888 9987 799999999996
No 459
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.62 E-value=1.3e-07 Score=85.26 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=76.4
Q ss_pred CcCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHHhh----------------------hhhcCCCCCchhcccc
Q 041082 408 GFGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMKKL----------------------VLEYMPHGSLEKCLYS 465 (639)
Q Consensus 408 g~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~~L----------------------v~ey~~~gsL~~~l~~ 465 (639)
+++.+|++...+ ..+++|....... ...+..|...++.+ ++||++++.+..
T Consensus 10 ~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~---- 82 (155)
T cd05120 10 LTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDE---- 82 (155)
T ss_pred cccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeeccc----
Confidence 356788888754 6788888754332 23455555554433 333333332221
Q ss_pred CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 466 SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 466 ~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+++..+..++.+++++++++|.....+++|+|+++.||+++....+++.|||.++.
T Consensus 83 ----~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 83 ----VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ----CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 25677888999999999999965556899999999999999999999999999874
No 460
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.60 E-value=3.2e-07 Score=94.47 Aligned_cols=115 Identities=28% Similarity=0.345 Sum_probs=79.9
Q ss_pred CCcCcceEEEecCC--ceeeeEEechhhhhhhhhHHHHHHHHHhhh--------------------hhc----CCCCCch
Q 041082 407 SGFGSIYKARIQDG--MKVAVKVFDLQYERAFKSFDVACDMMKKLV--------------------LEY----MPHGSLE 460 (639)
Q Consensus 407 ~g~g~vy~~~l~~g--~~vavK~l~~~~~~~~~~f~~e~~~~~~Lv--------------------~ey----~~~gsL~ 460 (639)
.+||.||.+.-... ..+|+|.-..........+..|+..++.+. |.| +.+.+|.
T Consensus 29 G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~ 108 (322)
T KOG1164|consen 29 GGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLE 108 (322)
T ss_pred cCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHH
Confidence 46999999886543 467888765433222224444554433332 111 1133555
Q ss_pred hcccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC-----cceeeccccccc
Q 041082 461 KCLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN-----MVAHLSDFGMAK 524 (639)
Q Consensus 461 ~~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~-----~~~~i~dfgla~ 524 (639)
++... ....++-.+.++||.++..+|+++| ..+++||||||.|+.++.. ..+.+.|||+|+
T Consensus 109 dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 109 DLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 54432 2356888899999999999999999 7789999999999999864 468999999998
No 461
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.52 E-value=2.3e-07 Score=90.82 Aligned_cols=69 Identities=22% Similarity=0.260 Sum_probs=55.0
Q ss_pred hhhhcCCC-CCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 449 LVLEYMPH-GSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 449 Lv~ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+|+||+++ .+|.+++... .++.. .+.++++++.+|| ..+|+||||||.|||++.++.+++.|||.++..
T Consensus 123 lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 123 ILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred EEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 67788886 5777776432 23332 3567899999999 778999999999999999889999999998863
No 462
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.43 E-value=8.1e-07 Score=91.09 Aligned_cols=118 Identities=27% Similarity=0.369 Sum_probs=78.7
Q ss_pred cCcceEEEe-cCCceeeeEEechhhhhhhhhHHHHHHHHHh--------------------------hhhhcCCCCCchh
Q 041082 409 FGSIYKARI-QDGMKVAVKVFDLQYERAFKSFDVACDMMKK--------------------------LVLEYMPHGSLEK 461 (639)
Q Consensus 409 ~g~vy~~~l-~~g~~vavK~l~~~~~~~~~~f~~e~~~~~~--------------------------Lv~ey~~~gsL~~ 461 (639)
|++|..+.- .-|+.||||++..... ..+.=..|+++++. ||+|-+.- +|.+
T Consensus 445 Fs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Lsl-NLRe 522 (752)
T KOG0670|consen 445 FSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSL-NLRE 522 (752)
T ss_pred eeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhc-hHHH
Confidence 455555543 3468999999864321 11111223333222 56665543 6777
Q ss_pred cccc--CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCC-cceeeccccccccccccCC
Q 041082 462 CLYS--SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNN-MVAHLSDFGMAKLLLKEDQ 531 (639)
Q Consensus 462 ~l~~--~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~-~~~~i~dfgla~~~~~~~~ 531 (639)
.|.. ....|.......+|.|+--||..|- .-+|+|.||||.|||+.+. ...|+||||-|....+...
T Consensus 523 vLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei 592 (752)
T KOG0670|consen 523 VLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI 592 (752)
T ss_pred HHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccccccccccc
Confidence 7754 2334556666778899999999998 5679999999999999975 5679999999988776543
No 463
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.42 E-value=3.4e-07 Score=103.31 Aligned_cols=116 Identities=30% Similarity=0.368 Sum_probs=88.2
Q ss_pred CCcCcceEEEecCCceeeeEEechhhhhh----------hh-----hHHHHHHH-----HHhhhhhcCCCCCchhccccC
Q 041082 407 SGFGSIYKARIQDGMKVAVKVFDLQYERA----------FK-----SFDVACDM-----MKKLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 407 ~g~g~vy~~~l~~g~~vavK~l~~~~~~~----------~~-----~f~~e~~~-----~~~Lv~ey~~~gsL~~~l~~~ 466 (639)
.++|.||+|.-.+|..+|+|+=......- .+ .|...+.. -..||.||.+-|+|-+++. .
T Consensus 709 g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N-~ 787 (974)
T KOG1166|consen 709 GSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN-T 787 (974)
T ss_pred ccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhc-c
Confidence 45899999998889999999754432111 11 11111111 1237889999999999887 4
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-------Ccceeeccccccccc
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-------NMVAHLSDFGMAKLL 526 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-------~~~~~i~dfgla~~~ 526 (639)
.+.++|.-.+.++.++++-++.|| ...||||||||.|.+|.. ....+|.|||.+--+
T Consensus 788 ~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 788 NKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred CCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 567899999999999999999999 778999999999999942 356799999988543
No 464
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.37 E-value=5.4e-07 Score=83.73 Aligned_cols=117 Identities=26% Similarity=0.336 Sum_probs=82.2
Q ss_pred CCcCcceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHH---------------------HhhhhhcCCCCCchhccc
Q 041082 407 SGFGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMM---------------------KKLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 407 ~g~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~---------------------~~Lv~ey~~~gsL~~~l~ 464 (639)
..||.+|.+. +.+|..||+|.-..... .....-|..+- ..+||+.+ +.||.+++.
T Consensus 26 GSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfn 102 (341)
T KOG1163|consen 26 GSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFN 102 (341)
T ss_pred CchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHH
Confidence 3488999886 67899999997532211 11222222221 12566655 447777664
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC---Ccceeecccccccccccc
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN---NMVAHLSDFGMAKLLLKE 529 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~---~~~~~i~dfgla~~~~~~ 529 (639)
--.+.++..+.+-+|-|+..-++|+| ....+||||||.|.|.+- .....+.|||+|+-+-+.
T Consensus 103 fC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 103 FCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred HHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 43445777788889999999999999 666999999999999974 456789999999876543
No 465
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.35 E-value=4.1e-07 Score=91.24 Aligned_cols=108 Identities=29% Similarity=0.352 Sum_probs=80.7
Q ss_pred CcCcceEEEec----CCceeeeEEechhhhhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhc
Q 041082 408 GFGSIYKARIQ----DGMKVAVKVFDLQYERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 408 g~g~vy~~~l~----~g~~vavK~l~~~~~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~ 462 (639)
.|++||++... ....+|+|.+...... .....|++++. ..|+||+++-...++
T Consensus 48 sFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l 125 (418)
T KOG1167|consen 48 SFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDL 125 (418)
T ss_pred chhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHH
Confidence 47788888754 3578999988765432 22334444422 257899988777776
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-Ccceeeccccccc
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-NMVAHLSDFGMAK 524 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-~~~~~i~dfgla~ 524 (639)
..+ ++......+.....+||+++| ..+||||||||+|+|.+. -+.-.+.|||+|.
T Consensus 126 ~~~----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 126 YRS----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred Hhc----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHH
Confidence 543 556666677788899999999 889999999999999985 5777899999997
No 466
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.34 E-value=1.6e-06 Score=84.44 Aligned_cols=116 Identities=25% Similarity=0.339 Sum_probs=84.0
Q ss_pred cCcceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHHH---------------------hhhhhcCCCCCchhccccC
Q 041082 409 FGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMK---------------------KLVLEYMPHGSLEKCLYSS 466 (639)
Q Consensus 409 ~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~---------------------~Lv~ey~~~gsL~~~l~~~ 466 (639)
||.++.|. +-++.+||+|.-.... ...+...|...-+ .||+|.+ +.||.+++.-.
T Consensus 41 FG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~C 117 (449)
T KOG1165|consen 41 FGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLC 117 (449)
T ss_pred ceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHh
Confidence 66777665 4568899999643221 1234444444422 2666765 44787776545
Q ss_pred CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-----CcceeeccccccccccccC
Q 041082 467 NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-----NMVAHLSDFGMAKLLLKED 530 (639)
Q Consensus 467 ~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-----~~~~~i~dfgla~~~~~~~ 530 (639)
++.++..+.+-||.++..-++|+| ...+|.|||||.|+|++. ...+++.|||+|+.+.+..
T Consensus 118 gR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 118 GRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred cCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 566888888999999999999999 778999999999999974 3457899999999886543
No 467
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.29 E-value=7.8e-07 Score=98.05 Aligned_cols=72 Identities=31% Similarity=0.446 Sum_probs=62.1
Q ss_pred hhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 450 VLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 450 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+|||++. +|+..+-+. ..+....+..+..++.+|+.|+| ..+|.|||+|+.|+++...+.+||+|||.+...
T Consensus 399 ~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf 470 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVF 470 (601)
T ss_pred hhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceee
Confidence 4799998 998887643 24667777888999999999999 778999999999999999999999999988654
No 468
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.17 E-value=3.2e-06 Score=86.28 Aligned_cols=99 Identities=30% Similarity=0.301 Sum_probs=69.3
Q ss_pred cCcceEEE-ecCCceeeeEEechhhhhhhhhHHHHHHHHH--------------------------------hhhhhcCC
Q 041082 409 FGSIYKAR-IQDGMKVAVKVFDLQYERAFKSFDVACDMMK--------------------------------KLVLEYMP 455 (639)
Q Consensus 409 ~g~vy~~~-l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~--------------------------------~Lv~ey~~ 455 (639)
|.+||.+. .+....||+|+..-... ....-..|+..++ .+|+||+.
T Consensus 91 FSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLG 169 (590)
T KOG1290|consen 91 FSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLG 169 (590)
T ss_pred cceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhh
Confidence 66788876 56678999998753211 1111122333321 15777775
Q ss_pred CCCchhccccCC-ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC
Q 041082 456 HGSLEKCLYSSN-YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN 511 (639)
Q Consensus 456 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~ 511 (639)
. +|-.++..+. +.+......+|+.+|..||.|||..| +|||-||||.|||+..
T Consensus 170 d-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 170 D-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCS 223 (590)
T ss_pred h-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeec
Confidence 4 6666665533 34778888999999999999999987 5999999999999953
No 469
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.15 E-value=5.6e-06 Score=86.19 Aligned_cols=117 Identities=21% Similarity=0.282 Sum_probs=80.5
Q ss_pred CcCcceEEEecC-CceeeeEEechhhh--------hhhhhHHHHHHHHHhh----------hhhcCC-------------
Q 041082 408 GFGSIYKARIQD-GMKVAVKVFDLQYE--------RAFKSFDVACDMMKKL----------VLEYMP------------- 455 (639)
Q Consensus 408 g~g~vy~~~l~~-g~~vavK~l~~~~~--------~~~~~f~~e~~~~~~L----------v~ey~~------------- 455 (639)
.+|.|..+.... ...|.+|.+..... +-.+....|++++..| +.+|.+
T Consensus 573 AyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg 652 (772)
T KOG1152|consen 573 AYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHG 652 (772)
T ss_pred ccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCC
Confidence 467777776543 45677787643321 1123455566664432 112222
Q ss_pred -CCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccccc
Q 041082 456 -HGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLLK 528 (639)
Q Consensus 456 -~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~~ 528 (639)
+-+|.+++.. ...++.....-|..||+-|+++|| ..+|||||||-.||.+|.++-+|+.|||-|....+
T Consensus 653 ~gIDLFd~IE~-kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfgsaa~~ks 722 (772)
T KOG1152|consen 653 EGIDLFDFIEF-KPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKS 722 (772)
T ss_pred CCcchhhhhhc-cCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeeccchhhhcC
Confidence 3355555542 234677777889999999999999 77899999999999999999999999998876543
No 470
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.13 E-value=5.5e-06 Score=76.59 Aligned_cols=105 Identities=22% Similarity=0.213 Sum_probs=68.2
Q ss_pred cCcceEEEecCCceeeeEEechhhhhhhhhHHHHHHHHH-------------------hhhhhcCCCCCchhccccCCcc
Q 041082 409 FGSIYKARIQDGMKVAVKVFDLQYERAFKSFDVACDMMK-------------------KLVLEYMPHGSLEKCLYSSNYI 469 (639)
Q Consensus 409 ~g~vy~~~l~~g~~vavK~l~~~~~~~~~~f~~e~~~~~-------------------~Lv~ey~~~gsL~~~l~~~~~~ 469 (639)
.+.+|+.... +..+++|....... ....+..|...++ .+|+||+++.++...
T Consensus 11 ~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~------- 81 (170)
T cd05151 11 TNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE------- 81 (170)
T ss_pred cCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc-------
Confidence 4567877765 66788888643321 1122333443322 356777777665432
Q ss_pred CCHHHHHHHHHHHHHhhhhhhccC--CCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 470 LDIFQRLNIMIDVALALEYLHFGY--STPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 470 l~~~~~~~i~~~ia~~l~~lh~~~--~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
+ .....++.+++++++.||... ...++|||+++.||+++ +..+++.|||.+..
T Consensus 82 -~-~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 82 -D-FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred -c-ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 0 112345678999999999533 23479999999999999 66799999999873
No 471
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.12 E-value=4e-08 Score=104.21 Aligned_cols=120 Identities=31% Similarity=0.310 Sum_probs=80.1
Q ss_pred cEEEEEeCCCCCcccCCcCCCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecc
Q 041082 53 RVTTLNISGLSLTSTIPSELGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQ 132 (639)
Q Consensus 53 ~v~~L~L~~~~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 132 (639)
.+...+.+.|.++ .+..++.-++.|+.|||++|++... +.+..++.|++|||+.|.+....--....+. |+.|.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 4555666666665 2344566677788888888887644 3677777888888888877654333444555 7888888
Q ss_pred cccCccccCccccCCCCCCEEecCCCCCCCCC-------CCCccEEEccCCcc
Q 041082 133 NNFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ-------IPNLENLLLWGNNF 178 (639)
Q Consensus 133 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-------l~~L~~L~L~~N~l 178 (639)
+|.++.. ..+.+|.+|+.||+++|-|.+.. +..|+.|+|.+|.+
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 8877643 24667777888888888776632 45667777777765
No 472
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.08 E-value=7.8e-07 Score=85.16 Aligned_cols=88 Identities=26% Similarity=0.323 Sum_probs=57.9
Q ss_pred CCCCCCEEeccCCcCCc--cCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCcccc-CccccCCCCC
Q 041082 74 NLSSLQTLDLSFNWFSG--SIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTI-HSSIFNLSSL 150 (639)
Q Consensus 74 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L 150 (639)
..+.++.|||.+|.|+. .+-.-+.+|+.|+.|+|+.|.+...|...-.-+.+|++|-|.+..+.-.- ...+..++.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 45678888888888863 23334457788888888888876554332235567888888777765322 2345677777
Q ss_pred CEEecCCCCCC
Q 041082 151 SDLDLSHNNLT 161 (639)
Q Consensus 151 ~~L~Ls~N~l~ 161 (639)
+.|++|.|++.
T Consensus 149 telHmS~N~~r 159 (418)
T KOG2982|consen 149 TELHMSDNSLR 159 (418)
T ss_pred hhhhhccchhh
Confidence 78877777543
No 473
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.01 E-value=8.1e-08 Score=101.95 Aligned_cols=122 Identities=26% Similarity=0.284 Sum_probs=80.0
Q ss_pred CCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEEecC
Q 041082 77 SLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDLS 156 (639)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 156 (639)
.|.+.+.++|.+. ....++.-++.|+.|+|++|+++.. +.+..++.|++|||++|.+.....-...++. |+.|.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 3555566677766 4556666777788888888887654 2677777888888888887743333444444 7778888
Q ss_pred CCCCCCC----CCCCccEEEccCCccCccCC-ccccCCCCCcEEEcccCCC
Q 041082 157 HNNLTDV----QIPNLENLLLWGNNFSGAIP-HFIFNASKLSILELQKNSF 202 (639)
Q Consensus 157 ~N~l~~~----~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l 202 (639)
+|.++.+ ++.+|+.||+++|-+++.-. ..+..+..|+.|+|.+|.+
T Consensus 241 nN~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 8877653 36777777888777654321 1233456677777777765
No 474
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.91 E-value=7.3e-06 Score=78.68 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=46.6
Q ss_pred CCCCCEEECCCCCCCccc-cccccCCcCCcEEEccCCcCCCCC-chhhcCCCCCcEEECCCCcCcccCCc------cccC
Q 041082 273 LTNLTAIYLAGNKLNGSI-PITLCKLQKLQLLSFVDNKLEGPI-PYEFCRLASLYELDLSGNKLSGSIPT------CFGN 344 (639)
Q Consensus 273 l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~------~~~~ 344 (639)
++++..+.+..|.+.... -..+..++.+..|+|+.|+|..-- -..+.++++|..|.+++|.+...+.. .++.
T Consensus 198 Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaR 277 (418)
T KOG2982|consen 198 FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIAR 277 (418)
T ss_pred cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEee
Confidence 445555666666554322 123344555556677777664321 13456677788888888777643321 2456
Q ss_pred CCCCCEEeCC
Q 041082 345 QTSLRILSLD 354 (639)
Q Consensus 345 l~~L~~L~l~ 354 (639)
++++++|+=+
T Consensus 278 L~~v~vLNGs 287 (418)
T KOG2982|consen 278 LTKVQVLNGS 287 (418)
T ss_pred ccceEEecCc
Confidence 7778887544
No 475
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.91 E-value=2.7e-05 Score=77.73 Aligned_cols=50 Identities=28% Similarity=0.387 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceee--cCCcc--eeeccccccc
Q 041082 472 IFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLL--GNNMV--AHLSDFGMAK 524 (639)
Q Consensus 472 ~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill--~~~~~--~~i~dfgla~ 524 (639)
...+.-|..|..+|+.||| ..+|.|||+|+.|||+ |+|.. ..|+|||+.-
T Consensus 340 ~r~~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 340 YRTGRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred hHHHHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 3334556778899999999 8889999999999998 44544 4689999763
No 476
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.91 E-value=2.2e-05 Score=85.05 Aligned_cols=76 Identities=17% Similarity=0.126 Sum_probs=49.7
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc----ceeeccccccc
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM----VAHLSDFGMAK 524 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~----~~~i~dfgla~ 524 (639)
|||||+.++.+.+.-.-.....+ +..++...++ .|++.-...+++|+|+||.||+++.++ ..++.|||++.
T Consensus 238 LvmE~i~G~~l~d~~~l~~~g~d---~~~la~~~v~--~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg 312 (537)
T PRK04750 238 MVMERMYGIPVSDVAALRAAGTD---MKLLAERGVE--VFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVG 312 (537)
T ss_pred EEEeeecCccHHhHHHHHhcCCC---HHHHHHHHHH--HHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEE
Confidence 78999999988763210111122 2223332222 233322356799999999999999887 89999999998
Q ss_pred ccccc
Q 041082 525 LLLKE 529 (639)
Q Consensus 525 ~~~~~ 529 (639)
.+.+.
T Consensus 313 ~l~~~ 317 (537)
T PRK04750 313 SLNKE 317 (537)
T ss_pred ECCHH
Confidence 77654
No 477
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.82 E-value=1.6e-05 Score=54.64 Aligned_cols=36 Identities=42% Similarity=0.586 Sum_probs=17.3
Q ss_pred ccceeeccCCcCCCCCCccccCCCCCcEEecccccCc
Q 041082 101 SLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLT 137 (639)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 137 (639)
+|++|++++|+++. +|..+++|++|++|++++|+++
T Consensus 2 ~L~~L~l~~N~i~~-l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITD-LPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SS-HGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcc-cCchHhCCCCCCEEEecCCCCC
Confidence 45555555555542 3434555555555555555554
No 478
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.81 E-value=2.1e-06 Score=72.93 Aligned_cols=86 Identities=23% Similarity=0.334 Sum_probs=43.8
Q ss_pred CCCCCCEEECCCCCCCccccccc-cCCcCCcEEEccCCcCCCCCchhhcCCCCCcEEECCCCcCcccCCccccCCCCCCE
Q 041082 272 NLTNLTAIYLAGNKLNGSIPITL-CKLQKLQLLSFVDNKLEGPIPYEFCRLASLYELDLSGNKLSGSIPTCFGNQTSLRI 350 (639)
Q Consensus 272 ~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 350 (639)
....|+..+|++|.+.. .|..| ...+.++.|++++|+++ .+|..+..++.|+.|+++.|.+. ..|..+..+.++-+
T Consensus 51 ~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~ 127 (177)
T KOG4579|consen 51 KGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDM 127 (177)
T ss_pred CCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHH
Confidence 33445555666666653 23222 23335555666666655 33444555566666666665555 33444444555555
Q ss_pred EeCCCCcCcc
Q 041082 351 LSLDSNKLIS 360 (639)
Q Consensus 351 L~l~~N~l~~ 360 (639)
|+..+|.+..
T Consensus 128 Lds~~na~~e 137 (177)
T KOG4579|consen 128 LDSPENARAE 137 (177)
T ss_pred hcCCCCcccc
Confidence 5555555443
No 479
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.76 E-value=1.8e-05 Score=80.98 Aligned_cols=78 Identities=46% Similarity=0.591 Sum_probs=64.7
Q ss_pred hhhhhcCCCCCchhccccCC--ccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCc-ceeeccccccc
Q 041082 448 KLVLEYMPHGSLEKCLYSSN--YILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNM-VAHLSDFGMAK 524 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~-~~~i~dfgla~ 524 (639)
.++++|+.++++.+.+.... ..+.......+..+++.+++|+| ..+++|||+||.||+++... .+++.|||+++
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 36788888888886554332 25777888999999999999999 56699999999999999988 79999999998
Q ss_pred cccc
Q 041082 525 LLLK 528 (639)
Q Consensus 525 ~~~~ 528 (639)
....
T Consensus 151 ~~~~ 154 (384)
T COG0515 151 LLPD 154 (384)
T ss_pred ecCC
Confidence 5543
No 480
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.74 E-value=2.3e-05 Score=53.86 Aligned_cols=38 Identities=29% Similarity=0.494 Sum_probs=29.0
Q ss_pred CCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCC
Q 041082 76 SSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFG 114 (639)
Q Consensus 76 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 114 (639)
++|++|++++|+|+ .+|..+.+|++|+.|++++|.++.
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSB
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCC
Confidence 46888888888888 567678888888888888888763
No 481
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.71 E-value=5e-05 Score=70.80 Aligned_cols=72 Identities=21% Similarity=0.242 Sum_probs=44.8
Q ss_pred hhhhcCC--CCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 449 LVLEYMP--HGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 449 Lv~ey~~--~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+||||++ +..+..+... .++......++.++.+.+..+++ ..+++|||+.+.||+++++ .+.+.|||-|...
T Consensus 83 ivME~I~~~G~~~~~l~~~---~~~~~~~~~~~~~il~~~~~~~~--~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 83 IVMEYIGEDGVPLPRLKDV---DLSPEEPKELLEEILEEIIKMLH--KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp EEEE--EETTEEGGCHHHC---GGGGSTHHHHHHHHHHHHHHHHH--CTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred EEEEecCCCccchhhHHhc---cccchhHHHHHHHHHHHHHHHHH--hcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence 7899998 4344332211 11123345566777776666543 5689999999999999988 9999999988654
No 482
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.70 E-value=6.8e-05 Score=68.34 Aligned_cols=58 Identities=26% Similarity=0.304 Sum_probs=25.9
Q ss_pred CCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccC
Q 041082 77 SLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFL 136 (639)
Q Consensus 77 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 136 (639)
+...+||++|.+... +.|..++.|.+|.|++|.|+..-|.--.-+++|+.|.|.+|.|
T Consensus 43 ~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi 100 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSI 100 (233)
T ss_pred ccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcch
Confidence 344555555555321 2334444444444444444443333333334444444444444
No 483
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.70 E-value=2.8e-05 Score=72.81 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=53.5
Q ss_pred hhhhcCCCCCchh-ccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 449 LVLEYMPHGSLEK-CLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 449 Lv~ey~~~gsL~~-~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
+||||+.++.+.. .+.. ..++..+..++..++..++.+++| ..+|+|||+++.||+++ ++.+.+.|||.|...
T Consensus 101 lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H--~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 101 LVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYK--ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred EEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHH--hCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 7899998754432 2221 123444456778899999999943 55899999999999997 467999999987654
No 484
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=97.69 E-value=4e-05 Score=85.86 Aligned_cols=205 Identities=23% Similarity=0.278 Sum_probs=117.9
Q ss_pred CcCcceEEEecCCceeeeEEechhh-hhhhhhHHHHHHH----------------------HHhhhhhcCCCCCchhccc
Q 041082 408 GFGSIYKARIQDGMKVAVKVFDLQY-ERAFKSFDVACDM----------------------MKKLVLEYMPHGSLEKCLY 464 (639)
Q Consensus 408 g~g~vy~~~l~~g~~vavK~l~~~~-~~~~~~f~~e~~~----------------------~~~Lv~ey~~~gsL~~~l~ 464 (639)
.|-.+.++.-+.|. +.||++-... .-....|...++. ..+||-+|+.+ +|++.+.
T Consensus 35 RFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlS 112 (1431)
T KOG1240|consen 35 RFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLS 112 (1431)
T ss_pred hhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhc
Confidence 34556677777775 7788875433 2223444443333 22466677765 7888775
Q ss_pred cCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc--cccCCC-cccccccc-
Q 041082 465 SSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL--LKEDQS-FTQNTNTC- 540 (639)
Q Consensus 465 ~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~--~~~~~~-~~~~~~~~- 540 (639)
- +.-+......=||.|+..|+.-.| ..+|.|||||++|||++.-.=+.++||.--+.. .++.-+ .+....|.
T Consensus 113 T-RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSr 188 (1431)
T KOG1240|consen 113 T-RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSR 188 (1431)
T ss_pred c-chHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCC
Confidence 3 223445556668999999999999 789999999999999999888999999533322 111110 11000000
Q ss_pred -------ccccc---c-------CC-CCCCCccCCCccchHHHHHhhCC---------CCcceeeeccccccccccccch
Q 041082 541 -------HHRIY---G-------TR-RNPQMNFFSGEMTLKSWVNDLLP---------ISVMEVVDVNLLSMEDKYFTTK 593 (639)
Q Consensus 541 -------~~dvy---G-------tg-~~p~~~~~~~~~~l~~~~~~~~~---------~~~~~~~d~~l~~~~~~~~~~~ 593 (639)
+..-| | .+ -.|..|+|+-|..+.|......| .+..+-.|++-.- +..
T Consensus 189 RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~L------e~I 262 (1431)
T KOG1240|consen 189 RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLL------EKI 262 (1431)
T ss_pred ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHH------HhC
Confidence 11111 1 11 34566667666555544332111 1111122222110 000
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 041082 594 KQCLSFVFNLAMECTAESPKQRINAKESVTRLL 626 (639)
Q Consensus 594 ~~~~~~~~~l~~~C~~~~p~~RP~m~~v~~~l~ 626 (639)
+-..+-++.+..++.+|++|-++.+.++.=.
T Consensus 263 --ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 263 --EDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred --cCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 0013556778899999999999999987633
No 485
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.69 E-value=2.3e-05 Score=76.44 Aligned_cols=69 Identities=28% Similarity=0.424 Sum_probs=55.6
Q ss_pred hhhhcCCCCCchhccccC---CccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeec
Q 041082 449 LVLEYMPHGSLEKCLYSS---NYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLS 518 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~ 518 (639)
++.|||+.|++..+|++- ...+....-.+++.+|..||.||| .|.|+|+|+++...-|....++-+|++
T Consensus 149 Fiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh-s~~PpiihgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 149 FITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH-SCDPPIIHGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred EEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh-ccCCccccCCcchhheeecCCceEEec
Confidence 567999999999999761 122322333568999999999999 689999999999999999988877775
No 486
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.69 E-value=3.8e-06 Score=71.47 Aligned_cols=107 Identities=26% Similarity=0.317 Sum_probs=69.2
Q ss_pred EEEEEeCCCCCcccCCc---CCCCCCCCCEEeccCCcCCccCCccccCC-cccceeeccCCcCCCCCCccccCCCCCcEE
Q 041082 54 VTTLNISGLSLTSTIPS---ELGNLSSLQTLDLSFNWFSGSIPSSIFNM-SSLLSIYFNNNTLFGEIPEELGNLAELETL 129 (639)
Q Consensus 54 v~~L~L~~~~l~~~~p~---~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 129 (639)
...++|++..+. .+++ .+....+|+..+|++|.+. ..|..|... +.++.|+|++|.+. .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 344666666553 2332 3445556666777777777 345555433 46777777777775 467777777777777
Q ss_pred ecccccCccccCccccCCCCCCEEecCCCCCCCCC
Q 041082 130 WLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDVQ 164 (639)
Q Consensus 130 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 164 (639)
+++.|.+. ..|..+..|.+|-+|+..+|.+..+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid 139 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEID 139 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccccCc
Confidence 77777776 45666666777777777777766543
No 487
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=97.64 E-value=2.5e-05 Score=81.09 Aligned_cols=76 Identities=26% Similarity=0.383 Sum_probs=64.4
Q ss_pred hhhhhcCCCCCchhcccc--CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 448 KLVLEYMPHGSLEKCLYS--SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 448 ~Lv~ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++.|+++...+|.+|+.+ .....+|.....++.+++.|++| ...+|||+||.||....+...||+|||+.-.
T Consensus 332 yI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 332 YIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhheee
Confidence 467888999999999964 23457888899999999999999 4589999999999999999999999999765
Q ss_pred cccc
Q 041082 526 LLKE 529 (639)
Q Consensus 526 ~~~~ 529 (639)
....
T Consensus 406 ~~~~ 409 (516)
T KOG1033|consen 406 QDKD 409 (516)
T ss_pred cccC
Confidence 5433
No 488
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.61 E-value=3.2e-05 Score=70.06 Aligned_cols=65 Identities=29% Similarity=0.523 Sum_probs=52.9
Q ss_pred hhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccc
Q 041082 449 LVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKL 525 (639)
Q Consensus 449 Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~ 525 (639)
++|||+++-.|.+.+... +..++..|-+-+.-|| ..+|+|+|+.++||.+.++. +.+.||||+.+
T Consensus 76 I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 76 IVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 688999887777666432 4566667777788899 77899999999999998776 88999999985
No 489
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.55 E-value=0.00034 Score=72.24 Aligned_cols=88 Identities=16% Similarity=0.211 Sum_probs=44.7
Q ss_pred CCCCCCEEeccCCcCCccCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccc-cCccccCccccCCCCCCE
Q 041082 74 NLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNN-FLTGTIHSSIFNLSSLSD 152 (639)
Q Consensus 74 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~ 152 (639)
.+.++++|++++|.++ .+| .+ ..+|+.|.++++.-...+|+.+. ++|+.|++++| .+. .+|. +|+.
T Consensus 50 ~~~~l~~L~Is~c~L~-sLP-~L--P~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~-sLP~------sLe~ 116 (426)
T PRK15386 50 EARASGRLYIKDCDIE-SLP-VL--PNELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEIS-GLPE------SVRS 116 (426)
T ss_pred HhcCCCEEEeCCCCCc-ccC-CC--CCCCcEEEccCCCCcccCCchhh--hhhhheEccCccccc-cccc------ccce
Confidence 3456666666666655 344 11 13466666665433344554442 46677777766 333 3332 3555
Q ss_pred EecCCCCCCCCC-C-CCccEEEcc
Q 041082 153 LDLSHNNLTDVQ-I-PNLENLLLW 174 (639)
Q Consensus 153 L~Ls~N~l~~~~-l-~~L~~L~L~ 174 (639)
|+++.|.+..+. + ++|+.|.+.
T Consensus 117 L~L~~n~~~~L~~LPssLk~L~I~ 140 (426)
T PRK15386 117 LEIKGSATDSIKNVPNGLTSLSIN 140 (426)
T ss_pred EEeCCCCCcccccCcchHhheecc
Confidence 555555443321 1 345555543
No 490
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=97.50 E-value=0.00038 Score=67.28 Aligned_cols=115 Identities=19% Similarity=0.165 Sum_probs=77.2
Q ss_pred cCcceEEEecCCceeeeEEechhhh-hhhhhHHHHHHHHH-------------------------hhhhhcCCCCCchhc
Q 041082 409 FGSIYKARIQDGMKVAVKVFDLQYE-RAFKSFDVACDMMK-------------------------KLVLEYMPHGSLEKC 462 (639)
Q Consensus 409 ~g~vy~~~l~~g~~vavK~l~~~~~-~~~~~f~~e~~~~~-------------------------~Lv~ey~~~gsL~~~ 462 (639)
.+.+|+....+|..+++|....... .....+..|.+.++ .+||||++++++.+.
T Consensus 11 ~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~ 90 (223)
T cd05154 11 SNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDR 90 (223)
T ss_pred cceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCC
Confidence 4567887776667888887654321 11233444444422 256677776666554
Q ss_pred cccCCccCCHHHHHHHHHHHHHhhhhhhcc--------------------------------------------------
Q 041082 463 LYSSNYILDIFQRLNIMIDVALALEYLHFG-------------------------------------------------- 492 (639)
Q Consensus 463 l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~-------------------------------------------------- 492 (639)
+.. ..++..++..++.+++++++++|..
T Consensus 91 ~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (223)
T cd05154 91 LLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHL 168 (223)
T ss_pred CCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhC
Confidence 421 2367777888889999999998842
Q ss_pred ---CCCCeEeecCCCCceeecC--Ccceeecccccccc
Q 041082 493 ---YSTPIIHCDLKLSNVLLGN--NMVAHLSDFGMAKL 525 (639)
Q Consensus 493 ---~~~~i~h~dlk~~nill~~--~~~~~i~dfgla~~ 525 (639)
....++|+|+.+.||+++. +..+.|.||+.+..
T Consensus 169 ~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 169 PADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred CCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1245799999999999998 66788999988764
No 491
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.47 E-value=0.0002 Score=65.42 Aligned_cols=98 Identities=29% Similarity=0.342 Sum_probs=61.1
Q ss_pred ccceeeccCCcCCCCCCccccCCCCCcEEecccccCccccCccccCCCCCCEEecCCCCCCCC-------CCCCccEEEc
Q 041082 101 SLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTGTIHSSIFNLSSLSDLDLSHNNLTDV-------QIPNLENLLL 173 (639)
Q Consensus 101 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-------~l~~L~~L~L 173 (639)
+...+||++|.+.. -+.|..++.|.+|.|++|+|+.+-|.--.-+++|+.|.|.+|+|..+ .+|.|++|.+
T Consensus 43 ~~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltl 120 (233)
T KOG1644|consen 43 QFDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTL 120 (233)
T ss_pred ccceecccccchhh--cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeee
Confidence 44566777776632 23466677777777777777766665445566677777777766543 2567777777
Q ss_pred cCCccCccCC---ccccCCCCCcEEEcccC
Q 041082 174 WGNNFSGAIP---HFIFNASKLSILELQKN 200 (639)
Q Consensus 174 ~~N~l~~~~p---~~~~~l~~L~~L~L~~N 200 (639)
-+|..+..-- ..+..+++|++||++.-
T Consensus 121 l~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 121 LGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred cCCchhcccCceeEEEEecCcceEeehhhh
Confidence 7776642211 23445677788777653
No 492
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.46 E-value=7.7e-05 Score=70.91 Aligned_cols=84 Identities=20% Similarity=0.281 Sum_probs=45.1
Q ss_pred ccCCCCCCEEecCCCCCCCC----------CCCCccEEEccCCcc---CccCC-------ccccCCCCCcEEEcccCCCc
Q 041082 144 IFNLSSLSDLDLSHNNLTDV----------QIPNLENLLLWGNNF---SGAIP-------HFIFNASKLSILELQKNSFF 203 (639)
Q Consensus 144 ~~~l~~L~~L~Ls~N~l~~~----------~l~~L~~L~L~~N~l---~~~~p-------~~~~~l~~L~~L~L~~N~l~ 203 (639)
+..+..++.++||+|.|..- .-.+|+..+++.--. ...+| ..+..+++|+..+||+|.|.
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 34467788888888887641 123455544443211 01111 22345666667777766665
Q ss_pred ccCcc----ccCCCCCCCEEEccCCCCC
Q 041082 204 DLIPN----TFGNLINLKRLNLYDNYLT 227 (639)
Q Consensus 204 ~~~p~----~~~~l~~L~~L~Ls~N~l~ 227 (639)
...|. .+++-+.|++|.+++|.+.
T Consensus 106 ~~~~e~L~d~is~~t~l~HL~l~NnGlG 133 (388)
T COG5238 106 SEFPEELGDLISSSTDLVHLKLNNNGLG 133 (388)
T ss_pred cccchHHHHHHhcCCCceeEEeecCCCC
Confidence 44333 2344556666666666554
No 493
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=97.40 E-value=9.2e-06 Score=78.02 Aligned_cols=151 Identities=22% Similarity=0.187 Sum_probs=105.3
Q ss_pred CCCCEEeccCCcCCc-cCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEeccccc-Cccc-cCccccCCCCCCE
Q 041082 76 SSLQTLDLSFNWFSG-SIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNF-LTGT-IHSSIFNLSSLSD 152 (639)
Q Consensus 76 ~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~-~p~~~~~l~~L~~ 152 (639)
+.||+||||+..|+. .+-.-+..+.+|+.|.|.++++...+-..+..-.+|+.|+|+.+. ++.. ..--+.+++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 358999999988863 223345678899999999999998888889999999999999864 3211 1123678999999
Q ss_pred EecCCCCCCCCC--------CCCccEEEccCCcc---CccCCccccCCCCCcEEEcccCCC-cccCccccCCCCCCCEEE
Q 041082 153 LDLSHNNLTDVQ--------IPNLENLLLWGNNF---SGAIPHFIFNASKLSILELQKNSF-FDLIPNTFGNLINLKRLN 220 (639)
Q Consensus 153 L~Ls~N~l~~~~--------l~~L~~L~L~~N~l---~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~ 220 (639)
|+|+.+.++.-. -++|+.|+|++..= ..-+......+++|..|||++|.. +.-.-..|..++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 999998776411 35777888876431 111222234678888888888753 322223466788888888
Q ss_pred ccCCCC
Q 041082 221 LYDNYL 226 (639)
Q Consensus 221 Ls~N~l 226 (639)
++.+..
T Consensus 345 lsRCY~ 350 (419)
T KOG2120|consen 345 LSRCYD 350 (419)
T ss_pred hhhhcC
Confidence 888754
No 494
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.39 E-value=0.00012 Score=69.78 Aligned_cols=87 Identities=18% Similarity=0.227 Sum_probs=53.1
Q ss_pred CCCCCCCCEEeccCCcCCccCCccccCCcccceeeccCC--cCCCCCCccccCCCCCcEEecccccCccccCcc---ccC
Q 041082 72 LGNLSSLQTLDLSFNWFSGSIPSSIFNMSSLLSIYFNNN--TLFGEIPEELGNLAELETLWLQNNFLTGTIHSS---IFN 146 (639)
Q Consensus 72 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N--~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~ 146 (639)
...+..|+.|.+.+..++.. ..|..|++|+.|.++.| ...+.++...-.+++|++|+|++|++.- +++ +..
T Consensus 39 ~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~ 114 (260)
T KOG2739|consen 39 TDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKE 114 (260)
T ss_pred cccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhh
Confidence 33445555666655555432 34556667777777777 5555555555566888888888887762 233 345
Q ss_pred CCCCCEEecCCCCCCC
Q 041082 147 LSSLSDLDLSHNNLTD 162 (639)
Q Consensus 147 l~~L~~L~Ls~N~l~~ 162 (639)
+.+|..|++.++..+.
T Consensus 115 l~nL~~Ldl~n~~~~~ 130 (260)
T KOG2739|consen 115 LENLKSLDLFNCSVTN 130 (260)
T ss_pred hcchhhhhcccCCccc
Confidence 5566677777776554
No 495
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.38 E-value=0.00018 Score=68.51 Aligned_cols=195 Identities=24% Similarity=0.260 Sum_probs=96.6
Q ss_pred CCCccEEEccCCccCccCCcc----ccCCCCCcEEEcccCCCcccCcccc-------------CCCCCCCEEEccCCCCC
Q 041082 165 IPNLENLLLWGNNFSGAIPHF----IFNASKLSILELQKNSFFDLIPNTF-------------GNLINLKRLNLYDNYLT 227 (639)
Q Consensus 165 l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~~~-------------~~l~~L~~L~Ls~N~l~ 227 (639)
+|.|+..+||+|.|....|.. +...+.|.+|.+++|.+.-....-+ .+-|.|+++....|++.
T Consensus 91 cp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle 170 (388)
T COG5238 91 CPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE 170 (388)
T ss_pred CCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc
Confidence 456666666666665555443 4456778888888876532211111 23456666666666654
Q ss_pred CCCCcchhhccccCCcchhhhccCccEEEeecCccccccchhhcCCCCCCEEECCCCCCCcc-----ccccccCCcCCcE
Q 041082 228 SSTPELSFLYSLSNCKYLEQSSQSLEVFSMFNCNISGGILEEISNLTNLTAIYLAGNKLNGS-----IPITLCKLQKLQL 302 (639)
Q Consensus 228 ~~~~~~~~~~~l~~l~~l~~~~~~l~~l~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~ 302 (639)
.-+.... . .-+..-.+|+.+.+..|.|... +-..+..+++|+.
T Consensus 171 ngs~~~~-----------a---------------------~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~Lev 218 (388)
T COG5238 171 NGSKELS-----------A---------------------ALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEV 218 (388)
T ss_pred cCcHHHH-----------H---------------------HHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCccee
Confidence 3211000 0 0001112344444444443311 0012234556666
Q ss_pred EEccCCcCCCC----CchhhcCCCCCcEEECCCCcCcccCCcc----cc--CCCCCCEEeCCCCcCcccchhhhhcCCCC
Q 041082 303 LSFVDNKLEGP----IPYEFCRLASLYELDLSGNKLSGSIPTC----FG--NQTSLRILSLDSNKLISIIPSTLWNLKDI 372 (639)
Q Consensus 303 L~l~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 372 (639)
||++.|-++-. +..+++..+.|+.|.+..|-++..-..+ |. ..++|..|-..+|...+.+
T Consensus 219 LDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~---------- 288 (388)
T COG5238 219 LDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGI---------- 288 (388)
T ss_pred eeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCce----------
Confidence 67666666422 2234556666777777777665332211 11 2356777777888765432
Q ss_pred cEEEcccCCCCCCCccccccccccccccccCCCCCC
Q 041082 373 LYLNLSSNFFISPLPLEIGNLKVLVGIDLSMNNFSG 408 (639)
Q Consensus 373 ~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 408 (639)
.++.+-|.+ .-..++-|..+.+.+|.|..
T Consensus 289 -i~~~~l~~~------e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 289 -ILDISLNEF------EQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred -eeeechhhh------hhcccHHHHHHHHccCcchh
Confidence 122232322 12345556666666777653
No 496
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.36 E-value=0.0007 Score=69.98 Aligned_cols=16 Identities=6% Similarity=0.148 Sum_probs=10.3
Q ss_pred CCCCCcEEecccccCc
Q 041082 122 NLAELETLWLQNNFLT 137 (639)
Q Consensus 122 ~l~~L~~L~L~~N~l~ 137 (639)
.+.+++.|++++|.++
T Consensus 50 ~~~~l~~L~Is~c~L~ 65 (426)
T PRK15386 50 EARASGRLYIKDCDIE 65 (426)
T ss_pred HhcCCCEEEeCCCCCc
Confidence 3466667777776665
No 497
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.29 E-value=0.00018 Score=71.35 Aligned_cols=74 Identities=20% Similarity=0.204 Sum_probs=56.9
Q ss_pred hhhhcCCCC-Cchhcccc-CCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecC-------Ccceeecc
Q 041082 449 LVLEYMPHG-SLEKCLYS-SNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGN-------NMVAHLSD 519 (639)
Q Consensus 449 Lv~ey~~~g-sL~~~l~~-~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~-------~~~~~i~d 519 (639)
+|+||+++- +|.+++.. .....+...+..+...+|+.++-|| ..+|+|+|++++|||++. +..+.+.|
T Consensus 112 LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 677888765 67666532 1122344556789999999999999 778999999999999985 57789999
Q ss_pred cccccc
Q 041082 520 FGMAKL 525 (639)
Q Consensus 520 fgla~~ 525 (639)
|+.++.
T Consensus 189 l~r~~~ 194 (268)
T PRK15123 189 LHRAQI 194 (268)
T ss_pred CCcccc
Confidence 998764
No 498
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.13 E-value=0.00076 Score=71.86 Aligned_cols=79 Identities=34% Similarity=0.409 Sum_probs=62.0
Q ss_pred HhhhhhcCCCCCchhccccCCccCCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeeccccccccc
Q 041082 447 KKLVLEYMPHGSLEKCLYSSNYILDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLL 526 (639)
Q Consensus 447 ~~Lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~ 526 (639)
.+++.+|..+|.+...+..+.. ++...-.......|-|++++| ...|+|||+|++||++|.+|.+++.|||+++..
T Consensus 72 l~l~ld~~rgg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 72 LYLILDFLRGGDLFTRLSKEVM-FDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEA 147 (612)
T ss_pred hhHhhhhcccchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHh
Confidence 3578899999999888765332 333333334455678999999 888999999999999999999999999999976
Q ss_pred ccc
Q 041082 527 LKE 529 (639)
Q Consensus 527 ~~~ 529 (639)
.+.
T Consensus 148 v~~ 150 (612)
T KOG0603|consen 148 VKE 150 (612)
T ss_pred Hhh
Confidence 543
No 499
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.11 E-value=0.00041 Score=68.74 Aligned_cols=55 Identities=27% Similarity=0.338 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHHhhhhhhccCCCCeEeecCCCCceeecCCcceeecccccccccc
Q 041082 470 LDIFQRLNIMIDVALALEYLHFGYSTPIIHCDLKLSNVLLGNNMVAHLSDFGMAKLLL 527 (639)
Q Consensus 470 l~~~~~~~i~~~ia~~l~~lh~~~~~~i~h~dlk~~nill~~~~~~~i~dfgla~~~~ 527 (639)
+....|+.+..++.+.++++| ..+++|+|||++|++++.++.+.++||+-..-.+
T Consensus 142 l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g 196 (288)
T PF14531_consen 142 LAFAARLSLTVQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAG 196 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETT
T ss_pred hHHHHHHHHHHHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecC
Confidence 445678888899999999999 6679999999999999999999999998765443
No 500
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.08 E-value=0.00019 Score=80.37 Aligned_cols=84 Identities=23% Similarity=0.277 Sum_probs=40.1
Q ss_pred CCCCCCEEeccCCcCCc-cCCccccCCcccceeeccCCcCCCCCCccccCCCCCcEEecccccCcc-ccCccccCCCCCC
Q 041082 74 NLSSLQTLDLSFNWFSG-SIPSSIFNMSSLLSIYFNNNTLFGEIPEELGNLAELETLWLQNNFLTG-TIHSSIFNLSSLS 151 (639)
Q Consensus 74 ~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~ 151 (639)
-||+|++|.+++=.+.. ..-.-..+.++|..||+|+.+++.. ..+++|++|+.|.+.+=.+.. ..-..+++|++|+
T Consensus 146 ~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~ 223 (699)
T KOG3665|consen 146 MLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLR 223 (699)
T ss_pred hCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCC
Confidence 44555666555544321 1112233555556666665555433 445555666555554443321 1112345555566
Q ss_pred EEecCCCC
Q 041082 152 DLDLSHNN 159 (639)
Q Consensus 152 ~L~Ls~N~ 159 (639)
.||+|...
T Consensus 224 vLDIS~~~ 231 (699)
T KOG3665|consen 224 VLDISRDK 231 (699)
T ss_pred eeeccccc
Confidence 66555443
Done!